F017869
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 102 | 82 | 204 | 324 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2974294766|2974296379 |
| Length | 345 |
| Sequence | RERERPMRFRSTRPETTLHPAPAVPETMDAVVFDAPGSSEVLRSARIPVPTPVLSEVLVRVVAAGVNPIDAKTRAGRGMSAAIDAWPSVLGLDVSGVVVRTPFDAHPFPVGTEVYGMAAVPRTGGTYAEYVVVPTLSLARKPLSLSHVEAAGVPLAALTAWGLVVETALAHQGQRILIHAGGGGVGHFAVQFAAYFGAHVIATGSPRNLSWLRELGAAEVVDYTSTRFEDVVADVDVVIDLIGNVSDDTGTRSLEVIRPGGMLIEVPTGAWPGFREAAAARGIRSTDYKTIPDGGALATIARLLDSGAVRVYVDRVFDLADAAAAHFELERGHTRGKIVLRVSDD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300000545 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled | Metagenome | Rhizosphere |
| 2 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 3 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 4 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 7 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 8 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 9 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 10 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 11 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 12 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 13 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 14 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 15 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 16 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 17 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 18 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 19 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 20 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 21 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 22 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 23 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 24 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 25 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 26 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 27 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 28 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 29 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 30 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 31 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 32 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 33 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 34 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 35 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 36 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 37 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 38 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 39 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 40 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 41 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 42 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 43 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 44 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 45 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 46 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 47 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 48 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 49 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 50 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 51 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 52 | 2643221546 | Microbacterium sp. Root53 | Isolate | Unclassified |
| 53 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 54 | 2643221572 | Leifsonia sp. Root60 | Isolate | Unclassified |
| 55 | 2643221575 | Microbacterium sp. Root61 | Isolate | Unclassified |
| 56 | 2643221669 | Leifsonia sp. Root1293 | Isolate | Unclassified |
| 57 | 2757320536 | Microbacterium sp. NFIX05 | Isolate | Unclassified |
| 58 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 59 | 2773857763 | Microbacterium sp. SAI-030 | Isolate | Unclassified |
| 60 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 61 | 2808606447 | Microbacterium sp. HAR-UPW-R2A-48 | Isolate | Unclassified |
| 62 | 2821268502 | Microbacterium sp. YT0620BN | Isolate | Unclassified |
| 63 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 64 | 2852632344 | Microbacterium sp. AK009 | Isolate | Rhizosphere |
| 65 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 66 | 2870622029 | Conyzicola lurida DSM 105784 | Isolate | Unclassified |
| 67 | 2870628048 | Microbacterium thalassium DSM 12511 | Isolate | Rhizosphere |
| 68 | 2895660088 | Leifsonia flava SYP-B2174 | Isolate | Rhizosphere |
| 69 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 70 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 71 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 72 | 2928121344 | Plantibacter flavus 1756 | Isolate | Rhizosphere |
| 73 | 2939657138 | Conyzicola nivalis 2857 | Isolate | Rhizosphere |
| 74 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 75 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 76 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 77 | 2977264416 | Microbacterium testaceum SORGH_AS 594 | Isolate | Unclassified |
| 78 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 79 | 2984580707 | Microbacterium paludicola SORGH_AS919 | Isolate | Aerial Root |
| 80 | 8016254467 | Microbacterium sp. SLBN-111 (version 3) | Isolate | Rhizosphere |
| 81 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
| 82 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 68.63 |
| Metatranscriptomes | 0 |
| Isolates | 31.37 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.96 |
| Bulb | 0 |
| Endosphere | 13.73 |
| Nodule | 0 |
| Rhizoplane | 10.78 |
| Rhizosphere | 31.37 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | CNXas_1000036 | 3300000545 | Bacteria | 28421 |
| 2 | Ga0070710_10085624 | 3300005437 | Bacteria | 1849 |
| 3 | Ga0070706_100001379 | 3300005467 | Bacteria | 25801 |
| 4 | Ga0070664_100171785 | 3300005564 | Bacteria | 1923 |
| 5 | Ga0070717_10013486 | 3300006028 | Bacteria | 6264 |
| 6 | Ga0157370_10609093 | 3300013104 | Bacteria | 1000 |
| 7 | Ga0157369_10218108 | 3300013105 | Bacteria | 1998 |
| 8 | Ga0171462_1004 | 3300013250 | Bacteria | 678877 |
| 9 | Ga0157380_10089446 | 3300014326 | Bacteria | 2537 |
| 10 | Ga0163161_10177671 | 3300017792 | Bacteria | 1630 |
| 11 | Ga0207692_10064201 | 3300025898 | Bacteria | 1911 |
| 12 | Ga0207679_10074843 | 3300025945 | Bacteria | 2567 |
| 13 | Ga0207674_10330441 | 3300026116 | Bacteria | 1474 |
| 14 | Ga0268266_10275815 | 3300028379 | Bacteria | 1562 |
| 15 | Ga0307514_10029373 | 3300031649 | Bacteria | 4422 |
| 16 | Ga0307409_100422701 | 3300031995 | Bacteria | 1279 |
| 17 | Ga0466965_0020240 | 3300044683 | Bacteria | 3196 |
| 18 | Ga0466960_0008091 | 3300044901 | Bacteria | 4296 |
| 19 | Ga0496101_0284203 | 3300048904 | Bacteria | 1294 |
| 20 | Ga0496103_0105510 | 3300048906 | Bacteria | 1787 |
| 21 | Ga0496104_0060527 | 3300048907 | Bacteria | 3587 |
| 22 | Ga0496105_0486318 | 3300048908 | Bacteria | 970 |
| 23 | Ga0496109_0146899 | 3300048912 | Bacteria | 2206 |
| 24 | Ga0496110_0067670 | 3300048913 | Bacteria | 3161 |
| 25 | Ga0496110_0204101 | 3300048913 | Bacteria | 1796 |
| 26 | Ga0496111_0373337 | 3300048914 | Bacteria | 1055 |
| 27 | Ga0496113_0027079 | 3300048916 | Bacteria | 4106 |
| 28 | Ga0496115_0066686 | 3300048918 | Bacteria | 2909 |
| 29 | Ga0496115_0082629 | 3300048918 | Bacteria | 2617 |
| 30 | Ga0496117_0000061 | 3300048920 | Bacteria | 258454 |
| 31 | Ga0496117_0003300 | 3300048920 | Bacteria | 18884 |
| 32 | Ga0496118_0003395 | 3300048921 | Bacteria | 20127 |
| 33 | Ga0496119_0003574 | 3300048922 | Bacteria | 16051 |
| 34 | Ga0496119_0005875 | 3300048922 | Bacteria | 11582 |
| 35 | Ga0496119_0007162 | 3300048922 | Bacteria | 10113 |
| 36 | Ga0496119_0060634 | 3300048922 | Bacteria | 2263 |
| 37 | Ga0496120_0005083 | 3300048923 | Bacteria | 10645 |
| 38 | Ga0496120_0049858 | 3300048923 | Bacteria | 2400 |
| 39 | Ga0496122_0000095 | 3300048925 | Bacteria | 200509 |
| 40 | Ga0496122_0003875 | 3300048925 | Bacteria | 19194 |
| 41 | Ga0496122_0014603 | 3300048925 | Bacteria | 7580 |
| 42 | Ga0496123_0000100 | 3300048926 | Bacteria | 170019 |
| 43 | Ga0496123_0003999 | 3300048926 | Bacteria | 15951 |
| 44 | Ga0496123_0023311 | 3300048926 | Bacteria | 4739 |
| 45 | Ga0496124_0051990 | 3300048927 | Bacteria | 3483 |
| 46 | Ga0496125_0000360 | 3300048928 | Bacteria | 86040 |
| 47 | Ga0496125_0002659 | 3300048928 | Bacteria | 22839 |
| 48 | Ga0496125_0030254 | 3300048928 | Bacteria | 4847 |
| 49 | Ga0496125_0142973 | 3300048928 | Bacteria | 1660 |
| 50 | Ga0496126_0005975 | 3300048929 | Bacteria | 13688 |
| 51 | Ga0496126_0064427 | 3300048929 | Bacteria | 3283 |
| 52 | Ga0501032_0243303 | 3300049569 | Bacteria | 1169 |
| 53 | Ga0501034_0084315 | 3300049571 | Bacteria | 3179 |
| 54 | Ga0501067_0064377 | 3300049583 | Bacteria | 2030 |
| 55 | Ga0501070_0003038 | 3300049586 | Bacteria | 14613 |
| 56 | Ga0501073_0015198 | 3300049589 | Bacteria | 5584 |
| 57 | nmdc:mga0yw44_7708_c1 | 3300050492 | Bacteria | 5315 |
| 58 | Ga0500643_000297 | 3300053087 | Bacteria | 41873 |
| 59 | Ga0500593_002593 | 3300053117 | Bacteria | 6669 |
| 60 | Ga0500559_0002163 | 3300053136 | Bacteria | 10412 |
| 61 | Ga0500559_0050788 | 3300053136 | Bacteria | 1830 |
| 62 | Ga0500568_0001284 | 3300053139 | Bacteria | 16535 |
| 63 | Ga0500573_0019859 | 3300053140 | Bacteria | 3846 |
| 64 | Ga0500573_0028864 | 3300053140 | Bacteria | 3196 |
| 65 | Ga0500573_0032114 | 3300053140 | Bacteria | 3029 |
| 66 | Ga0500573_0115305 | 3300053140 | Bacteria | 1500 |
| 67 | Ga0500577_0029367 | 3300053142 | Bacteria | 1903 |
| 68 | Ga0500577_0115071 | 3300053142 | Bacteria | 1114 |
| 69 | Ga0500616_0022644 | 3300053153 | Bacteria | 3506 |
| 70 | Ga0500622_0001532 | 3300053156 | Bacteria | 18328 |
| 71 | 2974296379 | 2974294766 | Bacteria | 3767688 |
| 72 | 2643753932 | 2643221546 | Bacteria | 2910897 |
| 73 | 2643846483 | 2643221566 | Bacteria | 3460379 |
| 74 | 2643877590 | 2643221572 | Bacteria | 3614809 |
| 75 | 2643886488 | 2643221575 | Bacteria | 4022601 |
| 76 | 2644384645 | 2643221669 | Bacteria | 3611286 |
| 77 | 2758227015 | 2757320536 | Bacteria | 3629334 |
| 78 | 2774381049 | 2773857758 | Bacteria | 3592392 |
| 79 | 2774398448 | 2773857763 | Bacteria | 4180068 |
| 80 | 2808630258 | 2808606306 | Bacteria | 3608896 |
| 81 | 2809228207 | 2808606447 | Bacteria | 3572005 |
| 82 | 2821270937 | 2821268502 | Bacteria | 3750023 |
| 83 | 2833711935 | 2833709550 | Bacteria | 4008291 |
| 84 | 2852634918 | 2852632344 | Bacteria | 3463163 |
| 85 | 2852643581 | 2852643534 | Bacteria | 3013378 |
| 86 | 2870624914 | 2870622029 | Bacteria | 3643329 |
| 87 | 2870631282 | 2870628048 | Bacteria | 3696012 |
| 88 | 2895662426 | 2895660088 | Bacteria | 3782833 |
| 89 | 2904511067 | 2904509784 | Bacteria | 3520416 |
| 90 | 2908680183 | 2908678064 | Bacteria | 3482747 |
| 91 | 2919072384 | 2919069694 | Bacteria | 3622919 |
| 92 | 2928124119 | 2928121344 | Bacteria | 3972376 |
| 93 | 2939659698 | 2939657138 | Bacteria | 3740283 |
| 94 | 2974327386 | 2974324384 | Bacteria | 3750535 |
| 95 | 2977229005 | 2977228692 | Bacteria | 3450105 |
| 96 | 2977237792 | 2977236895 | Bacteria | 3569373 |
| 97 | 2977267672 | 2977264416 | Bacteria | 3750737 |
| 98 | 2984544425 | 2984542743 | Bacteria | 3569378 |
| 99 | 2984583810 | 2984580707 | Bacteria | 3351387 |
| 100 | 8016256607 | 8016254467 | Bacteria | 3797036 |
| 101 | 8045834151 | 8045830549 | Bacteria | 4444727 |
| 102 | 8047718061 | 8047710418 | Bacteria | 11023148 |
| 103 | CNXas_1000036 | |||
| 104 | Ga0070710_10085624 | |||
| 105 | Ga0070706_100001379 | |||
| 106 | Ga0070664_100171785 | |||
| 107 | Ga0070717_10013486 | |||
| 108 | Ga0157370_10609093 | |||
| 109 | Ga0157369_10218108 | |||
| 110 | Ga0171462_1004 | |||
| 111 | Ga0157380_10089446 | |||
| 112 | Ga0163161_10177671 | |||
| 113 | Ga0207692_10064201 | |||
| 114 | Ga0207679_10074843 | |||
| 115 | Ga0207674_10330441 | |||
| 116 | Ga0268266_10275815 | |||
| 117 | Ga0307514_10029373 | |||
| 118 | Ga0307409_100422701 | |||
| 119 | Ga0466965_0020240 | |||
| 120 | Ga0466960_0008091 | |||
| 121 | Ga0496101_0284203 | |||
| 122 | Ga0496103_0105510 | |||
| 123 | Ga0496104_0060527 | |||
| 124 | Ga0496105_0486318 | |||
| 125 | Ga0496109_0146899 | |||
| 126 | Ga0496110_0067670 | |||
| 127 | Ga0496110_0204101 | |||
| 128 | Ga0496111_0373337 | |||
| 129 | Ga0496113_0027079 | |||
| 130 | Ga0496115_0066686 | |||
| 131 | Ga0496115_0082629 | |||
| 132 | Ga0496117_0000061 | |||
| 133 | Ga0496117_0003300 | |||
| 134 | Ga0496118_0003395 | |||
| 135 | Ga0496119_0003574 | |||
| 136 | Ga0496119_0005875 | |||
| 137 | Ga0496119_0007162 | |||
| 138 | Ga0496119_0060634 | |||
| 139 | Ga0496120_0005083 | |||
| 140 | Ga0496120_0049858 | |||
| 141 | Ga0496122_0000095 | |||
| 142 | Ga0496122_0003875 | |||
| 143 | Ga0496122_0014603 | |||
| 144 | Ga0496123_0000100 | |||
| 145 | Ga0496123_0003999 | |||
| 146 | Ga0496123_0023311 | |||
| 147 | Ga0496124_0051990 | |||
| 148 | Ga0496125_0000360 | |||
| 149 | Ga0496125_0002659 | |||
| 150 | Ga0496125_0030254 | |||
| 151 | Ga0496125_0142973 | |||
| 152 | Ga0496126_0005975 | |||
| 153 | Ga0496126_0064427 | |||
| 154 | Ga0501032_0243303 | |||
| 155 | Ga0501034_0084315 | |||
| 156 | Ga0501067_0064377 | |||
| 157 | Ga0501070_0003038 | |||
| 158 | Ga0501073_0015198 | |||
| 159 | nmdc:mga0yw44_7708_c1 | |||
| 160 | Ga0500643_000297 | |||
| 161 | Ga0500593_002593 | |||
| 162 | Ga0500559_0002163 | |||
| 163 | Ga0500559_0050788 | |||
| 164 | Ga0500568_0001284 | |||
| 165 | Ga0500573_0019859 | |||
| 166 | Ga0500573_0028864 | |||
| 167 | Ga0500573_0032114 | |||
| 168 | Ga0500573_0115305 | |||
| 169 | Ga0500577_0029367 | |||
| 170 | Ga0500577_0115071 | |||
| 171 | Ga0500616_0022644 | |||
| 172 | Ga0500622_0001532 | |||
| 173 | 2974296379 | |||
| 174 | 2643753932 | |||
| 175 | 2643846483 | |||
| 176 | 2643877590 | |||
| 177 | 2643886488 | |||
| 178 | 2644384645 | |||
| 179 | 2758227015 | |||
| 180 | 2774381049 | |||
| 181 | 2774398448 | |||
| 182 | 2808630258 | |||
| 183 | 2809228207 | |||
| 184 | 2821270937 | |||
| 185 | 2833711935 | |||
| 186 | 2852634918 | |||
| 187 | 2852643581 | |||
| 188 | 2870624914 | |||
| 189 | 2870631282 | |||
| 190 | 2895662426 | |||
| 191 | 2904511067 | |||
| 192 | 2908680183 | |||
| 193 | 2919072384 | |||
| 194 | 2928124119 | |||
| 195 | 2939659698 | |||
| 196 | 2974327386 | |||
| 197 | 2977229005 | |||
| 198 | 2977237792 | |||
| 199 | 2977267672 | |||
| 200 | 2984544425 | |||
| 201 | 2984583810 | |||
| 202 | 8016256607 | |||
| 203 | 8045834151 | |||
| 204 | 8047718061 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5a3j-assembly8.cif.gz_H | crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. | 0.9433 | 30 | 339 |
| 3tqh-assembly1.cif.gz_A | structure of the quinone oxidoreductase from coxiella burnetii | 0.9336 | 30 | 339 |
| 3gaz-assembly1.cif.gz_B | crystal structure of an alcohol dehydrogenase superfamily protein from novosphingobium aromaticivorans | 0.9243 | 32 | 339 |
| 2vn8-assembly2.cif.gz_B | crystal structure of human reticulon 4 interacting protein 1 in complex with nadph | 0.9145 | 32 | 340 |
| 4dvj-assembly1.cif.gz_B | crystal structure of a putative zinc-dependent alcohol dehydrogenase protein from rhizobium etli cfn 42 | 0.9119 | 29 | 341 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q924D0_40_179_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9651 | 31 | 153 | 3.90.180.10 |
| af_Q54II4_2_127_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9609 | 33 | 153 | 3.90.180.10 |
| af_Q9LK96_31_155_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9607 | 33 | 150 | 3.90.180.10 |
| af_M0R3N4_1_117_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9513 | 32 | 150 | 3.90.180.10 |
| af_I1LV40_37_360_3.30.70.80 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Peptidase S8 propeptide/proteinase inhibitor I9 | 0.9421 | 40 | 335 | 3.30.70.80 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V9NJB6-F1-model_v4 | NADPH:quinone reductase | 0.9939 | 171 | 340 |
GO:0008270
GO:0016491 |
| AF-A0A1S2UPU0-F1-model_v4 | Oxidoreductase | 0.9859 | 32 | 339 |
GO:0016491
|
| AF-A0A5S3TAE9-F1-model_v4 | deleted | 0.9803 | 32 | 339 |
|
| AF-A0A840P2W6-F1-model_v4 | NADPH:quinone reductase-like Zn-dependent oxidoreductase | 0.9784 | 145 | 339 |
GO:0016491
|
| AF-A0A254NLG6-F1-model_v4 | NADPH:quinone reductase | 0.9772 | 32 | 338 |
GO:0008270
GO:0016491 |