F019550

General Info

Members Datasets Scaffolds Average Seq Length
103 80 206 832

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100036147|Ga0070698_1000361472
Length 919
Sequence MPDWRSYVRERLRLPGLRAEREAEIVEDLAQHLEDLYLAALKRGASASQAEAEAQRDVQDWDALAREITRSDTRHRREIDQRLLDSLESGAGAPQGSPRTPTAVDTGRRSLASRIALIATQVAADLLHAIRLLRKNPGFTAAVLLTLAFGIGANAAVFTILNTVLLRPLPYADPERLVVIWESNPKRGWPQFAVSQPNFLDWREQSVSFERLAASNPRPLNLTVGGEAERIPGMAVTHDFFPMLGVRPVLGRGILPEEDAAGQGERVVLMTRGLWQRRFGGDPAIVGRTISLNDAPHTVIGVVPDFYWRPYELFVPLRPDPAEARDDHRLSVYGKLKPGVGLRQAQTELAGVAERLGRAYPDSNGGWTVNLDSFYDWIVPQSSRRGLYVLLAAVALVLLIACANVANLLLARSAARRREIAIRAALGASRARLVRQFLVESLLFAVVGGGLGLLLAHWGIDALGVAAGNAVPRADEISLDHHVLWFTLGVSVFTAILFGLAPALHATRVDFHGMLKEGASGDASRQRARSALVVAEVALSLVLLVGVGLLLRSLAALLGVHPGYEARSLLTASINLPDQRYSTYKEFLAFHNRLLERLRETPDVNSVAVSSALPMDGNGTAMEVLVDGAPVSADGQHPSAQWRLVSPGYFRTMGIPIRRGRDLNERDVAPEPRELRGVVISEALAQRCWPGQDPIGRQFRPWATSNPPVTVVGVAGDVRLFALNETPEPVVYMNFTYGFWNPMQIVMRTARDPRDFADILRGEVRAMDPGVPVSQIRTMDDLIEQSTAPRRFTMTLFTIFATLAMLLAGIGLFALMAYHVAQRTHDIGVRLALGARQRDIFGLIVGRAMLLTSFGIAAGVAGALALTRMMSSMLFGVGARDPLTLAVTVLLLALVALAASWLPAHRAARVDPMTALRCE

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
52 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
55 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
56 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
57 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
58 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
59 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
68 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
74 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
76 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
77 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
78 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
79 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
80 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.97
Nodule 0
Rhizoplane 0
Rhizosphere 94.17
Stem 0
Stem Tuber 0
Unclassified 5.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100036147 3300005471 Bacteria 5106
2 Ga0065715_10111858 3300005293 Bacteria 2556
3 Ga0065707_10090225 3300005295 Bacteria 4185
4 Ga0070690_100023123 3300005330 Bacteria 3810
5 Ga0070680_100081982 3300005336 Unclassified 2661
6 Ga0070689_100057222 3300005340 Bacteria 3026
7 Ga0070661_100006029 3300005344 Bacteria 8337
8 Ga0070675_100006418 3300005354 Bacteria 9025
9 Ga0070711_100000038 3300005439 Bacteria 85684
10 Ga0070705_100000003 3300005440 Bacteria 134946
11 Ga0070700_100048351 3300005441 Bacteria 2636
12 Ga0070694_100003680 3300005444 Bacteria 9146
13 Ga0070694_100037994 3300005444 Unclassified 3196
14 Ga0070707_100000064 3300005468 Bacteria 96008
15 Ga0070707_100012432 3300005468 Bacteria 7951
16 Ga0070707_100041354 3300005468 Bacteria 4411
17 Ga0070707_100043258 3300005468 Bacteria 4311
18 Ga0070699_100000012 3300005518 Bacteria 246521
19 Ga0070699_100002390 3300005518 Bacteria 16837
20 Ga0070679_100034076 3300005530 Bacteria 5045
21 Ga0070697_100033441 3300005536 Bacteria 4141
22 Ga0070686_100025933 3300005544 Bacteria 3531
23 Ga0070695_100001967 3300005545 Bacteria 11671
24 Ga0070696_100026672 3300005546 Bacteria 3931
25 Ga0070704_100006379 3300005549 Bacteria 6953
26 Ga0070704_100012682 3300005549 Bacteria 5214
27 Ga0070704_100016212 3300005549 Bacteria 4705
28 Ga0068854_100042627 3300005578 Bacteria 3213
29 Ga0068856_100008115 3300005614 Bacteria 10249
30 Ga0068852_100009976 3300005616 Bacteria 7067
31 Ga0081539_10005381 3300005985 Bacteria 13100
32 Ga0075362_10005667 3300006177 Bacteria 4591
33 Ga0075430_100066474 3300006846 Bacteria 3028
34 Ga0075431_100011455 3300006847 Bacteria 8935
35 Ga0075431_100016673 3300006847 Bacteria 7458
36 Ga0075434_100017495 3300006871 Bacteria 6909
37 Ga0111539_10025770 3300009094 Bacteria 7201
38 Ga0111539_10033386 3300009094 Bacteria 6247
39 Ga0111539_10044297 3300009094 Bacteria 5331
40 Ga0114129_10000235 3300009147 Bacteria 61785
41 Ga0114129_10036795 3300009147 Bacteria 6911
42 Ga0114129_10037872 3300009147 Bacteria 6805
43 Ga0114129_10078321 3300009147 Unclassified 4598
44 Ga0105248_10137150 3300009177 Bacteria 2760
45 Ga0157378_10026137 3300013297 Bacteria 5146
46 Ga0157372_10007939 3300013307 Bacteria 11280
47 Ga0157380_10016538 3300014326 Bacteria 5441
48 Ga0157379_10056217 3300014968 Bacteria 3516
49 Ga0213876_10000109 3300021384 Bacteria 90784
50 Ga0213875_10005830 3300021388 Bacteria 6553
51 Ga0228598_1004085 3300024227 Unclassified 3102
52 Ga0207707_10031833 3300025912 Unclassified 4617
53 Ga0207660_10000530 3300025917 Bacteria 25497
54 Ga0207660_10027492 3300025917 Bacteria 3882
55 Ga0207657_10028039 3300025919 Bacteria 5146
56 Ga0207649_10006633 3300025920 Bacteria 6290
57 Ga0207652_10003940 3300025921 Bacteria 12142
58 Ga0207646_10000207 3300025922 Bacteria 80239
59 Ga0207646_10019407 3300025922 Bacteria 6320
60 Ga0207646_10066830 3300025922 Bacteria 3209
61 Ga0207703_10027898 3300026035 Bacteria 4446
62 Ga0207708_10002468 3300026075 Bacteria 13597
63 Ga0207702_10004917 3300026078 Bacteria 11749
64 Ga0207675_100024424 3300026118 Bacteria 5620
65 Ga0207428_10006210 3300027907 Bacteria 11039
66 Ga0207428_10007465 3300027907 Bacteria 9966
67 Ga0265338_10000716 3300028800 Bacteria 56718
68 Ga0307508_10010262 3300031616 Bacteria 8571
69 Ga0307407_10000656 3300031903 Bacteria 11095
70 Ga0307407_10001591 3300031903 Bacteria 8371
71 Ga0307416_100042457 3300032002 Bacteria 3550
72 Ga0307415_100002030 3300032126 Bacteria 9980
73 Ga0373929_0000580 3300035085 Bacteria 7045
74 Ga0373941_0001978 3300035115 Bacteria 4440
75 Ga0373960_0000416 3300035121 Bacteria 8338
76 Ga0373961_0001840 3300035241 Bacteria 5799
77 Ga0373962_0001062 3300035242 Bacteria 6391
78 Ga0373937_0002160 3300036401 Bacteria 16472
79 Ga0373937_0006294 3300036401 Bacteria 10237
80 Ga0373937_0078899 3300036401 Bacteria 3043
81 Ga0395898_0042645 3300037466 Bacteria 4475
82 Ga0436364_1118825 3300037853 Bacteria 26943
83 Ga0436365_0255646 3300039437 Bacteria 91230
84 Ga0453683_0040887 3300044673 Bacteria 2911
85 Ga0466963_0013652 3300044694 Bacteria 4993
86 Ga0466967_0025523 3300045976 Bacteria 4875
87 Ga0466967_0026638 3300045976 Bacteria 4792
88 Ga0495580_0012244 3300046472 Bacteria 6587
89 Ga0495586_0031472 3300046535 Bacteria 2842
90 Ga0501036_0079714 3300049572 Bacteria 2769
91 Ga0501041_0028642 3300049577 Bacteria 3360
92 Ga0501046_0023895 3300049580 Bacteria 5020
93 Ga0501044_0023985 3300049823 Bacteria 6482
94 nmdc:mga05p37_3005_c1 3300050507 Bacteria 19576
95 nmdc:mga05p37_38855_c1 3300050507 Bacteria 5839
96 nmdc:mga05p37_43435_c1 3300050507 Bacteria 5530
97 nmdc:mga06r32_11571_c1 3300050510 Bacteria 7946
98 nmdc:mga08y16_8049_c1 3300050511 Bacteria 11031
99 nmdc:mga0n895_11469_c1 3300050512 Bacteria 7909
100 nmdc:mga0rr50_29824_c1 3300050513 Unclassified 3853
101 nmdc:mga0a205_38499_c1 3300050515 Bacteria 4601
102 Ga0590071_000215 3300059421 Bacteria 16955
103 Ga0590075_000061 3300059424 Bacteria 27022
104 Ga0070698_100036147
105 Ga0065715_10111858
106 Ga0065707_10090225
107 Ga0070690_100023123
108 Ga0070680_100081982
109 Ga0070689_100057222
110 Ga0070661_100006029
111 Ga0070675_100006418
112 Ga0070711_100000038
113 Ga0070705_100000003
114 Ga0070700_100048351
115 Ga0070694_100003680
116 Ga0070694_100037994
117 Ga0070707_100000064
118 Ga0070707_100012432
119 Ga0070707_100041354
120 Ga0070707_100043258
121 Ga0070699_100000012
122 Ga0070699_100002390
123 Ga0070679_100034076
124 Ga0070697_100033441
125 Ga0070686_100025933
126 Ga0070695_100001967
127 Ga0070696_100026672
128 Ga0070704_100006379
129 Ga0070704_100012682
130 Ga0070704_100016212
131 Ga0068854_100042627
132 Ga0068856_100008115
133 Ga0068852_100009976
134 Ga0081539_10005381
135 Ga0075362_10005667
136 Ga0075430_100066474
137 Ga0075431_100011455
138 Ga0075431_100016673
139 Ga0075434_100017495
140 Ga0111539_10025770
141 Ga0111539_10033386
142 Ga0111539_10044297
143 Ga0114129_10000235
144 Ga0114129_10036795
145 Ga0114129_10037872
146 Ga0114129_10078321
147 Ga0105248_10137150
148 Ga0157378_10026137
149 Ga0157372_10007939
150 Ga0157380_10016538
151 Ga0157379_10056217
152 Ga0213876_10000109
153 Ga0213875_10005830
154 Ga0228598_1004085
155 Ga0207707_10031833
156 Ga0207660_10000530
157 Ga0207660_10027492
158 Ga0207657_10028039
159 Ga0207649_10006633
160 Ga0207652_10003940
161 Ga0207646_10000207
162 Ga0207646_10019407
163 Ga0207646_10066830
164 Ga0207703_10027898
165 Ga0207708_10002468
166 Ga0207702_10004917
167 Ga0207675_100024424
168 Ga0207428_10006210
169 Ga0207428_10007465
170 Ga0265338_10000716
171 Ga0307508_10010262
172 Ga0307407_10000656
173 Ga0307407_10001591
174 Ga0307416_100042457
175 Ga0307415_100002030
176 Ga0373929_0000580
177 Ga0373941_0001978
178 Ga0373960_0000416
179 Ga0373961_0001840
180 Ga0373962_0001062
181 Ga0373937_0002160
182 Ga0373937_0006294
183 Ga0373937_0078899
184 Ga0395898_0042645
185 Ga0436364_1118825
186 Ga0436365_0255646
187 Ga0453683_0040887
188 Ga0466963_0013652
189 Ga0466967_0025523
190 Ga0466967_0026638
191 Ga0495580_0012244
192 Ga0495586_0031472
193 Ga0501036_0079714
194 Ga0501041_0028642
195 Ga0501046_0023895
196 Ga0501044_0023985
197 nmdc:mga05p37_3005_c1
198 nmdc:mga05p37_38855_c1
199 nmdc:mga05p37_43435_c1
200 nmdc:mga06r32_11571_c1
201 nmdc:mga08y16_8049_c1
202 nmdc:mga0n895_11469_c1
203 nmdc:mga0rr50_29824_c1
204 nmdc:mga0a205_38499_c1
205 Ga0590071_000215
206 Ga0590075_000061

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

798

912

0.92

PF02687

FtsX

FtsX-like permease family

391

511

0.82

PF12704

MacB_PCD

MacB-like periplasmic core domain

140

352

0.77

PF12704

MacB_PCD

MacB-like periplasmic core domain

530

762

0.59

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7c-assembly1.cif.gz_B-2 heme exporter in the unliganded form 0.7776 653 777
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7666 54 258
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7362 60 254
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.7292 49 262
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.7269 60 254
ID Description Score Start End Superfamily
af_Q54CJ9_3_103_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.4329 425 508 3.30.70.100
af_P91266_1_101_1.20.1310.10 Mainly Alpha;Up-down Bundle;5 helical Cullin repeat like;Cullin Repeats 0.4157 681 765 1.20.1310.10
af_P91266_1_101_1.20.1310.10 Mainly Alpha;Up-down Bundle;5 helical Cullin repeat like;Cullin Repeats 0.3338 681 765 1.20.1310.10
af_Q54CJ9_3_103_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.2908 425 508 3.30.70.100
af_Q2FXT8_514_723_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.2522 230 378 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A321LY93-F1-model_v4 Permease 0.9065 6 780 GO:0005886
GO:0022857
AF-A0A1Q7Z9V7-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9064 20 199 GO:0016020
AF-A0A2V6K5H8-F1-model_v4 ABC3 transporter permease protein domain-containing protein 0.9037 428 780 GO:0005886
GO:0022857
AF-A0A2V8TKY2-F1-model_v4 ABC transporter permease 0.9031 401 780 GO:0005886
GO:0022857
AF-A0A2V9R198-F1-model_v4 ABC transporter permease 0.9026 2 780 GO:0005886
GO:0022857

Map