|
Taxon Oid |
3300008661
|
| Ncbi Domain |
*Microbiome |
| Sequencing Status |
Complete |
| Study Name |
Microbial communities of corn and soybean rhizosphere soil from Ohio, USA |
| Genome Name Sample Name |
Microbial communities of corn rhizosphere soil from Ohio, USA - Corn_Control_1a |
| Sequencing Center |
Auburn University |
| Img Genome Id |
3300008661 |
| Ncbi Phylum |
Host-associated |
| Ncbi Class |
Plants |
| Ncbi Order |
Roots |
| Ncbi Family |
Rhizosphere |
| Ncbi Genus |
Soil |
| Ncbi Species |
Microbial communities of corn and soybean rhizosphere soil from Ohio, USA |
| Img Release Pipeline Version |
IMG Annotation Pipeline v.4.10.2 |
| Img Submission Id |
83291 |
|
Gold Analysis Project Id
|
Ga0103653
|
| Gold Analysis Project Type |
Metatranscriptome Analysis |
|
Gold Sequencing Project Id
|
Gp0126242
|
|
Gold Study Id
|
Gs0117956
|
| Add Date |
04/11/2016 00:00:00 |
| Assembly Method |
Custom JGI assembly v. Nielsen et. al. |
| Comments |
IMGSUPP-1768 |
| Has Coverage |
True |
| Public Release Date |
11/01/2018 00:00:00 |
| Submission Type |
Primary |
| In File |
Yes |
| Submitter Name |
Genome Biology Program |
| Rnd Project |
True |
| Is Published |
False |
| Ncbi Bioproject Accession |
PRJNA284764 |
| Ncbi Biosample Accession |
SAMN03801615 |
| Sequencing Method |
Illumina HiSeq 2000 |
| Sequencing Strategy |
Metatranscriptome |
| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Subtype |
Rhizosphere |
| Ecosystem Type |
Roots |
| Specific Ecosystem |
Soil |
| Cultured |
False |
| Relevance |
Agricultural |
| Geographic Location |
USA: Ohio |
| Habitat |
Rhisosphere soil |
| Isolation |
Rhisosphere soil |
| Isolation Country |
8855 |
| Sample Collection Date |
2012/4/5 |
| Host Name |
Zea mays subsp. mays |
| Genome Size Assembled |
5914430 |
| Gene Count Assembled |
20155 |