|
Taxon Oid |
3300038634
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Barley rhizosphere microbial communities from Potsdam, Germany |
| Genome Name Sample Name |
Barley rhizosphere microbial communities from Potsdam, Germany - 563_E |
| Sequencing Center |
University of Dundee |
| Img Genome Id |
3300038634 |
| Ncbi Phylum |
Host-associated |
| Ncbi Class |
Plants |
| Ncbi Order |
Roots |
| Ncbi Family |
Rhizosphere |
| Ncbi Genus |
Soil |
| Ncbi Species |
Barley rhizosphere microbial communities from Potsdam, Germany |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.5.0.14 |
| Img Submission Id |
220891 |
|
Gold Analysis Project Id
|
Ga0246641
|
| Gold Analysis Project Type |
Metagenome Analysis |
|
Gold Sequencing Project Id
|
Gp0288727
|
|
Gold Study Id
|
Gs0133333
|
| Add Date |
04/02/2020 00:00:00 |
| Assembly Method |
Custom JGI assembly v. Nielsen et. al. |
| Has Coverage |
True |
| Public Release Date |
04/02/2020 00:00:00 |
| Submission Type |
Primary |
| In File |
Yes |
| Rnd Project |
True |
| Is Published |
False |
| Ncbi Bioproject Accession |
PRJEB5860 |
| Ncbi Biosample Accession |
SAMEA2796312 |
| Sequencing Method |
Illumina HiSeq 2500 |
| Sequencing Strategy |
Metagenome |
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Subtype |
Rhizosphere |
| Ecosystem Type |
Roots |
| Specific Ecosystem |
Soil |
| Cultured |
False |
| Geographic Location |
Germany: Potsdam |
| Habitat |
Barley rhizosphere |
| Isolation |
rhizosphere soil |
| Isolation Country |
8748 |
| Latitude |
52.4042 |
| Longitude |
12.9611 |
| Sample Collection Date |
2012/9 |
| Host Name |
Hordeum vulgare |
| Genome Size Assembled |
12330327 |
| Gene Count Assembled |
35671 |