F013850

General Info

Members Datasets Scaffolds Average Seq Length
102 76 93 378

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100015033|Ga0068856_1000150333
Length 371
Sequence MISTRKIQMVDLKGQYEKIKAEVDAGIQEVINTTAFINGPAVKEFQASLETYLGVKHVIPCANGTDALQIAMMALGLKPGDEVITASFTYVATAEVIGLLGLTPVLVDVDPDTAIVRNITPKTKAIVPVHLFGQCANMERIMEIARQHNLYVIEDVAQAIGADYTFSNGTKAKAGTIGTVGCTSFFPSKNLGCYGDGGAIYTNDEELAKKLKMISHHGQSVLYKHDVLGVNSRLDTMQAVVLNAKLKHLDEYAAARRAAADFYDKALANQPKLKTPVRSKNSTHVFHQYTLQLNGIDRAKLREQLAERGIPAMIYYPIPLHEQNAFKSDRFKKGDFPVTEKLCNCVLSLPMHTELDTDTLEYITKNLLELI

Samples

Sample ID Description Type Environment
1 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
2 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
5 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
6 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
32 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
54 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
55 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
62 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
63 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
64 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
65 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
68 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
69 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
70 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
71 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
72 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
73 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
74 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
75 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
76 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.18
Metatranscriptomes 0
Isolates 8.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.39
Nodule 0
Rhizoplane 1.96
Rhizosphere 53.92
Stem 0
Stem Tuber 0
Unclassified 13.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10023940 3300003320 Bacteria 2641
2 rootL2_10073425 3300003322 Bacteria 10286
3 rootL2_10133236 3300003322 Bacteria 4797
4 rootL2_10239656 3300003322 Bacteria 3496
5 JGI25160J50197_1003075 3300003354 Bacteria 7609
6 Ga0055535_1007579 3300003761 Bacteria 2054
7 Ga0055526_1000270 3300003771 Bacteria 43854
8 Ga0055528_1000108 3300003790 Bacteria 66828
9 Ga0055530_10000279 3300003791 Bacteria 46371
10 Ga0055531_10000003 3300003794 Bacteria 274424
11 Ga0055531_10000027 3300003794 Bacteria 160284
12 Ga0065165_1004556 3300005262 Bacteria 8464
13 Ga0065165_1019507 3300005262 Bacteria 2417
14 Ga0070670_100200717 3300005331 Bacteria 1733
15 Ga0070714_100043997 3300005435 Bacteria 3779
16 Ga0068856_100015033 3300005614 Bacteria 7475
17 Ga0068856_100063219 3300005614 Bacteria 3657
18 Ga0068851_10000436 3300005834 Bacteria 18618
19 Ga0097621_100027795 3300006237 Bacteria 4452
20 Ga0105237_10001614 3300009545 Bacteria 29283
21 Ga0105237_10036222 3300009545 Bacteria 4991
22 Ga0105239_10000255 3300010375 Bacteria 79421
23 Ga0157378_10006785 3300013297 Bacteria 9993
24 Ga0157372_10117924 3300013307 Bacteria 3045
25 Ga0157375_10000220 3300013308 Bacteria 53557
26 Ga0157380_10000068 3300014326 Bacteria 58289
27 Ga0157380_10000623 3300014326 Bacteria 21772
28 Ga0157379_10029904 3300014968 Bacteria 4844
29 Ga0209436_100146 3300025208 Bacteria 34185
30 Ga0209258_100041 3300025242 Bacteria 381381
31 Ga0209148_1000090 3300025254 Bacteria 250982
32 Ga0209673_1000183 3300025273 Bacteria 126175
33 Ga0209130_1000857 3300025284 Bacteria 25201
34 Ga0209564_1000561 3300025295 Bacteria 59357
35 Ga0209050_1001554 3300025298 Bacteria 23942
36 Ga0207426_1000033 3300025302 Bacteria 455976
37 Ga0207426_1001332 3300025302 Bacteria 20979
38 Ga0207426_1005428 3300025302 Bacteria 5817
39 Ga0207426_1027879 3300025302 Bacteria 1877
40 Ga0209257_1000001 3300025304 Bacteria 2274655
41 Ga0209257_1000008 3300025304 Bacteria 1294570
42 Ga0207656_10001319 3300025321 Bacteria 8169
43 Ga0207671_10006642 3300025914 Bacteria 10253
44 Ga0207664_10051361 3300025929 Bacteria 3255
45 Ga0207667_10533582 3300025949 Bacteria 1188
46 Ga0207702_10079704 3300026078 Bacteria 2839
47 Ga0207698_10010165 3300026142 Bacteria 6031
48 Ga0265338_10007957 3300028800 Bacteria 12987
49 Ga0265338_10023226 3300028800 Bacteria 6384
50 Ga0265338_10064440 3300028800 Bacteria 3187
51 Ga0265324_10019926 3300029957 Bacteria 2414
52 Ga0265327_10000390 3300031251 Bacteria 82772
53 Ga0265316_10001977 3300031344 Bacteria 21562
54 Ga0265314_10153204 3300031711 Unclassified 1411
55 Ga0316577_10061492 3300031733 Unclassified 2096
56 Ga0307412_10022105 3300031911 Bacteria 3894
57 Ga0395905_0005497 3300037471 Bacteria 12926
58 Ga0451795_0275393 3300041456 Bacteria 2590
59 Ga0439445_0000023 3300042004 Bacteria 20324
60 Ga0451577_0000061 3300042876 Bacteria 268366
61 Ga0451577_0034649 3300042876 Bacteria 4549
62 Ga0451577_0038210 3300042876 Bacteria 4318
63 Ga0451577_0217977 3300042876 Bacteria 1725
64 Ga0451577_0235368 3300042876 Bacteria 1656
65 Ga0466969_0051179 3300044656 Bacteria 2034
66 Ga0453683_0000542 3300044673 Bacteria 42086
67 Ga0453683_0002546 3300044673 Bacteria 14055
68 Ga0453684_0000084 3300044712 Bacteria 398306
69 Ga0453684_0000572 3300044712 Bacteria 137431
70 Ga0453684_0003949 3300044712 Bacteria 32439
71 Ga0453684_0025786 3300044712 Bacteria 8521
72 Ga0453684_0142133 3300044712 Bacteria 2864
73 Ga0453684_0168998 3300044712 Bacteria 2579
74 Ga0453684_0211307 3300044712 Bacteria 2255
75 Ga0451576_0000179 3300045051 Bacteria 159850
76 Ga0451576_0004071 3300045051 Bacteria 19332
77 Ga0495668_0000301 3300046616 Bacteria 68097
78 Ga0495636_0000012 3300047318 Bacteria 85270
79 Ga0496115_0004697 3300048918 Bacteria 9903
80 Ga0496124_0253739 3300048927 Bacteria 1299
81 Ga0496126_0008948 3300048929 Bacteria 10722
82 Ga0496126_0021923 3300048929 Bacteria 6230
83 Ga0501034_0194176 3300049571 Bacteria 1991
84 Ga0501241_000448 3300049758 Bacteria 8985
85 Ga0500583_0003367 3300053092 Bacteria 5022
86 Ga0500658_0038882 3300053134 Bacteria 1898
87 Ga0500559_0003554 3300053136 Bacteria 7625
88 Ga0500561_0051194 3300053137 Bacteria 1128
89 Ga0500577_0003098 3300053142 Bacteria 4304
90 Ga0500590_042130 3300053148 Bacteria 2345
91 Ga0500616_0007492 3300053153 Bacteria 6924
92 Ga0500633_0000867 3300053160 Bacteria 5254
93 Ga0500636_0007397 3300053177 Bacteria 6354

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053137 Ga0500561_0051194 Ga0500561_0051194_29_1099 356
2 3300042876 Ga0451577_0000061 Ga0451577_0000061_152515_153666 365
3 3300044712 Ga0453684_0000084 Ga0453684_0000084_288453_289604 365
4 3300045051 Ga0451576_0000179 Ga0451576_0000179_111197_112348 365
5 iso_pu_bacteria 2588254257 2590613924 367
6 3300005614 Ga0068856_100015033 Ga0068856_1000150333 368
7 3300026078 Ga0207702_10079704 Ga0207702_100797042 368
8 3300044712 Ga0453684_0142133 Ga0453684_0142133_1375_2484 369
9 3300042876 Ga0451577_0235368 Ga0451577_0235368_270_1382 370
10 3300044673 Ga0453683_0000542 Ga0453683_0000542_39824_40936 370
11 3300047318 Ga0495636_0000012 Ga0495636_0000012_31297_32409 370
12 3300046616 Ga0495668_0000301 Ga0495668_0000301_23688_24803 371
13 iso_pu_bacteria 2728369107 2729199985 371
14 iso_pu_bacteria 2738541283 2738758251 371
15 iso_pu_bacteria 2818991460 2819676545 371
16 iso_pu_bacteria 2896085136 2896087478 371
17 iso_pu_bacteria 2896109856 2896114831 371
18 3300044673 Ga0453683_0002546 Ga0453683_0002546_10037_11161 372
19 3300049758 Ga0501241_000448 Ga0501241_000448_4386_5504 372
20 3300005262 Ga0065165_1019507 Ga0065165_10195073 374
21 3300005331 Ga0070670_100200717 Ga0070670_1002007172 374
22 3300005435 Ga0070714_100043997 Ga0070714_1000439972 374
23 3300013308 Ga0157375_10000220 Ga0157375_1000022021 374
24 3300025302 Ga0207426_1005428 Ga0207426_10054286 374
25 3300048927 Ga0496124_0253739 Ga0496124_0253739_105_1229 374
26 3300003354 JGI25160J50197_1003075 JGI25160J50197_10030753 375
27 3300006237 Ga0097621_100027795 Ga0097621_1000277955 375
28 3300013297 Ga0157378_10006785 Ga0157378_100067859 375
29 3300013307 Ga0157372_10117924 Ga0157372_101179242 375
30 3300014968 Ga0157379_10029904 Ga0157379_100299043 375
31 3300025208 Ga0209436_100146 Ga0209436_10014611 375
32 3300025284 Ga0209130_1000857 Ga0209130_100085714 375
33 3300025302 Ga0207426_1000033 Ga0207426_1000033325 375
34 3300026142 Ga0207698_10010165 Ga0207698_100101653 375
35 3300028800 Ga0265338_10064440 Ga0265338_100644401 375
36 3300029957 Ga0265324_10019926 Ga0265324_100199262 375
37 3300031344 Ga0265316_10001977 Ga0265316_1000197712 375
38 3300031733 Ga0316577_10061492 Ga0316577_100614922 375
39 3300037471 Ga0395905_0005497 Ga0395905_0005497_7588_8727 375
40 3300042004 Ga0439445_0000023 Ga0439445_0000023_1964_3091 375
41 3300042876 Ga0451577_0038210 Ga0451577_0038210_2520_3647 375
42 3300044712 Ga0453684_0000572 Ga0453684_0000572_35762_36889 375
43 3300044712 Ga0453684_0003949 Ga0453684_0003949_28205_29332 375
44 3300045051 Ga0451576_0004071 Ga0451576_0004071_13306_14433 375
45 3300049571 Ga0501034_0194176 Ga0501034_0194176_111_1238 375
46 iso_pu_bacteria 2904467357 2904468600 375
47 iso_pu_bacteria 2929239360 2929240844 375
48 3300003322 rootL2_10239656 rootL2_102396563 376
49 3300003794 Ga0055531_10000003 Ga0055531_10000003149 376
50 3300005614 Ga0068856_100063219 Ga0068856_1000632191 376
51 3300005834 Ga0068851_10000436 Ga0068851_100004363 376
52 3300009545 Ga0105237_10001614 Ga0105237_1000161417 376
53 3300010375 Ga0105239_10000255 Ga0105239_1000025519 376
54 3300014326 Ga0157380_10000068 Ga0157380_1000006812 376
55 3300025304 Ga0209257_1000008 Ga0209257_1000008360 376
56 3300025321 Ga0207656_10001319 Ga0207656_100013193 376
57 3300025914 Ga0207671_10006642 Ga0207671_100066425 376
58 3300025949 Ga0207667_10533582 Ga0207667_105335821 376
59 3300028800 Ga0265338_10007957 Ga0265338_100079573 376
60 3300031711 Ga0265314_10153204 Ga0265314_101532042 376
61 3300031911 Ga0307412_10022105 Ga0307412_100221053 376
62 3300042876 Ga0451577_0034649 Ga0451577_0034649_3313_4443 376
63 3300044712 Ga0453684_0025786 Ga0453684_0025786_486_1616 376
64 3300044712 Ga0453684_0168998 Ga0453684_0168998_694_1824 376
65 3300048929 Ga0496126_0021923 Ga0496126_0021923_4565_5716 376
66 3300003771 Ga0055526_1000270 Ga0055526_10002704 377
67 3300003790 Ga0055528_1000108 Ga0055528_100010845 377
68 3300003791 Ga0055530_10000279 Ga0055530_1000027938 377
69 3300009545 Ga0105237_10036222 Ga0105237_100362224 377
70 3300025273 Ga0209673_1000183 Ga0209673_100018367 377
71 3300025295 Ga0209564_1000561 Ga0209564_100056136 377
72 3300025298 Ga0209050_1001554 Ga0209050_10015544 377
73 3300025302 Ga0207426_1001332 Ga0207426_10013324 377
74 3300028800 Ga0265338_10023226 Ga0265338_100232264 377
75 3300014326 Ga0157380_10000623 Ga0157380_1000062318 378
76 3300042876 Ga0451577_0217977 Ga0451577_0217977_10_1146 378
77 3300044712 Ga0453684_0211307 Ga0453684_0211307_771_1907 378
78 3300003320 rootH2_10023940 rootH2_100239402 379
79 3300003322 rootL2_10073425 rootL2_1007342510 379
80 3300003322 rootL2_10133236 rootL2_101332363 379
81 3300003761 Ga0055535_1007579 Ga0055535_10075792 379
82 3300003794 Ga0055531_10000027 Ga0055531_10000027102 379
83 3300005262 Ga0065165_1004556 Ga0065165_10045565 379
84 3300025242 Ga0209258_100041 Ga0209258_10004192 379
85 3300025254 Ga0209148_1000090 Ga0209148_1000090143 379
86 3300025302 Ga0207426_1027879 Ga0207426_10278792 379
87 3300025304 Ga0209257_1000001 Ga0209257_10000011802 379
88 3300025929 Ga0207664_10051361 Ga0207664_100513612 379
89 3300031251 Ga0265327_10000390 Ga0265327_100003906 379
90 3300041456 Ga0451795_0275393 Ga0451795_0275393_1034_2173 379
91 3300044656 Ga0466969_0051179 Ga0466969_0051179_419_1558 379
92 3300048918 Ga0496115_0004697 Ga0496115_0004697_7649_8788 379
93 3300048929 Ga0496126_0008948 Ga0496126_0008948_8800_9939 379
94 3300053092 Ga0500583_0003367 Ga0500583_0003367_1015_2205 379
95 3300053134 Ga0500658_0038882 Ga0500658_0038882_259_1449 379
96 3300053136 Ga0500559_0003554 Ga0500559_0003554_927_2117 379
97 3300053142 Ga0500577_0003098 Ga0500577_0003098_1825_3015 379
98 3300053148 Ga0500590_042130 Ga0500590_042130_51_1241 379
99 3300053153 Ga0500616_0007492 Ga0500616_0007492_1803_2993 379
100 3300053160 Ga0500633_0000867 Ga0500633_0000867_1063_2253 379
101 3300053177 Ga0500636_0007397 Ga0500636_0007397_728_1918 379
102 iso_pu_bacteria 2818991442 2819573235 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

17

368

0.95

PF00155

Aminotran_1_2

Aminotransferase class I and II

11

311

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
7b0d-assembly1.cif.gz_B sugar transaminase from archaeoglobus veneficus 0.9769 3 377
7b0d-assembly1.cif.gz_B sugar transaminase from archaeoglobus veneficus 0.9691 3 377
3nys-assembly1.cif.gz_A x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas aeruginosa in complex with plp at 1.45 angstrom resolution 0.9687 4 370
8e75-assembly1.cif.gz_A crystal structure of pcryo_0616, the aminotransferase required to synthesize udp-n-acetyl-3-amino-d-glucosaminuronic acid (udp-glcnac3na) 0.966 4 369
3nu7-assembly1.cif.gz_A wbpe, an aminotransferase from pseudomonas aeruginosa involved in o-antigen assembly in complex with the cofactor pmp 0.9647 4 371
ID Description Score Start End Superfamily
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.964 8 250 3.40.640.10
4k2bA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9453 15 249 3.40.640.10
2ogeD01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9447 1 250 3.40.640.10
af_Q58466_257_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9436 255 376 3.90.1150.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9364 8 250 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A497CPX6-F1-model_v4 Transcriptional regulator 0.9888 8 329 GO:0000271
GO:0008483
GO:0030170
AF-X1L0T4-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9885 43 157 GO:0000271
GO:0008483
GO:0030170
AF-X0VYK0-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9862 18 157 GO:0000271
GO:0008483
GO:0030170
AF-A0A3M1CJC4-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9858 8 139 GO:0000271
GO:0008483
GO:0030170
AF-A0A1F3MHG3-F1-model_v4 Transcriptional regulator 0.9835 70 376 GO:0000271
GO:0008483
GO:0030170

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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