F413954

General Info

Members Datasets Scaffolds Average Seq Length
339 171 678 207

Family's Representative Sequence

Representative Sequence 3300026041|Ga0207639_10514399|Ga0207639_105143991
Length 241
Sequence MAIYTKKYQRKKYFVEQGLLTSSGYLVNEYAIVLQPHEELSNTIMEEKKLYAETYQCPEALYVKPRITLVHFKQHELMETHIVRLVKNITATLSDFKVELKNFGSFPSHTIYINVVSKVQIMDIVKELKASQKLMKLDDDNKPHFLTEPNIGIARKLLPWQYEKSWIEYEHKHFHGRFIADHVLLLKRRENTKMWKTANRFDFENIKTDVKQGALFEALRPHPLQGSYESEKIKNVNKVPH

Samples

Sample ID Description Type Environment
1 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
54 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
129 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
130 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
131 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
132 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
133 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
137 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
138 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
141 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
142 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
143 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
144 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
147 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
148 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
149 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
152 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
166 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
167 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
171 2818991444 Filimonas endophytica 3197 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.71
Metatranscriptomes 0
Isolates 0.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.13
Nodule 0
Rhizoplane 0.29
Rhizosphere 92.04
Stem 0
Stem Tuber 0
Unclassified 14.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207639_10514399 3300026041 Bacteria 1095
2 JGI24740J21852_10021862 3300001979 Bacteria 2211
3 JGI25406J46586_10023148 3300003203 Bacteria 2459
4 rootH2_10013990 3300003320 Bacteria 8181
5 rootL2_10159983 3300003322 Unclassified 4027
6 rootH1_10037093 3300003323 Bacteria 5298
7 rootH1_10076818 3300003323 Bacteria 2326
8 rootH1_10098607 3300003323 Bacteria 2444
9 JGI25160J50197_1001682 3300003354 Bacteria 10776
10 Ga0065712_10119833 3300005290 Bacteria 1680
11 Ga0065712_10468318 3300005290 Bacteria 672
12 Ga0070676_10004018 3300005328 Bacteria 7721
13 Ga0070676_10151236 3300005328 Bacteria 1486
14 Ga0070683_100024535 3300005329 Bacteria 5402
15 Ga0070683_100259011 3300005329 Bacteria 1654
16 Ga0070690_100052249 3300005330 Bacteria 2612
17 Ga0070670_100043817 3300005331 Bacteria 3846
18 Ga0070670_100116872 3300005331 Bacteria 2300
19 Ga0070670_100463587 3300005331 Bacteria 1124
20 Ga0068869_100004408 3300005334 Bacteria 8746
21 Ga0068869_100052935 3300005334 Unclassified 2949
22 Ga0068869_100361942 3300005334 Bacteria 1185
23 Ga0068869_100418729 3300005334 Unclassified 1105
24 Ga0070666_10015418 3300005335 Bacteria 4875
25 Ga0070666_10354310 3300005335 Bacteria 1051
26 Ga0070666_10397942 3300005335 Bacteria 990
27 Ga0068868_100011935 3300005338 Bacteria 6337
28 Ga0068868_100064056 3300005338 Bacteria 2917
29 Ga0068868_100120402 3300005338 Bacteria 2140
30 Ga0070660_100237701 3300005339 Unclassified 1483
31 Ga0070660_100620361 3300005339 Bacteria 905
32 Ga0070689_101018377 3300005340 Unclassified 737
33 Ga0070661_100002954 3300005344 Bacteria 11729
34 Ga0070661_100550366 3300005344 Bacteria 928
35 Ga0070661_100635163 3300005344 Bacteria 866
36 Ga0070668_100008365 3300005347 Bacteria 7683
37 Ga0070668_100986867 3300005347 Unclassified 756
38 Ga0070669_100144670 3300005353 Bacteria 1836
39 Ga0070675_100235009 3300005354 Bacteria 1600
40 Ga0070675_100734530 3300005354 Bacteria 900
41 Ga0070671_100051033 3300005355 Bacteria 3440
42 Ga0070671_100150227 3300005355 Bacteria 1967
43 Ga0070671_100150889 3300005355 Bacteria 1962
44 Ga0070671_100156514 3300005355 Bacteria 1925
45 Ga0070671_100418754 3300005355 Bacteria 1147
46 Ga0070673_100003313 3300005364 Bacteria 10002
47 Ga0070673_100067779 3300005364 Bacteria 2855
48 Ga0070673_100472233 3300005364 Unclassified 1131
49 Ga0070688_100116241 3300005365 Bacteria 1786
50 Ga0070659_100037882 3300005366 Bacteria 3760
51 Ga0070659_100265665 3300005366 Unclassified 1424
52 Ga0070659_100700017 3300005366 Bacteria 876
53 Ga0070667_100281078 3300005367 Bacteria 1494
54 Ga0070667_100284682 3300005367 Bacteria 1485
55 Ga0070667_100635025 3300005367 Bacteria 985
56 Ga0070678_100025270 3300005456 Bacteria 3993
57 Ga0070662_100032817 3300005457 Bacteria 3651
58 Ga0070662_100160200 3300005457 Bacteria 1760
59 Ga0070662_100395630 3300005457 Bacteria 1139
60 Ga0068867_100071723 3300005459 Unclassified 2591
61 Ga0068867_100132550 3300005459 Bacteria 1938
62 Ga0070685_10190108 3300005466 Bacteria 1328
63 Ga0070698_100162354 3300005471 Bacteria 2178
64 Ga0070679_100246621 3300005530 Bacteria 1743
65 Ga0070684_100054310 3300005535 Bacteria 3491
66 Ga0070684_100198013 3300005535 Unclassified 1829
67 Ga0070684_100486391 3300005535 Bacteria 1143
68 Ga0068853_100593742 3300005539 Unclassified 1051
69 Ga0068853_100632164 3300005539 Bacteria 1018
70 Ga0070672_100038056 3300005543 Bacteria 3673
71 Ga0070672_100389929 3300005543 Bacteria 1192
72 Ga0070686_100121932 3300005544 Bacteria 1791
73 Ga0070693_100243194 3300005547 Bacteria 1189
74 Ga0070693_100269547 3300005547 Bacteria 1136
75 Ga0070665_100130300 3300005548 Bacteria 2517
76 Ga0068855_100010786 3300005563 Bacteria 11030
77 Ga0068855_100130725 3300005563 Bacteria 2868
78 Ga0068855_100441099 3300005563 Bacteria 1422
79 Ga0070664_100015084 3300005564 Bacteria 6308
80 Ga0070664_100269098 3300005564 Unclassified 1534
81 Ga0068857_100063430 3300005577 Bacteria 3284
82 Ga0068857_100387254 3300005577 Bacteria 1299
83 Ga0068854_100341715 3300005578 Bacteria 1223
84 Ga0068856_100043375 3300005614 Bacteria 4426
85 Ga0068856_100826698 3300005614 Unclassified 946
86 Ga0068856_100830730 3300005614 Bacteria 943
87 Ga0068852_100006622 3300005616 Bacteria 8392
88 Ga0068852_100254049 3300005616 Bacteria 1685
89 Ga0068852_100555446 3300005616 Bacteria 1149
90 Ga0068852_100612820 3300005616 Bacteria 1094
91 Ga0068852_100787275 3300005616 Bacteria 965
92 Ga0068859_100075509 3300005617 Bacteria 3411
93 Ga0068859_100751109 3300005617 Bacteria 1064
94 Ga0068864_100137877 3300005618 Bacteria 2198
95 Ga0068864_100252212 3300005618 Bacteria 1639
96 Ga0068866_10113503 3300005718 Bacteria 1516
97 Ga0068861_100110319 3300005719 Bacteria 2203
98 Ga0068861_100652187 3300005719 Bacteria 972
99 Ga0068861_100887936 3300005719 Unclassified 843
100 Ga0068863_100211917 3300005841 Unclassified 1866
101 Ga0068863_100465086 3300005841 Bacteria 1242
102 Ga0068858_100005962 3300005842 Bacteria 11898
103 Ga0068860_100002687 3300005843 Bacteria 18508
104 Ga0068860_100055378 3300005843 Bacteria 3770
105 Ga0068860_100170932 3300005843 Bacteria 2099
106 Ga0068860_100555250 3300005843 Bacteria 1151
107 Ga0068862_100167960 3300005844 Bacteria 1962
108 Ga0081539_10030936 3300005985 Bacteria 3310
109 Ga0081539_10140799 3300005985 Bacteria 1173
110 Ga0070715_10256971 3300006163 Bacteria 916
111 Ga0075366_10054282 3300006195 Bacteria 2380
112 Ga0075366_10181120 3300006195 Bacteria 1280
113 Ga0097621_100137056 3300006237 Bacteria 2088
114 Ga0097621_100223691 3300006237 Unclassified 1641
115 Ga0068871_100004492 3300006358 Bacteria 9715
116 Ga0068871_100135837 3300006358 Bacteria 2088
117 Ga0068871_100314481 3300006358 Bacteria 1377
118 Ga0068871_100665757 3300006358 Bacteria 951
119 Ga0068865_100366921 3300006881 Bacteria 1171
120 Ga0068865_100501624 3300006881 Unclassified 1012
121 Ga0097620_100075508 3300006931 Bacteria 3411
122 Ga0097620_100751108 3300006931 Bacteria 1064
123 Ga0075435_100312020 3300007076 Bacteria 1346
124 Ga0105240_10147111 3300009093 Bacteria 2810
125 Ga0105240_10372768 3300009093 Bacteria 1614
126 Ga0105240_10712672 3300009093 Unclassified 1094
127 Ga0105245_10373743 3300009098 Bacteria 1418
128 Ga0105247_10066863 3300009101 Unclassified 2239
129 Ga0114129_10004318 3300009147 Bacteria 20100
130 Ga0105243_10781069 3300009148 Bacteria 939
131 Ga0105241_10069105 3300009174 Bacteria 2738
132 Ga0105241_10287318 3300009174 Bacteria 1407
133 Ga0105241_10499270 3300009174 Bacteria 1085
134 Ga0105241_11227857 3300009174 Bacteria 711
135 Ga0105242_10119481 3300009176 Bacteria 2259
136 Ga0105242_10209419 3300009176 Bacteria 1737
137 Ga0105242_10244614 3300009176 Bacteria 1614
138 Ga0105242_10303055 3300009176 Unclassified 1459
139 Ga0105237_10013218 3300009545 Bacteria 8659
140 Ga0105237_10059659 3300009545 Bacteria 3816
141 Ga0105237_10550777 3300009545 Bacteria 1160
142 Ga0105249_10089287 3300009553 Bacteria 2880
143 Ga0105249_10248928 3300009553 Unclassified 1761
144 Ga0105249_10270197 3300009553 Bacteria 1694
145 Ga0105239_10004608 3300010375 Bacteria 16413
146 Ga0105239_10015804 3300010375 Bacteria 8352
147 Ga0105239_10245544 3300010375 Bacteria 2010
148 Ga0105246_10159135 3300011119 Bacteria 1719
149 Ga0157371_10018970 3300013102 Bacteria 5077
150 Ga0157371_10230988 3300013102 Bacteria 1329
151 Ga0157371_10273169 3300013102 Bacteria 1220
152 Ga0157371_10770079 3300013102 Unclassified 724
153 Ga0157370_10047035 3300013104 Bacteria 4136
154 Ga0157370_10145872 3300013104 Bacteria 2204
155 Ga0157370_10189098 3300013104 Bacteria 1911
156 Ga0157370_10381919 3300013104 Unclassified 1297
157 Ga0157370_10754436 3300013104 Bacteria 887
158 Ga0157370_10865709 3300013104 Unclassified 821
159 Ga0157369_10033551 3300013105 Bacteria 5640
160 Ga0157369_10367603 3300013105 Unclassified 1493
161 Ga0157369_10421733 3300013105 Bacteria 1383
162 Ga0157369_10568462 3300013105 Unclassified 1171
163 Ga0157374_10032544 3300013296 Bacteria 4749
164 Ga0157374_10137097 3300013296 Bacteria 2373
165 Ga0157374_10286689 3300013296 Bacteria 1627
166 Ga0157374_10349594 3300013296 Bacteria 1469
167 Ga0157374_10714288 3300013296 Bacteria 1016
168 Ga0157374_10917743 3300013296 Bacteria 894
169 Ga0157374_11189202 3300013296 Bacteria 784
170 Ga0157378_10057703 3300013297 Bacteria 3460
171 Ga0157378_10111292 3300013297 Bacteria 2511
172 Ga0163162_10002704 3300013306 Bacteria 16820
173 Ga0163162_10183717 3300013306 Unclassified 2217
174 Ga0163162_10226983 3300013306 Bacteria 1997
175 Ga0163162_10263289 3300013306 Bacteria 1856
176 Ga0163162_10310370 3300013306 Bacteria 1710
177 Ga0163162_10572007 3300013306 Unclassified 1257
178 Ga0157372_10112419 3300013307 Unclassified 3120
179 Ga0157372_10149268 3300013307 Bacteria 2697
180 Ga0157372_10152395 3300013307 Bacteria 2669
181 Ga0157372_10742680 3300013307 Unclassified 1141
182 Ga0157372_11456620 3300013307 Bacteria 789
183 Ga0157375_10026122 3300013308 Bacteria 5437
184 Ga0157375_10028795 3300013308 Bacteria 5213
185 Ga0157375_10230015 3300013308 Bacteria 2013
186 Ga0157375_10268355 3300013308 Unclassified 1868
187 Ga0157375_11192641 3300013308 Unclassified 893
188 Ga0163163_10004484 3300014325 Bacteria 11913
189 Ga0163163_10023248 3300014325 Bacteria 5881
190 Ga0163163_10024113 3300014325 Bacteria 5788
191 Ga0163163_10580660 3300014325 Bacteria 1184
192 Ga0157380_10724215 3300014326 Bacteria 1003
193 Ga0157380_11049058 3300014326 Bacteria 851
194 Ga0157377_10200337 3300014745 Unclassified 1267
195 Ga0157377_10376865 3300014745 Bacteria 959
196 Ga0157379_10060548 3300014968 Bacteria 3385
197 Ga0157379_10250825 3300014968 Bacteria 1607
198 Ga0157379_10566646 3300014968 Bacteria 1058
199 Ga0157376_10025212 3300014969 Bacteria 4681
200 Ga0157376_10180733 3300014969 Bacteria 1928
201 Ga0157376_10298359 3300014969 Bacteria 1524
202 Ga0183373_1007 3300015682 Bacteria 282776
203 Ga0163161_10002911 3300017792 Bacteria 12114
204 Ga0163161_10155500 3300017792 Bacteria 1741
205 Ga0163161_10569916 3300017792 Bacteria 930
206 Ga0207426_1000023 3300025302 Bacteria 545465
207 Ga0207697_10172636 3300025315 Bacteria 946
208 Ga0207656_10015704 3300025321 Unclassified 2935
209 Ga0207656_10066847 3300025321 Bacteria 1590
210 Ga0207680_10072425 3300025903 Bacteria 2139
211 Ga0207680_10074523 3300025903 Bacteria 2114
212 Ga0207680_10196409 3300025903 Unclassified 1372
213 Ga0207647_10013365 3300025904 Bacteria 5694
214 Ga0207645_10008358 3300025907 Bacteria 7222
215 Ga0207645_10174868 3300025907 Bacteria 1408
216 Ga0207643_10166532 3300025908 Bacteria 1328
217 Ga0207705_10040337 3300025909 Bacteria 3348
218 Ga0207705_10306904 3300025909 Bacteria 1218
219 Ga0207654_10029977 3300025911 Bacteria 2982
220 Ga0207654_10155299 3300025911 Bacteria 1473
221 Ga0207695_10417899 3300025913 Unclassified 1225
222 Ga0207671_10058131 3300025914 Bacteria 2867
223 Ga0207671_10102058 3300025914 Bacteria 2174
224 Ga0207657_10057820 3300025919 Bacteria 3340
225 Ga0207649_10112976 3300025920 Bacteria 1818
226 Ga0207649_10155426 3300025920 Bacteria 1579
227 Ga0207650_10006244 3300025925 Bacteria 8119
228 Ga0207650_10069471 3300025925 Bacteria 2646
229 Ga0207650_10192279 3300025925 Bacteria 1631
230 Ga0207659_10951008 3300025926 Bacteria 739
231 Ga0207644_10152949 3300025931 Bacteria 1787
232 Ga0207644_10155317 3300025931 Bacteria 1774
233 Ga0207644_10173594 3300025931 Bacteria 1685
234 Ga0207644_10242177 3300025931 Bacteria 1436
235 Ga0207644_10351069 3300025931 Bacteria 1198
236 Ga0207644_10936629 3300025931 Bacteria 726
237 Ga0207690_10023540 3300025932 Bacteria 3844
238 Ga0207706_10007448 3300025933 Bacteria 10123
239 Ga0207706_10042040 3300025933 Bacteria 4050
240 Ga0207706_10101741 3300025933 Bacteria 2528
241 Ga0207686_10070247 3300025934 Bacteria 2249
242 Ga0207691_10001320 3300025940 Bacteria 24748
243 Ga0207689_10084498 3300025942 Bacteria 2609
244 Ga0207689_10153549 3300025942 Bacteria 1898
245 Ga0207661_10162398 3300025944 Bacteria 1939
246 Ga0207661_10455946 3300025944 Bacteria 1165
247 Ga0207679_10143646 3300025945 Bacteria 1932
248 Ga0207679_10618395 3300025945 Bacteria 977
249 Ga0207667_10012290 3300025949 Bacteria 9878
250 Ga0207667_10497203 3300025949 Bacteria 1237
251 Ga0207651_10005243 3300025960 Bacteria 6628
252 Ga0207651_10051833 3300025960 Bacteria 2795
253 Ga0207712_10110773 3300025961 Bacteria 2059
254 Ga0207712_10551058 3300025961 Bacteria 992
255 Ga0207668_11108698 3300025972 Bacteria 710
256 Ga0207640_10047785 3300025981 Bacteria 2763
257 Ga0207640_10496333 3300025981 Bacteria 1016
258 Ga0207640_10782597 3300025981 Unclassified 825
259 Ga0207658_10133867 3300025986 Unclassified 1995
260 Ga0207658_10346181 3300025986 Bacteria 1293
261 Ga0207677_10017138 3300026023 Bacteria 4311
262 Ga0207677_10035018 3300026023 Unclassified 3256
263 Ga0207677_10590364 3300026023 Unclassified 973
264 Ga0207703_11166483 3300026035 Bacteria 740
265 Ga0207639_10443074 3300026041 Unclassified 1178
266 Ga0207639_10611629 3300026041 Bacteria 1006
267 Ga0207702_10031482 3300026078 Bacteria 4421
268 Ga0207702_10653898 3300026078 Unclassified 1034
269 Ga0207641_10038405 3300026088 Bacteria 4003
270 Ga0207648_10004802 3300026089 Bacteria 13797
271 Ga0207648_10008946 3300026089 Bacteria 9633
272 Ga0207648_10060960 3300026089 Bacteria 3289
273 Ga0207648_10062909 3300026089 Bacteria 3235
274 Ga0207648_10165352 3300026089 Bacteria 1955
275 Ga0207676_10060465 3300026095 Bacteria 2997
276 Ga0207676_10120034 3300026095 Bacteria 2215
277 Ga0207676_10264049 3300026095 Bacteria 1556
278 Ga0207676_10791611 3300026095 Bacteria 924
279 Ga0207674_10015401 3300026116 Bacteria 8400
280 Ga0207674_10072698 3300026116 Bacteria 3454
281 Ga0207674_10355301 3300026116 Bacteria 1417
282 Ga0207675_100165969 3300026118 Bacteria 2109
283 Ga0207683_10010937 3300026121 Bacteria 7741
284 Ga0207683_10011746 3300026121 Bacteria 7473
285 Ga0207698_10138297 3300026142 Unclassified 2093
286 Ga0207698_10284111 3300026142 Bacteria 1532
287 Ga0207698_10493900 3300026142 Bacteria 1190
288 Ga0268266_10050546 3300028379 Bacteria 3567
289 Ga0268264_10039442 3300028381 Bacteria 3902
290 Ga0268264_10259910 3300028381 Bacteria 1617
291 Ga0307511_10000554 3300030521 Bacteria 40123
292 Ga0307508_10002004 3300031616 Bacteria 22212
293 Ga0307410_11077304 3300031852 Bacteria 696
294 Ga0373927_0169261 3300035695 Bacteria 1432
295 Ga0373933_0312710 3300035724 Bacteria 1018
296 Ga0373937_0551865 3300036401 Unclassified 1094
297 Ga0373925_0474669 3300037068 Bacteria 1026
298 Ga0436365_1018315 3300039437 Bacteria 1136
299 Ga0436365_1303461 3300039437 Bacteria 789
300 Ga0451853_0945366 3300041512 Bacteria 1087
301 Ga0439448_0050438 3300042005 Unclassified 1362
302 Ga0466969_0001185 3300044656 Bacteria 14085
303 Ga0466972_0000123 3300044658 Bacteria 65577
304 Ga0466972_0146765 3300044658 Bacteria 1110
305 Ga0466966_0453913 3300044684 Unclassified 770
306 Ga0466961_0342946 3300044693 Unclassified 910
307 Ga0466964_0171316 3300044706 Bacteria 1022
308 Ga0466968_0035919 3300044735 Bacteria 2075
309 Ga0466957_0000084 3300044842 Bacteria 37711
310 Ga0466957_0002850 3300044842 Bacteria 9355
311 Ga0466959_0000035 3300045049 Bacteria 108669
312 Ga0466967_0298373 3300045976 Bacteria 1550
313 Ga0466967_0473729 3300045976 Bacteria 1226
314 Ga0495650_0087358 3300046471 Bacteria 1192
315 Ga0495618_0072941 3300046514 Bacteria 2185
316 Ga0495628_0210724 3300046516 Unclassified 1462
317 Ga0495586_0141578 3300046535 Bacteria 1350
318 Ga0495635_0200713 3300046663 Unclassified 1353
319 Ga0495676_0273299 3300047321 Bacteria 1146
320 Ga0496108_0142296 3300048911 Bacteria 2067
321 Ga0496124_0152424 3300048927 Bacteria 1811
322 Ga0501034_0000004 3300049571 Bacteria 382255
323 Ga0501037_0047103 3300049573 Bacteria 3161
324 Ga0501038_0091841 3300049574 Bacteria 2543
325 Ga0501047_0341917 3300049581 Bacteria 1334
326 Ga0501035_0226455 3300049822 Bacteria 1595
327 Ga0501044_0087338 3300049823 Bacteria 3150
328 nmdc:mga0k408_153445_c1 3300050493 Bacteria 1372
329 nmdc:mga0k408_26949_c1 3300050493 Bacteria 2435
330 nmdc:mga05p37_59623_c1 3300050507 Bacteria 4700
331 Ga0500578_0000060 3300053086 Bacteria 118274
332 Ga0500583_0000003 3300053092 Bacteria 229587
333 Ga0500573_0299292 3300053140 Unclassified 805
334 Ga0500588_0003646 3300053146 Bacteria 3270
335 Ga0500590_155508 3300053148 Bacteria 1026
336 Ga0500616_0008618 3300053153 Bacteria 6310
337 Ga0500622_0203122 3300053156 Bacteria 900
338 Ga0500637_0088879 3300053178 Bacteria 1788
339 2819586319 2818991444 Bacteria 6968812
340 Ga0207639_10514399
341 JGI24740J21852_10021862
342 JGI25406J46586_10023148
343 rootH2_10013990
344 rootL2_10159983
345 rootH1_10037093
346 rootH1_10076818
347 rootH1_10098607
348 JGI25160J50197_1001682
349 Ga0065712_10119833
350 Ga0065712_10468318
351 Ga0070676_10004018
352 Ga0070676_10151236
353 Ga0070683_100024535
354 Ga0070683_100259011
355 Ga0070690_100052249
356 Ga0070670_100043817
357 Ga0070670_100116872
358 Ga0070670_100463587
359 Ga0068869_100004408
360 Ga0068869_100052935
361 Ga0068869_100361942
362 Ga0068869_100418729
363 Ga0070666_10015418
364 Ga0070666_10354310
365 Ga0070666_10397942
366 Ga0068868_100011935
367 Ga0068868_100064056
368 Ga0068868_100120402
369 Ga0070660_100237701
370 Ga0070660_100620361
371 Ga0070689_101018377
372 Ga0070661_100002954
373 Ga0070661_100550366
374 Ga0070661_100635163
375 Ga0070668_100008365
376 Ga0070668_100986867
377 Ga0070669_100144670
378 Ga0070675_100235009
379 Ga0070675_100734530
380 Ga0070671_100051033
381 Ga0070671_100150227
382 Ga0070671_100150889
383 Ga0070671_100156514
384 Ga0070671_100418754
385 Ga0070673_100003313
386 Ga0070673_100067779
387 Ga0070673_100472233
388 Ga0070688_100116241
389 Ga0070659_100037882
390 Ga0070659_100265665
391 Ga0070659_100700017
392 Ga0070667_100281078
393 Ga0070667_100284682
394 Ga0070667_100635025
395 Ga0070678_100025270
396 Ga0070662_100032817
397 Ga0070662_100160200
398 Ga0070662_100395630
399 Ga0068867_100071723
400 Ga0068867_100132550
401 Ga0070685_10190108
402 Ga0070698_100162354
403 Ga0070679_100246621
404 Ga0070684_100054310
405 Ga0070684_100198013
406 Ga0070684_100486391
407 Ga0068853_100593742
408 Ga0068853_100632164
409 Ga0070672_100038056
410 Ga0070672_100389929
411 Ga0070686_100121932
412 Ga0070693_100243194
413 Ga0070693_100269547
414 Ga0070665_100130300
415 Ga0068855_100010786
416 Ga0068855_100130725
417 Ga0068855_100441099
418 Ga0070664_100015084
419 Ga0070664_100269098
420 Ga0068857_100063430
421 Ga0068857_100387254
422 Ga0068854_100341715
423 Ga0068856_100043375
424 Ga0068856_100826698
425 Ga0068856_100830730
426 Ga0068852_100006622
427 Ga0068852_100254049
428 Ga0068852_100555446
429 Ga0068852_100612820
430 Ga0068852_100787275
431 Ga0068859_100075509
432 Ga0068859_100751109
433 Ga0068864_100137877
434 Ga0068864_100252212
435 Ga0068866_10113503
436 Ga0068861_100110319
437 Ga0068861_100652187
438 Ga0068861_100887936
439 Ga0068863_100211917
440 Ga0068863_100465086
441 Ga0068858_100005962
442 Ga0068860_100002687
443 Ga0068860_100055378
444 Ga0068860_100170932
445 Ga0068860_100555250
446 Ga0068862_100167960
447 Ga0081539_10030936
448 Ga0081539_10140799
449 Ga0070715_10256971
450 Ga0075366_10054282
451 Ga0075366_10181120
452 Ga0097621_100137056
453 Ga0097621_100223691
454 Ga0068871_100004492
455 Ga0068871_100135837
456 Ga0068871_100314481
457 Ga0068871_100665757
458 Ga0068865_100366921
459 Ga0068865_100501624
460 Ga0097620_100075508
461 Ga0097620_100751108
462 Ga0075435_100312020
463 Ga0105240_10147111
464 Ga0105240_10372768
465 Ga0105240_10712672
466 Ga0105245_10373743
467 Ga0105247_10066863
468 Ga0114129_10004318
469 Ga0105243_10781069
470 Ga0105241_10069105
471 Ga0105241_10287318
472 Ga0105241_10499270
473 Ga0105241_11227857
474 Ga0105242_10119481
475 Ga0105242_10209419
476 Ga0105242_10244614
477 Ga0105242_10303055
478 Ga0105237_10013218
479 Ga0105237_10059659
480 Ga0105237_10550777
481 Ga0105249_10089287
482 Ga0105249_10248928
483 Ga0105249_10270197
484 Ga0105239_10004608
485 Ga0105239_10015804
486 Ga0105239_10245544
487 Ga0105246_10159135
488 Ga0157371_10018970
489 Ga0157371_10230988
490 Ga0157371_10273169
491 Ga0157371_10770079
492 Ga0157370_10047035
493 Ga0157370_10145872
494 Ga0157370_10189098
495 Ga0157370_10381919
496 Ga0157370_10754436
497 Ga0157370_10865709
498 Ga0157369_10033551
499 Ga0157369_10367603
500 Ga0157369_10421733
501 Ga0157369_10568462
502 Ga0157374_10032544
503 Ga0157374_10137097
504 Ga0157374_10286689
505 Ga0157374_10349594
506 Ga0157374_10714288
507 Ga0157374_10917743
508 Ga0157374_11189202
509 Ga0157378_10057703
510 Ga0157378_10111292
511 Ga0163162_10002704
512 Ga0163162_10183717
513 Ga0163162_10226983
514 Ga0163162_10263289
515 Ga0163162_10310370
516 Ga0163162_10572007
517 Ga0157372_10112419
518 Ga0157372_10149268
519 Ga0157372_10152395
520 Ga0157372_10742680
521 Ga0157372_11456620
522 Ga0157375_10026122
523 Ga0157375_10028795
524 Ga0157375_10230015
525 Ga0157375_10268355
526 Ga0157375_11192641
527 Ga0163163_10004484
528 Ga0163163_10023248
529 Ga0163163_10024113
530 Ga0163163_10580660
531 Ga0157380_10724215
532 Ga0157380_11049058
533 Ga0157377_10200337
534 Ga0157377_10376865
535 Ga0157379_10060548
536 Ga0157379_10250825
537 Ga0157379_10566646
538 Ga0157376_10025212
539 Ga0157376_10180733
540 Ga0157376_10298359
541 Ga0183373_1007
542 Ga0163161_10002911
543 Ga0163161_10155500
544 Ga0163161_10569916
545 Ga0207426_1000023
546 Ga0207697_10172636
547 Ga0207656_10015704
548 Ga0207656_10066847
549 Ga0207680_10072425
550 Ga0207680_10074523
551 Ga0207680_10196409
552 Ga0207647_10013365
553 Ga0207645_10008358
554 Ga0207645_10174868
555 Ga0207643_10166532
556 Ga0207705_10040337
557 Ga0207705_10306904
558 Ga0207654_10029977
559 Ga0207654_10155299
560 Ga0207695_10417899
561 Ga0207671_10058131
562 Ga0207671_10102058
563 Ga0207657_10057820
564 Ga0207649_10112976
565 Ga0207649_10155426
566 Ga0207650_10006244
567 Ga0207650_10069471
568 Ga0207650_10192279
569 Ga0207659_10951008
570 Ga0207644_10152949
571 Ga0207644_10155317
572 Ga0207644_10173594
573 Ga0207644_10242177
574 Ga0207644_10351069
575 Ga0207644_10936629
576 Ga0207690_10023540
577 Ga0207706_10007448
578 Ga0207706_10042040
579 Ga0207706_10101741
580 Ga0207686_10070247
581 Ga0207691_10001320
582 Ga0207689_10084498
583 Ga0207689_10153549
584 Ga0207661_10162398
585 Ga0207661_10455946
586 Ga0207679_10143646
587 Ga0207679_10618395
588 Ga0207667_10012290
589 Ga0207667_10497203
590 Ga0207651_10005243
591 Ga0207651_10051833
592 Ga0207712_10110773
593 Ga0207712_10551058
594 Ga0207668_11108698
595 Ga0207640_10047785
596 Ga0207640_10496333
597 Ga0207640_10782597
598 Ga0207658_10133867
599 Ga0207658_10346181
600 Ga0207677_10017138
601 Ga0207677_10035018
602 Ga0207677_10590364
603 Ga0207703_11166483
604 Ga0207639_10443074
605 Ga0207639_10611629
606 Ga0207702_10031482
607 Ga0207702_10653898
608 Ga0207641_10038405
609 Ga0207648_10004802
610 Ga0207648_10008946
611 Ga0207648_10060960
612 Ga0207648_10062909
613 Ga0207648_10165352
614 Ga0207676_10060465
615 Ga0207676_10120034
616 Ga0207676_10264049
617 Ga0207676_10791611
618 Ga0207674_10015401
619 Ga0207674_10072698
620 Ga0207674_10355301
621 Ga0207675_100165969
622 Ga0207683_10010937
623 Ga0207683_10011746
624 Ga0207698_10138297
625 Ga0207698_10284111
626 Ga0207698_10493900
627 Ga0268266_10050546
628 Ga0268264_10039442
629 Ga0268264_10259910
630 Ga0307511_10000554
631 Ga0307508_10002004
632 Ga0307410_11077304
633 Ga0373927_0169261
634 Ga0373933_0312710
635 Ga0373937_0551865
636 Ga0373925_0474669
637 Ga0436365_1018315
638 Ga0436365_1303461
639 Ga0451853_0945366
640 Ga0439448_0050438
641 Ga0466969_0001185
642 Ga0466972_0000123
643 Ga0466972_0146765
644 Ga0466966_0453913
645 Ga0466961_0342946
646 Ga0466964_0171316
647 Ga0466968_0035919
648 Ga0466957_0000084
649 Ga0466957_0002850
650 Ga0466959_0000035
651 Ga0466967_0298373
652 Ga0466967_0473729
653 Ga0495650_0087358
654 Ga0495618_0072941
655 Ga0495628_0210724
656 Ga0495586_0141578
657 Ga0495635_0200713
658 Ga0495676_0273299
659 Ga0496108_0142296
660 Ga0496124_0152424
661 Ga0501034_0000004
662 Ga0501037_0047103
663 Ga0501038_0091841
664 Ga0501047_0341917
665 Ga0501035_0226455
666 Ga0501044_0087338
667 nmdc:mga0k408_153445_c1
668 nmdc:mga0k408_26949_c1
669 nmdc:mga05p37_59623_c1
670 Ga0500578_0000060
671 Ga0500583_0000003
672 Ga0500573_0299292
673 Ga0500588_0003646
674 Ga0500590_155508
675 Ga0500616_0008618
676 Ga0500622_0203122
677 Ga0500637_0088879
678 2819586319

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13563

2_5_RNA_ligase2

2'-5' RNA ligase superfamily

36

192

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d4g-assembly1.cif.gz_B structure of yjcg protein, a putative 2'-5' rna ligase from bacillus subtilis 0.8423 15 188
2d4g-assembly1.cif.gz_B structure of yjcg protein, a putative 2'-5' rna ligase from bacillus subtilis 0.8281 15 188
5ldp-assembly2.cif.gz_B crystal structure of e.coli ligt complexed with atp 0.7229 13 188
5ldi-assembly3.cif.gz_C crystal structure of e.coli ligt in apo form 0.7169 13 188
5ldo-assembly4.cif.gz_D crystal structure of e.coli ligt complexed with 3'-amp 0.7165 12 188
ID Description Score Start End Superfamily
2d4gB00 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8315 16 188 3.90.1140.10
af_Q2FZP9_3_169_3.90.1140.10 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8305 17 188 3.90.1140.10
2d4gB00 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8174 16 188 3.90.1140.10
af_Q2FZP9_3_169_3.90.1140.10 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8168 17 188 3.90.1140.10
af_A0A0R4IU85_5_132_2.30.29.90 Mainly Beta;Roll;PH-domain like; 0.7419 162 187 2.30.29.90
ID Description Score Start End GO Terms
AF-A0A3E1NS71-F1-model_v4 2'-5' RNA ligase family protein 0.9619 19 200 GO:0016874
AF-A0A3B7MZX5-F1-model_v4 2'-5' RNA ligase family protein 0.9516 11 201
AF-A0A191TIW7-F1-model_v4 2'-5' RNA ligase 0.9502 10 201
AF-A0A2U0ZZ76-F1-model_v4 deleted 0.9358 1 201
AF-A0A386HMK3-F1-model_v4 2'-5' RNA ligase family protein 0.9355 7 201 GO:0016874

Map