F442218

General Info

Members Datasets Scaffolds Average Seq Length
430 225 353 234

Family's Representative Sequence

Representative Sequence 3300046501|Ga0495607_0125064|Ga0495607_0125064_316_1047
Length 243
Sequence MSLFTGMNLFQWLRPRPPKPTLDKRDQQRLANLAPAAPLSENPLRQQRWVVVDLETSGLNMNRDQVLSIGAVVIEDGAIDLSQQFERTLLCPNHKVSPAVLIHGLAPSAIAAGSEPVQALLDFMEFVGESPLLAFHAPFDRHMLSRALKDSLDYRLEHHFLDVAEIAPMLFPQAGFRKAGLDDWTQFFGLHAEERHHASADALVTAELALILFSHARRQEIDSPARLDQCLNQWRRRQQSHSF

Samples

Sample ID Description Type Environment
1 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
2 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
3 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
4 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
5 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
6 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
7 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
8 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
9 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
10 2599185167 Pseudomonas sp. NFPP28 Isolate Rhizoplane
11 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
12 2599185179 Pseudomonas sp. NFR09 Isolate Rhizoplane
13 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
14 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
15 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
16 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
17 2599185191 Pseudomonas sp. NFPP24 Isolate Rhizoplane
18 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
19 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
20 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
21 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
22 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
23 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
24 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
25 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
26 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
27 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
28 2713897148 Pseudomonas fluorescens SF39a Isolate Rhizosphere
29 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
30 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
31 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
32 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
33 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
34 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
35 2738543020 Pseudomonas sp. GV054 Isolate Unclassified
36 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
37 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
38 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
39 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
40 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
41 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
42 2823421272 Pseudomonas mendocina S5.2 Isolate Rhizoplane
43 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
44 2834028612 Pseudomonas fluorescens 513 Isolate Unclassified
45 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
46 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
47 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
48 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
49 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
50 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
51 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
52 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
53 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
54 2919487758 Pseudomonas koreensis 3441 Isolate Unclassified
55 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
56 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
57 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
58 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
59 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
60 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
61 2945928738 Pseudomonas cedrina W1I11 Isolate Rhizosphere
62 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
63 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified
64 3007252601 Pseudomonas punonensis D1-6 Isolate Unclassified
65 3007315729 Pseudomonas argentinensis SA190 Isolate Unclassified
66 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
67 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
68 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
69 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
70 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
71 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
72 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
73 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
74 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
75 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
78 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
79 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
80 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
81 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
82 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
83 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
84 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
85 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
86 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
87 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
88 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
89 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
90 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
91 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
92 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
93 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
94 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
95 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
96 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
97 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
98 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
99 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
100 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
101 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
102 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
103 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
115 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
117 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
118 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
119 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
122 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
123 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
124 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
125 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
126 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
127 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
128 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
129 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
130 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
131 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
132 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
133 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
134 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
135 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
136 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
137 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
138 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
139 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
140 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
141 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
142 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
143 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
144 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
145 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
146 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
147 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
148 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
149 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
150 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
151 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
152 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
153 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
154 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
155 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
156 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
157 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
158 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
159 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
160 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
161 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
162 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
163 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
164 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
165 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
166 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
167 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
168 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
169 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
170 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
171 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
172 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
173 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
174 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
175 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
176 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
177 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
178 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
179 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
180 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
181 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
182 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
183 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
184 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
185 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
186 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
187 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
188 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
189 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
190 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
191 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
192 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
193 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
194 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
198 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
199 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
200 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
201 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
202 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
203 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
204 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
205 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
206 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
207 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
208 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
209 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
210 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
211 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
212 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
213 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
214 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
215 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
216 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
217 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
218 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
219 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere
220 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
221 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere
222 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere
223 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere
224 8056161164 Pseudomonas azadiae SWRI103 Isolate Rhizosphere
225 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.09
Metatranscriptomes 0
Isolates 17.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.28
Nodule 0.93
Rhizoplane 6.74
Rhizosphere 70.47
Stem 0
Stem Tuber 0
Unclassified 15.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000076 3300002737 Bacteria 120246
2 JGI25163J39215_1000198 3300002771 Bacteria 23415
3 JGI25163J39215_1000552 3300002771 Bacteria 10865
4 JGI25164J39214_1000083 3300002772 Bacteria 93706
5 JGI25164J39214_1000084 3300002772 Bacteria 93684
6 JGI25165J46597_1000140 3300003214 Bacteria 120246
7 JGI25165J46597_1000186 3300003214 Bacteria 93706
8 Ga0065714_10065591 3300005288 Bacteria 9262
9 Ga0065712_10000124 3300005290 Bacteria 105429
10 Ga0070670_100000368 3300005331 Bacteria 37602
11 Ga0070669_100000626 3300005353 Bacteria 26162
12 Ga0070662_100009919 3300005457 Bacteria 6240
13 Ga0068853_100000155 3300005539 Bacteria 46420
14 Ga0070664_100013561 3300005564 Bacteria 6639
15 Ga0068854_100004953 3300005578 Bacteria 8393
16 Ga0068851_10000012 3300005834 Bacteria 175130
17 Ga0075364_10130583 3300006051 Bacteria 1686
18 Ga0075362_10020394 3300006177 Bacteria 2768
19 Ga0075369_10062412 3300006186 Bacteria 1628
20 Ga0079104_1000397 3300006946 Bacteria 50359
21 Ga0099826_10009759 3300006948 Bacteria 7170
22 Ga0105251_10000087 3300009011 Bacteria 88628
23 Ga0105251_10001508 3300009011 Bacteria 20005
24 Ga0105251_10019208 3300009011 Bacteria 3616
25 Ga0105244_10000150 3300009036 Bacteria 73078
26 Ga0105244_10000711 3300009036 Bacteria 28745
27 Ga0105244_10027688 3300009036 Bacteria 3052
28 Ga0105244_10071663 3300009036 Bacteria 1727
29 Ga0105244_10103170 3300009036 Bacteria 1393
30 Ga0105243_10000177 3300009148 Bacteria 73665
31 Ga0105243_10005012 3300009148 Bacteria 10382
32 Ga0105243_10006985 3300009148 Bacteria 8694
33 Ga0105249_10071538 3300009553 Bacteria 3204
34 Ga0105246_10000617 3300011119 Bacteria 19838
35 Ga0105246_10008921 3300011119 Bacteria 6170
36 Ga0157373_10001064 3300013100 Bacteria 21105
37 Ga0157373_10003987 3300013100 Bacteria 11135
38 Ga0157373_10017782 3300013100 Bacteria 5176
39 Ga0157371_10000120 3300013102 Bacteria 119850
40 Ga0157371_10019559 3300013102 Bacteria 4991
41 Ga0157371_10025734 3300013102 Bacteria 4284
42 Ga0157371_10027467 3300013102 Bacteria 4128
43 Ga0157370_10121684 3300013104 Bacteria 2437
44 Ga0157369_10013638 3300013105 Bacteria 9193
45 Ga0157369_10297989 3300013105 Bacteria 1678
46 Ga0157369_10964660 3300013105 Bacteria 873
47 Ga0157375_10007066 3300013308 Bacteria 9804
48 Ga0157375_10062496 3300013308 Bacteria 3701
49 Ga0182008_10000629 3300014497 Bacteria 25857
50 Ga0182008_10004918 3300014497 Bacteria 7706
51 Ga0182006_1003894 3300015261 Bacteria 7481
52 Ga0182006_1012154 3300015261 Bacteria 3770
53 Ga0182007_10000408 3300015262 Bacteria 26444
54 Ga0163161_10038543 3300017792 Bacteria 3428
55 Ga0163161_10040343 3300017792 Bacteria 3353
56 Ga0163161_10138938 3300017792 Bacteria 1838
57 Ga0163161_10188982 3300017792 Bacteria 1582
58 Ga0163161_10313681 3300017792 Bacteria 1238
59 Ga0163161_10361519 3300017792 Bacteria 1156
60 Ga0209760_100098 3300025207 Bacteria 66801
61 Ga0209760_100125 3300025207 Bacteria 51169
62 Ga0207427_100005 3300025231 Bacteria 797999
63 Ga0207427_100006 3300025231 Bacteria 785415
64 Ga0209437_100013 3300025233 Bacteria 785457
65 Ga0209437_100018 3300025233 Bacteria 694400
66 Ga0209233_1000021 3300025261 Bacteria 798078
67 Ga0209233_1000022 3300025261 Bacteria 785415
68 Ga0207656_10000006 3300025321 Bacteria 395044
69 Ga0207655_1000992 3300025728 Bacteria 28937
70 Ga0207655_1001564 3300025728 Bacteria 20589
71 Ga0207655_1003274 3300025728 Bacteria 12152
72 Ga0207655_1028743 3300025728 Bacteria 2616
73 Ga0207655_1037677 3300025728 Bacteria 2126
74 Ga0207655_1100067 3300025728 Bacteria 1000
75 Ga0207713_1000081 3300025735 Bacteria 166910
76 Ga0207713_1008944 3300025735 Bacteria 5696
77 Ga0207681_10000422 3300025923 Bacteria 29446
78 Ga0207650_10000159 3300025925 Bacteria 81496
79 Ga0207706_10000290 3300025933 Bacteria 54761
80 Ga0207709_10000096 3300025935 Bacteria 136585
81 Ga0207709_10003988 3300025935 Bacteria 8606
82 Ga0207709_10062092 3300025935 Bacteria 2337
83 Ga0207679_10084958 3300025945 Bacteria 2430
84 Ga0207712_10279700 3300025961 Bacteria 1361
85 Ga0207640_10172289 3300025981 Bacteria 1614
86 Ga0207639_10001167 3300026041 Bacteria 17836
87 Ga0209281_1000019 3300027111 Bacteria 576164
88 Ga0209371_1000078 3300027312 Bacteria 190779
89 Ga0307517_10033968 3300028786 Bacteria 5830
90 Ga0268256_1000645 3300030500 Bacteria 26564
91 Ga0265316_10141147 3300031344 Bacteria 1809
92 Ga0307509_10025180 3300031507 Bacteria 6649
93 Ga0307408_100007328 3300031548 Bacteria 7298
94 Ga0307408_100051766 3300031548 Bacteria 2959
95 Ga0307405_10019530 3300031731 Bacteria 3766
96 Ga0307406_10042748 3300031901 Bacteria 2830
97 Ga0307412_10146906 3300031911 Bacteria 1734
98 Ga0439447_012406 3300041407 Bacteria 2449
99 Ga0439466_0002653 3300041411 Bacteria 6987
100 Ga0439466_0023447 3300041411 Bacteria 2170
101 Ga0439437_000217 3300042000 Bacteria 5137
102 Ga0439432_000491 3300042006 Bacteria 14756
103 Ga0439432_015733 3300042006 Bacteria 2550
104 Ga0439451_000772 3300042009 Bacteria 6094
105 Ga0439452_003115 3300042010 Bacteria 5883
106 Ga0439456_006159 3300042013 Bacteria 2443
107 Ga0439456_010935 3300042013 Bacteria 1877
108 Ga0439463_000149 3300042016 Bacteria 17859
109 Ga0439463_013042 3300042016 Bacteria 2044
110 Ga0450911_000014 3300042115 Bacteria 115031
111 Ga0450917_002558 3300042120 Bacteria 1302
112 Ga0450922_000248 3300042124 Bacteria 5792
113 Ga0450903_010686 3300042138 Bacteria 1483
114 Ga0450904_000015 3300042139 Bacteria 40837
115 Ga0450905_032006 3300042142 Bacteria 814
116 Ga0439446_0007071 3300042156 Bacteria 2941
117 Ga0439434_0118722 3300042435 Bacteria 861
118 Ga0439459_0004213 3300042438 Bacteria 2307
119 Ga0439464_0000494 3300042439 Bacteria 7990
120 Ga0450916_001633 3300042530 Bacteria 2260
121 Ga0450893_0003460 3300042532 Bacteria 2486
122 Ga0495617_007773 3300046452 Bacteria 3708
123 Ga0495617_047376 3300046452 Bacteria 1431
124 Ga0495627_000023 3300046453 Bacteria 251113
125 Ga0495627_000134 3300046453 Bacteria 88155
126 Ga0495627_042180 3300046453 Bacteria 1399
127 Ga0495627_049787 3300046453 Bacteria 1264
128 Ga0495590_0038124 3300046457 Bacteria 1675
129 Ga0495590_0074573 3300046457 Bacteria 1193
130 Ga0495591_000025 3300046458 Bacteria 189897
131 Ga0495591_001176 3300046458 Bacteria 17106
132 Ga0495591_001696 3300046458 Bacteria 13153
133 Ga0495591_001904 3300046458 Bacteria 12248
134 Ga0495591_002765 3300046458 Bacteria 9471
135 Ga0495591_005373 3300046458 Bacteria 5949
136 Ga0495638_0007928 3300046460 Bacteria 7575
137 Ga0495638_0020436 3300046460 Bacteria 4376
138 Ga0495650_0003726 3300046471 Bacteria 10899
139 Ga0495650_0008239 3300046471 Bacteria 6117
140 Ga0495650_0008796 3300046471 Bacteria 5836
141 Ga0495650_0012960 3300046471 Bacteria 4446
142 Ga0495605_0000019 3300046474 Bacteria 270010
143 Ga0495605_0000213 3300046474 Bacteria 71485
144 Ga0495605_0000769 3300046474 Bacteria 23154
145 Ga0495605_0000952 3300046474 Bacteria 19727
146 Ga0495605_0004082 3300046474 Bacteria 8614
147 Ga0495605_0008606 3300046474 Bacteria 5765
148 Ga0495605_0070310 3300046474 Bacteria 1655
149 Ga0495605_0183971 3300046474 Bacteria 917
150 Ga0495584_0005241 3300046491 Bacteria 6874
151 Ga0495584_0274823 3300046491 Bacteria 856
152 Ga0495585_0087364 3300046492 Bacteria 1683
153 Ga0495585_0161053 3300046492 Bacteria 1164
154 Ga0495594_0036434 3300046499 Bacteria 2682
155 Ga0495596_0006354 3300046500 Bacteria 5447
156 Ga0495607_0000069 3300046501 Bacteria 101754
157 Ga0495607_0000198 3300046501 Bacteria 63936
158 Ga0495607_0000568 3300046501 Bacteria 36024
159 Ga0495607_0001068 3300046501 Bacteria 25025
160 Ga0495607_0003172 3300046501 Bacteria 12738
161 Ga0495607_0005141 3300046501 Bacteria 9450
162 Ga0495607_0005735 3300046501 Bacteria 8838
163 Ga0495607_0023064 3300046501 Bacteria 3900
164 Ga0495607_0062975 3300046501 Bacteria 2100
165 Ga0495607_0125064 3300046501 Bacteria 1345
166 Ga0495607_0260980 3300046501 Bacteria 829
167 Ga0495607_0277523 3300046501 Bacteria 796
168 Ga0495583_0000097 3300046506 Bacteria 149533
169 Ga0495583_0000699 3300046506 Bacteria 43234
170 Ga0495583_0002443 3300046506 Bacteria 15871
171 Ga0495583_0002870 3300046506 Bacteria 14008
172 Ga0495583_0003018 3300046506 Bacteria 13422
173 Ga0495583_0004174 3300046506 Bacteria 10525
174 Ga0495583_0004477 3300046506 Bacteria 9986
175 Ga0495606_0000237 3300046507 Bacteria 97568
176 Ga0495606_0003244 3300046507 Bacteria 17460
177 Ga0495606_0007134 3300046507 Bacteria 10098
178 Ga0495606_0020426 3300046507 Bacteria 4882
179 Ga0495606_0179139 3300046507 Bacteria 1223
180 Ga0495610_0003063 3300046512 Bacteria 13358
181 Ga0495610_0006743 3300046512 Bacteria 7800
182 Ga0495610_0009849 3300046512 Bacteria 5986
183 Ga0495610_0033296 3300046512 Bacteria 2666
184 Ga0495610_0116582 3300046512 Bacteria 1176
185 Ga0495610_0147516 3300046512 Bacteria 1007
186 Ga0495616_0077404 3300046513 Bacteria 1596
187 Ga0495616_0113902 3300046513 Bacteria 1254
188 Ga0495620_0000163 3300046515 Bacteria 53016
189 Ga0495620_0001132 3300046515 Bacteria 16268
190 Ga0495620_0001236 3300046515 Bacteria 15611
191 Ga0495620_0036423 3300046515 Bacteria 2202
192 Ga0495620_0055123 3300046515 Bacteria 1676
193 Ga0495631_0003160 3300046518 Bacteria 9061
194 Ga0495631_0005591 3300046518 Bacteria 6568
195 Ga0495631_0031874 3300046518 Bacteria 2379
196 Ga0495632_0001420 3300046519 Bacteria 19957
197 Ga0495632_0003250 3300046519 Bacteria 11645
198 Ga0495632_0010558 3300046519 Bacteria 5453
199 Ga0495632_0031082 3300046519 Bacteria 2765
200 Ga0495637_0000333 3300046520 Bacteria 36498
201 Ga0495637_0001013 3300046520 Bacteria 17686
202 Ga0495637_0004590 3300046520 Bacteria 7138
203 Ga0495637_0008425 3300046520 Bacteria 5067
204 Ga0495637_0017807 3300046520 Bacteria 3302
205 Ga0495637_0026678 3300046520 Bacteria 2590
206 Ga0495637_0062845 3300046520 Bacteria 1518
207 Ga0495643_0000486 3300046522 Bacteria 50242
208 Ga0495643_0003087 3300046522 Bacteria 12502
209 Ga0495643_0009409 3300046522 Bacteria 6076
210 Ga0495643_0021260 3300046522 Bacteria 3725
211 Ga0495644_0002413 3300046523 Bacteria 7452
212 Ga0495648_0001458 3300046524 Bacteria 23133
213 Ga0495648_0010445 3300046524 Bacteria 7070
214 Ga0495648_0059626 3300046524 Bacteria 2275
215 Ga0495648_0099154 3300046524 Bacteria 1612
216 Ga0495652_0094264 3300046529 Bacteria 2442
217 Ga0495654_0000409 3300046530 Bacteria 36562
218 Ga0495654_0000778 3300046530 Bacteria 24597
219 Ga0495654_0003897 3300046530 Bacteria 9020
220 Ga0495654_0013713 3300046530 Bacteria 4332
221 Ga0495654_0015816 3300046530 Bacteria 4001
222 Ga0495654_0063057 3300046530 Bacteria 1775
223 Ga0495654_0107615 3300046530 Bacteria 1275
224 Ga0495609_0000057 3300046538 Bacteria 143793
225 Ga0495609_0000129 3300046538 Bacteria 81474
226 Ga0495609_0000374 3300046538 Bacteria 38378
227 Ga0495609_0012975 3300046538 Bacteria 3942
228 Ga0495609_0051096 3300046538 Bacteria 1841
229 Ga0495597_0000068 3300046542 Bacteria 90143
230 Ga0495597_0001472 3300046542 Bacteria 16864
231 Ga0495597_0201644 3300046542 Bacteria 797
232 Ga0495645_0406560 3300046543 Bacteria 866
233 Ga0495622_0008516 3300046557 Bacteria 4752
234 Ga0495633_0000038 3300046558 Bacteria 182144
235 Ga0495668_0007066 3300046616 Bacteria 7229
236 Ga0495668_0028694 3300046616 Bacteria 3146
237 Ga0495668_0034599 3300046616 Bacteria 2833
238 Ga0495611_0001676 3300046648 Bacteria 10730
239 Ga0495611_0002091 3300046648 Bacteria 9382
240 Ga0495611_0002660 3300046648 Bacteria 8066
241 Ga0495625_0000027 3300046660 Bacteria 258545
242 Ga0495625_0039703 3300046660 Bacteria 3436
243 Ga0495661_0000079 3300046665 Bacteria 117662
244 Ga0495661_0000174 3300046665 Bacteria 74521
245 Ga0495661_0000342 3300046665 Bacteria 50929
246 Ga0495661_0002795 3300046665 Bacteria 13223
247 Ga0495661_0015442 3300046665 Bacteria 5097
248 Ga0495661_0029729 3300046665 Bacteria 3485
249 Ga0495670_0001645 3300046691 Bacteria 10939
250 Ga0495670_0047538 3300046691 Bacteria 2145
251 Ga0495671_0000860 3300046692 Bacteria 21697
252 Ga0495671_0003708 3300046692 Bacteria 9291
253 Ga0495671_0023793 3300046692 Bacteria 3198
254 Ga0495671_0068304 3300046692 Bacteria 1747
255 Ga0495649_0021783 3300046694 Bacteria 3590
256 Ga0495649_0047160 3300046694 Bacteria 2343
257 Ga0495649_0094796 3300046694 Bacteria 1588
258 Ga0495589_0001539 3300046794 Bacteria 13284
259 Ga0495660_0000761 3300046810 Bacteria 24239
260 Ga0495660_0003508 3300046810 Bacteria 9679
261 Ga0495660_0011788 3300046810 Bacteria 5069
262 Ga0495660_0016976 3300046810 Bacteria 4192
263 Ga0495660_0276086 3300046810 Bacteria 770
264 Ga0495672_0001187 3300047320 Bacteria 26409
265 Ga0495672_0005914 3300047320 Bacteria 9587
266 Ga0495672_0008671 3300047320 Bacteria 7468
267 Ga0495672_0010186 3300047320 Bacteria 6718
268 Ga0495672_0024546 3300047320 Bacteria 3880
269 Ga0495672_0048581 3300047320 Bacteria 2515
270 Ga0495676_0000012 3300047321 Bacteria 230043
271 Ga0495683_0000032 3300047323 Bacteria 149612
272 Ga0495687_001410 3300047443 Bacteria 22145
273 Ga0495679_000070 3300047446 Bacteria 98402
274 Ga0495679_000516 3300047446 Bacteria 27378
275 Ga0495679_000721 3300047446 Bacteria 21281
276 Ga0495679_001750 3300047446 Bacteria 11932
277 Ga0495673_0000972 3300047469 Bacteria 25751
278 Ga0495673_0001703 3300047469 Bacteria 16856
279 Ga0495673_0004243 3300047469 Bacteria 9047
280 Ga0495673_0004314 3300047469 Bacteria 8955
281 Ga0495673_0005260 3300047469 Bacteria 7858
282 Ga0495673_0006040 3300047469 Bacteria 7192
283 Ga0495673_0011619 3300047469 Bacteria 4723
284 Ga0495673_0014947 3300047469 Bacteria 4019
285 Ga0495673_0015836 3300047469 Bacteria 3873
286 Ga0495673_0039645 3300047469 Bacteria 2135
287 Ga0495673_0041961 3300047469 Bacteria 2056
288 Ga0495673_0053637 3300047469 Bacteria 1757
289 Ga0495681_0002106 3300047470 Bacteria 14467
290 Ga0495681_0017911 3300047470 Bacteria 3919
291 Ga0495681_0025580 3300047470 Bacteria 3086
292 Ga0495681_0105575 3300047470 Bacteria 1226
293 Ga0495686_0160564 3300047472 Bacteria 1313
294 Ga0495686_0257606 3300047472 Bacteria 978
295 Ga0495626_0000109 3300048091 Bacteria 107703
296 Ga0496112_0119912 3300048915 Bacteria 2600
297 Ga0496112_0219801 3300048915 Bacteria 1856
298 Ga0496113_0564948 3300048916 Bacteria 912
299 Ga0496116_0000672 3300048919 Bacteria 44516
300 Ga0496116_0112180 3300048919 Bacteria 1599
301 Ga0496117_0002314 3300048920 Bacteria 24432
302 Ga0496117_0050565 3300048920 Bacteria 2946
303 Ga0496117_0138694 3300048920 Bacteria 1460
304 Ga0496117_0169239 3300048920 Bacteria 1270
305 Ga0496118_0028046 3300048921 Bacteria 4751
306 Ga0496118_0132638 3300048921 Bacteria 1596
307 Ga0496118_0134520 3300048921 Bacteria 1580
308 Ga0496118_0173414 3300048921 Bacteria 1314
309 Ga0496120_0037886 3300048923 Bacteria 2857
310 Ga0496121_0001388 3300048924 Bacteria 40962
311 Ga0496121_0002296 3300048924 Bacteria 29681
312 Ga0496121_0003076 3300048924 Bacteria 24160
313 Ga0496121_0090696 3300048924 Bacteria 2388
314 Ga0496122_0000370 3300048925 Bacteria 96422
315 Ga0496122_0006939 3300048925 Bacteria 12773
316 Ga0496122_0013797 3300048925 Bacteria 7871
317 Ga0496122_0043287 3300048925 Bacteria 3529
318 Ga0496122_0044652 3300048925 Bacteria 3455
319 Ga0496122_0095727 3300048925 Bacteria 2005
320 Ga0496122_0194110 3300048925 Bacteria 1195
321 Ga0496123_0000135 3300048926 Bacteria 153056
322 Ga0496123_0004143 3300048926 Bacteria 15509
323 Ga0496123_0013166 3300048926 Bacteria 6973
324 Ga0496123_0018971 3300048926 Bacteria 5439
325 Ga0496123_0096001 3300048926 Bacteria 1742
326 Ga0496124_0000407 3300048927 Bacteria 78013
327 Ga0496124_0013627 3300048927 Bacteria 7926
328 Ga0496124_0033081 3300048927 Bacteria 4553
329 Ga0496124_0045239 3300048927 Bacteria 3774
330 Ga0496124_0133640 3300048927 Bacteria 1967
331 Ga0496124_0139053 3300048927 Bacteria 1918
332 Ga0496125_0002716 3300048928 Bacteria 22480
333 Ga0496125_0016015 3300048928 Bacteria 7218
334 Ga0496125_0047143 3300048928 Bacteria 3607
335 Ga0496125_0254155 3300048928 Bacteria 1106
336 Ga0496126_0013806 3300048929 Bacteria 8190
337 Ga0495678_000046 3300049459 Bacteria 171703
338 Ga0495678_000541 3300049459 Bacteria 36468
339 Ga0495678_002265 3300049459 Bacteria 13345
340 Ga0495678_003529 3300049459 Bacteria 9606
341 Ga0495678_010814 3300049459 Bacteria 4407
342 Ga0495682_0000098 3300049460 Bacteria 77089
343 Ga0495682_0000463 3300049460 Bacteria 28034
344 Ga0501226_000001 3300049853 Bacteria 432595
345 nmdc:mga03683_32788_c1 3300050489 Bacteria 2092
346 nmdc:mga00v17_145696_c1 3300050491 Bacteria 1520
347 nmdc:mga00v17_73291_c1 3300050491 Bacteria 2126
348 nmdc:mga0sz30_101359_c1 3300050516 Bacteria 1258
349 Ga0500618_001326 3300053125 Bacteria 11298
350 Ga0500573_0099463 3300053140 Bacteria 1638
351 Ga0500577_0100092 3300053142 Bacteria 1184
352 Ga0500586_042526 3300053145 Bacteria 1546
353 Ga0500634_0001758 3300053161 Bacteria 8695

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006946 Ga0079104_1000397 Ga0079104_10003977 198
2 3300006948 Ga0099826_10009759 Ga0099826_100097592 198
3 3300027111 Ga0209281_1000019 Ga0209281_1000019445 198
4 3300053125 Ga0500618_001326 Ga0500618_001326_9547_10215 208
5 iso_pu_bacteria 2808606373 2808905548 211
6 3300048929 Ga0496126_0013806 Ga0496126_0013806_2745_3434 215
7 iso_pu_bacteria 2600254954 2600445905 215
8 iso_pu_bacteria 2600255389 2602011275 215
9 iso_pu_bacteria 2728369097 2729148630 215
10 iso_pu_bacteria 2823421272 2823421812 215
11 iso_pu_bacteria 2919501602 2919506407 215
12 iso_pu_bacteria 2926063275 2926068127 215
13 iso_pu_bacteria 640427133 640489842 215
14 iso_pu_bacteria 651053060 651177898 215
15 iso_pu_bacteria 8034962539 8034966391 215
16 3300042000 Ga0439437_000217 Ga0439437_000217_3005_3703 216
17 3300042013 Ga0439456_006159 Ga0439456_006159_772_1470 216
18 3300042115 Ga0450911_000014 Ga0450911_000014_41349_42047 216
19 3300042120 Ga0450917_002558 Ga0450917_002558_166_864 216
20 3300042138 Ga0450903_010686 Ga0450903_010686_344_1039 216
21 3300042139 Ga0450904_000015 Ga0450904_000015_25338_26033 216
22 3300042156 Ga0439446_0007071 Ga0439446_0007071_419_1117 216
23 3300042435 Ga0439434_0118722 Ga0439434_0118722_79_777 216
24 3300042438 Ga0439459_0004213 Ga0439459_0004213_1029_1727 216
25 3300042530 Ga0450916_001633 Ga0450916_001633_292_990 216
26 3300042532 Ga0450893_0003460 Ga0450893_0003460_1249_1947 216
27 3300049853 Ga0501226_000001 Ga0501226_000001_74028_74723 216
28 iso_pu_bacteria 2738543020 2739289722 216
29 iso_pu_bacteria 2738543021 2739295034 216
30 iso_pu_bacteria 2811994881 2812369265 216
31 iso_pu_bacteria 2923519811 2923523350 216
32 iso_pu_bacteria 2990196909 2990199546 216
33 iso_pu_bacteria 2554235341 2555672598 217
34 iso_pu_bacteria 2599185155 2599330747 217
35 iso_pu_bacteria 2599185160 2599356197 217
36 iso_pu_bacteria 2599185161 2599362405 217
37 iso_pu_bacteria 2599185162 2599369289 217
38 iso_pu_bacteria 2599185163 2599375514 217
39 iso_pu_bacteria 2599185164 2599381303 217
40 iso_pu_bacteria 2599185165 2599387181 217
41 iso_pu_bacteria 2599185166 2599394372 217
42 iso_pu_bacteria 2599185167 2599400769 217
43 iso_pu_bacteria 2599185168 2599406137 217
44 iso_pu_bacteria 2599185179 2599450096 217
45 iso_pu_bacteria 2599185181 2599463031 217
46 iso_pu_bacteria 2599185182 2599467550 217
47 iso_pu_bacteria 2599185186 2599492048 217
48 iso_pu_bacteria 2599185190 2599512168 217
49 iso_pu_bacteria 2599185191 2599517149 217
50 iso_pu_bacteria 2599185290 2599892470 217
51 iso_pu_bacteria 2599185307 2599975521 217
52 iso_pu_bacteria 2599185356 2600215657 217
53 iso_pu_bacteria 2600255283 2601628469 217
54 iso_pu_bacteria 2600255313 2601775824 217
55 iso_pu_bacteria 2619619299 2621297063 217
56 iso_pu_bacteria 2667528171 2671099044 217
57 iso_pu_bacteria 2675903420 2677896903 217
58 iso_pu_bacteria 2713897148 2715750048 217
59 iso_pu_bacteria 2738541265 2738671884 217
60 iso_pu_bacteria 2738541271 2738690261 217
61 iso_pu_bacteria 2738541282 2738750278 217
62 iso_pu_bacteria 2738541303 2738859318 217
63 iso_pu_bacteria 2738543016 2739266035 217
64 iso_pu_bacteria 2808606379 2808942038 217
65 iso_pu_bacteria 2816332298 2817493823 217
66 iso_pu_bacteria 2818991464 2819704166 217
67 iso_pu_bacteria 2826581358 2826582021 217
68 iso_pu_bacteria 2834028612 2834030723 217
69 iso_pu_bacteria 2842805378 2842807269 217
70 iso_pu_bacteria 2842815866 2842819379 217
71 iso_pu_bacteria 2842849001 2842852356 217
72 iso_pu_bacteria 2842854478 2842855393 217
73 iso_pu_bacteria 2844665904 2844666766 217
74 iso_pu_bacteria 2860867994 2860872809 217
75 iso_pu_bacteria 2908446538 2908452343 217
76 iso_pu_bacteria 2913036834 2913042329 217
77 iso_pu_bacteria 2917070673 2917076489 217
78 iso_pu_bacteria 2919487758 2919488382 217
79 iso_pu_bacteria 2929189879 2929194921 217
80 iso_pu_bacteria 2931390751 2931396193 217
81 iso_pu_bacteria 2935353572 2935358538 217
82 iso_pu_bacteria 2945928738 2945931139 217
83 iso_pu_bacteria 2946006987 2946007166 217
84 iso_pu_bacteria 3007252601 3007254348 217
85 iso_pu_bacteria 3007315729 3007316852 217
86 iso_pu_bacteria 3007395558 3007398947 217
87 iso_pu_bacteria 637000220 637323038 217
88 iso_pu_bacteria 8019769354 8019770009 217
89 iso_pu_bacteria 8054285046 8054291609 217
90 iso_pu_bacteria 8055817908 8055823668 217
91 iso_pu_bacteria 8055878733 8055879378 217
92 iso_pu_bacteria 8056143049 8056148540 217
93 iso_pu_bacteria 8056161164 8056163393 217
94 iso_pu_bacteria 8057798959 8057801692 217
95 3300046501 Ga0495607_0003172 Ga0495607_0003172_4306_5007 219
96 3300046512 Ga0495610_0116582 Ga0495610_0116582_285_986 219
97 3300046530 Ga0495654_0107615 Ga0495654_0107615_479_1180 219
98 3300046665 Ga0495661_0002795 Ga0495661_0002795_4814_5515 219
99 3300046810 Ga0495660_0016976 Ga0495660_0016976_1390_2100 219
100 3300047446 Ga0495679_000721 Ga0495679_000721_4833_5534 219
101 3300047446 Ga0495679_001750 Ga0495679_001750_7588_8289 219
102 3300048920 Ga0496117_0050565 Ga0496117_0050565_1282_1983 219
103 3300048920 Ga0496117_0138694 Ga0496117_0138694_557_1258 219
104 3300048921 Ga0496118_0132638 Ga0496118_0132638_599_1300 219
105 3300048923 Ga0496120_0037886 Ga0496120_0037886_1286_1987 219
106 3300048924 Ga0496121_0090696 Ga0496121_0090696_473_1174 219
107 3300048925 Ga0496122_0095727 Ga0496122_0095727_146_847 219
108 3300048927 Ga0496124_0133640 Ga0496124_0133640_317_1018 219
109 3300048928 Ga0496125_0047143 Ga0496125_0047143_1943_2644 219
110 3300053161 Ga0500634_0001758 Ga0500634_0001758_282_983 219
111 3300017792 Ga0163161_10040343 Ga0163161_100403432 220
112 3300046453 Ga0495627_000134 Ga0495627_000134_21761_22465 220
113 3300046471 Ga0495650_0012960 Ga0495650_0012960_1572_2276 220
114 3300046518 Ga0495631_0003160 Ga0495631_0003160_4179_4883 220
115 3300046522 Ga0495643_0000486 Ga0495643_0000486_30503_31210 220
116 3300046530 Ga0495654_0013713 Ga0495654_0013713_54_761 220
117 3300046660 Ga0495625_0039703 Ga0495625_0039703_1213_1920 220
118 3300046692 Ga0495671_0000860 Ga0495671_0000860_15189_15896 220
119 3300046692 Ga0495671_0068304 Ga0495671_0068304_259_963 220
120 3300046694 Ga0495649_0094796 Ga0495649_0094796_636_1343 220
121 3300047320 Ga0495672_0001187 Ga0495672_0001187_8253_8957 220
122 3300002737 JGI25162J39368_1000076 JGI25162J39368_100007666 221
123 3300002771 JGI25163J39215_1000198 JGI25163J39215_100019822 221
124 3300002771 JGI25163J39215_1000552 JGI25163J39215_10005527 221
125 3300002772 JGI25164J39214_1000083 JGI25164J39214_10000836 221
126 3300002772 JGI25164J39214_1000084 JGI25164J39214_100008466 221
127 3300003214 JGI25165J46597_1000140 JGI25165J46597_100014039 221
128 3300003214 JGI25165J46597_1000186 JGI25165J46597_100018681 221
129 3300005288 Ga0065714_10065591 Ga0065714_100655913 221
130 3300005290 Ga0065712_10000124 Ga0065712_1000012499 221
131 3300005331 Ga0070670_100000368 Ga0070670_10000036817 221
132 3300005353 Ga0070669_100000626 Ga0070669_10000062621 221
133 3300005457 Ga0070662_100009919 Ga0070662_1000099194 221
134 3300005539 Ga0068853_100000155 Ga0068853_10000015542 221
135 3300005564 Ga0070664_100013561 Ga0070664_1000135614 221
136 3300005578 Ga0068854_100004953 Ga0068854_1000049532 221
137 3300005834 Ga0068851_10000012 Ga0068851_1000001230 221
138 3300006051 Ga0075364_10130583 Ga0075364_101305832 221
139 3300006177 Ga0075362_10020394 Ga0075362_100203942 221
140 3300006186 Ga0075369_10062412 Ga0075369_100624122 221
141 3300009011 Ga0105251_10000087 Ga0105251_1000008732 221
142 3300009011 Ga0105251_10001508 Ga0105251_1000150816 221
143 3300009011 Ga0105251_10019208 Ga0105251_100192083 221
144 3300009036 Ga0105244_10000150 Ga0105244_1000015042 221
145 3300009036 Ga0105244_10000711 Ga0105244_1000071118 221
146 3300009036 Ga0105244_10027688 Ga0105244_100276882 221
147 3300009036 Ga0105244_10071663 Ga0105244_100716632 221
148 3300009036 Ga0105244_10103170 Ga0105244_101031701 221
149 3300009148 Ga0105243_10000177 Ga0105243_1000017743 221
150 3300009148 Ga0105243_10005012 Ga0105243_100050122 221
151 3300009148 Ga0105243_10006985 Ga0105243_100069854 221
152 3300009553 Ga0105249_10071538 Ga0105249_100715383 221
153 3300011119 Ga0105246_10000617 Ga0105246_100006174 221
154 3300011119 Ga0105246_10008921 Ga0105246_100089214 221
155 3300013100 Ga0157373_10001064 Ga0157373_100010642 221
156 3300013100 Ga0157373_10003987 Ga0157373_100039877 221
157 3300013100 Ga0157373_10017782 Ga0157373_100177824 221
158 3300013102 Ga0157371_10000120 Ga0157371_1000012047 221
159 3300013102 Ga0157371_10019559 Ga0157371_100195593 221
160 3300013102 Ga0157371_10025734 Ga0157371_100257342 221
161 3300013102 Ga0157371_10027467 Ga0157371_100274673 221
162 3300013104 Ga0157370_10121684 Ga0157370_101216843 221
163 3300013105 Ga0157369_10013638 Ga0157369_100136382 221
164 3300013105 Ga0157369_10297989 Ga0157369_102979892 221
165 3300013105 Ga0157369_10964660 Ga0157369_109646601 221
166 3300013308 Ga0157375_10007066 Ga0157375_100070664 221
167 3300013308 Ga0157375_10062496 Ga0157375_100624963 221
168 3300014497 Ga0182008_10000629 Ga0182008_100006294 221
169 3300014497 Ga0182008_10004918 Ga0182008_100049182 221
170 3300015261 Ga0182006_1003894 Ga0182006_10038944 221
171 3300015261 Ga0182006_1012154 Ga0182006_10121542 221
172 3300015262 Ga0182007_10000408 Ga0182007_100004085 221
173 3300017792 Ga0163161_10038543 Ga0163161_100385432 221
174 3300017792 Ga0163161_10138938 Ga0163161_101389382 221
175 3300017792 Ga0163161_10188982 Ga0163161_101889822 221
176 3300017792 Ga0163161_10313681 Ga0163161_103136811 221
177 3300017792 Ga0163161_10361519 Ga0163161_103615192 221
178 3300025207 Ga0209760_100098 Ga0209760_1000987 221
179 3300025207 Ga0209760_100125 Ga0209760_10012540 221
180 3300025231 Ga0207427_100005 Ga0207427_10000596 221
181 3300025231 Ga0207427_100006 Ga0207427_100006653 221
182 3300025233 Ga0209437_100013 Ga0209437_100013653 221
183 3300025233 Ga0209437_100018 Ga0209437_1000186 221
184 3300025261 Ga0209233_1000021 Ga0209233_100002196 221
185 3300025261 Ga0209233_1000022 Ga0209233_1000022653 221
186 3300025321 Ga0207656_10000006 Ga0207656_10000006286 221
187 3300025728 Ga0207655_1000992 Ga0207655_100099221 221
188 3300025728 Ga0207655_1001564 Ga0207655_10015649 221
189 3300025728 Ga0207655_1003274 Ga0207655_100327410 221
190 3300025728 Ga0207655_1028743 Ga0207655_10287432 221
191 3300025728 Ga0207655_1037677 Ga0207655_10376772 221
192 3300025728 Ga0207655_1100067 Ga0207655_11000672 221
193 3300025735 Ga0207713_1000081 Ga0207713_100008195 221
194 3300025735 Ga0207713_1008944 Ga0207713_10089441 221
195 3300025923 Ga0207681_10000422 Ga0207681_1000042226 221
196 3300025925 Ga0207650_10000159 Ga0207650_1000015952 221
197 3300025933 Ga0207706_10000290 Ga0207706_1000029046 221
198 3300025935 Ga0207709_10000096 Ga0207709_1000009683 221
199 3300025935 Ga0207709_10003988 Ga0207709_100039885 221
200 3300025935 Ga0207709_10062092 Ga0207709_100620922 221
201 3300025945 Ga0207679_10084958 Ga0207679_100849582 221
202 3300025961 Ga0207712_10279700 Ga0207712_102797002 221
203 3300025981 Ga0207640_10172289 Ga0207640_101722891 221
204 3300026041 Ga0207639_10001167 Ga0207639_100011672 221
205 3300027312 Ga0209371_1000078 Ga0209371_100007817 221
206 3300028786 Ga0307517_10033968 Ga0307517_100339682 221
207 3300030500 Ga0268256_1000645 Ga0268256_100064514 221
208 3300031344 Ga0265316_10141147 Ga0265316_101411472 221
209 3300031507 Ga0307509_10025180 Ga0307509_100251805 221
210 3300031548 Ga0307408_100007328 Ga0307408_1000073284 221
211 3300031548 Ga0307408_100051766 Ga0307408_1000517662 221
212 3300031731 Ga0307405_10019530 Ga0307405_100195302 221
213 3300031901 Ga0307406_10042748 Ga0307406_100427481 221
214 3300031911 Ga0307412_10146906 Ga0307412_101469062 221
215 3300041407 Ga0439447_012406 Ga0439447_012406_697_1404 221
216 3300041411 Ga0439466_0002653 Ga0439466_0002653_4768_5475 221
217 3300041411 Ga0439466_0023447 Ga0439466_0023447_391_1104 221
218 3300042006 Ga0439432_000491 Ga0439432_000491_10473_11180 221
219 3300042006 Ga0439432_015733 Ga0439432_015733_660_1367 221
220 3300042009 Ga0439451_000772 Ga0439451_000772_4311_5018 221
221 3300042010 Ga0439452_003115 Ga0439452_003115_4719_5426 221
222 3300042013 Ga0439456_010935 Ga0439456_010935_643_1350 221
223 3300042016 Ga0439463_000149 Ga0439463_000149_12291_13010 221
224 3300042016 Ga0439463_013042 Ga0439463_013042_174_893 221
225 3300042124 Ga0450922_000248 Ga0450922_000248_4120_4827 221
226 3300042142 Ga0450905_032006 Ga0450905_032006_63_782 221
227 3300042439 Ga0439464_0000494 Ga0439464_0000494_4914_5621 221
228 3300046452 Ga0495617_007773 Ga0495617_007773_1338_2045 221
229 3300046452 Ga0495617_047376 Ga0495617_047376_510_1229 221
230 3300046453 Ga0495627_000023 Ga0495627_000023_181291_182004 221
231 3300046453 Ga0495627_042180 Ga0495627_042180_81_800 221
232 3300046453 Ga0495627_049787 Ga0495627_049787_521_1228 221
233 3300046457 Ga0495590_0038124 Ga0495590_0038124_633_1340 221
234 3300046457 Ga0495590_0074573 Ga0495590_0074573_44_763 221
235 3300046458 Ga0495591_000025 Ga0495591_000025_124920_125633 221
236 3300046458 Ga0495591_001176 Ga0495591_001176_13072_13791 221
237 3300046458 Ga0495591_001696 Ga0495591_001696_2268_2987 221
238 3300046458 Ga0495591_001904 Ga0495591_001904_796_1515 221
239 3300046458 Ga0495591_002765 Ga0495591_002765_6026_6745 221
240 3300046458 Ga0495591_005373 Ga0495591_005373_1530_2243 221
241 3300046460 Ga0495638_0007928 Ga0495638_0007928_1836_2543 221
242 3300046460 Ga0495638_0020436 Ga0495638_0020436_2978_3700 221
243 3300046471 Ga0495650_0003726 Ga0495650_0003726_6769_7488 221
244 3300046471 Ga0495650_0008239 Ga0495650_0008239_2608_3327 221
245 3300046471 Ga0495650_0008796 Ga0495650_0008796_2671_3384 221
246 3300046474 Ga0495605_0000019 Ga0495605_0000019_86569_87282 221
247 3300046474 Ga0495605_0000213 Ga0495605_0000213_55307_56026 221
248 3300046474 Ga0495605_0000769 Ga0495605_0000769_3268_3987 221
249 3300046474 Ga0495605_0000952 Ga0495605_0000952_2827_3546 221
250 3300046474 Ga0495605_0004082 Ga0495605_0004082_4599_5312 221
251 3300046474 Ga0495605_0008606 Ga0495605_0008606_3134_3847 221
252 3300046474 Ga0495605_0070310 Ga0495605_0070310_416_1135 221
253 3300046474 Ga0495605_0183971 Ga0495605_0183971_69_788 221
254 3300046491 Ga0495584_0005241 Ga0495584_0005241_1693_2412 221
255 3300046491 Ga0495584_0274823 Ga0495584_0274823_10_729 221
256 3300046492 Ga0495585_0087364 Ga0495585_0087364_930_1637 221
257 3300046492 Ga0495585_0161053 Ga0495585_0161053_29_736 221
258 3300046499 Ga0495594_0036434 Ga0495594_0036434_1523_2236 221
259 3300046500 Ga0495596_0006354 Ga0495596_0006354_3279_3998 221
260 3300046501 Ga0495607_0000069 Ga0495607_0000069_50354_51067 221
261 3300046501 Ga0495607_0000198 Ga0495607_0000198_47188_47907 221
262 3300046501 Ga0495607_0000568 Ga0495607_0000568_10237_10956 221
263 3300046501 Ga0495607_0001068 Ga0495607_0001068_8429_9142 221
264 3300046501 Ga0495607_0005141 Ga0495607_0005141_6296_7015 221
265 3300046501 Ga0495607_0005735 Ga0495607_0005735_5158_5877 221
266 3300046501 Ga0495607_0023064 Ga0495607_0023064_2798_3517 221
267 3300046501 Ga0495607_0062975 Ga0495607_0062975_279_998 221
268 3300046501 Ga0495607_0125064 Ga0495607_0125064_316_1047 221
269 3300046501 Ga0495607_0260980 Ga0495607_0260980_17_736 221
270 3300046501 Ga0495607_0277523 Ga0495607_0277523_61_780 221
271 3300046506 Ga0495583_0000097 Ga0495583_0000097_62560_63273 221
272 3300046506 Ga0495583_0000699 Ga0495583_0000699_36456_37175 221
273 3300046506 Ga0495583_0002443 Ga0495583_0002443_10561_11268 221
274 3300046506 Ga0495583_0002870 Ga0495583_0002870_10054_10773 221
275 3300046506 Ga0495583_0003018 Ga0495583_0003018_2689_3408 221
276 3300046506 Ga0495583_0004174 Ga0495583_0004174_4040_4759 221
277 3300046506 Ga0495583_0004477 Ga0495583_0004477_6166_6885 221
278 3300046507 Ga0495606_0000237 Ga0495606_0000237_59619_60338 221
279 3300046507 Ga0495606_0003244 Ga0495606_0003244_13484_14203 221
280 3300046507 Ga0495606_0007134 Ga0495606_0007134_5173_5880 221
281 3300046507 Ga0495606_0020426 Ga0495606_0020426_1111_1818 221
282 3300046507 Ga0495606_0179139 Ga0495606_0179139_324_1031 221
283 3300046512 Ga0495610_0003063 Ga0495610_0003063_7764_8471 221
284 3300046512 Ga0495610_0006743 Ga0495610_0006743_4410_5129 221
285 3300046512 Ga0495610_0009849 Ga0495610_0009849_3128_3847 221
286 3300046512 Ga0495610_0033296 Ga0495610_0033296_1238_1945 221
287 3300046512 Ga0495610_0147516 Ga0495610_0147516_227_946 221
288 3300046513 Ga0495616_0077404 Ga0495616_0077404_490_1209 221
289 3300046513 Ga0495616_0113902 Ga0495616_0113902_247_960 221
290 3300046515 Ga0495620_0000163 Ga0495620_0000163_17862_18575 221
291 3300046515 Ga0495620_0001132 Ga0495620_0001132_86_805 221
292 3300046515 Ga0495620_0001236 Ga0495620_0001236_13362_14081 221
293 3300046515 Ga0495620_0036423 Ga0495620_0036423_86_805 221
294 3300046515 Ga0495620_0055123 Ga0495620_0055123_542_1261 221
295 3300046518 Ga0495631_0005591 Ga0495631_0005591_2266_2985 221
296 3300046518 Ga0495631_0031874 Ga0495631_0031874_45_758 221
297 3300046519 Ga0495632_0001420 Ga0495632_0001420_11845_12564 221
298 3300046519 Ga0495632_0003250 Ga0495632_0003250_5472_6191 221
299 3300046519 Ga0495632_0010558 Ga0495632_0010558_4509_5228 221
300 3300046519 Ga0495632_0031082 Ga0495632_0031082_1834_2553 221
301 3300046520 Ga0495637_0000333 Ga0495637_0000333_2017_2736 221
302 3300046520 Ga0495637_0001013 Ga0495637_0001013_14951_15670 221
303 3300046520 Ga0495637_0004590 Ga0495637_0004590_1941_2660 221
304 3300046520 Ga0495637_0008425 Ga0495637_0008425_3139_3858 221
305 3300046520 Ga0495637_0017807 Ga0495637_0017807_2462_3181 221
306 3300046520 Ga0495637_0026678 Ga0495637_0026678_67_780 221
307 3300046520 Ga0495637_0062845 Ga0495637_0062845_71_778 221
308 3300046522 Ga0495643_0003087 Ga0495643_0003087_4900_5610 221
309 3300046522 Ga0495643_0009409 Ga0495643_0009409_1629_2348 221
310 3300046522 Ga0495643_0021260 Ga0495643_0021260_2561_3280 221
311 3300046523 Ga0495644_0002413 Ga0495644_0002413_906_1625 221
312 3300046524 Ga0495648_0001458 Ga0495648_0001458_2270_2989 221
313 3300046524 Ga0495648_0010445 Ga0495648_0010445_2889_3599 221
314 3300046524 Ga0495648_0059626 Ga0495648_0059626_725_1432 221
315 3300046524 Ga0495648_0099154 Ga0495648_0099154_855_1568 221
316 3300046529 Ga0495652_0094264 Ga0495652_0094264_115_822 221
317 3300046530 Ga0495654_0000409 Ga0495654_0000409_5296_6009 221
318 3300046530 Ga0495654_0000778 Ga0495654_0000778_18562_19269 221
319 3300046530 Ga0495654_0003897 Ga0495654_0003897_5360_6067 221
320 3300046530 Ga0495654_0015816 Ga0495654_0015816_611_1330 221
321 3300046530 Ga0495654_0063057 Ga0495654_0063057_234_953 221
322 3300046538 Ga0495609_0000057 Ga0495609_0000057_62631_63344 221
323 3300046538 Ga0495609_0000129 Ga0495609_0000129_21125_21844 221
324 3300046538 Ga0495609_0000374 Ga0495609_0000374_19470_20189 221
325 3300046538 Ga0495609_0012975 Ga0495609_0012975_963_1682 221
326 3300046538 Ga0495609_0051096 Ga0495609_0051096_879_1586 221
327 3300046542 Ga0495597_0000068 Ga0495597_0000068_16077_16790 221
328 3300046542 Ga0495597_0001472 Ga0495597_0001472_778_1491 221
329 3300046542 Ga0495597_0201644 Ga0495597_0201644_11_724 221
330 3300046543 Ga0495645_0406560 Ga0495645_0406560_105_824 221
331 3300046557 Ga0495622_0008516 Ga0495622_0008516_1137_1856 221
332 3300046558 Ga0495633_0000038 Ga0495633_0000038_63813_64526 221
333 3300046616 Ga0495668_0007066 Ga0495668_0007066_2702_3421 221
334 3300046616 Ga0495668_0028694 Ga0495668_0028694_1051_1770 221
335 3300046616 Ga0495668_0034599 Ga0495668_0034599_1603_2316 221
336 3300046648 Ga0495611_0001676 Ga0495611_0001676_9551_10270 221
337 3300046648 Ga0495611_0002091 Ga0495611_0002091_8014_8727 221
338 3300046648 Ga0495611_0002660 Ga0495611_0002660_5877_6596 221
339 3300046660 Ga0495625_0000027 Ga0495625_0000027_174053_174772 221
340 3300046665 Ga0495661_0000079 Ga0495661_0000079_36743_37456 221
341 3300046665 Ga0495661_0000174 Ga0495661_0000174_55198_55917 221
342 3300046665 Ga0495661_0000342 Ga0495661_0000342_6559_7278 221
343 3300046665 Ga0495661_0015442 Ga0495661_0015442_931_1650 221
344 3300046665 Ga0495661_0029729 Ga0495661_0029729_83_802 221
345 3300046691 Ga0495670_0001645 Ga0495670_0001645_5021_5728 221
346 3300046691 Ga0495670_0047538 Ga0495670_0047538_1399_2118 221
347 3300046692 Ga0495671_0003708 Ga0495671_0003708_1090_1803 221
348 3300046692 Ga0495671_0023793 Ga0495671_0023793_44_751 221
349 3300046694 Ga0495649_0021783 Ga0495649_0021783_1946_2656 221
350 3300046694 Ga0495649_0047160 Ga0495649_0047160_34_753 221
351 3300046794 Ga0495589_0001539 Ga0495589_0001539_46_759 221
352 3300046810 Ga0495660_0000761 Ga0495660_0000761_11824_12537 221
353 3300046810 Ga0495660_0003508 Ga0495660_0003508_6945_7664 221
354 3300046810 Ga0495660_0011788 Ga0495660_0011788_81_794 221
355 3300046810 Ga0495660_0276086 Ga0495660_0276086_45_752 221
356 3300047320 Ga0495672_0005914 Ga0495672_0005914_1409_2122 221
357 3300047320 Ga0495672_0008671 Ga0495672_0008671_2348_3067 221
358 3300047320 Ga0495672_0010186 Ga0495672_0010186_4382_5089 221
359 3300047320 Ga0495672_0024546 Ga0495672_0024546_1291_2013 221
360 3300047320 Ga0495672_0048581 Ga0495672_0048581_1203_1922 221
361 3300047321 Ga0495676_0000012 Ga0495676_0000012_169587_170306 221
362 3300047323 Ga0495683_0000032 Ga0495683_0000032_86273_86986 221
363 3300047443 Ga0495687_001410 Ga0495687_001410_5372_6079 221
364 3300047446 Ga0495679_000070 Ga0495679_000070_38049_38768 221
365 3300047446 Ga0495679_000516 Ga0495679_000516_22227_22940 221
366 3300047469 Ga0495673_0000972 Ga0495673_0000972_1454_2167 221
367 3300047469 Ga0495673_0001703 Ga0495673_0001703_13417_14136 221
368 3300047469 Ga0495673_0004243 Ga0495673_0004243_1663_2382 221
369 3300047469 Ga0495673_0004314 Ga0495673_0004314_6574_7293 221
370 3300047469 Ga0495673_0005260 Ga0495673_0005260_4758_5471 221
371 3300047469 Ga0495673_0006040 Ga0495673_0006040_3235_3954 221
372 3300047469 Ga0495673_0011619 Ga0495673_0011619_2883_3602 221
373 3300047469 Ga0495673_0014947 Ga0495673_0014947_190_909 221
374 3300047469 Ga0495673_0015836 Ga0495673_0015836_1603_2310 221
375 3300047469 Ga0495673_0039645 Ga0495673_0039645_1077_1796 221
376 3300047469 Ga0495673_0041961 Ga0495673_0041961_574_1293 221
377 3300047469 Ga0495673_0053637 Ga0495673_0053637_785_1504 221
378 3300047470 Ga0495681_0002106 Ga0495681_0002106_10789_11508 221
379 3300047470 Ga0495681_0017911 Ga0495681_0017911_51_764 221
380 3300047470 Ga0495681_0025580 Ga0495681_0025580_108_815 221
381 3300047470 Ga0495681_0105575 Ga0495681_0105575_46_765 221
382 3300047472 Ga0495686_0160564 Ga0495686_0160564_462_1181 221
383 3300047472 Ga0495686_0257606 Ga0495686_0257606_74_787 221
384 3300048091 Ga0495626_0000109 Ga0495626_0000109_59650_60369 221
385 3300048915 Ga0496112_0119912 Ga0496112_0119912_1640_2347 221
386 3300048915 Ga0496112_0219801 Ga0496112_0219801_958_1677 221
387 3300048916 Ga0496113_0564948 Ga0496113_0564948_64_771 221
388 3300048919 Ga0496116_0000672 Ga0496116_0000672_18704_19411 221
389 3300048919 Ga0496116_0112180 Ga0496116_0112180_18_737 221
390 3300048920 Ga0496117_0002314 Ga0496117_0002314_838_1545 221
391 3300048920 Ga0496117_0169239 Ga0496117_0169239_87_806 221
392 3300048921 Ga0496118_0028046 Ga0496118_0028046_3139_3846 221
393 3300048921 Ga0496118_0134520 Ga0496118_0134520_741_1460 221
394 3300048921 Ga0496118_0173414 Ga0496118_0173414_560_1279 221
395 3300048924 Ga0496121_0001388 Ga0496121_0001388_18623_19330 221
396 3300048924 Ga0496121_0002296 Ga0496121_0002296_1235_1954 221
397 3300048924 Ga0496121_0003076 Ga0496121_0003076_23354_24073 221
398 3300048925 Ga0496122_0000370 Ga0496122_0000370_26543_27262 221
399 3300048925 Ga0496122_0006939 Ga0496122_0006939_700_1407 221
400 3300048925 Ga0496122_0013797 Ga0496122_0013797_5764_6477 221
401 3300048925 Ga0496122_0043287 Ga0496122_0043287_313_1020 221
402 3300048925 Ga0496122_0044652 Ga0496122_0044652_147_866 221
403 3300048925 Ga0496122_0194110 Ga0496122_0194110_141_848 221
404 3300048926 Ga0496123_0000135 Ga0496123_0000135_79780_80499 221
405 3300048926 Ga0496123_0004143 Ga0496123_0004143_11655_12362 221
406 3300048926 Ga0496123_0013166 Ga0496123_0013166_965_1678 221
407 3300048926 Ga0496123_0018971 Ga0496123_0018971_2381_3088 221
408 3300048926 Ga0496123_0096001 Ga0496123_0096001_92_811 221
409 3300048927 Ga0496124_0000407 Ga0496124_0000407_23376_24095 221
410 3300048927 Ga0496124_0013627 Ga0496124_0013627_4233_4952 221
411 3300048927 Ga0496124_0033081 Ga0496124_0033081_2804_3511 221
412 3300048927 Ga0496124_0045239 Ga0496124_0045239_3052_3762 221
413 3300048927 Ga0496124_0139053 Ga0496124_0139053_171_890 221
414 3300048928 Ga0496125_0002716 Ga0496125_0002716_17541_18248 221
415 3300048928 Ga0496125_0016015 Ga0496125_0016015_4720_5427 221
416 3300048928 Ga0496125_0254155 Ga0496125_0254155_174_884 221
417 3300049459 Ga0495678_000046 Ga0495678_000046_105879_106592 221
418 3300049459 Ga0495678_000541 Ga0495678_000541_33733_34452 221
419 3300049459 Ga0495678_002265 Ga0495678_002265_7154_7873 221
420 3300049459 Ga0495678_003529 Ga0495678_003529_6622_7341 221
421 3300049459 Ga0495678_010814 Ga0495678_010814_1755_2462 221
422 3300049460 Ga0495682_0000098 Ga0495682_0000098_64941_65648 221
423 3300049460 Ga0495682_0000463 Ga0495682_0000463_8860_9579 221
424 3300050489 nmdc:mga03683_32788_c1 nmdc:mga03683_32788_c1_695_1402 221
425 3300050491 nmdc:mga00v17_145696_c1 nmdc:mga00v17_145696_c1_224_931 221
426 3300050491 nmdc:mga00v17_73291_c1 nmdc:mga00v17_73291_c1_620_1327 221
427 3300050516 nmdc:mga0sz30_101359_c1 nmdc:mga0sz30_101359_c1_125_832 221
428 3300053140 Ga0500573_0099463 Ga0500573_0099463_74_787 221
429 3300053142 Ga0500577_0100092 Ga0500577_0100092_40_759 221
430 3300053145 Ga0500586_042526 Ga0500586_042526_194_913 221

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00929

RNase_T

Exonuclease

50

209

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ido-assembly1.cif.gz_A structure of the e. coli pol iii epsilon-hot proofreading complex 0.8409 39 190
1j53-assembly1.cif.gz_A structure of the n-terminal exonuclease domain of the epsilon subunit of e.coli dna polymerase iii at ph 8.5 0.8397 41 188
8h2f-assembly1.cif.gz_A crystal structure of dnaq domain in complex witn tmp of streptococcus thermophilus strain dgcc 7710 0.819 38 196
5fku-assembly1.cif.gz_D cryo-em structure of the e. coli replicative dna polymerase complex in dna free state (dna polymerase iii alpha, beta, epsilon, tau complex) 0.7972 41 190
3cm6-assembly1.cif.gz_B crystal structure of cell-death related nuclease 4 (crn-4) bound with er 0.7795 34 192
ID Description Score Start End Superfamily
af_P9WLJ1_34_216_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8883 32 194 3.30.420.10
af_Q2FYH5_2_169_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8471 38 193 3.30.420.10
1j54A00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8468 41 188 3.30.420.10
2p1jB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8415 41 168 3.30.420.10
af_Q682U6_109_294_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8295 40 195 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A3M5BQV8-F1-model_v4 deleted 0.9773 90 199
AF-A0A2D5KRS7-F1-model_v4 deleted 0.9531 14 219
AF-U2BFN5-F1-model_v4 Exonuclease domain-containing protein 0.9476 32 221 GO:0003677
GO:0003887
GO:0005829
GO:0006260
GO:0008408
AF-A0A4P7XKE1-F1-model_v4 3'-5' exonuclease 0.9474 11 221 GO:0003677
GO:0003887
GO:0005829
GO:0006260
GO:0008408
AF-A0A2G6D0D3-F1-model_v4 DNA polymerase III subunit epsilon 0.9436 17 214 GO:0003677
GO:0003887
GO:0005829
GO:0006260
GO:0008408

Feature Viewer

pLDDT pTM Quality
90.1 0.88 High
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Predicted Structure (AlphaFold2)

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