Scaffold Information

Sample ID 3300009101
Scaffold Ga0105247_10001449
Sample Name Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG
Length 17140
Fam Num 1
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Actinomycetota;Actinomycetes;Frankiales;Frankiaceae;Frankia;Frankia

CRISPR Details

Start Coordinate: 16053 End Coordinate: 16988
Position Repeat Spacer
16053 CGCCACGGGCGTGGGGAGGAC TTCGCCCATAGCGGCCGGCGGTGGGTGACCTCCGGATCAC
16114 CCCCACGGGCGTGGGGAGGAC AAACCTGTCCAGCAAAACAGCTAATACAGGCGCGGATCAC
16175 CCCCACGGGCGTGGGGAGGAC CGGACGTCCACGGTCGGACACCACCTGTCGAGCGGATCAC
16236 CCCCACGGGCGTGGGGAGGAC CCGGTCGGAGGCGCCCGCCGAGATCAGGGTGACGGATCAC
16297 CCCCACGGGCGTGGGGAGGAC CTGATGAGCACCTGGTTCACCGCCGACCCGCACGGATCAC
16358 CCCCACGGGCGTGGGGAGGAC TCCACACGGGGACCGGTTCGAGGGTCTCCAAGGGGATCAC
16419 CCCCACGGGCGTGGGGAGGAC AGCGGCCCGGTCGTGGCGCCGCAATCCGCGCACGGATCAC
16480 CCCCACGGGCGTGGGGAGGAC CTGATCGGTGTCTACGCCGACCTCGAGCGCGCCGGATCAC
16541 CCCCACGGGCGTGGGGAGGAC ATCCGCCACAGAGTGGCGGCGTCAACCTGCACCGGATCA
16601 CCCCACGGGCGTGGGGAGGAC GCCGAGTTCGCGGACTCGTTGACGATCGTGACCGGATCAC
16662 CCCCACGGGCGTGGGGAGGAC GACGGACCCTCGTGAGGATCGCCCAGCATCTCCGGATTAC
16723 CCCCACGGGCGTGGGGAGGAC GTCCAGCCCCTGCGTTTCAGAACGCGGACAAGCGGATCAC
16784 CCCCACGGGCGTGGGGAGGAC TCGAGCTGGTCGAGTTGGCGGTAGAGCGTGGCCGGATCAC
16845 CCCTACGGGCGTGGGGAGGAC CGTGATCGACGTGGTGGTCTTGCCCACCCCTCCGGATCAC
16906 CCCCACGGGCGTGGGGAGGAC AGCACGGCCTCGGTGAGGACGAACTCGAAGGTCGGATCAC
16967 CCCCACGGGCGTGGGGAGGAC -

PFAM Info

PFAM Domain Meaning GOTerms

Scaffold Families

F424166