F437071

General Info

Members Datasets Scaffolds Average Seq Length
409 255 290 381

Family's Representative Sequence

Representative Sequence 3300046501|Ga0495607_0062303|Ga0495607_0062303_15_1319
Length 434
Sequence MQRRDGSSANPLRHKVFSLVTDRKPTVKTGLLYALLLSFAAPGIATAQSLSLPQAIEAAFAENPDLAAARWEIGIAEGDKQQAGLMPNPELSWEVEDTRRNTSTTTVMLSQALELGGKRGARVEAASRSQDAAQIELERRGNELRAEVVQAFFTAVRAQTGLELARQSHTLAQRGLEVADGRVRAGKSSPVEVTRAQVQLAETDLLVRRAETLKANSYRDLARTTGSSVSSFDRLEFADLSPGKSPSAARMLTAINQSAELRLAHAQIEQRDAALGSERAQRIPDLTVSIGSQYSREDRERVNVIGLSAPLPLFNRNQGNVLAASRRADQARDLRNAVELRLRTQTQAALDQWATASKEVESFNQVILPSAKSAVDAATRGFEMGKFGFLEVLDAQRTLIAARSQYLESLAIATDARVTVERIYGDISPFTANP

Samples

Sample ID Description Type Environment
1 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
2 2511231006 Pseudomonas sp. GM17 Isolate Nodule
3 2511231007 Pseudomonas sp. GM18 Isolate Nodule
4 2511231010 Pseudomonas sp. GM25 Isolate Nodule
5 2511231011 Pseudomonas sp. GM30 Isolate Nodule
6 2511231016 Pseudomonas sp. GM50 Isolate Nodule
7 2511231023 Pseudomonas sp. GM80 Isolate Nodule
8 2511231024 Pseudomonas sp. GM84 Isolate Nodule
9 2511231031 Pseudomonas sp. GM16 Isolate Nodule
10 2512047018 Pseudomonas chlororaphis chlororaphis GP72 Isolate Rhizosphere
11 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
12 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
13 2582580891 Pseudomonas chlororaphis YL-1 Isolate Unclassified
14 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
15 2597489888 Pseudomonas fluorescens SS101 Isolate Rhizosphere
16 2597489889 Pseudomonas synxantha BG33R Isolate Rhizosphere
17 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
18 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
19 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
20 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
21 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
22 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
23 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
24 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
25 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
26 2599185179 Pseudomonas sp. NFR09 Isolate Rhizoplane
27 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
28 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
29 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
30 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
31 2599185189 Pseudomonas sp. NFPP02 Isolate Rhizoplane
32 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
33 2599185191 Pseudomonas sp. NFPP24 Isolate Rhizoplane
34 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
35 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
36 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
37 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
38 2600255296 Pseudomonas sp. NFR02 Isolate Rhizoplane
39 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
40 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
41 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
42 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
43 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
44 2623620446 Pseudomonas sp. GR 6-02 Isolate Unclassified
45 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
46 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
47 2643221713 Pseudomonas sp. Root9 Isolate Unclassified
48 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
49 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
50 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
51 2721755607 Pseudomonas fluorescens Pt14 Isolate Rhizosphere
52 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
53 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
54 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
55 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
56 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
57 2738543025 Pseudomonas sp. GV091 Isolate Unclassified
58 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
59 2765235841 Pseudomonas putida AA7 Isolate Unclassified
60 2773857673 Pseudomonas sp. 443 Isolate Unclassified
61 2784132063 Pseudomonas sp. 424 Isolate Unclassified
62 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
63 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
64 2808606377 Pseudomonas sp. SJZ083 Isolate Rhizosphere
65 2808606381 Pseudomonas sp. SJZ077 Isolate Rhizosphere
66 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
67 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
68 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
69 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
70 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
71 2834028612 Pseudomonas fluorescens 513 Isolate Unclassified
72 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
73 2842826826 Pseudomonas sp. R-72172 Isolate Unclassified
74 2842837860 Pseudomonas sp. R-72102 Isolate Unclassified
75 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
76 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
77 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
78 2852657418 Pseudomonas sp. JAI115 Isolate Rhizosphere
79 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
80 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
81 2880230671 Pseudomonas fluorescens LBUM677 Isolate Unclassified
82 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
83 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
84 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
85 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
86 2919456309 Pseudomonas sp. 3296 Isolate Rhizosphere
87 2919697872 Pseudomonas frederiksbergensis 4169 Isolate Unclassified
88 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
89 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
90 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
91 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
92 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
93 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
94 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
95 2969304461 Pseudomonas sp. R84 Isolate Rhizosphere
96 2984286254 Pseudomonas chlororaphis aurantiaca JD37 Isolate Rhizosphere
97 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
98 3007718800 Pseudomonas fluorescens BW11P2 Isolate Rhizosphere
99 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
100 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
101 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
102 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
103 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
104 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
105 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
106 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
107 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
108 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
109 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
110 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
111 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
112 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
113 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
114 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
115 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
116 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
117 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
118 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
119 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
120 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
121 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
122 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
123 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
124 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
125 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
126 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
127 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
128 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
129 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
130 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
131 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
132 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
133 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
134 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
135 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
136 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
138 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
139 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
140 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
141 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
142 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
155 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
156 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
157 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
158 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
159 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
160 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
161 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
162 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
163 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
164 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
165 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
166 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
167 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
168 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
169 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
170 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
171 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
172 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
173 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
174 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
175 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
176 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
177 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
178 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
179 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
180 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
181 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
182 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
183 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
184 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
185 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
186 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
187 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
188 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
189 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
190 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
191 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
192 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
193 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
194 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
195 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
196 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
197 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
198 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
199 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
200 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
201 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
202 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
203 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
204 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
205 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
206 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
207 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
208 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
209 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
210 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
211 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
212 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
213 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
214 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
215 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
216 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
217 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
218 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
219 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
220 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
221 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
222 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
223 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
224 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
225 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
226 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
227 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
228 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
229 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
230 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
231 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
232 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
233 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
234 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
235 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
236 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
237 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
238 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
239 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
240 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
241 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
242 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere
243 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
244 8054347763 Pseudomonas carnis NWU Be30 Isolate Unclassified
245 8054503363 Pseudomonas sivasensis BsEB-1 Isolate Unclassified
246 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
247 8055770955 Pseudomonas chlororaphis qlu-1 Isolate Rhizosphere
248 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere
249 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
250 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
251 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
252 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere
253 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere
254 8056569372 Pseudomonas serboccidentalis IT-P374 Isolate Rhizosphere
255 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.9
Metatranscriptomes 0
Isolates 29.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.33
Nodule 3.18
Rhizoplane 8.07
Rhizosphere 62.59
Stem 0
Stem Tuber 0
Unclassified 18.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS2a_Contig_1300 2124908027 Bacteria 11171
2 JGI25162J39368_1000197 3300002737 Bacteria 63232
3 JGI25163J39215_1000326 3300002771 Bacteria 15894
4 JGI25164J39214_1000309 3300002772 Bacteria 32356
5 JGI25165J46597_1000293 3300003214 Bacteria 63232
6 Ga0055536_1000125 3300003781 Bacteria 65908
7 Ga0055536_1000185 3300003781 Bacteria 51529
8 Ga0055536_1019728 3300003781 Bacteria 2109
9 Ga0055530_10000130 3300003791 Bacteria 65904
10 Ga0055530_10016172 3300003791 Bacteria 2396
11 Ga0055540_1000222 3300003792 Bacteria 53630
12 Ga0055540_1000560 3300003792 Bacteria 27426
13 Ga0055531_10000215 3300003794 Bacteria 63490
14 Ga0065704_10010456 3300005289 Bacteria 3751
15 Ga0065712_10010360 3300005290 Bacteria 4518
16 Ga0065712_10068194 3300005290 Bacteria 13223
17 Ga0070670_100000310 3300005331 Bacteria 41815
18 Ga0070661_100000109 3300005344 Bacteria 68441
19 Ga0070665_100038852 3300005548 Bacteria 4785
20 Ga0070664_100000086 3300005564 Bacteria 58796
21 Ga0075432_10003812 3300006058 Bacteria 5137
22 Ga0099823_1000012 3300006944 Bacteria 94911
23 Ga0099823_1000791 3300006944 Bacteria 23427
24 Ga0105251_10008311 3300009011 Bacteria 6266
25 Ga0105251_10041689 3300009011 Bacteria 2233
26 Ga0105244_10000316 3300009036 Bacteria 46529
27 Ga0105244_10000417 3300009036 Bacteria 39564
28 Ga0105244_10002876 3300009036 Bacteria 12744
29 Ga0105244_10006353 3300009036 Bacteria 7676
30 Ga0105244_10008350 3300009036 Bacteria 6474
31 Ga0105244_10010020 3300009036 Bacteria 5773
32 Ga0105244_10013404 3300009036 Bacteria 4795
33 Ga0105244_10018508 3300009036 Bacteria 3906
34 Ga0105244_10019455 3300009036 Bacteria 3789
35 Ga0105250_10000120 3300009092 Bacteria 69464
36 Ga0105250_10001119 3300009092 Bacteria 15115
37 Ga0105250_10001754 3300009092 Bacteria 11420
38 Ga0105250_10012932 3300009092 Bacteria 3434
39 Ga0105250_10015464 3300009092 Bacteria 3123
40 Ga0105243_10000135 3300009148 Bacteria 84432
41 Ga0105243_10000587 3300009148 Bacteria 36543
42 Ga0105243_10021042 3300009148 Bacteria 4950
43 Ga0105243_10036255 3300009148 Bacteria 3827
44 Ga0105242_10000314 3300009176 Bacteria 38796
45 Ga0105237_10000391 3300009545 Bacteria 62410
46 Ga0105249_10032513 3300009553 Bacteria 4720
47 Ga0105246_10000239 3300011119 Bacteria 28228
48 Ga0105246_10002059 3300011119 Bacteria 12113
49 Ga0105246_10005054 3300011119 Bacteria 8020
50 Ga0157373_10003909 3300013100 Bacteria 11251
51 Ga0157373_10006236 3300013100 Bacteria 8911
52 Ga0157373_10008815 3300013100 Bacteria 7472
53 Ga0157371_10003122 3300013102 Bacteria 15314
54 Ga0157369_10009718 3300013105 Bacteria 11001
55 Ga0157369_10009720 3300013105 Bacteria 11000
56 Ga0163162_10003597 3300013306 Bacteria 14840
57 Ga0157375_10002219 3300013308 Bacteria 16809
58 Ga0157375_10004531 3300013308 Bacteria 12072
59 Ga0182008_10000092 3300014497 Bacteria 68381
60 Ga0182008_10026784 3300014497 Bacteria 2923
61 Ga0182006_1002031 3300015261 Bacteria 11356
62 Ga0182007_10001368 3300015262 Bacteria 13125
63 Ga0182005_1013817 3300015265 Bacteria 2268
64 Ga0163161_10009696 3300017792 Bacteria 6666
65 Ga0163161_10072714 3300017792 Bacteria 2518
66 Ga0209760_100108 3300025207 Bacteria 59315
67 Ga0209563_100826 3300025230 Bacteria 9245
68 Ga0207427_100007 3300025231 Bacteria 746220
69 Ga0209437_100006 3300025233 Bacteria 1042724
70 Ga0209233_1000059 3300025261 Bacteria 414562
71 Ga0209676_1000002 3300025292 Bacteria 1732948
72 Ga0209676_1000006 3300025292 Bacteria 1039588
73 Ga0209676_1000500 3300025292 Bacteria 62821
74 Ga0209050_1000242 3300025298 Bacteria 118006
75 Ga0209050_1000317 3300025298 Bacteria 98196
76 Ga0209051_1000001 3300025303 Bacteria 1732974
77 Ga0209051_1000218 3300025303 Bacteria 97013
78 Ga0209257_1000167 3300025304 Bacteria 171342
79 Ga0207696_1000023 3300025711 Bacteria 422195
80 Ga0207696_1000052 3300025711 Bacteria 272880
81 Ga0207696_1000147 3300025711 Bacteria 120603
82 Ga0207696_1002393 3300025711 Bacteria 9234
83 Ga0207696_1002556 3300025711 Bacteria 8856
84 Ga0207655_1000039 3300025728 Bacteria 341249
85 Ga0207655_1000333 3300025728 Bacteria 68997
86 Ga0207655_1000340 3300025728 Bacteria 68045
87 Ga0207655_1000409 3300025728 Bacteria 59139
88 Ga0207655_1004101 3300025728 Bacteria 10480
89 Ga0207655_1004313 3300025728 Bacteria 10160
90 Ga0207655_1005989 3300025728 Bacteria 8136
91 Ga0207655_1008216 3300025728 Bacteria 6657
92 Ga0207655_1009742 3300025728 Bacteria 5925
93 Ga0207713_1001663 3300025735 Bacteria 17230
94 Ga0207713_1002467 3300025735 Bacteria 13449
95 Ga0207713_1002698 3300025735 Bacteria 12677
96 Ga0207713_1024617 3300025735 Bacteria 2802
97 Ga0207713_1033251 3300025735 Bacteria 2255
98 Ga0207671_10000356 3300025914 Bacteria 65770
99 Ga0207649_10000020 3300025920 Bacteria 211018
100 Ga0207650_10000225 3300025925 Bacteria 63430
101 Ga0207686_10000917 3300025934 Bacteria 17660
102 Ga0207709_10000014 3300025935 Bacteria 526302
103 Ga0207709_10000251 3300025935 Bacteria 64622
104 Ga0207679_10000023 3300025945 Bacteria 208356
105 Ga0207712_10017913 3300025961 Bacteria 4608
106 Ga0209389_1000013 3300027296 Bacteria 208890
107 Ga0209389_1000114 3300027296 Bacteria 72204
108 Ga0207428_10019494 3300027907 Bacteria 5781
109 Ga0268256_1009363 3300030500 Bacteria 3262
110 Ga0307511_10078353 3300030521 Bacteria 2345
111 Ga0307408_100000265 3300031548 Bacteria 53136
112 Ga0307405_10000126 3300031731 Bacteria 30203
113 Ga0307405_10000151 3300031731 Bacteria 26435
114 Ga0307412_10000132 3300031911 Bacteria 54263
115 Ga0307412_10022374 3300031911 Bacteria 3874
116 Ga0307416_100227086 3300032002 Bacteria 1796
117 Ga0439447_002414 3300041407 Bacteria 6828
118 Ga0439466_0003164 3300041411 Bacteria 6403
119 Ga0439432_000067 3300042006 Bacteria 32538
120 Ga0439451_000030 3300042009 Bacteria 28884
121 Ga0439452_002302 3300042010 Bacteria 7111
122 Ga0439456_000039 3300042013 Bacteria 48127
123 Ga0439456_000800 3300042013 Bacteria 6383
124 Ga0439463_000073 3300042016 Bacteria 22854
125 Ga0450911_004746 3300042115 Bacteria 2191
126 Ga0450902_000280 3300042137 Bacteria 6130
127 Ga0450905_006914 3300042142 Bacteria 1540
128 Ga0450905_007093 3300042142 Bacteria 1522
129 Ga0439460_0002208 3300042461 Bacteria 4672
130 Ga0450901_001455 3300042533 Bacteria 2696
131 Ga0439440_0000957 3300042993 Bacteria 5072
132 Ga0439440_0003638 3300042993 Bacteria 2988
133 Ga0495617_011305 3300046452 Bacteria 3046
134 Ga0495627_000010 3300046453 Bacteria 381168
135 Ga0495627_000137 3300046453 Bacteria 87495
136 Ga0495627_004564 3300046453 Bacteria 5759
137 Ga0495603_0016844 3300046455 Bacteria 4422
138 Ga0495590_0006773 3300046457 Bacteria 4454
139 Ga0495591_000163 3300046458 Bacteria 71039
140 Ga0495591_001553 3300046458 Bacteria 14008
141 Ga0495591_007858 3300046458 Bacteria 4456
142 Ga0495638_0001429 3300046460 Bacteria 21654
143 Ga0495638_0014481 3300046460 Bacteria 5327
144 Ga0495638_0080789 3300046460 Bacteria 1974
145 Ga0495653_0000110 3300046463 Bacteria 68799
146 Ga0495650_0005492 3300046471 Bacteria 8200
147 Ga0495650_0012445 3300046471 Bacteria 4578
148 Ga0495605_0000001 3300046474 Bacteria 614538
149 Ga0495605_0000324 3300046474 Bacteria 49042
150 Ga0495605_0007156 3300046474 Bacteria 6346
151 Ga0495605_0007188 3300046474 Bacteria 6332
152 Ga0495605_0032257 3300046474 Bacteria 2667
153 Ga0495584_0056521 3300046491 Bacteria 1974
154 Ga0495585_0000283 3300046492 Bacteria 50893
155 Ga0495585_0005150 3300046492 Bacteria 8300
156 Ga0495585_0006867 3300046492 Bacteria 7016
157 Ga0495585_0011854 3300046492 Bacteria 5150
158 Ga0495594_0056643 3300046499 Bacteria 2163
159 Ga0495607_0000094 3300046501 Bacteria 92515
160 Ga0495607_0000391 3300046501 Bacteria 44683
161 Ga0495607_0001397 3300046501 Bacteria 21475
162 Ga0495607_0001852 3300046501 Bacteria 17971
163 Ga0495607_0009143 3300046501 Bacteria 6735
164 Ga0495607_0016645 3300046501 Bacteria 4741
165 Ga0495607_0039552 3300046501 Bacteria 2816
166 Ga0495607_0052176 3300046501 Bacteria 2370
167 Ga0495607_0062303 3300046501 Bacteria 2115
168 Ga0495583_0000611 3300046506 Bacteria 48395
169 Ga0495583_0038630 3300046506 Bacteria 2254
170 Ga0495606_0000421 3300046507 Bacteria 70842
171 Ga0495606_0006865 3300046507 Bacteria 10384
172 Ga0495606_0015567 3300046507 Bacteria 5851
173 Ga0495606_0019528 3300046507 Bacteria 5036
174 Ga0495606_0067745 3300046507 Bacteria 2259
175 Ga0495610_0002650 3300046512 Bacteria 14785
176 Ga0495616_0004858 3300046513 Bacteria 8411
177 Ga0495616_0027772 3300046513 Bacteria 3000
178 Ga0495620_0000004 3300046515 Bacteria 344148
179 Ga0495631_0003453 3300046518 Bacteria 8646
180 Ga0495631_0005013 3300046518 Bacteria 6975
181 Ga0495631_0030903 3300046518 Bacteria 2427
182 Ga0495632_0000234 3300046519 Bacteria 55611
183 Ga0495632_0008701 3300046519 Bacteria 6192
184 Ga0495632_0018143 3300046519 Bacteria 3867
185 Ga0495632_0039913 3300046519 Bacteria 2366
186 Ga0495637_0064791 3300046520 Bacteria 1489
187 Ga0495643_0000568 3300046522 Bacteria 45601
188 Ga0495643_0009935 3300046522 Bacteria 5881
189 Ga0495648_0000214 3300046524 Bacteria 66119
190 Ga0495648_0006976 3300046524 Bacteria 9111
191 Ga0495648_0008665 3300046524 Bacteria 7973
192 Ga0495648_0036764 3300046524 Bacteria 3153
193 Ga0495654_0002584 3300046530 Bacteria 11563
194 Ga0495654_0017034 3300046530 Bacteria 3826
195 Ga0495609_0005369 3300046538 Bacteria 6761
196 Ga0495609_0007641 3300046538 Bacteria 5371
197 Ga0495597_0000008 3300046542 Bacteria 232976
198 Ga0495597_0009529 3300046542 Bacteria 4791
199 Ga0495622_0002852 3300046557 Bacteria 8247
200 Ga0495633_0012748 3300046558 Bacteria 4457
201 Ga0495668_0007011 3300046616 Bacteria 7277
202 Ga0495668_0007713 3300046616 Bacteria 6839
203 Ga0495625_0026892 3300046660 Bacteria 4338
204 Ga0495625_0039444 3300046660 Bacteria 3448
205 Ga0495661_0000013 3300046665 Bacteria 259387
206 Ga0495661_0000503 3300046665 Bacteria 40790
207 Ga0495661_0000977 3300046665 Bacteria 25842
208 Ga0495588_0035080 3300046674 Bacteria 2540
209 Ga0495670_0011297 3300046691 Bacteria 4390
210 Ga0495670_0011715 3300046691 Bacteria 4316
211 Ga0495671_0024305 3300046692 Bacteria 3156
212 Ga0495671_0025225 3300046692 Bacteria 3091
213 Ga0495671_0028791 3300046692 Bacteria 2858
214 Ga0495671_0029152 3300046692 Bacteria 2836
215 Ga0495649_0001249 3300046694 Bacteria 19572
216 Ga0495649_0015304 3300046694 Bacteria 4367
217 Ga0495589_0000318 3300046794 Bacteria 38201
218 Ga0495660_0000142 3300046810 Bacteria 77290
219 Ga0495660_0001037 3300046810 Bacteria 20156
220 Ga0495660_0004614 3300046810 Bacteria 8311
221 Ga0495660_0012310 3300046810 Bacteria 4963
222 Ga0495660_0024615 3300046810 Bacteria 3428
223 Ga0495672_0004835 3300047320 Bacteria 10855
224 Ga0495672_0007367 3300047320 Bacteria 8288
225 Ga0495672_0011316 3300047320 Bacteria 6305
226 Ga0495676_0003671 3300047321 Bacteria 13926
227 Ga0495683_0005772 3300047323 Bacteria 6819
228 Ga0495679_012334 3300047446 Bacteria 3257
229 Ga0495679_013938 3300047446 Bacteria 2997
230 Ga0495673_0006518 3300047469 Bacteria 6849
231 Ga0495673_0007100 3300047469 Bacteria 6489
232 Ga0495673_0028564 3300047469 Bacteria 2640
233 Ga0495681_0000329 3300047470 Bacteria 37635
234 Ga0495681_0005528 3300047470 Bacteria 8443
235 Ga0495681_0023485 3300047470 Bacteria 3274
236 Ga0495626_0022508 3300048091 Bacteria 3110
237 Ga0496100_0198029 3300048903 Bacteria 1462
238 Ga0496110_0071167 3300048913 Bacteria 3083
239 Ga0496114_0012205 3300048917 Bacteria 6874
240 Ga0496114_0082455 3300048917 Bacteria 2718
241 Ga0496116_0000318 3300048919 Bacteria 79091
242 Ga0496116_0011989 3300048919 Bacteria 7117
243 Ga0496117_0000981 3300048920 Bacteria 43680
244 Ga0496117_0001398 3300048920 Bacteria 35030
245 Ga0496117_0008297 3300048920 Bacteria 9884
246 Ga0496117_0018731 3300048920 Bacteria 5718
247 Ga0496117_0047169 3300048920 Bacteria 3092
248 Ga0496117_0047651 3300048920 Bacteria 3071
249 Ga0496117_0074476 3300048920 Bacteria 2260
250 Ga0496118_0004455 3300048921 Bacteria 16602
251 Ga0496118_0020802 3300048921 Bacteria 5806
252 Ga0496118_0050108 3300048921 Bacteria 3208
253 Ga0496121_0000463 3300048924 Bacteria 79640
254 Ga0496121_0026911 3300048924 Bacteria 5398
255 Ga0496121_0028501 3300048924 Bacteria 5195
256 Ga0496121_0063123 3300048924 Bacteria 3029
257 Ga0496121_0121360 3300048924 Bacteria 1973
258 Ga0496122_0000550 3300048925 Bacteria 77621
259 Ga0496122_0012229 3300048925 Bacteria 8582
260 Ga0496122_0037216 3300048925 Bacteria 3921
261 Ga0496123_0001595 3300048926 Bacteria 30827
262 Ga0496123_0002822 3300048926 Bacteria 20585
263 Ga0496123_0018539 3300048926 Bacteria 5530
264 Ga0496123_0028756 3300048926 Bacteria 4108
265 Ga0496123_0029837 3300048926 Bacteria 4004
266 Ga0496123_0082982 3300048926 Bacteria 1940
267 Ga0496124_0000448 3300048927 Bacteria 72432
268 Ga0496124_0006381 3300048927 Bacteria 12861
269 Ga0496124_0029852 3300048927 Bacteria 4850
270 Ga0496124_0055848 3300048927 Bacteria 3334
271 Ga0496124_0069099 3300048927 Bacteria 2934
272 Ga0496124_0208688 3300048927 Bacteria 1479
273 Ga0496125_0000853 3300048928 Bacteria 48937
274 Ga0496125_0001178 3300048928 Bacteria 39572
275 Ga0496125_0001658 3300048928 Bacteria 31322
276 Ga0496125_0071022 3300048928 Bacteria 2722
277 Ga0496125_0106238 3300048928 Bacteria 2050
278 Ga0496126_0025102 3300048929 Bacteria 5741
279 Ga0495678_002022 3300049459 Bacteria 14541
280 Ga0495678_012169 3300049459 Bacteria 4086
281 Ga0495678_020252 3300049459 Bacteria 2950
282 Ga0495682_0001091 3300049460 Bacteria 15846
283 Ga0495682_0002608 3300049460 Bacteria 8457
284 Ga0501034_0000045 3300049571 Bacteria 226186
285 Ga0501034_0244939 3300049571 Bacteria 1738
286 Ga0500659_0000105 3300053135 Bacteria 44063
287 Ga0500573_0021507 3300053140 Bacteria 3698
288 Ga0500577_0039030 3300053142 Bacteria 1719
289 Ga0500586_084815 3300053145 Bacteria 1112
290 Ga0500634_0004705 3300053161 Bacteria 6366

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053145 Ga0500586_084815 Ga0500586_084815_26_1090 289
2 3300047470 Ga0495681_0023485 Ga0495681_0023485_1662_2906 301
3 3300009176 Ga0105242_10000314 Ga0105242_1000031414 309
4 3300011119 Ga0105246_10002059 Ga0105246_100020593 309
5 3300013100 Ga0157373_10006236 Ga0157373_100062363 309
6 3300046507 Ga0495606_0019528 Ga0495606_0019528_1167_2390 311
7 3300046453 Ga0495627_000137 Ga0495627_000137_43127_44329 314
8 3300046518 Ga0495631_0005013 Ga0495631_0005013_4397_5599 314
9 3300046519 Ga0495632_0039913 Ga0495632_0039913_110_1312 314
10 3300047320 Ga0495672_0011316 Ga0495672_0011316_389_1591 314
11 3300048903 Ga0496100_0198029 Ga0496100_0198029_307_1437 314
12 3300046530 Ga0495654_0002584 Ga0495654_0002584_264_1472 315
13 3300053142 Ga0500577_0039030 Ga0500577_0039030_553_1704 315
14 3300048928 Ga0496125_0001658 Ga0496125_0001658_12559_13788 317
15 3300046471 Ga0495650_0012445 Ga0495650_0012445_1266_2468 321
16 3300046519 Ga0495632_0018143 Ga0495632_0018143_342_1544 321
17 3300005344 Ga0070661_100000109 Ga0070661_10000010922 323
18 3300005564 Ga0070664_100000086 Ga0070664_10000008615 323
19 3300017792 Ga0163161_10072714 Ga0163161_100727142 323
20 3300025920 Ga0207649_10000020 Ga0207649_1000002022 323
21 3300025934 Ga0207686_10000917 Ga0207686_1000091711 323
22 3300025945 Ga0207679_10000023 Ga0207679_1000002322 323
23 3300048917 Ga0496114_0012205 Ga0496114_0012205_3324_4577 323
24 3300048928 Ga0496125_0071022 Ga0496125_0071022_404_1627 323
25 3300048913 Ga0496110_0071167 Ga0496110_0071167_153_1406 325
26 3300048927 Ga0496124_0000448 Ga0496124_0000448_20446_21699 325
27 3300046522 Ga0495643_0009935 Ga0495643_0009935_143_1432 326
28 3300013105 Ga0157369_10009718 Ga0157369_100097185 328
29 3300025728 Ga0207655_1000409 Ga0207655_100040933 328
30 3300046692 Ga0495671_0028791 Ga0495671_0028791_1629_2837 332
31 3300047321 Ga0495676_0003671 Ga0495676_0003671_5688_6896 332
32 3300048927 Ga0496124_0055848 Ga0496124_0055848_1951_3210 332
33 3300009545 Ga0105237_10000391 Ga0105237_1000039121 333
34 3300025914 Ga0207671_10000356 Ga0207671_1000035622 333
35 3300013308 Ga0157375_10002219 Ga0157375_100022199 334
36 3300049571 Ga0501034_0244939 Ga0501034_0244939_154_1311 334
37 3300009092 Ga0105250_10012932 Ga0105250_100129323 335
38 3300030521 Ga0307511_10078353 Ga0307511_100783532 335
39 3300046474 Ga0495605_0000001 Ga0495605_0000001_260057_261283 335
40 iso_pu_bacteria 2908446538 2908447302 336
41 3300046501 Ga0495607_0000391 Ga0495607_0000391_31928_33130 337
42 3300046506 Ga0495583_0000611 Ga0495583_0000611_5620_6846 337
43 3300046518 Ga0495631_0030903 Ga0495631_0030903_666_1886 337
44 3300047446 Ga0495679_012334 Ga0495679_012334_915_2135 337
45 3300048929 Ga0496126_0025102 Ga0496126_0025102_1150_2373 337
46 3300046453 Ga0495627_004564 Ga0495627_004564_2303_3547 338
47 3300046458 Ga0495591_001553 Ga0495591_001553_1550_2794 338
48 3300046501 Ga0495607_0016645 Ga0495607_0016645_213_1457 338
49 3300046519 Ga0495632_0008701 Ga0495632_0008701_3984_5228 338
50 3300046665 Ga0495661_0000977 Ga0495661_0000977_13271_14515 338
51 3300009036 Ga0105244_10000417 Ga0105244_1000041724 339
52 3300025728 Ga0207655_1005989 Ga0207655_10059896 339
53 3300048917 Ga0496114_0082455 Ga0496114_0082455_1292_2551 339
54 3300048920 Ga0496117_0018731 Ga0496117_0018731_142_1401 339
55 3300048921 Ga0496118_0020802 Ga0496118_0020802_165_1424 339
56 3300048925 Ga0496122_0000550 Ga0496122_0000550_41673_42932 339
57 3300048926 Ga0496123_0001595 Ga0496123_0001595_6380_7639 339
58 iso_pu_bacteria 8056137416 8056140622 339
59 3300009148 Ga0105243_10021042 Ga0105243_100210421 340
60 3300011119 Ga0105246_10005054 Ga0105246_100050546 340
61 3300025711 Ga0207696_1002393 Ga0207696_10023936 340
62 iso_pu_bacteria 2806310737 2807407845 340
63 iso_pu_bacteria 2806310745 2807456148 340
64 iso_pu_bacteria 3007872151 3007876130 340
65 3300031548 Ga0307408_100000265 Ga0307408_10000026515 341
66 3300031731 Ga0307405_10000126 Ga0307405_1000012611 341
67 3300031911 Ga0307412_10000132 Ga0307412_1000013235 341
68 3300032002 Ga0307416_100227086 Ga0307416_1002270862 341
69 3300042137 Ga0450902_000280 Ga0450902_000280_2363_3580 341
70 3300042142 Ga0450905_007093 Ga0450905_007093_39_1256 341
71 3300042533 Ga0450901_001455 Ga0450901_001455_1168_2385 341
72 3300047470 Ga0495681_0000329 Ga0495681_0000329_13846_15054 341
73 3300048927 Ga0496124_0029852 Ga0496124_0029852_2879_4087 341
74 3300003792 Ga0055540_1000560 Ga0055540_100056022 342
75 3300009092 Ga0105250_10000120 Ga0105250_1000012017 342
76 3300025711 Ga0207696_1000052 Ga0207696_100005219 342
77 3300031731 Ga0307405_10000151 Ga0307405_1000015113 342
78 3300046530 Ga0495654_0017034 Ga0495654_0017034_795_1997 343
79 iso_pu_bacteria 2826581358 2826586829 343
80 iso_pu_bacteria 8056120720 8056123953 343
81 3300009036 Ga0105244_10010020 Ga0105244_100100203 344
82 3300009148 Ga0105243_10000587 Ga0105243_1000058720 344
83 3300011119 Ga0105246_10000239 Ga0105246_100002398 344
84 3300013100 Ga0157373_10003909 Ga0157373_100039092 344
85 3300015262 Ga0182007_10001368 Ga0182007_1000136811 344
86 3300025728 Ga0207655_1000333 Ga0207655_100033341 344
87 3300025935 Ga0207709_10000014 Ga0207709_10000014388 344
88 3300042115 Ga0450911_004746 Ga0450911_004746_466_1686 344
89 3300046492 Ga0495585_0000283 Ga0495585_0000283_34691_35914 344
90 3300046665 Ga0495661_0000013 Ga0495661_0000013_196523_197746 344
91 3300048920 Ga0496117_0047651 Ga0496117_0047651_1142_2362 344
92 3300048921 Ga0496118_0050108 Ga0496118_0050108_834_2054 344
93 3300048927 Ga0496124_0006381 Ga0496124_0006381_9419_10621 344
94 iso_pu_bacteria 8056115690 8056118665 344
95 3300003781 Ga0055536_1019728 Ga0055536_10197281 345
96 3300006944 Ga0099823_1000012 Ga0099823_100001240 345
97 3300009011 Ga0105251_10041689 Ga0105251_100416892 345
98 3300025292 Ga0209676_1000500 Ga0209676_100050027 345
99 3300027296 Ga0209389_1000013 Ga0209389_100001386 345
100 3300042013 Ga0439456_000039 Ga0439456_000039_7310_8518 345
101 3300046458 Ga0495591_000163 Ga0495591_000163_54414_55616 345
102 3300046520 Ga0495637_0064791 Ga0495637_0064791_266_1468 345
103 3300046542 Ga0495597_0000008 Ga0495597_0000008_15595_16797 345
104 3300046810 Ga0495660_0001037 Ga0495660_0001037_7044_8246 345
105 iso_pu_bacteria 2919697872 2919699657 345
106 3300005548 Ga0070665_100038852 Ga0070665_1000388523 346
107 3300046460 Ga0495638_0001429 Ga0495638_0001429_3853_5100 346
108 3300046524 Ga0495648_0006976 Ga0495648_0006976_2368_3615 346
109 3300046538 Ga0495609_0007641 Ga0495609_0007641_1511_2758 346
110 3300046542 Ga0495597_0009529 Ga0495597_0009529_792_2060 346
111 3300046694 Ga0495649_0001249 Ga0495649_0001249_14197_15465 346
112 3300048926 Ga0496123_0018539 Ga0496123_0018539_1589_2842 346
113 3300049459 Ga0495678_002022 Ga0495678_002022_8837_10084 346
114 3300049459 Ga0495678_012169 Ga0495678_012169_480_1727 346
115 3300049571 Ga0501034_0000045 Ga0501034_0000045_99854_101131 346
116 3300053135 Ga0500659_0000105 Ga0500659_0000105_32535_33812 346
117 iso_pu_bacteria 2919456309 2919461334 346
118 3300046458 Ga0495591_007858 Ga0495591_007858_170_1417 347
119 3300046501 Ga0495607_0000094 Ga0495607_0000094_75209_76420 347
120 3300046501 Ga0495607_0009143 Ga0495607_0009143_3850_5097 347
121 3300046515 Ga0495620_0000004 Ga0495620_0000004_177505_178740 347
122 3300046519 Ga0495632_0000234 Ga0495632_0000234_22120_23355 347
123 3300046522 Ga0495643_0000568 Ga0495643_0000568_13782_15017 347
124 3300046524 Ga0495648_0000214 Ga0495648_0000214_25915_27150 347
125 3300046692 Ga0495671_0024305 Ga0495671_0024305_204_1472 347
126 3300046810 Ga0495660_0012310 Ga0495660_0012310_2858_4078 347
127 3300046810 Ga0495660_0024615 Ga0495660_0024615_521_1768 347
128 iso_pu_bacteria 2511231006 2511268154 347
129 iso_pu_bacteria 2512047018 2512324532 347
130 iso_pu_bacteria 2582580891 2583794647 347
131 iso_pu_bacteria 2597489887 2597860204 347
132 iso_pu_bacteria 2599185185 2599483047 347
133 iso_pu_bacteria 2599185257 2599803233 347
134 iso_pu_bacteria 2671180172 2671771194 347
135 iso_pu_bacteria 2740892503 2743739747 347
136 3300002737 JGI25162J39368_1000197 JGI25162J39368_100019724 348
137 3300002771 JGI25163J39215_1000326 JGI25163J39215_100032610 348
138 3300002772 JGI25164J39214_1000309 JGI25164J39214_10003093 348
139 3300003214 JGI25165J46597_1000293 JGI25165J46597_100029339 348
140 3300005290 Ga0065712_10068194 Ga0065712_100681944 348
141 3300006944 Ga0099823_1000791 Ga0099823_100079112 348
142 3300009036 Ga0105244_10000316 Ga0105244_100003165 348
143 3300009148 Ga0105243_10000135 Ga0105243_1000013556 348
144 3300009553 Ga0105249_10032513 Ga0105249_100325131 348
145 3300013102 Ga0157371_10003122 Ga0157371_1000312211 348
146 3300013308 Ga0157375_10004531 Ga0157375_100045319 348
147 3300014497 Ga0182008_10000092 Ga0182008_1000009248 348
148 3300025207 Ga0209760_100108 Ga0209760_10010820 348
149 3300025231 Ga0207427_100007 Ga0207427_100007705 348
150 3300025233 Ga0209437_100006 Ga0209437_100006971 348
151 3300025261 Ga0209233_1000059 Ga0209233_100005924 348
152 3300025728 Ga0207655_1000340 Ga0207655_10003405 348
153 3300025728 Ga0207655_1009742 Ga0207655_10097423 348
154 3300025935 Ga0207709_10000251 Ga0207709_1000025147 348
155 3300025961 Ga0207712_10017913 Ga0207712_100179135 348
156 3300027296 Ga0209389_1000114 Ga0209389_100011429 348
157 3300030500 Ga0268256_1009363 Ga0268256_10093633 348
158 3300046492 Ga0495585_0011854 Ga0495585_0011854_647_1894 348
159 3300048091 Ga0495626_0022508 Ga0495626_0022508_1395_2642 348
160 3300048919 Ga0496116_0000318 Ga0496116_0000318_24020_25270 348
161 3300048920 Ga0496117_0000981 Ga0496117_0000981_16330_17580 348
162 3300048924 Ga0496121_0000463 Ga0496121_0000463_54388_55638 348
163 3300048924 Ga0496121_0028501 Ga0496121_0028501_1509_2762 348
164 3300048925 Ga0496122_0012229 Ga0496122_0012229_2660_3910 348
165 3300048926 Ga0496123_0002822 Ga0496123_0002822_1830_3080 348
166 3300048928 Ga0496125_0001178 Ga0496125_0001178_37698_38918 348
167 3300048928 Ga0496125_0106238 Ga0496125_0106238_493_1743 348
168 iso_pu_bacteria 2599185155 2599331224 348
169 3300006058 Ga0075432_10003812 Ga0075432_100038124 349
170 3300009036 Ga0105244_10006353 Ga0105244_100063535 349
171 3300013100 Ga0157373_10008815 Ga0157373_100088155 349
172 3300025728 Ga0207655_1004313 Ga0207655_10043136 349
173 3300027907 Ga0207428_10019494 Ga0207428_100194943 349
174 3300046474 Ga0495605_0032257 Ga0495605_0032257_1122_2435 349
175 3300046507 Ga0495606_0015567 Ga0495606_0015567_1311_2558 349
176 3300046665 Ga0495661_0000503 Ga0495661_0000503_661_1881 349
177 3300046694 Ga0495649_0015304 Ga0495649_0015304_3097_4344 349
178 3300046794 Ga0495589_0000318 Ga0495589_0000318_33322_34569 349
179 3300047469 Ga0495673_0028564 Ga0495673_0028564_31_1278 349
180 3300049460 Ga0495682_0001091 Ga0495682_0001091_4251_5519 349
181 3300053161 Ga0500634_0004705 Ga0500634_0004705_4477_5697 349
182 iso_pu_bacteria 2554235231 2555248315 349
183 3300009036 Ga0105244_10018508 Ga0105244_100185082 350
184 3300013306 Ga0163162_10003597 Ga0163162_100035974 350
185 3300025728 Ga0207655_1000039 Ga0207655_100003937 350
186 3300046463 Ga0495653_0000110 Ga0495653_0000110_56274_57521 350
187 3300046507 Ga0495606_0000421 Ga0495606_0000421_56637_57884 350
188 3300046507 Ga0495606_0067745 Ga0495606_0067745_565_1785 350
189 3300046518 Ga0495631_0003453 Ga0495631_0003453_4480_5727 350
190 3300048925 Ga0496122_0037216 Ga0496122_0037216_1651_2871 350
191 3300048926 Ga0496123_0029837 Ga0496123_0029837_1667_2914 350
192 3300048927 Ga0496124_0069099 Ga0496124_0069099_1579_2832 350
193 iso_pu_bacteria 2511231024 2511374457 350
194 iso_pu_bacteria 2765235841 2765584675 350
195 iso_pu_bacteria 3007803356 3007808158 350
196 iso_pu_bacteria 8054929484 8054931861 350
197 iso_pu_bacteria 8056148874 8056150833 350
198 3300005289 Ga0065704_10010456 Ga0065704_100104563 351
199 3300005331 Ga0070670_100000310 Ga0070670_1000003102 351
200 3300009011 Ga0105251_10008311 Ga0105251_100083113 351
201 3300025711 Ga0207696_1000023 Ga0207696_1000023202 351
202 3300025735 Ga0207713_1002467 Ga0207713_10024679 351
203 3300025735 Ga0207713_1024617 Ga0207713_10246172 351
204 3300025735 Ga0207713_1033251 Ga0207713_10332512 351
205 3300025925 Ga0207650_10000225 Ga0207650_1000022538 351
206 3300031911 Ga0307412_10022374 Ga0307412_100223742 351
207 3300042142 Ga0450905_006914 Ga0450905_006914_279_1514 351
208 3300048920 Ga0496117_0001398 Ga0496117_0001398_2501_3736 351
209 3300048921 Ga0496118_0004455 Ga0496118_0004455_15330_16565 351
210 3300048924 Ga0496121_0026911 Ga0496121_0026911_1118_2365 351
211 3300048924 Ga0496121_0063123 Ga0496121_0063123_1045_2265 351
212 3300048928 Ga0496125_0000853 Ga0496125_0000853_27422_28657 351
213 3300049459 Ga0495678_020252 Ga0495678_020252_491_1738 351
214 iso_pu_bacteria 2599185179 2599449448 351
215 iso_pu_bacteria 2599185190 2599510814 351
216 iso_pu_bacteria 2599185191 2599519696 351
217 iso_pu_bacteria 2599185290 2599890188 351
218 iso_pu_bacteria 2599185303 2599950326 351
219 iso_pu_bacteria 2643221571 2643869272 351
220 iso_pu_bacteria 2738541294 2738808716 351
221 iso_pu_bacteria 2738541309 2738896076 351
222 iso_pu_bacteria 2834028612 2834028630 351
223 iso_pu_bacteria 2852612431 2852616001 351
224 iso_pu_bacteria 2852667396 2852670969 351
225 iso_pu_bacteria 2912963787 2912967953 351
226 iso_pu_bacteria 2931390751 2931391649 351
227 iso_pu_bacteria 2939651529 2939652382 351
228 iso_pu_bacteria 2946006987 2946012222 351
229 iso_pu_bacteria 2947233263 2947235444 351
230 iso_pu_bacteria 8054503363 8054504237 351
231 3300009148 Ga0105243_10036255 Ga0105243_100362551 352
232 3300014497 Ga0182008_10026784 Ga0182008_100267843 352
233 3300046453 Ga0495627_000010 Ga0495627_000010_344899_346125 352
234 3300046457 Ga0495590_0006773 Ga0495590_0006773_2510_3757 352
235 3300046460 Ga0495638_0080789 Ga0495638_0080789_624_1871 352
236 3300046471 Ga0495650_0005492 Ga0495650_0005492_4360_5607 352
237 3300046474 Ga0495605_0000324 Ga0495605_0000324_37417_38643 352
238 3300046501 Ga0495607_0001852 Ga0495607_0001852_12163_13410 352
239 3300046513 Ga0495616_0004858 Ga0495616_0004858_2718_3965 352
240 3300046660 Ga0495625_0039444 Ga0495625_0039444_661_1872 352
241 3300047470 Ga0495681_0005528 Ga0495681_0005528_4470_5717 352
242 3300048920 Ga0496117_0008297 Ga0496117_0008297_2712_3947 352
243 3300053140 Ga0500573_0021507 Ga0500573_0021507_229_1455 352
244 iso_pu_bacteria 2597489888 2597861930 352
245 iso_pu_bacteria 2597489889 2597867662 352
246 iso_pu_bacteria 2599185189 2599507860 352
247 iso_pu_bacteria 2600255296 2601690543 352
248 iso_pu_bacteria 2619619299 2621301944 352
249 iso_pu_bacteria 2643221713 2644622303 352
250 iso_pu_bacteria 2721755607 2723246824 352
251 iso_pu_bacteria 2738541265 2738672370 352
252 iso_pu_bacteria 2738541282 2738750763 352
253 iso_pu_bacteria 2738541303 2738859804 352
254 iso_pu_bacteria 2816332298 2817488660 352
255 iso_pu_bacteria 2842826826 2842830706 352
256 iso_pu_bacteria 2842837860 2842838724 352
257 iso_pu_bacteria 8054285046 8054289249 352
258 iso_pu_bacteria 8054347763 8054348797 352
259 iso_pu_bacteria 8055817908 8055818669 352
260 3300009036 Ga0105244_10002876 Ga0105244_100028764 353
261 3300025728 Ga0207655_1008216 Ga0207655_10082163 353
262 3300048926 Ga0496123_0082982 Ga0496123_0082982_690_1925 353
263 3300042009 Ga0439451_000030 Ga0439451_000030_9458_10708 355
264 3300048924 Ga0496121_0121360 Ga0496121_0121360_320_1540 355
265 3300048926 Ga0496123_0028756 Ga0496123_0028756_1011_2231 355
266 3300003781 Ga0055536_1000125 Ga0055536_100012549 356
267 3300003781 Ga0055536_1000185 Ga0055536_10001859 356
268 3300003791 Ga0055530_10000130 Ga0055530_1000013022 356
269 3300003791 Ga0055530_10016172 Ga0055530_100161722 356
270 3300003792 Ga0055540_1000222 Ga0055540_100022210 356
271 3300003794 Ga0055531_10000215 Ga0055531_1000021534 356
272 3300009036 Ga0105244_10013404 Ga0105244_100134044 356
273 3300009092 Ga0105250_10001119 Ga0105250_100011194 356
274 3300009092 Ga0105250_10015464 Ga0105250_100154642 356
275 3300015265 Ga0182005_1013817 Ga0182005_10138172 356
276 3300025230 Ga0209563_100826 Ga0209563_1008268 356
277 3300025292 Ga0209676_1000002 Ga0209676_1000002314 356
278 3300025292 Ga0209676_1000006 Ga0209676_1000006980 356
279 3300025298 Ga0209050_1000242 Ga0209050_100024284 356
280 3300025298 Ga0209050_1000317 Ga0209050_100031723 356
281 3300025303 Ga0209051_1000001 Ga0209051_1000001314 356
282 3300025303 Ga0209051_1000218 Ga0209051_100021875 356
283 3300025304 Ga0209257_1000167 Ga0209257_1000167142 356
284 3300025711 Ga0207696_1000147 Ga0207696_100014786 356
285 3300025711 Ga0207696_1002556 Ga0207696_10025563 356
286 3300025735 Ga0207713_1001663 Ga0207713_100166311 356
287 3300042016 Ga0439463_000073 Ga0439463_000073_16636_17901 356
288 3300042993 Ga0439440_0003638 Ga0439440_0003638_1012_2277 356
289 3300046474 Ga0495605_0007188 Ga0495605_0007188_3253_4491 356
290 3300046501 Ga0495607_0001397 Ga0495607_0001397_11549_12787 356
291 3300046616 Ga0495668_0007011 Ga0495668_0007011_5618_6856 356
292 3300046810 Ga0495660_0000142 Ga0495660_0000142_55900_57138 356
293 3300009036 Ga0105244_10019455 Ga0105244_100194553 357
294 3300025728 Ga0207655_1004101 Ga0207655_10041016 357
295 3300048919 Ga0496116_0011989 Ga0496116_0011989_4568_5815 357
296 3300048920 Ga0496117_0047169 Ga0496117_0047169_1105_2352 357
297 iso_pu_bacteria 2554235341 2555672136 357
298 iso_pu_bacteria 2599185160 2599353697 357
299 iso_pu_bacteria 2599185161 2599360609 357
300 iso_pu_bacteria 2599185162 2599366931 357
301 iso_pu_bacteria 2599185163 2599373720 357
302 iso_pu_bacteria 2599185164 2599378805 357
303 iso_pu_bacteria 2599185165 2599386217 357
304 iso_pu_bacteria 2599185166 2599392579 357
305 iso_pu_bacteria 2599185168 2599404345 357
306 iso_pu_bacteria 2599185181 2599460531 357
307 iso_pu_bacteria 2599185182 2599470093 357
308 iso_pu_bacteria 2599185186 2599489552 357
309 iso_pu_bacteria 2599185356 2600213143 357
310 iso_pu_bacteria 2600255313 2601773311 357
311 iso_pu_bacteria 2667528171 2671096292 357
312 iso_pu_bacteria 2811994881 2812369809 357
313 iso_pu_bacteria 2818991464 2819701384 357
314 iso_pu_bacteria 2844665904 2844666304 357
315 iso_pu_bacteria 2917070673 2917076012 357
316 iso_pu_bacteria 2923519811 2923523895 357
317 iso_pu_bacteria 2935353572 2935356983 357
318 iso_pu_bacteria 3007419365 3007423843 357
319 iso_pu_bacteria 637000220 637322555 357
320 iso_pu_bacteria 8019769354 8019773767 357
321 iso_pu_bacteria 8057798959 8057805018 357
322 3300046460 Ga0495638_0014481 Ga0495638_0014481_1353_2633 358
323 3300046507 Ga0495606_0006865 Ga0495606_0006865_4495_5742 358
324 3300046512 Ga0495610_0002650 Ga0495610_0002650_8521_9789 358
325 3300046616 Ga0495668_0007713 Ga0495668_0007713_1382_2650 358
326 3300047446 Ga0495679_013938 Ga0495679_013938_1551_2798 358
327 3300048920 Ga0496117_0074476 Ga0496117_0074476_535_1794 358
328 3300048927 Ga0496124_0208688 Ga0496124_0208688_94_1341 358
329 3300013105 Ga0157369_10009720 Ga0157369_100097205 359
330 iso_pu_bacteria 2842815866 2842819324 359
331 iso_pu_bacteria 2842849001 2842852304 359
332 3300041407 Ga0439447_002414 Ga0439447_002414_2642_3934 360
333 3300041411 Ga0439466_0003164 Ga0439466_0003164_2183_3475 360
334 3300042010 Ga0439452_002302 Ga0439452_002302_3364_4656 360
335 3300042013 Ga0439456_000800 Ga0439456_000800_2929_4221 360
336 3300042461 Ga0439460_0002208 Ga0439460_0002208_2232_3524 360
337 3300042993 Ga0439440_0000957 Ga0439440_0000957_1248_2540 360
338 3300046558 Ga0495633_0012748 Ga0495633_0012748_1116_2372 360
339 3300047320 Ga0495672_0004835 Ga0495672_0004835_5453_6709 360
340 iso_pu_bacteria 2511231010 2511288206 360
341 iso_pu_bacteria 2511231011 2511298170 360
342 iso_pu_bacteria 2511231023 2511370202 360
343 iso_pu_bacteria 2511231031 2511416390 360
344 iso_pu_bacteria 2600255318 2601797238 360
345 iso_pu_bacteria 2603880185 2606076031 360
346 iso_pu_bacteria 2603880199 2606130680 360
347 iso_pu_bacteria 2643221713 2644623666 360
348 iso_pu_bacteria 2643221713 2644624624 360
349 iso_pu_bacteria 2713897149 2715756032 360
350 iso_pu_bacteria 2738543025 2739313695 360
351 iso_pu_bacteria 2773857673 2774135100 360
352 iso_pu_bacteria 2784132063 2784265169 360
353 iso_pu_bacteria 2808606377 2808931726 360
354 iso_pu_bacteria 2808606381 2808953846 360
355 iso_pu_bacteria 2818991456 2819657711 360
356 iso_pu_bacteria 2852657418 2852659391 360
357 iso_pu_bacteria 2878029506 2878033488 360
358 iso_pu_bacteria 2880230671 2880232791 360
359 iso_pu_bacteria 2904518522 2904520471 360
360 iso_pu_bacteria 2969304461 2969308251 360
361 iso_pu_bacteria 3007718800 3007719689 360
362 iso_pu_bacteria 3007803356 3007807088 360
363 iso_pu_bacteria 8056569372 8056573586 360
364 iso_pu_bacteria 2923153595 2923158835 361
365 iso_pu_bacteria 2984286254 2984287339 361
366 iso_pu_bacteria 8015687852 8015692920 361
367 iso_pu_bacteria 8055770955 8055776167 361
368 3300046492 Ga0495585_0006867 Ga0495585_0006867_1396_2643 362
369 3300046501 Ga0495607_0039552 Ga0495607_0039552_1373_2629 362
370 3300042006 Ga0439432_000067 Ga0439432_000067_15825_17111 363
371 3300046455 Ga0495603_0016844 Ga0495603_0016844_1959_3239 363
372 3300046501 Ga0495607_0062303 Ga0495607_0062303_15_1319 363
373 3300046691 Ga0495670_0011297 Ga0495670_0011297_946_2226 363
374 3300046692 Ga0495671_0029152 Ga0495671_0029152_413_1693 363
375 iso_pu_bacteria 2511231007 2511273831 364
376 iso_pu_bacteria 2511231016 2511329017 364
377 iso_pu_bacteria 2623620446 2624493069 364
378 iso_pu_bacteria 8019775933 8019776072 364
379 3300046491 Ga0495584_0056521 Ga0495584_0056521_252_1523 365
380 3300046524 Ga0495648_0036764 Ga0495648_0036764_86_1357 365
381 3300046660 Ga0495625_0026892 Ga0495625_0026892_1842_3113 365
382 3300047323 Ga0495683_0005772 Ga0495683_0005772_2354_3625 365
383 3300047469 Ga0495673_0006518 Ga0495673_0006518_2384_3655 365
384 iso_pu_bacteria 2643221602 2644022052 365
385 3300015261 Ga0182006_1002031 Ga0182006_10020317 366
386 iso_pu_bacteria 8056172158 8056173649 368
387 2124908027 MRS2a_Contig_1300 MRS2a_00200620 372
388 3300005290 Ga0065712_10010360 Ga0065712_100103603 372
389 3300009036 Ga0105244_10008350 Ga0105244_100083502 372
390 3300009092 Ga0105250_10001754 Ga0105250_100017548 372
391 3300017792 Ga0163161_10009696 Ga0163161_100096962 372
392 3300025735 Ga0207713_1002698 Ga0207713_10026981 372
393 3300046452 Ga0495617_011305 Ga0495617_011305_815_2086 372
394 3300046474 Ga0495605_0007156 Ga0495605_0007156_4559_5830 372
395 3300046492 Ga0495585_0005150 Ga0495585_0005150_4735_6006 372
396 3300046499 Ga0495594_0056643 Ga0495594_0056643_506_1777 372
397 3300046501 Ga0495607_0052176 Ga0495607_0052176_519_1790 372
398 3300046506 Ga0495583_0038630 Ga0495583_0038630_354_1625 372
399 3300046513 Ga0495616_0027772 Ga0495616_0027772_776_2047 372
400 3300046524 Ga0495648_0008665 Ga0495648_0008665_2292_3563 372
401 3300046538 Ga0495609_0005369 Ga0495609_0005369_2285_3556 372
402 3300046557 Ga0495622_0002852 Ga0495622_0002852_2426_3697 372
403 3300046674 Ga0495588_0035080 Ga0495588_0035080_842_2113 372
404 3300046691 Ga0495670_0011715 Ga0495670_0011715_2366_3637 372
405 3300046692 Ga0495671_0025225 Ga0495671_0025225_749_2020 372
406 3300046810 Ga0495660_0004614 Ga0495660_0004614_4762_6033 372
407 3300047320 Ga0495672_0007367 Ga0495672_0007367_2353_3624 372
408 3300047469 Ga0495673_0007100 Ga0495673_0007100_723_1994 372
409 3300049460 Ga0495682_0002608 Ga0495682_0002608_4705_5976 372

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

52

226

0.95

PF02321

OEP

Outer membrane efflux protein

250

425

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ng5-assembly1.cif.gz_B multi-drug efflux; membrane transport; rnd superfamily; drug resistance 0.8751 285 360
2f1m-assembly2.cif.gz_D conformational flexibility in the multidrug efflux system protein acra 0.8607 283 361
5azs-assembly1.cif.gz_C crystal structure of a membrane protein from pseudomonas aeruginosa 0.7562 40 359
7ng9-assembly1.cif.gz_A trimeric efflux pump klebsiella tolc 0.7476 40 359
4k7r-assembly1.cif.gz_A crystal structures of cusc review conformational changes accompanying folding and transmembrane channel formation 0.7398 30 362
ID Description Score Start End Superfamily
2f1mD03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9187 285 356 1.10.287.470
2f1mA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9115 285 356 1.10.287.470
2f1mB03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8769 285 356 1.10.287.470
2f1mD03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8731 285 356 1.10.287.470
2f1mA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8666 285 356 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A356HBC9-F1-model_v4 deleted 0.9172 38 140
AF-A0A4Y6CHE9-F1-model_v4 deleted 0.8946 41 364
AF-A0A7W1SEM7-F1-model_v4 TolC family protein 0.8888 30 359 GO:0015562
AF-A0A356HBC9-F1-model_v4 deleted 0.8847 38 140
AF-I3ZDX6-F1-model_v4 Outer membrane protein 0.8795 36 362 GO:0015562

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pLDDT pTM Quality
81.64 0.69 Medium
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Predicted Structure (AlphaFold2)

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