F417746

General Info

Members Datasets Scaffolds Average Seq Length
348 215 696 339

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2990088156|2990089038
Length 384
Sequence LFIALYAALGAAAVGLAGLIALRALRRRSVAVSLAVLTAVAVGSMLAGTLSVAWAMLLNKHDLGVVTTVCAMAAVTATVTALLLARWVIGGHRALEQAARALGDAGDAAAVDTEFGDAPPGVRSVGYVEPATPMPAELASLSRQLADSSARLVASRERERALEASRRELVAWISHDLRSPLAGLRAMAEALEDGIALDPARYHRQIRGEVERLSGMVGDLFELSRIQAGSLTLAPTRMSVYDLVSDAIAGADALATERGVLLADDGVEQVPVEVDGKEMTRVLANLLVNAIHRTPADGTVAVGARQVADGVVLSVTDGCGGIPADDLPRVFDTGWRGTNARTPPGGAGLGLAIVRGIVEAHRGRAAVRNVPGGCRFEVTLPGAH

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
8 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
9 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
10 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
11 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
12 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
13 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
17 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
18 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
19 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
20 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
21 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
22 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
23 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
24 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
25 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
26 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
27 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
28 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
29 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
30 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
31 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
32 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
33 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
34 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
35 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
36 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
37 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
38 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
39 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
40 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
41 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
42 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
43 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
44 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
45 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
46 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
47 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
48 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
49 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
50 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
51 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
52 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
53 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
54 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
55 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
58 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
59 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
60 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
61 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
65 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
66 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
67 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
68 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
69 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
72 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
78 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
79 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
83 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
86 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
87 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
88 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
89 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
90 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
93 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
99 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
100 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
103 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
104 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
107 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
137 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
138 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
139 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
140 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
141 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
142 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
143 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
144 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
145 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
148 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
151 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
152 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
153 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
154 2643221548 Streptomyces sp. Root55 Isolate Unclassified
155 2643221578 Streptomyces sp. Root63 Isolate Unclassified
156 2643221647 Streptomyces sp. Root369 Isolate Unclassified
157 2643221670 Streptomyces sp. Root431 Isolate Unclassified
158 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
159 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
160 2643221714 Streptomyces sp. Root264 Isolate Unclassified
161 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
162 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
163 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
164 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
165 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
166 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
167 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
168 2808606448 Streptomyces sp. 193411 Isolate Unclassified
169 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
170 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
171 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
172 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
173 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
174 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
175 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
176 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
177 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
178 2867369537 Streptomyces sp. Z26 Isolate Unclassified
179 2867428634 Streptomyces sp. RP5T Isolate Unclassified
180 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
181 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
182 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
183 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
184 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
185 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
186 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
187 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
188 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
189 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
190 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
191 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
192 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
193 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
194 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
195 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
196 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
197 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
198 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
199 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
200 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
201 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
202 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
203 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
204 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
205 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
206 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
207 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
208 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
209 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
210 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
211 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
212 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
213 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
214 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
215 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.46
Metatranscriptomes 0.29
Isolates 19.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.03
Nodule 0.57
Rhizoplane 0.86
Rhizosphere 74.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10045478 3300001989 Bacteria 1440
2 rootH1_10026061 3300003316 Bacteria 1428
3 Ga0006562J51391_1120876 3300003578 Bacteria 1178
4 Ga0068856_100206352 3300005614 Bacteria 1980
5 Ga0075363_100012632 3300006048 Bacteria 4073
6 Ga0075367_10002689 3300006178 Bacteria 8195
7 Ga0105246_10147380 3300011119 Bacteria 1778
8 Ga0182008_10005292 3300014497 Bacteria 7375
9 Ga0182007_10003821 3300015262 Bacteria 7014
10 Ga0183367_1008 3300015688 Bacteria 490626
11 Ga0209758_1004894 3300025297 Bacteria 10772
12 Ga0207426_1019233 3300025302 Bacteria 2390
13 Ga0207661_10169618 3300025944 Bacteria 1899
14 Ga0207639_10029134 3300026041 Bacteria 4039
15 Ga0209371_1023338 3300027312 Bacteria 1458
16 Ga0307517_10012106 3300028786 Bacteria 11888
17 Ga0307517_10044338 3300028786 Bacteria 4707
18 Ga0307515_10003309 3300028794 Bacteria 34051
19 Ga0307511_10000642 3300030521 Bacteria 37399
20 Ga0307511_10018050 3300030521 Bacteria 6751
21 Ga0307511_10027997 3300030521 Bacteria 5131
22 Ga0307511_10102953 3300030521 Bacteria 1863
23 Ga0307512_10003845 3300030522 Bacteria 16903
24 Ga0307512_10134730 3300030522 Bacteria 1535
25 Ga0307509_10004590 3300031507 Bacteria 19802
26 Ga0307509_10006406 3300031507 Bacteria 15854
27 Ga0307509_10012664 3300031507 Bacteria 10064
28 Ga0307509_10292677 3300031507 Bacteria 1382
29 Ga0307508_10016341 3300031616 Bacteria 6756
30 Ga0307508_10027569 3300031616 Bacteria 5139
31 Ga0307508_10032885 3300031616 Bacteria 4683
32 Ga0307508_10068063 3300031616 Bacteria 3130
33 Ga0307514_10008802 3300031649 Bacteria 8543
34 Ga0307516_10001464 3300031730 Bacteria 32613
35 Ga0307516_10001659 3300031730 Bacteria 30624
36 Ga0307516_10036965 3300031730 Bacteria 4884
37 Ga0307518_10011847 3300031838 Bacteria 6235
38 Ga0307416_100415391 3300032002 Bacteria 1388
39 Ga0307507_10009143 3300033179 Bacteria 13325
40 Ga0307507_10016822 3300033179 Bacteria 8466
41 Ga0307507_10193350 3300033179 Bacteria 1425
42 Ga0307510_10005060 3300033180 Bacteria 15635
43 Ga0307510_10025535 3300033180 Bacteria 6810
44 Ga0307510_10032319 3300033180 Bacteria 5897
45 Ga0307510_10075173 3300033180 Bacteria 3332
46 Ga0395898_0002103 3300037466 Bacteria 24678
47 Ga0395898_0002281 3300037466 Bacteria 23136
48 Ga0439436_0001253 3300041404 Bacteria 7241
49 Ga0439436_0002726 3300041404 Bacteria 5336
50 Ga0439439_0002842 3300041406 Bacteria 3742
51 Ga0451853_2122892 3300041512 Bacteria 4521
52 Ga0439433_0002455 3300041999 Bacteria 3933
53 Ga0439442_013566 3300042002 Bacteria 1672
54 Ga0439449_0001728 3300042007 Bacteria 8585
55 Ga0439457_000177 3300042014 Bacteria 16667
56 Ga0439457_001396 3300042014 Bacteria 7271
57 Ga0450903_000185 3300042138 Bacteria 13851
58 Ga0439458_0000421 3300042157 Bacteria 10668
59 Ga0466972_0001634 3300044658 Bacteria 10969
60 Ga0466972_0022433 3300044658 Bacteria 3145
61 Ga0466966_0008402 3300044684 Bacteria 6831
62 Ga0466963_0024478 3300044694 Bacteria 3844
63 Ga0466970_0032173 3300044765 Bacteria 2771
64 Ga0466959_0075923 3300045049 Bacteria 2427
65 Ga0466967_0335968 3300045976 Bacteria 1460
66 Ga0495617_035485 3300046452 Bacteria 1674
67 Ga0495627_021023 3300046453 Bacteria 2167
68 Ga0495627_021445 3300046453 Bacteria 2142
69 Ga0495592_0003586 3300046454 Bacteria 11157
70 Ga0495603_0001102 3300046455 Bacteria 15668
71 Ga0495603_0004002 3300046455 Bacteria 8773
72 Ga0495603_0007964 3300046455 Bacteria 6394
73 Ga0495603_0014183 3300046455 Bacteria 4821
74 Ga0495603_0074261 3300046455 Bacteria 1997
75 Ga0495629_0000574 3300046459 Bacteria 29816
76 Ga0495629_0001018 3300046459 Bacteria 22505
77 Ga0495629_0006108 3300046459 Bacteria 8952
78 Ga0495629_0046605 3300046459 Bacteria 3041
79 Ga0495629_0054953 3300046459 Bacteria 2784
80 Ga0495629_0083009 3300046459 Bacteria 2236
81 Ga0495629_0179855 3300046459 Bacteria 1466
82 Ga0495638_0014498 3300046460 Bacteria 5323
83 Ga0495638_0071827 3300046460 Bacteria 2116
84 Ga0495651_0006493 3300046462 Bacteria 8938
85 Ga0495651_0060499 3300046462 Bacteria 2900
86 Ga0495582_0006999 3300046473 Bacteria 6272
87 Ga0495582_0066743 3300046473 Bacteria 1988
88 Ga0495605_0038498 3300046474 Bacteria 2399
89 Ga0495605_0081922 3300046474 Bacteria 1508
90 Ga0495662_0000741 3300046476 Bacteria 15638
91 Ga0495662_0010982 3300046476 Bacteria 4428
92 Ga0495664_0005355 3300046477 Bacteria 7040
93 Ga0495585_0005422 3300046492 Bacteria 8046
94 Ga0495585_0025612 3300046492 Bacteria 3377
95 Ga0495594_0000187 3300046499 Bacteria 30127
96 Ga0495594_0009729 3300046499 Bacteria 4974
97 Ga0495594_0035195 3300046499 Bacteria 2727
98 Ga0495594_0099596 3300046499 Bacteria 1634
99 Ga0495594_0114809 3300046499 Bacteria 1520
100 Ga0495596_0068951 3300046500 Bacteria 1374
101 Ga0495606_0094694 3300046507 Bacteria 1830
102 Ga0495616_0006053 3300046513 Bacteria 7371
103 Ga0495616_0079864 3300046513 Bacteria 1567
104 Ga0495618_0073044 3300046514 Bacteria 2183
105 Ga0495620_0012435 3300046515 Bacteria 4396
106 Ga0495620_0026137 3300046515 Bacteria 2748
107 Ga0495628_0008814 3300046516 Bacteria 8633
108 Ga0495628_0026570 3300046516 Bacteria 4717
109 Ga0495630_0008722 3300046517 Bacteria 7284
110 Ga0495632_0021313 3300046519 Bacteria 3494
111 Ga0495643_0009870 3300046522 Bacteria 5902
112 Ga0495643_0010243 3300046522 Bacteria 5774
113 Ga0495648_0093356 3300046524 Bacteria 1678
114 Ga0495666_0082459 3300046526 Bacteria 1520
115 Ga0495652_0049812 3300046529 Bacteria 3584
116 Ga0495652_0392538 3300046529 Bacteria 984
117 Ga0495640_0003623 3300046533 Bacteria 12402
118 Ga0495587_0021230 3300046536 Bacteria 4004
119 Ga0495609_0028365 3300046538 Bacteria 2554
120 Ga0495597_0012343 3300046542 Bacteria 4122
121 Ga0495645_0158210 3300046543 Bacteria 1568
122 Ga0495622_0005875 3300046557 Bacteria 5698
123 Ga0495622_0007180 3300046557 Bacteria 5176
124 Ga0495622_0024809 3300046557 Bacteria 2800
125 Ga0495622_0038992 3300046557 Bacteria 2212
126 Ga0495667_0073497 3300046559 Bacteria 2227
127 Ga0495667_0137782 3300046559 Bacteria 1573
128 Ga0495634_0001751 3300046642 Bacteria 18798
129 Ga0495611_0017932 3300046648 Bacteria 3032
130 Ga0495625_0087227 3300046660 Bacteria 2163
131 Ga0495635_0003670 3300046663 Bacteria 10641
132 Ga0495635_0016149 3300046663 Bacteria 5212
133 Ga0495588_0004586 3300046674 Bacteria 6104
134 Ga0495588_0006666 3300046674 Bacteria 5215
135 Ga0495588_0018827 3300046674 Bacteria 3373
136 Ga0495588_0029822 3300046674 Bacteria 2738
137 Ga0495657_0002231 3300046675 Bacteria 16400
138 Ga0495657_0007714 3300046675 Bacteria 8282
139 Ga0495657_0057651 3300046675 Bacteria 2581
140 Ga0495623_0091419 3300046679 Bacteria 1867
141 Ga0495646_0002474 3300046680 Bacteria 11358
142 Ga0495646_0125016 3300046680 Bacteria 1452
143 Ga0495613_0000486 3300046689 Bacteria 33719
144 Ga0495613_0009789 3300046689 Bacteria 7126
145 Ga0495613_0010884 3300046689 Bacteria 6751
146 Ga0495613_0014023 3300046689 Bacteria 5949
147 Ga0495613_0018726 3300046689 Bacteria 5163
148 Ga0495613_0019981 3300046689 Bacteria 4991
149 Ga0495670_0020429 3300046691 Bacteria 3266
150 Ga0495671_0001964 3300046692 Bacteria 13206
151 Ga0495649_0041440 3300046694 Bacteria 2518
152 Ga0495589_0014861 3300046794 Bacteria 4005
153 Ga0495589_0021108 3300046794 Bacteria 3328
154 Ga0495589_0045068 3300046794 Bacteria 2191
155 Ga0495589_0045859 3300046794 Bacteria 2170
156 Ga0495600_0003564 3300046809 Bacteria 9159
157 Ga0495660_0071811 3300046810 Bacteria 1834
158 Ga0495604_0004292 3300047317 Bacteria 11286
159 Ga0495604_0030648 3300047317 Bacteria 4270
160 Ga0495604_0054039 3300047317 Bacteria 3100
161 Ga0495604_0063821 3300047317 Bacteria 2808
162 Ga0495636_0037599 3300047318 Bacteria 1999
163 Ga0495676_0000578 3300047321 Bacteria 30172
164 Ga0495676_0001429 3300047321 Bacteria 20581
165 Ga0495676_0001903 3300047321 Bacteria 18327
166 Ga0495676_0012951 3300047321 Bacteria 7503
167 Ga0495676_0021664 3300047321 Bacteria 5606
168 Ga0495680_0003561 3300047322 Bacteria 15255
169 Ga0495683_0015236 3300047323 Bacteria 4003
170 Ga0495687_001089 3300047443 Bacteria 26664
171 Ga0495687_001703 3300047443 Bacteria 19545
172 Ga0495687_004794 3300047443 Bacteria 8917
173 Ga0495675_0005325 3300047444 Bacteria 7840
174 Ga0495675_0014524 3300047444 Bacteria 4978
175 Ga0495679_015538 3300047446 Bacteria 2781
176 Ga0495685_000757 3300047447 Bacteria 9875
177 Ga0495685_001815 3300047447 Bacteria 6586
178 Ga0495685_027945 3300047447 Bacteria 1940
179 Ga0495681_0001518 3300047470 Bacteria 17336
180 Ga0495681_0008653 3300047470 Bacteria 6354
181 Ga0495686_0054074 3300047472 Bacteria 2515
182 Ga0495593_0003501 3300047673 Bacteria 9393
183 Ga0495614_0000254 3300048089 Bacteria 20846
184 Ga0495614_0001637 3300048089 Bacteria 9763
185 Ga0495626_0066984 3300048091 Bacteria 1622
186 Ga0496108_0178194 3300048911 Bacteria 1840
187 Ga0496109_0007197 3300048912 Bacteria 9403
188 Ga0495682_0034332 3300049460 Bacteria 1871
189 Ga0501031_0013424 3300049568 Bacteria 5342
190 Ga0501031_0243975 3300049568 Bacteria 1167
191 Ga0501032_0007276 3300049569 Bacteria 8098
192 Ga0501032_0010358 3300049569 Bacteria 6721
193 Ga0501032_0021254 3300049569 Bacteria 4512
194 Ga0501032_0048311 3300049569 Bacteria 2873
195 Ga0501033_0006631 3300049570 Bacteria 9053
196 Ga0501033_0035584 3300049570 Bacteria 3733
197 Ga0501033_0053636 3300049570 Bacteria 2985
198 Ga0501033_0060869 3300049570 Bacteria 2784
199 Ga0501033_0089649 3300049570 Bacteria 2249
200 Ga0501034_0003459 3300049571 Bacteria 17984
201 Ga0501034_0016519 3300049571 Bacteria 7570
202 Ga0501034_0027451 3300049571 Bacteria 5791
203 Ga0501034_0033362 3300049571 Bacteria 5224
204 Ga0501034_0183639 3300049571 Bacteria 2055
205 Ga0501034_0190849 3300049571 Bacteria 2011
206 Ga0501036_0003054 3300049572 Bacteria 13342
207 Ga0501036_0018666 3300049572 Bacteria 5815
208 Ga0501036_0024436 3300049572 Bacteria 5093
209 Ga0501036_0169003 3300049572 Bacteria 1842
210 Ga0501036_0271636 3300049572 Bacteria 1419
211 Ga0501037_0030850 3300049573 Bacteria 3959
212 Ga0501037_0033660 3300049573 Bacteria 3784
213 Ga0501037_0049714 3300049573 Bacteria 3070
214 Ga0501037_0120592 3300049573 Bacteria 1886
215 Ga0501038_0012742 3300049574 Bacteria 7680
216 Ga0501038_0015014 3300049574 Bacteria 7054
217 Ga0501038_0033899 3300049574 Bacteria 4492
218 Ga0501038_0073880 3300049574 Bacteria 2886
219 Ga0501038_0143108 3300049574 Bacteria 1954
220 Ga0501039_0008990 3300049575 Bacteria 7608
221 Ga0501041_0029341 3300049577 Bacteria 3318
222 Ga0501043_0006863 3300049579 Bacteria 9089
223 Ga0501043_0009012 3300049579 Bacteria 7852
224 Ga0501043_0009822 3300049579 Bacteria 7502
225 Ga0501043_0017026 3300049579 Bacteria 5698
226 Ga0501043_0059801 3300049579 Bacteria 2990
227 Ga0501046_0015795 3300049580 Bacteria 6334
228 Ga0501047_0006104 3300049581 Bacteria 11324
229 Ga0501047_0006934 3300049581 Bacteria 10641
230 Ga0501047_0008481 3300049581 Bacteria 9697
231 Ga0501047_0029250 3300049581 Bacteria 5314
232 Ga0501047_0067501 3300049581 Bacteria 3446
233 Ga0501047_0250888 3300049581 Bacteria 1618
234 Ga0501047_0344714 3300049581 Bacteria 1327
235 Ga0501048_0002527 3300049582 Bacteria 13984
236 Ga0501048_0068737 3300049582 Bacteria 2502
237 Ga0501068_0006739 3300049584 Bacteria 6346
238 Ga0501068_0090512 3300049584 Bacteria 1887
239 Ga0501070_0000906 3300049586 Bacteria 27001
240 Ga0501070_0109645 3300049586 Bacteria 2281
241 Ga0501070_0227343 3300049586 Bacteria 1529
242 Ga0501071_0000589 3300049587 Bacteria 18773
243 Ga0501072_0004241 3300049588 Bacteria 10869
244 Ga0501074_0001378 3300049590 Bacteria 16123
245 Ga0501076_0034025 3300049592 Bacteria 3980
246 Ga0501077_0037029 3300049593 Bacteria 3108
247 Ga0501079_0067528 3300049741 Bacteria 2759
248 Ga0501083_0015545 3300049744 Bacteria 5328
249 Ga0501035_0003531 3300049822 Bacteria 14945
250 Ga0501035_0010108 3300049822 Bacteria 8759
251 Ga0501035_0021742 3300049822 Bacteria 5898
252 Ga0501035_0094577 3300049822 Bacteria 2627
253 Ga0501035_0119997 3300049822 Bacteria 2299
254 Ga0501035_0149213 3300049822 Bacteria 2029
255 Ga0501035_0374009 3300049822 Bacteria 1189
256 Ga0501044_0004859 3300049823 Bacteria 15026
257 Ga0501044_0019214 3300049823 Bacteria 7315
258 Ga0501044_0022220 3300049823 Bacteria 6761
259 Ga0501044_0045006 3300049823 Bacteria 4576
260 Ga0501044_0059309 3300049823 Bacteria 3921
261 Ga0501044_0125049 3300049823 Bacteria 2569
262 Ga0501044_0138562 3300049823 Bacteria 2422
263 nmdc:mga03n38_9254_c1 3300050490 Bacteria 3573
264 nmdc:mga06z11_10959_c1 3300050494 Bacteria 3888
265 nmdc:mga07m45_23285_c1 3300050496 Bacteria 3384
266 Ga0495619_0050821 3300053085 Bacteria 2738
267 Ga0500578_0005328 3300053086 Bacteria 8773
268 Ga0500644_0010899 3300053088 Bacteria 2470
269 Ga0500566_0055372 3300053094 Bacteria 2259
270 Ga0500560_003289 3300053107 Bacteria 3246
271 Ga0500569_003680 3300053109 Bacteria 3163
272 Ga0500621_082302 3300053126 Bacteria 1289
273 Ga0500658_0003952 3300053134 Bacteria 5565
274 Ga0500561_0004152 3300053137 Bacteria 2592
275 Ga0500573_0051902 3300053140 Bacteria 2358
276 Ga0500573_0092595 3300053140 Bacteria 1706
277 Ga0500600_0024416 3300053149 Bacteria 3602
278 Ga0500616_0023018 3300053153 Bacteria 3474
279 Ga0500634_0047309 3300053161 Bacteria 2322
280 Ga0500587_003072 3300053739 Bacteria 2364
281 Ga0501082_0031610 3300060353 Bacteria 4565
282 2990089038 2990088156 Bacteria 6657676
283 2547409947 2547132111 Bacteria 8013147
284 2585307285 2582581313 Bacteria 10042643
285 2585312716 2582581314 Bacteria 11452267
286 2643760618 2643221548 Bacteria 8053412
287 2643898772 2643221578 Bacteria 9213798
288 2644264821 2643221647 Bacteria 10741251
289 2644386222 2643221670 Bacteria 6497041
290 2644409524 2643221673 Bacteria 9196637
291 2644441114 2643221678 Bacteria 9540101
292 2644627239 2643221714 Bacteria 9015452
293 2784589189 2784132148 Bacteria 8627943
294 2785339536 2784746763 Bacteria 9783172
295 2785372466 2784746768 Bacteria 10036182
296 2786673359 2786546132 Bacteria 10419719
297 2793984142 2791355406 Bacteria 11364898
298 2808846618 2808606359 Bacteria 9866990
299 2808848808 2808606359 Bacteria 9866990
300 2808914275 2808606375 Bacteria 9466072
301 2809232798 2808606448 Bacteria 8656184
302 2811843739 2808606982 Bacteria 7791042
303 2812355069 2811994879 Bacteria 9313447
304 2812477962 2811994917 Bacteria 7761064
305 2852638598 2852635781 Bacteria 8251373
306 2862286313 2862281513 Bacteria 9621493
307 2862292781 2862290372 Bacteria 7471434
308 2862386058 2862382967 Bacteria 10317375
309 2862508253 2862507626 Bacteria 9425308
310 2863411111 2863404153 Bacteria 9672205
311 2867375077 2867369537 Bacteria 6501581
312 2867431020 2867428634 Bacteria 9590268
313 2877678197 2877676314 Bacteria 9512378
314 2912716884 2912715099 Bacteria 9460473
315 2912727041 2912723979 Bacteria 8557534
316 2912761542 2912757875 Bacteria 7940295
317 2918508446 2918501144 Bacteria 8668083
318 2935393046 2935390628 Bacteria 7043367
319 2946052778 2946045630 Bacteria 8527308
320 2946070832 2946064051 Bacteria 8957905
321 2946079767 2946072368 Bacteria 8999607
322 2947228406 2947224130 Bacteria 9938529
323 2954003346 2954002825 Bacteria 9173742
324 2954383319 2954380949 Bacteria 10050426
325 2954679661 2954673503 Bacteria 9685905
326 2954684494 2954682443 Bacteria 9862841
327 2954713635 2954711539 Bacteria 10867210
328 2954723601 2954721474 Bacteria 10456478
329 2954738232 2954731030 Bacteria 10243860
330 2954742504 2954740390 Bacteria 10229294
331 2954757093 2954749733 Bacteria 10366972
332 2954761468 2954759201 Bacteria 9358192
333 2990046567 2990044586 Bacteria 6603797
334 2990060330 2990059506 Bacteria 9321252
335 2997602095 2997600082 Bacteria 9896405
336 3006322673 3006321560 Bacteria 8247479
337 3006427130 3006425503 Bacteria 6491253
338 3006495009 3006493962 Bacteria 8825450
339 8008565297 8008558824 Bacteria 10610750
340 8008575643 8008574985 Bacteria 7815457
341 8023626250 8023623736 Bacteria 8593882
342 8025536142 8025530807 Bacteria 8495698
343 8047895516 8047893842 Bacteria 11723082
344 8048128456 8048127548 Bacteria 11053136
345 8048363438 8048356638 Bacteria 11044339
346 8048372541 8048369669 Bacteria 11666822
347 8048381475 8048379754 Bacteria 11877923
348 8056668839 8056667051 Bacteria 6953971
349 JGI24739J22299_10045478
350 rootH1_10026061
351 Ga0006562J51391_1120876
352 Ga0068856_100206352
353 Ga0075363_100012632
354 Ga0075367_10002689
355 Ga0105246_10147380
356 Ga0182008_10005292
357 Ga0182007_10003821
358 Ga0183367_1008
359 Ga0209758_1004894
360 Ga0207426_1019233
361 Ga0207661_10169618
362 Ga0207639_10029134
363 Ga0209371_1023338
364 Ga0307517_10012106
365 Ga0307517_10044338
366 Ga0307515_10003309
367 Ga0307511_10000642
368 Ga0307511_10018050
369 Ga0307511_10027997
370 Ga0307511_10102953
371 Ga0307512_10003845
372 Ga0307512_10134730
373 Ga0307509_10004590
374 Ga0307509_10006406
375 Ga0307509_10012664
376 Ga0307509_10292677
377 Ga0307508_10016341
378 Ga0307508_10027569
379 Ga0307508_10032885
380 Ga0307508_10068063
381 Ga0307514_10008802
382 Ga0307516_10001464
383 Ga0307516_10001659
384 Ga0307516_10036965
385 Ga0307518_10011847
386 Ga0307416_100415391
387 Ga0307507_10009143
388 Ga0307507_10016822
389 Ga0307507_10193350
390 Ga0307510_10005060
391 Ga0307510_10025535
392 Ga0307510_10032319
393 Ga0307510_10075173
394 Ga0395898_0002103
395 Ga0395898_0002281
396 Ga0439436_0001253
397 Ga0439436_0002726
398 Ga0439439_0002842
399 Ga0451853_2122892
400 Ga0439433_0002455
401 Ga0439442_013566
402 Ga0439449_0001728
403 Ga0439457_000177
404 Ga0439457_001396
405 Ga0450903_000185
406 Ga0439458_0000421
407 Ga0466972_0001634
408 Ga0466972_0022433
409 Ga0466966_0008402
410 Ga0466963_0024478
411 Ga0466970_0032173
412 Ga0466959_0075923
413 Ga0466967_0335968
414 Ga0495617_035485
415 Ga0495627_021023
416 Ga0495627_021445
417 Ga0495592_0003586
418 Ga0495603_0001102
419 Ga0495603_0004002
420 Ga0495603_0007964
421 Ga0495603_0014183
422 Ga0495603_0074261
423 Ga0495629_0000574
424 Ga0495629_0001018
425 Ga0495629_0006108
426 Ga0495629_0046605
427 Ga0495629_0054953
428 Ga0495629_0083009
429 Ga0495629_0179855
430 Ga0495638_0014498
431 Ga0495638_0071827
432 Ga0495651_0006493
433 Ga0495651_0060499
434 Ga0495582_0006999
435 Ga0495582_0066743
436 Ga0495605_0038498
437 Ga0495605_0081922
438 Ga0495662_0000741
439 Ga0495662_0010982
440 Ga0495664_0005355
441 Ga0495585_0005422
442 Ga0495585_0025612
443 Ga0495594_0000187
444 Ga0495594_0009729
445 Ga0495594_0035195
446 Ga0495594_0099596
447 Ga0495594_0114809
448 Ga0495596_0068951
449 Ga0495606_0094694
450 Ga0495616_0006053
451 Ga0495616_0079864
452 Ga0495618_0073044
453 Ga0495620_0012435
454 Ga0495620_0026137
455 Ga0495628_0008814
456 Ga0495628_0026570
457 Ga0495630_0008722
458 Ga0495632_0021313
459 Ga0495643_0009870
460 Ga0495643_0010243
461 Ga0495648_0093356
462 Ga0495666_0082459
463 Ga0495652_0049812
464 Ga0495652_0392538
465 Ga0495640_0003623
466 Ga0495587_0021230
467 Ga0495609_0028365
468 Ga0495597_0012343
469 Ga0495645_0158210
470 Ga0495622_0005875
471 Ga0495622_0007180
472 Ga0495622_0024809
473 Ga0495622_0038992
474 Ga0495667_0073497
475 Ga0495667_0137782
476 Ga0495634_0001751
477 Ga0495611_0017932
478 Ga0495625_0087227
479 Ga0495635_0003670
480 Ga0495635_0016149
481 Ga0495588_0004586
482 Ga0495588_0006666
483 Ga0495588_0018827
484 Ga0495588_0029822
485 Ga0495657_0002231
486 Ga0495657_0007714
487 Ga0495657_0057651
488 Ga0495623_0091419
489 Ga0495646_0002474
490 Ga0495646_0125016
491 Ga0495613_0000486
492 Ga0495613_0009789
493 Ga0495613_0010884
494 Ga0495613_0014023
495 Ga0495613_0018726
496 Ga0495613_0019981
497 Ga0495670_0020429
498 Ga0495671_0001964
499 Ga0495649_0041440
500 Ga0495589_0014861
501 Ga0495589_0021108
502 Ga0495589_0045068
503 Ga0495589_0045859
504 Ga0495600_0003564
505 Ga0495660_0071811
506 Ga0495604_0004292
507 Ga0495604_0030648
508 Ga0495604_0054039
509 Ga0495604_0063821
510 Ga0495636_0037599
511 Ga0495676_0000578
512 Ga0495676_0001429
513 Ga0495676_0001903
514 Ga0495676_0012951
515 Ga0495676_0021664
516 Ga0495680_0003561
517 Ga0495683_0015236
518 Ga0495687_001089
519 Ga0495687_001703
520 Ga0495687_004794
521 Ga0495675_0005325
522 Ga0495675_0014524
523 Ga0495679_015538
524 Ga0495685_000757
525 Ga0495685_001815
526 Ga0495685_027945
527 Ga0495681_0001518
528 Ga0495681_0008653
529 Ga0495686_0054074
530 Ga0495593_0003501
531 Ga0495614_0000254
532 Ga0495614_0001637
533 Ga0495626_0066984
534 Ga0496108_0178194
535 Ga0496109_0007197
536 Ga0495682_0034332
537 Ga0501031_0013424
538 Ga0501031_0243975
539 Ga0501032_0007276
540 Ga0501032_0010358
541 Ga0501032_0021254
542 Ga0501032_0048311
543 Ga0501033_0006631
544 Ga0501033_0035584
545 Ga0501033_0053636
546 Ga0501033_0060869
547 Ga0501033_0089649
548 Ga0501034_0003459
549 Ga0501034_0016519
550 Ga0501034_0027451
551 Ga0501034_0033362
552 Ga0501034_0183639
553 Ga0501034_0190849
554 Ga0501036_0003054
555 Ga0501036_0018666
556 Ga0501036_0024436
557 Ga0501036_0169003
558 Ga0501036_0271636
559 Ga0501037_0030850
560 Ga0501037_0033660
561 Ga0501037_0049714
562 Ga0501037_0120592
563 Ga0501038_0012742
564 Ga0501038_0015014
565 Ga0501038_0033899
566 Ga0501038_0073880
567 Ga0501038_0143108
568 Ga0501039_0008990
569 Ga0501041_0029341
570 Ga0501043_0006863
571 Ga0501043_0009012
572 Ga0501043_0009822
573 Ga0501043_0017026
574 Ga0501043_0059801
575 Ga0501046_0015795
576 Ga0501047_0006104
577 Ga0501047_0006934
578 Ga0501047_0008481
579 Ga0501047_0029250
580 Ga0501047_0067501
581 Ga0501047_0250888
582 Ga0501047_0344714
583 Ga0501048_0002527
584 Ga0501048_0068737
585 Ga0501068_0006739
586 Ga0501068_0090512
587 Ga0501070_0000906
588 Ga0501070_0109645
589 Ga0501070_0227343
590 Ga0501071_0000589
591 Ga0501072_0004241
592 Ga0501074_0001378
593 Ga0501076_0034025
594 Ga0501077_0037029
595 Ga0501079_0067528
596 Ga0501083_0015545
597 Ga0501035_0003531
598 Ga0501035_0010108
599 Ga0501035_0021742
600 Ga0501035_0094577
601 Ga0501035_0119997
602 Ga0501035_0149213
603 Ga0501035_0374009
604 Ga0501044_0004859
605 Ga0501044_0019214
606 Ga0501044_0022220
607 Ga0501044_0045006
608 Ga0501044_0059309
609 Ga0501044_0125049
610 Ga0501044_0138562
611 nmdc:mga03n38_9254_c1
612 nmdc:mga06z11_10959_c1
613 nmdc:mga07m45_23285_c1
614 Ga0495619_0050821
615 Ga0500578_0005328
616 Ga0500644_0010899
617 Ga0500566_0055372
618 Ga0500560_003289
619 Ga0500569_003680
620 Ga0500621_082302
621 Ga0500658_0003952
622 Ga0500561_0004152
623 Ga0500573_0051902
624 Ga0500573_0092595
625 Ga0500600_0024416
626 Ga0500616_0023018
627 Ga0500634_0047309
628 Ga0500587_003072
629 Ga0501082_0031610
630 2990089038
631 2547409947
632 2585307285
633 2585312716
634 2643760618
635 2643898772
636 2644264821
637 2644386222
638 2644409524
639 2644441114
640 2644627239
641 2784589189
642 2785339536
643 2785372466
644 2786673359
645 2793984142
646 2808846618
647 2808848808
648 2808914275
649 2809232798
650 2811843739
651 2812355069
652 2812477962
653 2852638598
654 2862286313
655 2862292781
656 2862386058
657 2862508253
658 2863411111
659 2867375077
660 2867431020
661 2877678197
662 2912716884
663 2912727041
664 2912761542
665 2918508446
666 2935393046
667 2946052778
668 2946070832
669 2946079767
670 2947228406
671 2954003346
672 2954383319
673 2954679661
674 2954684494
675 2954713635
676 2954723601
677 2954738232
678 2954742504
679 2954757093
680 2954761468
681 2990046567
682 2990060330
683 2997602095
684 3006322673
685 3006427130
686 3006495009
687 8008565297
688 8008575643
689 8023626250
690 8025536142
691 8047895516
692 8048128456
693 8048363438
694 8048372541
695 8048381475
696 8056668839

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

165

229

0.96

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

274

384

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8h70-assembly1.cif.gz_A crystal structure of the catalytic atp-binding domain of the phor sensor histidine kinase from vibrio cholera 0.9089 221 366
7cch-assembly1.cif.gz_A-2 acinetobacter baumannii histidine kinase ades 0.9012 160 369
3a0y-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 3: 1,2-propanediol, orthorombic) 0.8992 219 366
3a0w-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) for mad phasing (nucleotide free form 2, orthorombic) 0.8969 219 366
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.8915 219 366
ID Description Score Start End Superfamily
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9403 218 366 3.30.565.10
af_P9WGK5_228_381_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9369 219 370 3.30.565.10
af_P77485_332_480_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9307 219 367 3.30.565.10
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9275 218 366 3.30.565.10
af_P77485_332_480_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9247 219 367 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A2V8C8X0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9329 145 370 GO:0000155
GO:0004721
GO:0005886
GO:0016036
AF-A0A6I2XYW6-F1-model_v4 Sensor-like histidine kinase SenX3 (EC 2.7.13.3) 0.9326 219 366 GO:0000155
GO:0004721
GO:0005886
GO:0016036
AF-A0A0L8EXI5-F1-model_v4 deleted 0.9252 201 365
AF-A0A7C1K4H0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9235 143 370 GO:0000155
GO:0000156
GO:0006355
GO:0007234
GO:0016020
GO:0030295
AF-A0A6N7AY39-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9218 143 370 GO:0000155
GO:0000156
GO:0007234
GO:0016020
GO:0030295

Map