F016038

General Info

Members Datasets Scaffolds Average Seq Length
102 28 102 102

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0553097|Ga0316582_0553097_97_441
Length 114
Sequence LGIRSYIDEKRRIIMPEFGSPFSGLANDRKLTDQELIRAIRFMIAAEYEAIQLYMQLAESTDNQLAIEVLRDIADEERVHAGEFLRLLRELAPDEEKFYAEGAEEVEEEIKKMK

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
3 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
4 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
5 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
6 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
7 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
8 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
9 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
10 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
11 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
12 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
13 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
14 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
15 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
16 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
17 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
18 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
19 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
20 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
21 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
22 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
23 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
24 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
25 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
26 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
27 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
28 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.02
Metatranscriptomes 0.98
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10022992 3300028558 Bacteria 1783
2 Ga0265323_10037586 3300028653 Bacteria 1773
3 Ga0265323_10116591 3300028653 Unclassified 873
4 Ga0265322_10006787 3300028654 Bacteria 3360
5 Ga0265322_10012256 3300028654 Bacteria 2479
6 Ga0265322_10089382 3300028654 Bacteria 875
7 Ga0265338_10083787 3300028800 Unclassified 2665
8 Ga0265338_10760325 3300028800 Unclassified 666
9 Ga0265338_11016797 3300028800 Bacteria 561
10 Ga0265324_10244953 3300029957 Bacteria 609
11 Ga0265330_10036103 3300031235 Bacteria 2203
12 Ga0265330_10121146 3300031235 Bacteria 1115
13 Ga0265330_10137274 3300031235 Bacteria 1040
14 Ga0265330_10203017 3300031235 Unclassified 838
15 Ga0265330_10254414 3300031235 Bacteria 740
16 Ga0265330_10298303 3300031235 Unclassified 679
17 Ga0265332_10130898 3300031238 Bacteria 1052
18 Ga0265332_10137331 3300031238 Bacteria 1025
19 Ga0265328_10106259 3300031239 Bacteria 1042
20 Ga0265328_10263328 3300031239 Unclassified 661
21 Ga0265328_10436284 3300031239 Unclassified 517
22 Ga0265320_10142508 3300031240 Bacteria 1085
23 Ga0265320_10251796 3300031240 Bacteria 783
24 Ga0265325_10352410 3300031241 Unclassified 650
25 Ga0265325_10397555 3300031241 Bacteria 604
26 Ga0265329_10063446 3300031242 Bacteria 1169
27 Ga0265329_10173449 3300031242 Bacteria 704
28 Ga0265329_10264196 3300031242 Unclassified 576
29 Ga0265340_10009336 3300031247 Bacteria 5268
30 Ga0265340_10320517 3300031247 Bacteria 686
31 Ga0265339_10009880 3300031249 Bacteria 5960
32 Ga0265339_10087170 3300031249 Bacteria 1641
33 Ga0265339_10351852 3300031249 Unclassified 694
34 Ga0265339_10354339 3300031249 Unclassified 691
35 Ga0265331_10275127 3300031250 Unclassified 755
36 Ga0265331_10594771 3300031250 Unclassified 500
37 Ga0265327_10081652 3300031251 Bacteria 1596
38 Ga0265327_10093477 3300031251 Unclassified 1463
39 Ga0265327_10507878 3300031251 Unclassified 519
40 Ga0265316_10000642 3300031344 Bacteria 38955
41 Ga0265316_10002100 3300031344 Bacteria 20956
42 Ga0265316_10006125 3300031344 Bacteria 11538
43 Ga0265316_10011141 3300031344 Bacteria 8136
44 Ga0265316_10012501 3300031344 Bacteria 7609
45 Ga0265316_10037404 3300031344 Bacteria 3917
46 Ga0265316_10069592 3300031344 Bacteria 2716
47 Ga0265316_10072542 3300031344 Unclassified 2652
48 Ga0265316_10092960 3300031344 Bacteria 2299
49 Ga0265316_10124211 3300031344 Bacteria 1948
50 Ga0265316_10138100 3300031344 Bacteria 1833
51 Ga0265316_10242164 3300031344 Bacteria 1326
52 Ga0265316_10330091 3300031344 Bacteria 1107
53 Ga0265316_10352768 3300031344 Bacteria 1065
54 Ga0265316_10891620 3300031344 Unclassified 621
55 Ga0265316_10970556 3300031344 Unclassified 592
56 Ga0316579_10128136 3300031691 Unclassified 1222
57 Ga0265314_10007704 3300031711 Bacteria 9311
58 Ga0265314_10200107 3300031711 Bacteria 1182
59 Ga0265342_10000215 3300031712 Bacteria 65249
60 Ga0265342_10074951 3300031712 Bacteria 1965
61 Ga0265342_10101323 3300031712 Bacteria 1640
62 Ga0265342_10152315 3300031712 Bacteria 1283
63 Ga0265342_10207173 3300031712 Bacteria 1062
64 Ga0265342_10652741 3300031712 Bacteria 528
65 Ga0316578_10711089 3300031728 Unclassified 585
66 Ga0316577_10246057 3300031733 Bacteria 1012
67 Ga0316596_1221446 3300033541 Bacteria 530
68 Ga0316582_0004805 3300036647 Bacteria 6887
69 Ga0316582_0012486 3300036647 Unclassified 4744
70 Ga0316582_0032553 3300036647 Bacteria 3196
71 Ga0316582_0098179 3300036647 Bacteria 1937
72 Ga0316582_0492268 3300036647 Bacteria 845
73 Ga0316582_0523845 3300036647 Unclassified 817
74 Ga0316582_0530512 3300036647 Bacteria 811
75 Ga0316582_0553097 3300036647 Bacteria 793
76 Ga0316582_0637296 3300036647 Unclassified 733
77 Ga0316582_0781050 3300036647 Bacteria 655
78 Ga0316582_0882577 3300036647 Unclassified 612
79 Ga0316582_0912421 3300036647 Bacteria 601
80 Ga0316584_0573765 3300036712 Unclassified 785
81 Ga0451577_0006214 3300042876 Bacteria 11981
82 Ga0451577_0973466 3300042876 Unclassified 762
83 Ga0451577_1314719 3300042876 Bacteria 643
84 Ga0453683_0000223 3300044673 Bacteria 76099
85 Ga0453683_0008646 3300044673 Bacteria 6828
86 Ga0453683_0054796 3300044673 Bacteria 2496
87 Ga0453683_0055606 3300044673 Unclassified 2477
88 Ga0453683_0553504 3300044673 Unclassified 748
89 Ga0453684_0005092 3300044712 Bacteria 26514
90 Ga0453684_0039125 3300044712 Bacteria 6469
91 Ga0453684_0086180 3300044712 Bacteria 3898
92 Ga0453684_0235751 3300044712 Bacteria 2110
93 Ga0453684_0250994 3300044712 Unclassified 2032
94 Ga0453684_0398276 3300044712 Bacteria 1542
95 Ga0453684_0512818 3300044712 Bacteria 1326
96 Ga0453684_1052019 3300044712 Bacteria 863
97 Ga0453684_1940320 3300044712 Bacteria 595
98 Ga0453684_2394708 3300044712 Unclassified 523
99 Ga0451576_0003008 3300045051 Bacteria 23829
100 Ga0451576_0010225 3300045051 Bacteria 10787
101 Ga0451576_0014680 3300045051 Bacteria 8708
102 Ga0451576_0933141 3300045051 Bacteria 910

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0006214 Ga0451577_0006214_9102_9395 97
2 3300044673 Ga0453683_0008646 Ga0453683_0008646_274_567 97
3 3300044712 Ga0453684_0086180 Ga0453684_0086180_1885_2178 97
4 3300045051 Ga0451576_0010225 Ga0451576_0010225_1885_2178 97
5 3300028653 Ga0265323_10116591 Ga0265323_101165911 98
6 3300031728 Ga0316578_10711089 Ga0316578_107110891 98
7 3300028558 Ga0265326_10022992 Ga0265326_100229922 100
8 3300028653 Ga0265323_10037586 Ga0265323_100375861 100
9 3300028654 Ga0265322_10006787 Ga0265322_100067872 100
10 3300028654 Ga0265322_10012256 Ga0265322_100122562 100
11 3300028654 Ga0265322_10089382 Ga0265322_100893821 100
12 3300028800 Ga0265338_10083787 Ga0265338_100837873 100
13 3300028800 Ga0265338_10760325 Ga0265338_107603251 100
14 3300028800 Ga0265338_11016797 Ga0265338_110167972 100
15 3300029957 Ga0265324_10244953 Ga0265324_102449532 100
16 3300031235 Ga0265330_10036103 Ga0265330_100361033 100
17 3300031235 Ga0265330_10121146 Ga0265330_101211461 100
18 3300031235 Ga0265330_10137274 Ga0265330_101372743 100
19 3300031235 Ga0265330_10203017 Ga0265330_102030172 100
20 3300031235 Ga0265330_10254414 Ga0265330_102544142 100
21 3300031235 Ga0265330_10298303 Ga0265330_102983031 100
22 3300031238 Ga0265332_10130898 Ga0265332_101308982 100
23 3300031238 Ga0265332_10137331 Ga0265332_101373313 100
24 3300031239 Ga0265328_10106259 Ga0265328_101062592 100
25 3300031239 Ga0265328_10263328 Ga0265328_102633282 100
26 3300031239 Ga0265328_10436284 Ga0265328_104362841 100
27 3300031240 Ga0265320_10142508 Ga0265320_101425082 100
28 3300031240 Ga0265320_10251796 Ga0265320_102517961 100
29 3300031241 Ga0265325_10352410 Ga0265325_103524102 100
30 3300031241 Ga0265325_10397555 Ga0265325_103975551 100
31 3300031242 Ga0265329_10063446 Ga0265329_100634462 100
32 3300031242 Ga0265329_10173449 Ga0265329_101734492 100
33 3300031242 Ga0265329_10264196 Ga0265329_102641962 100
34 3300031247 Ga0265340_10009336 Ga0265340_100093365 100
35 3300031247 Ga0265340_10320517 Ga0265340_103205171 100
36 3300031249 Ga0265339_10009880 Ga0265339_100098802 100
37 3300031249 Ga0265339_10087170 Ga0265339_100871701 100
38 3300031249 Ga0265339_10351852 Ga0265339_103518522 100
39 3300031249 Ga0265339_10354339 Ga0265339_103543391 100
40 3300031250 Ga0265331_10275127 Ga0265331_102751271 100
41 3300031250 Ga0265331_10594771 Ga0265331_105947712 100
42 3300031251 Ga0265327_10081652 Ga0265327_100816522 100
43 3300031251 Ga0265327_10093477 Ga0265327_100934772 100
44 3300031251 Ga0265327_10507878 Ga0265327_105078782 100
45 3300031344 Ga0265316_10000642 Ga0265316_100006428 100
46 3300031344 Ga0265316_10002100 Ga0265316_100021006 100
47 3300031344 Ga0265316_10006125 Ga0265316_100061253 100
48 3300031344 Ga0265316_10011141 Ga0265316_100111411 100
49 3300031344 Ga0265316_10012501 Ga0265316_100125017 100
50 3300031344 Ga0265316_10037404 Ga0265316_100374042 100
51 3300031344 Ga0265316_10069592 Ga0265316_100695922 100
52 3300031344 Ga0265316_10072542 Ga0265316_100725422 100
53 3300031344 Ga0265316_10092960 Ga0265316_100929603 100
54 3300031344 Ga0265316_10124211 Ga0265316_101242112 100
55 3300031344 Ga0265316_10138100 Ga0265316_101381003 100
56 3300031344 Ga0265316_10242164 Ga0265316_102421641 100
57 3300031344 Ga0265316_10330091 Ga0265316_103300912 100
58 3300031344 Ga0265316_10352768 Ga0265316_103527682 100
59 3300031344 Ga0265316_10891620 Ga0265316_108916201 100
60 3300031344 Ga0265316_10970556 Ga0265316_109705562 100
61 3300031691 Ga0316579_10128136 Ga0316579_101281362 100
62 3300031711 Ga0265314_10007704 Ga0265314_100077049 100
63 3300031711 Ga0265314_10200107 Ga0265314_102001072 100
64 3300031712 Ga0265342_10000215 Ga0265342_100002157 100
65 3300031712 Ga0265342_10074951 Ga0265342_100749513 100
66 3300031712 Ga0265342_10101323 Ga0265342_101013233 100
67 3300031712 Ga0265342_10152315 Ga0265342_101523151 100
68 3300031712 Ga0265342_10207173 Ga0265342_102071732 100
69 3300031712 Ga0265342_10652741 Ga0265342_106527412 100
70 3300031733 Ga0316577_10246057 Ga0316577_102460572 100
71 3300033541 Ga0316596_1221446 Ga0316596_12214461 100
72 3300036647 Ga0316582_0004805 Ga0316582_0004805_1060_1371 100
73 3300036647 Ga0316582_0012486 Ga0316582_0012486_3188_3496 100
74 3300036647 Ga0316582_0032553 Ga0316582_0032553_88_390 100
75 3300036647 Ga0316582_0098179 Ga0316582_0098179_1538_1846 100
76 3300036647 Ga0316582_0492268 Ga0316582_0492268_412_726 100
77 3300036647 Ga0316582_0523845 Ga0316582_0523845_446_754 100
78 3300036647 Ga0316582_0530512 Ga0316582_0530512_195_497 100
79 3300036647 Ga0316582_0553097 Ga0316582_0553097_97_441 100
80 3300036647 Ga0316582_0637296 Ga0316582_0637296_140_445 100
81 3300036647 Ga0316582_0781050 Ga0316582_0781050_171_476 100
82 3300036647 Ga0316582_0882577 Ga0316582_0882577_33_338 100
83 3300036647 Ga0316582_0912421 Ga0316582_0912421_115_420 100
84 3300036712 Ga0316584_0573765 Ga0316584_0573765_375_740 100
85 3300042876 Ga0451577_0973466 Ga0451577_0973466_197_520 100
86 3300042876 Ga0451577_1314719 Ga0451577_1314719_19_324 100
87 3300044673 Ga0453683_0000223 Ga0453683_0000223_34463_34804 100
88 3300044673 Ga0453683_0054796 Ga0453683_0054796_1317_1622 100
89 3300044673 Ga0453683_0055606 Ga0453683_0055606_1137_1442 100
90 3300044673 Ga0453683_0553504 Ga0453683_0553504_262_567 100
91 3300044712 Ga0453684_0005092 Ga0453684_0005092_22164_22466 100
92 3300044712 Ga0453684_0039125 Ga0453684_0039125_4702_5025 100
93 3300044712 Ga0453684_0235751 Ga0453684_0235751_1546_1848 100
94 3300044712 Ga0453684_0250994 Ga0453684_0250994_1691_1996 100
95 3300044712 Ga0453684_0398276 Ga0453684_0398276_497_802 100
96 3300044712 Ga0453684_0512818 Ga0453684_0512818_375_677 100
97 3300044712 Ga0453684_1052019 Ga0453684_1052019_78_392 100
98 3300044712 Ga0453684_1940320 Ga0453684_1940320_32_334 100
99 3300044712 Ga0453684_2394708 Ga0453684_2394708_184_507 100
100 3300045051 Ga0451576_0003008 Ga0451576_0003008_10983_11288 100
101 3300045051 Ga0451576_0014680 Ga0451576_0014680_3821_4126 100
102 3300045051 Ga0451576_0933141 Ga0451576_0933141_180_506 100

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02915

Rubrerythrin

Rubrerythrin

39

114

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7s5c-assembly1.cif.gz_J m. xanthus ferritin-like protein encb 0.9815 23 77
7s5c-assembly1.cif.gz_F m. xanthus ferritin-like protein encb 0.9812 23 77
7s5c-assembly1.cif.gz_G m. xanthus ferritin-like protein encb 0.9791 23 80
7s5k-assembly1.cif.gz_E m. xanthus ferritin-like protein encb 0.9701 23 83
7s5k-assembly1.cif.gz_B m. xanthus ferritin-like protein encb 0.965 23 83
ID Description Score Start End Superfamily
af_Q8GX86_53_210_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.9606 19 79 1.20.140.40
4etrA00 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.953 18 78 1.20.1260.10
1mftA00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9495 25 73 1.20.5.420
5c39B00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9453 25 70 1.20.5.420
1mftB00 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces;Immunoglobulin FC, subunit C 0.9372 25 70 1.20.5.420
ID Description Score Start End GO Terms
AF-A0A7V3VSU9-F1-model_v4 Rubrerythrin 0.9918 21 98 GO:0016491
GO:0046872
GO:0140737
AF-A0A3D1TCL8-F1-model_v4 Rubrerythrin 0.9853 17 98 GO:0016491
GO:0046872
GO:0140737
AF-A0A7X7R3T7-F1-model_v4 Rubrerythrin 0.9834 19 77 GO:0016491
GO:0046872
AF-A0A7X7IVW2-F1-model_v4 deleted 0.9811 16 98
AF-A0A1V4U789-F1-model_v4 Rubrerythrin 0.9809 13 100 GO:0016491
GO:0046872
GO:0140737

Feature Viewer

pLDDT pTM Quality
90.48 0.74 High
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Predicted Structure (AlphaFold2)

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