F407156

General Info

Members Datasets Scaffolds Average Seq Length
323 280 149 466

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842264693|2842266458
Length 497
Sequence AASPHAAIRQFLLSLQSPARILVAISGGSDSTGLLLLLDEAVKAAPHLKASLCAATVDHGLRAGSADEAQQVAALCASLGIPHIIAAWQGEKPKTGIMAAARKARYELLAESAERFGANLIVTGHTYDDQCETLAMRGVRTEQLSSGIADAVLFDRRFWILRPLLFSSRADIRSFLRERRVAWIDDPSNEDVKYERVRVRRQLSADPATETDIRAAWKERLALSSAAAEWLDRHFRLQGGLLGQVLPDGLRQDHAVLAYALGRLTAVFGGQAFAPGRVQMERLLLFAAGNEPRRMTVGRVVFDLRRDGLYLARESRGILPLTLRPGEAGVWDGRFEAANGSGATIRIEAQGARSSPIPAPVTGIQPPRVGAVNDSTVPDESAARKDLGARDSCDERRNEGGESRGLPKAAWKRAVASAPVLSGEEVPLSPESIQAINLTPYFAPFDRFLTRFDFIFADRLSAVFAMAPYAGLPFRSIDGKTIGPLGLPWQQHGATLC

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
5 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
6 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
7 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
8 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
9 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
10 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
11 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
12 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
13 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
14 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
15 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
16 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
17 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
18 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
19 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
20 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
21 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
22 2519899620 Rhizobium sp. Pop5 Isolate Nodule
23 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
24 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
25 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
26 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
27 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
28 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
29 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
30 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
31 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
32 2643221568 Rhizobium sp. Root564 Isolate Unclassified
33 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
34 2718217882 Rhizobium sp. N741 Isolate Nodule
35 2718217927 Rhizobium sp. N324 Isolate Nodule
36 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
37 2718218009 Rhizobium sp. N561 Isolate Nodule
38 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
39 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
40 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
41 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
42 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
43 2718218363 Rhizobium sp. N113 Isolate Nodule
44 2718218365 Rhizobium sp. N731 Isolate Nodule
45 2718218366 Rhizobium sp. N621 Isolate Nodule
46 2718218423 Rhizobium sp. N941 Isolate Nodule
47 2721755514 Rhizobium sp. N6212 Isolate Nodule
48 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
49 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
50 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
51 2721755809 Rhizobium sp. N541 Isolate Nodule
52 2721755810 Rhizobium sp. N871 Isolate Nodule
53 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
54 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
55 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
56 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
57 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
58 2728369365 Rhizobium sp. N1341 Isolate Nodule
59 2728369397 Rhizobium sp. N1314 Isolate Nodule
60 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
61 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
62 2791355256 Rhizobium sp. M10 Isolate Nodule
63 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
64 2791355260 Rhizobium sp. L9 Isolate Nodule
65 2791355261 Rhizobium sp. J15 Isolate Nodule
66 2791355262 Rhizobium sp. M1 Isolate Nodule
67 2791355263 Rhizobium chutanense C5 Isolate Nodule
68 2791355264 Rhizobium sp. S9 Isolate Nodule
69 2791355265 Rhizobium sp. H4 Isolate Nodule
70 2791355266 Rhizobium sp. L43 Isolate Nodule
71 2791355267 Rhizobium sp. L18 Isolate Nodule
72 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
73 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
74 2802429633 Rhizobium anhuiense J3 Isolate Nodule
75 2802429634 Rhizobium anhuiense S10 Isolate Nodule
76 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
77 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
78 2802429637 Rhizobium anhuiense C15 Isolate Nodule
79 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
80 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
81 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
82 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
83 2838048938 Rhizobium pisi 27/80 Isolate Nodule
84 2838061910 Rhizobium phaseoli L15 Isolate Nodule
85 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
86 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
87 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
88 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
89 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
90 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
91 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
92 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
93 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
94 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
95 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
96 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
97 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
98 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
99 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
100 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
101 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
102 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
103 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
104 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
105 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
106 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
107 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
108 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
109 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
110 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
111 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
112 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
113 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
114 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
115 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
116 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
117 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
118 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
119 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
120 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
121 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
122 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
123 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
124 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
125 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
126 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
127 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
128 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
129 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
130 2933599457 Rhizobium phaseoli M3 Isolate Nodule
131 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
132 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
133 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
134 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
135 2936381700 Rhizobium chutanense C16 Isolate Unclassified
136 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
137 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
138 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
139 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
140 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
141 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
142 2996893221 Rhizobium sp. R635 Isolate Nodule
143 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
144 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
145 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
146 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
147 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
148 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
149 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
150 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
151 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
152 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
153 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
154 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
155 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
156 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
157 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
158 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
159 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
160 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
161 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
162 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
163 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
164 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
165 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
166 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
167 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
168 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
169 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
170 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
171 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
172 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
173 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
174 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
175 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
176 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
177 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
178 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
179 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
180 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
181 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
182 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
183 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
184 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
185 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
186 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
187 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
188 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
189 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
190 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
191 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
192 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
193 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
194 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
195 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
196 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
197 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
198 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
199 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
200 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
201 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
202 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
203 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
204 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
205 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
206 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
207 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
208 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
209 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
210 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
211 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
212 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
213 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
214 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
215 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
216 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
217 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
218 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
219 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
220 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
221 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
222 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
223 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
224 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
225 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
226 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
227 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
228 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
229 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
230 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
231 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
232 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
233 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
234 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
235 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
236 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
237 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
238 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
239 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
240 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
241 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
242 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
243 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
244 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
245 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
246 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
247 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
248 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
249 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
250 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
251 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
252 8005275841 Rhizobium sp. N4311 Isolate Nodule
253 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
254 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
255 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
256 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
257 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
258 8005382845 Rhizobium sp. R634 Isolate Nodule
259 8005395548 Rhizobium sp. R339 Isolate Nodule
260 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
261 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
262 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
263 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
264 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
265 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
266 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
267 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
268 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
269 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
270 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
271 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
272 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
273 8018176218 Rhizobium sp. N122 Isolate Nodule
274 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
275 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
276 8024501048 Rhizobium sp. H4 Isolate Nodule
277 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
278 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
279 8056382006 Rhizobium croatiense 13T Isolate Nodule
280 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 46.13
Metatranscriptomes 0
Isolates 53.87

Biome Distribution

Category Percentage (%)
Aerial Root 1.24
Bulb 0
Endosphere 24.15
Nodule 45.51
Rhizoplane 1.24
Rhizosphere 17.34
Stem 0
Stem Tuber 0
Unclassified 10.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000176 3300002739 Bacteria 15017
2 JGI25152J39213_1005821 3300002773 Bacteria 3498
3 JGI25152J39213_1006138 3300002773 Bacteria 3340
4 JGI25152J39213_1006297 3300002773 Bacteria 3273
5 JGI25150J39212_1008554 3300002774 Bacteria 1996
6 JGI25159J45721_1000724 3300002987 Bacteria 14403
7 JGI25151J46595_10000366 3300003187 Bacteria 47493
8 JGI25153J46596_10012761 3300003215 Bacteria 3600
9 JGI25153J46596_10014469 3300003215 Bacteria 3277
10 JGI25153J46596_10015390 3300003215 Bacteria 3118
11 JGI25160J50197_1004283 3300003354 Bacteria 6192
12 JGI25160J50197_1005267 3300003354 Bacteria 5413
13 JGI25161J50226_1000104 3300003374 Bacteria 67942
14 Ga0055526_1001175 3300003771 Bacteria 18963
15 Ga0055526_1006618 3300003771 Bacteria 6231
16 Ga0055524_1011423 3300003775 Bacteria 3474
17 Ga0055528_1002040 3300003790 Bacteria 11301
18 Ga0055528_1015865 3300003790 Bacteria 2695
19 Ga0055528_1016492 3300003790 Bacteria 2609
20 Ga0055540_1002904 3300003792 Bacteria 8675
21 Ga0055540_1004735 3300003792 Bacteria 6007
22 Ga0058692_1013604 3300003856 Bacteria 1887
23 Ga0055543_1000280 3300004625 Bacteria 37509
24 Ga0065165_1005059 3300005262 Bacteria 7680
25 Ga0075365_10059660 3300006038 Bacteria 2544
26 Ga0075363_100062697 3300006048 Bacteria 2005
27 Ga0075364_10001689 3300006051 Bacteria 12123
28 Ga0075362_10006282 3300006177 Bacteria 4417
29 Ga0075367_10065986 3300006178 Bacteria 2168
30 Ga0075369_10001597 3300006186 Bacteria 7791
31 Ga0075370_10002394 3300006353 Bacteria 8682
32 Ga0123341_1000014 3300009765 Bacteria 91980
33 Ga0123342_1021729 3300009766 Bacteria 4459
34 Ga0157371_10007369 3300013102 Bacteria 8914
35 Ga0209436_100023 3300025208 Bacteria 96401
36 Ga0209436_100027 3300025208 Bacteria 87534
37 Ga0207425_1004533 3300025245 Bacteria 4134
38 Ga0207425_1005754 3300025245 Bacteria 3489
39 Ga0209129_1002341 3300025258 Bacteria 9380
40 Ga0209129_1002503 3300025258 Bacteria 8962
41 Ga0209129_1003110 3300025258 Bacteria 7462
42 Ga0209673_1000060 3300025273 Bacteria 263602
43 Ga0209673_1000233 3300025273 Bacteria 108504
44 Ga0209673_1001293 3300025273 Bacteria 25567
45 Ga0209673_1014585 3300025273 Bacteria 3033
46 Ga0209130_1000173 3300025284 Bacteria 92248
47 Ga0209675_1018401 3300025291 Bacteria 1956
48 Ga0209025_1000255 3300025294 Bacteria 125764
49 Ga0209025_1000350 3300025294 Bacteria 99649
50 Ga0209025_1016683 3300025294 Bacteria 4306
51 Ga0209025_1022017 3300025294 Bacteria 3402
52 Ga0209564_1000116 3300025295 Bacteria 207889
53 Ga0209564_1000125 3300025295 Bacteria 201709
54 Ga0209758_1000928 3300025297 Bacteria 39646
55 Ga0209758_1001022 3300025297 Bacteria 36959
56 Ga0209758_1001059 3300025297 Bacteria 35937
57 Ga0209758_1010547 3300025297 Bacteria 5509
58 Ga0209256_1000302 3300025299 Bacteria 86634
59 Ga0209256_1002388 3300025299 Bacteria 15471
60 Ga0209256_1013158 3300025299 Bacteria 3093
61 Ga0209256_1013374 3300025299 Bacteria 3047
62 Ga0207426_1000047 3300025302 Bacteria 417011
63 Ga0207426_1000276 3300025302 Bacteria 106148
64 Ga0209051_1000217 3300025303 Bacteria 97218
65 Ga0209051_1002526 3300025303 Bacteria 12962
66 Ga0209051_1013156 3300025303 Bacteria 3954
67 Ga0209051_1028485 3300025303 Bacteria 2205
68 Ga0209257_1003206 3300025304 Bacteria 14477
69 Ga0209371_1000003 3300027312 Bacteria 1122971
70 Ga0307515_10023117 3300028794 Bacteria 10916
71 Ga0268256_1000004 3300030500 Bacteria 1122967
72 Ga0439465_0009236 3300041413 Bacteria 3107
73 Ga0439465_0017215 3300041413 Bacteria 2255
74 Ga0451835_1132492 3300041492 Bacteria 2229
75 Ga0451837_1782270 3300041494 Bacteria 2214
76 Ga0451839_0642748 3300041496 Bacteria 2311
77 Ga0451847_0178199 3300041503 Bacteria 2474
78 Ga0451849_0065762 3300041505 Bacteria 1502
79 Ga0451851_0079451 3300041507 Bacteria 4320
80 Ga0451851_0392271 3300041507 Bacteria 1467
81 Ga0451843_1437093 3300041509 Bacteria 1627
82 Ga0451853_2166464 3300041512 Bacteria 4021
83 Ga0495617_033060 3300046452 Bacteria 1736
84 Ga0495638_0000309 3300046460 Bacteria 62979
85 Ga0495638_0039391 3300046460 Bacteria 3000
86 Ga0495605_0013359 3300046474 Bacteria 4527
87 Ga0495585_0015523 3300046492 Bacteria 4427
88 Ga0495585_0019955 3300046492 Bacteria 3857
89 Ga0495596_0018032 3300046500 Bacteria 2914
90 Ga0495607_0023731 3300046501 Bacteria 3835
91 Ga0495607_0040310 3300046501 Bacteria 2782
92 Ga0495607_0170947 3300046501 Bacteria 1097
93 Ga0495583_0022754 3300046506 Bacteria 3188
94 Ga0495583_0042948 3300046506 Bacteria 2108
95 Ga0495606_0043642 3300046507 Bacteria 2988
96 Ga0495610_0032112 3300046512 Bacteria 2732
97 Ga0495610_0056637 3300046512 Bacteria 1884
98 Ga0495620_0034753 3300046515 Bacteria 2274
99 Ga0495631_0001992 3300046518 Bacteria 11939
100 Ga0495631_0041421 3300046518 Bacteria 2038
101 Ga0495632_0016998 3300046519 Bacteria 4029
102 Ga0495648_0044806 3300046524 Bacteria 2758
103 Ga0495654_0030651 3300046530 Bacteria 2735
104 Ga0495609_0060764 3300046538 Bacteria 1670
105 Ga0495633_0023286 3300046558 Bacteria 3069
106 Ga0495668_0004512 3300046616 Bacteria 9854
107 Ga0495668_0068792 3300046616 Bacteria 1947
108 Ga0495611_0008730 3300046648 Bacteria 4286
109 Ga0495625_0012205 3300046660 Bacteria 6967
110 Ga0495625_0020055 3300046660 Bacteria 5167
111 Ga0495661_0056137 3300046665 Bacteria 2357
112 Ga0495588_0078242 3300046674 Bacteria 1725
113 Ga0495671_0044649 3300046692 Bacteria 2221
114 Ga0495660_0049477 3300046810 Bacteria 2294
115 Ga0495681_0003433 3300047470 Bacteria 11025
116 Ga0495686_0061721 3300047472 Bacteria 2327
117 Ga0495615_0011449 3300048090 Bacteria 1803
118 Ga0496101_0158468 3300048904 Bacteria 1735
119 Ga0496106_0025280 3300048909 Bacteria 4418
120 Ga0496114_0046860 3300048917 Bacteria 3593
121 Ga0496116_0000471 3300048919 Bacteria 55687
122 Ga0496116_0074541 3300048919 Bacteria 2134
123 Ga0496118_0021751 3300048921 Bacteria 5633
124 Ga0496121_0010198 3300048924 Bacteria 10641
125 Ga0496122_0024660 3300048925 Bacteria 5257
126 Ga0496123_0013082 3300048926 Bacteria 7003
127 Ga0496125_0009728 3300048928 Bacteria 9817
128 Ga0496126_0002372 3300048929 Bacteria 25676
129 Ga0495678_018766 3300049459 Bacteria 3102
130 Ga0501032_0044329 3300049569 Bacteria 3011
131 Ga0501037_0039608 3300049573 Bacteria 3469
132 Ga0501039_0071810 3300049575 Bacteria 2690
133 Ga0501047_0075637 3300049581 Bacteria 3240
134 Ga0501073_0052967 3300049589 Bacteria 2841
135 Ga0501083_0010197 3300049744 Bacteria 6621
136 nmdc:mga03683_13082_c1 3300050489 Bacteria 2747
137 nmdc:mga03n38_44391_c1 3300050490 Bacteria 1952
138 nmdc:mga00v17_346_c1 3300050491 Bacteria 10246
139 nmdc:mga07m45_39372_c1 3300050496 Bacteria 2641
140 Ga0500557_013223 3300053105 Bacteria 2166
141 Ga0500562_028078 3300053108 Bacteria 1478
142 Ga0500569_014130 3300053109 Bacteria 1970
143 Ga0500594_0013186 3300053118 Bacteria 1961
144 Ga0500658_0013452 3300053134 Bacteria 3023
145 Ga0500568_0002138 3300053139 Bacteria 11923
146 Ga0500568_0012197 3300053139 Bacteria 3959
147 Ga0500616_0000980 3300053153 Bacteria 30834
148 Ga0500622_0005999 3300053156 Bacteria 7138
149 Ga0500645_038775 3300053730 Bacteria 1413

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046501 Ga0495607_0170947 Ga0495607_0170947_11_1048 329
2 iso_pu_bacteria 2838686498 2838691482 366
3 iso_pu_bacteria 2838729681 2838733441 366
4 iso_pu_bacteria 2838742623 2838745987 366
5 iso_pu_bacteria 2842156927 2842162294 366
6 iso_pu_bacteria 2842180545 2842185220 366
7 iso_pu_bacteria 2842271015 2842275956 366
8 iso_pu_bacteria 2842304105 2842308060 366
9 iso_pu_bacteria 2842395702 2842398685 392
10 3300046507 Ga0495606_0043642 Ga0495606_0043642_673_1977 402
11 3300048904 Ga0496101_0158468 Ga0496101_0158468_377_1681 402
12 3300025299 Ga0209256_1013158 Ga0209256_10131582 406
13 iso_pu_bacteria 2585427608 2585898793 407
14 3300041507 Ga0451851_0079451 Ga0451851_0079451_1414_2820 410
15 3300006051 Ga0075364_10001689 Ga0075364_100016898 411
16 3300050491 nmdc:mga00v17_346_c1 nmdc:mga00v17_346_c1_1293_2609 411
17 3300046538 Ga0495609_0060764 Ga0495609_0060764_25_1362 412
18 3300025294 Ga0209025_1000255 Ga0209025_100025523 413
19 3300028794 Ga0307515_10023117 Ga0307515_100231176 416
20 3300041494 Ga0451837_1782270 Ga0451837_1782270_783_2189 416
21 3300041505 Ga0451849_0065762 Ga0451849_0065762_11_1417 416
22 3300041512 Ga0451853_2166464 Ga0451853_2166464_2126_3532 416
23 3300046460 Ga0495638_0039391 Ga0495638_0039391_973_2379 416
24 3300046492 Ga0495585_0019955 Ga0495585_0019955_1180_2586 416
25 3300046500 Ga0495596_0018032 Ga0495596_0018032_961_2367 416
26 3300046501 Ga0495607_0040310 Ga0495607_0040310_968_2374 416
27 3300046512 Ga0495610_0056637 Ga0495610_0056637_246_1652 416
28 3300046518 Ga0495631_0041421 Ga0495631_0041421_46_1452 416
29 3300046524 Ga0495648_0044806 Ga0495648_0044806_1207_2613 416
30 3300046530 Ga0495654_0030651 Ga0495654_0030651_947_2353 416
31 3300046558 Ga0495633_0023286 Ga0495633_0023286_1272_2678 416
32 3300046616 Ga0495668_0068792 Ga0495668_0068792_139_1545 416
33 3300046665 Ga0495661_0056137 Ga0495661_0056137_298_1704 416
34 3300046674 Ga0495588_0078242 Ga0495588_0078242_167_1573 416
35 3300046692 Ga0495671_0044649 Ga0495671_0044649_604_2010 416
36 3300048090 Ga0495615_0011449 Ga0495615_0011449_271_1677 416
37 iso_pu_bacteria 2919100787 2919104393 416
38 3300047472 Ga0495686_0061721 Ga0495686_0061721_558_2021 417
39 iso_pu_bacteria 8054558443 8054558477 417
40 3300041492 Ga0451835_1132492 Ga0451835_1132492_798_2204 418
41 3300041496 Ga0451839_0642748 Ga0451839_0642748_111_1517 418
42 3300048917 Ga0496114_0046860 Ga0496114_0046860_262_1566 418
43 3300003856 Ga0058692_1013604 Ga0058692_10136042 422
44 3300027312 Ga0209371_1000003 Ga0209371_1000003741 422
45 3300030500 Ga0268256_1000004 Ga0268256_1000004309 422
46 3300047470 Ga0495681_0003433 Ga0495681_0003433_286_1626 422
47 iso_pu_bacteria 2537561587 2537876458 422
48 iso_pu_bacteria 2599185210 2599604611 422
49 iso_pu_bacteria 2978969890 2978972178 422
50 iso_pu_bacteria 2979100975 2979102274 422
51 iso_pu_bacteria 2984509177 2984509777 422
52 iso_pu_bacteria 2984518228 2984519525 422
53 iso_pu_bacteria 2984537506 2984538116 422
54 iso_pu_bacteria 2984587000 2984590404 422
55 3300003187 JGI25151J46595_10000366 JGI25151J46595_100003668 426
56 3300003354 JGI25160J50197_1005267 JGI25160J50197_10052672 426
57 3300003771 Ga0055526_1001175 Ga0055526_100117516 426
58 3300003775 Ga0055524_1011423 Ga0055524_10114233 426
59 3300003790 Ga0055528_1016492 Ga0055528_10164921 426
60 3300006038 Ga0075365_10059660 Ga0075365_100596602 426
61 3300006048 Ga0075363_100062697 Ga0075363_1000626972 426
62 3300006177 Ga0075362_10006282 Ga0075362_100062824 426
63 3300006178 Ga0075367_10065986 Ga0075367_100659862 426
64 3300006186 Ga0075369_10001597 Ga0075369_100015976 426
65 3300006353 Ga0075370_10002394 Ga0075370_100023942 426
66 3300013102 Ga0157371_10007369 Ga0157371_100073692 426
67 3300025245 Ga0207425_1004533 Ga0207425_10045332 426
68 3300025258 Ga0209129_1003110 Ga0209129_10031103 426
69 3300025273 Ga0209673_1000233 Ga0209673_100023357 426
70 3300025291 Ga0209675_1018401 Ga0209675_10184012 426
71 3300025294 Ga0209025_1000350 Ga0209025_100035035 426
72 3300025295 Ga0209564_1000125 Ga0209564_1000125143 426
73 3300025297 Ga0209758_1001022 Ga0209758_100102220 426
74 3300025299 Ga0209256_1002388 Ga0209256_10023883 426
75 3300025302 Ga0207426_1000276 Ga0207426_100027655 426
76 3300025303 Ga0209051_1013156 Ga0209051_10131562 426
77 3300048919 Ga0496116_0000471 Ga0496116_0000471_23204_24532 426
78 3300048929 Ga0496126_0002372 Ga0496126_0002372_23067_24395 426
79 3300050489 nmdc:mga03683_13082_c1 nmdc:mga03683_13082_c1_1149_2570 426
80 3300050490 nmdc:mga03n38_44391_c1 nmdc:mga03n38_44391_c1_292_1713 426
81 3300050496 nmdc:mga07m45_39372_c1 nmdc:mga07m45_39372_c1_748_2169 426
82 iso_pu_bacteria 2510461076 2510896032 426
83 iso_pu_bacteria 2513237162 2514023430 426
84 iso_pu_bacteria 2515154113 2515634635 426
85 iso_pu_bacteria 2515154114 2515645321 426
86 iso_pu_bacteria 2515154116 2515660875 426
87 iso_pu_bacteria 2517287029 2517410578 426
88 iso_pu_bacteria 2585427528 2585541173 426
89 iso_pu_bacteria 2585427593 2585839936 426
90 iso_pu_bacteria 2643221568 2643858274 426
91 iso_pu_bacteria 2738541333 2739035724 426
92 iso_pu_bacteria 2802429633 2806044711 426
93 iso_pu_bacteria 2802429634 2806052911 426
94 iso_pu_bacteria 2802429635 2806059211 426
95 iso_pu_bacteria 2802429636 2806068126 426
96 iso_pu_bacteria 2802429637 2806074246 426
97 iso_pu_bacteria 2919166419 2919169759 426
98 iso_pu_bacteria 8005570704 8005575097 426
99 iso_pu_bacteria 2643221643 2644241698 427
100 iso_pu_bacteria 2933016740 2933018170 427
101 3300009765 Ga0123341_1000014 Ga0123341_100001410 428
102 3300009766 Ga0123342_1021729 Ga0123342_10217292 428
103 3300046452 Ga0495617_033060 Ga0495617_033060_254_1588 428
104 3300046460 Ga0495638_0000309 Ga0495638_0000309_1139_2473 428
105 3300046474 Ga0495605_0013359 Ga0495605_0013359_1217_2551 428
106 3300046492 Ga0495585_0015523 Ga0495585_0015523_735_2069 428
107 3300046506 Ga0495583_0022754 Ga0495583_0022754_1018_2352 428
108 3300046515 Ga0495620_0034753 Ga0495620_0034753_694_2028 428
109 3300046518 Ga0495631_0001992 Ga0495631_0001992_5194_6528 428
110 3300046519 Ga0495632_0016998 Ga0495632_0016998_309_1643 428
111 3300046616 Ga0495668_0004512 Ga0495668_0004512_1585_2919 428
112 3300046648 Ga0495611_0008730 Ga0495611_0008730_2902_4236 428
113 3300046660 Ga0495625_0012205 Ga0495625_0012205_537_1871 428
114 3300046810 Ga0495660_0049477 Ga0495660_0049477_550_1884 428
115 3300049459 Ga0495678_018766 Ga0495678_018766_1515_2849 428
116 3300049573 Ga0501037_0039608 Ga0501037_0039608_387_1775 428
117 3300049575 Ga0501039_0071810 Ga0501039_0071810_75_1463 428
118 3300053105 Ga0500557_013223 Ga0500557_013223_334_1668 428
119 3300053108 Ga0500562_028078 Ga0500562_028078_48_1382 428
120 3300053109 Ga0500569_014130 Ga0500569_014130_469_1803 428
121 3300053118 Ga0500594_0013186 Ga0500594_0013186_469_1803 428
122 3300053139 Ga0500568_0002138 Ga0500568_0002138_861_2195 428
123 3300053153 Ga0500616_0000980 Ga0500616_0000980_27237_28571 428
124 3300053730 Ga0500645_038775 Ga0500645_038775_54_1388 428
125 iso_pu_bacteria 2509276033 2509447768 428
126 iso_pu_bacteria 2513237146 2513926809 428
127 iso_pu_bacteria 2599185170 2599420698 428
128 iso_pu_bacteria 2791355259 2793313213 428
129 iso_pu_bacteria 2791355265 2793356641 428
130 iso_pu_bacteria 2838035591 2838040628 428
131 iso_pu_bacteria 2838661181 2838664984 428
132 iso_pu_bacteria 8056382006 8056386871 428
133 3300003790 Ga0055528_1015865 Ga0055528_10158652 429
134 3300025273 Ga0209673_1014585 Ga0209673_10145852 429
135 3300025297 Ga0209758_1010547 Ga0209758_10105476 429
136 3300025299 Ga0209256_1013374 Ga0209256_10133742 429
137 3300025303 Ga0209051_1028485 Ga0209051_10284851 429
138 3300041503 Ga0451847_0178199 Ga0451847_0178199_111_1514 429
139 3300041507 Ga0451851_0392271 Ga0451851_0392271_38_1402 429
140 3300046501 Ga0495607_0023731 Ga0495607_0023731_1035_2438 429
141 3300046660 Ga0495625_0020055 Ga0495625_0020055_2343_3746 429
142 3300048909 Ga0496106_0025280 Ga0496106_0025280_2385_3812 429
143 3300053134 Ga0500658_0013452 Ga0500658_0013452_436_1863 429
144 3300053139 Ga0500568_0012197 Ga0500568_0012197_1450_2877 429
145 iso_pu_bacteria 2513237085 2513578482 429
146 iso_pu_bacteria 2515154134 2515743494 429
147 iso_pu_bacteria 2516653085 2517077684 429
148 iso_pu_bacteria 2519899620 2520378265 429
149 iso_pu_bacteria 2585427526 2585529594 429
150 iso_pu_bacteria 2842163707 2842169851 429
151 iso_pu_bacteria 2933570622 2933574509 429
152 iso_pu_bacteria 2935901341 2935907060 429
153 iso_pu_bacteria 8005307578 8005310797 429
154 iso_pu_bacteria 8023680758 8023687714 429
155 3300049581 Ga0501047_0075637 Ga0501047_0075637_459_1868 430
156 3300049589 Ga0501073_0052967 Ga0501073_0052967_664_2073 430
157 iso_pu_bacteria 2718218233 2720621425 430
158 iso_pu_bacteria 8005626139 8005631836 430
159 iso_pu_bacteria 2996893221 2996895885 431
160 iso_pu_bacteria 2516653077 2517037383 434
161 iso_pu_bacteria 8057874678 8057876660 434
162 iso_pu_bacteria 2513237103 2513710587 435
163 iso_pu_bacteria 2513237144 2513908331 435
164 iso_pu_bacteria 2842217011 2842220237 435
165 iso_pu_bacteria 3005409236 3005415645 435
166 3300002773 JGI25152J39213_1006297 JGI25152J39213_10062971 436
167 3300003215 JGI25153J46596_10014469 JGI25153J46596_100144693 436
168 3300003792 Ga0055540_1002904 Ga0055540_10029042 436
169 3300025258 Ga0209129_1002503 Ga0209129_10025035 436
170 3300025273 Ga0209673_1001293 Ga0209673_100129317 436
171 3300025294 Ga0209025_1016683 Ga0209025_10166833 436
172 3300025297 Ga0209758_1000928 Ga0209758_100092824 436
173 3300025303 Ga0209051_1000217 Ga0209051_100021752 436
174 3300025304 Ga0209257_1003206 Ga0209257_10032062 436
175 iso_pu_bacteria 2510065019 2510134681 436
176 iso_pu_bacteria 2718217927 2719387109 436
177 iso_pu_bacteria 2718218423 2721400744 436
178 iso_pu_bacteria 2721755556 2723028066 436
179 iso_pu_bacteria 2721755809 2724039557 436
180 iso_pu_bacteria 2728369352 2730109002 436
181 iso_pu_bacteria 2791355266 2793362899 436
182 iso_pu_bacteria 2791355267 2793370075 436
183 iso_pu_bacteria 2838022645 2838024448 436
184 iso_pu_bacteria 2842198810 2842199991 436
185 iso_pu_bacteria 2936375103 2936380719 436
186 iso_pu_bacteria 3005445848 3005449111 436
187 iso_pu_bacteria 639633055 639649847 436
188 iso_pu_bacteria 8005275841 8005281836 436
189 iso_pu_bacteria 8005289223 8005294448 436
190 iso_pu_bacteria 8005301065 8005306832 436
191 iso_pu_bacteria 8005395548 8005401324 436
192 iso_pu_bacteria 8005688590 8005693470 436
193 iso_pu_bacteria 8005695170 8005700690 436
194 iso_pu_bacteria 8024479707 8024481623 436
195 iso_pu_bacteria 8056375014 8056381427 436
196 3300002773 JGI25152J39213_1005821 JGI25152J39213_10058212 437
197 3300002774 JGI25150J39212_1008554 JGI25150J39212_10085542 437
198 3300003215 JGI25153J46596_10012761 JGI25153J46596_100127612 437
199 3300003771 Ga0055526_1006618 Ga0055526_10066184 437
200 3300003790 Ga0055528_1002040 Ga0055528_10020403 437
201 3300025245 Ga0207425_1005754 Ga0207425_10057543 437
202 3300025258 Ga0209129_1002341 Ga0209129_10023418 437
203 3300025273 Ga0209673_1000060 Ga0209673_100006053 437
204 3300025294 Ga0209025_1022017 Ga0209025_10220172 437
205 3300025295 Ga0209564_1000116 Ga0209564_100011653 437
206 3300025297 Ga0209758_1001059 Ga0209758_100105920 437
207 3300025299 Ga0209256_1000302 Ga0209256_100030249 437
208 3300041413 Ga0439465_0017215 Ga0439465_0017215_445_1926 437
209 3300041509 Ga0451843_1437093 Ga0451843_1437093_134_1591 437
210 3300046506 Ga0495583_0042948 Ga0495583_0042948_639_2042 437
211 3300046512 Ga0495610_0032112 Ga0495610_0032112_390_1793 437
212 3300048919 Ga0496116_0074541 Ga0496116_0074541_401_1804 437
213 3300048921 Ga0496118_0021751 Ga0496118_0021751_1502_2974 437
214 3300048924 Ga0496121_0010198 Ga0496121_0010198_1708_3111 437
215 3300048925 Ga0496122_0024660 Ga0496122_0024660_1427_2830 437
216 3300048926 Ga0496123_0013082 Ga0496123_0013082_1114_2517 437
217 3300048928 Ga0496125_0009728 Ga0496125_0009728_1171_2574 437
218 3300049569 Ga0501032_0044329 Ga0501032_0044329_365_1774 437
219 3300049744 Ga0501083_0010197 Ga0501083_0010197_2729_4138 437
220 3300053156 Ga0500622_0005999 Ga0500622_0005999_3181_4584 437
221 iso_pu_bacteria 2509276021 2509389996 437
222 iso_pu_bacteria 2510917030 2511200439 437
223 iso_pu_bacteria 2513237084 2513573267 437
224 iso_pu_bacteria 2513237093 2513631480 437
225 iso_pu_bacteria 2515075009 2515113772 437
226 iso_pu_bacteria 2529292951 2530646799 437
227 iso_pu_bacteria 2615840624 2616295404 437
228 iso_pu_bacteria 2718217882 2719182453 437
229 iso_pu_bacteria 2718217997 2719666755 437
230 iso_pu_bacteria 2718218009 2719733172 437
231 iso_pu_bacteria 2718218199 2720493175 437
232 iso_pu_bacteria 2718218232 2720614652 437
233 iso_pu_bacteria 2718218235 2720632753 437
234 iso_pu_bacteria 2718218269 2720776477 437
235 iso_pu_bacteria 2718218363 2721148566 437
236 iso_pu_bacteria 2718218365 2721159951 437
237 iso_pu_bacteria 2718218366 2721165380 437
238 iso_pu_bacteria 2721755514 2722841550 437
239 iso_pu_bacteria 2721755684 2723561696 437
240 iso_pu_bacteria 2721755685 2723568325 437
241 iso_pu_bacteria 2721755810 2724045928 437
242 iso_pu_bacteria 2721755819 2724091084 437
243 iso_pu_bacteria 2721755822 2724105590 437
244 iso_pu_bacteria 2721755823 2724111416 437
245 iso_pu_bacteria 2724679232 2725947668 437
246 iso_pu_bacteria 2728369365 2730165688 437
247 iso_pu_bacteria 2728369397 2730299583 437
248 iso_pu_bacteria 2765235942 2766065486 437
249 iso_pu_bacteria 2791355256 2793293796 437
250 iso_pu_bacteria 2791355260 2793319873 437
251 iso_pu_bacteria 2791355261 2793328123 437
252 iso_pu_bacteria 2791355262 2793333219 437
253 iso_pu_bacteria 2791355264 2793347223 437
254 iso_pu_bacteria 2802429605 2805930691 437
255 iso_pu_bacteria 2802429606 2805934163 437
256 iso_pu_bacteria 2838016132 2838018952 437
257 iso_pu_bacteria 2838048938 2838051332 437
258 iso_pu_bacteria 2838061910 2838063690 437
259 iso_pu_bacteria 2838068647 2838074261 437
260 iso_pu_bacteria 2838668709 2838671305 437
261 iso_pu_bacteria 2838701080 2838703514 437
262 iso_pu_bacteria 2841864319 2841868338 437
263 iso_pu_bacteria 2842110456 2842113601 437
264 iso_pu_bacteria 2842146304 2842149484 437
265 iso_pu_bacteria 2842192696 2842197748 437
266 iso_pu_bacteria 2842205361 2842208150 437
267 iso_pu_bacteria 2842250916 2842253878 437
268 iso_pu_bacteria 2842264693 2842266458 437
269 iso_pu_bacteria 2842278818 2842281841 437
270 iso_pu_bacteria 2842285085 2842288945 437
271 iso_pu_bacteria 2842311132 2842316151 437
272 iso_pu_bacteria 2842317721 2842321558 437
273 iso_pu_bacteria 2842341865 2842344840 437
274 iso_pu_bacteria 2842402390 2842406388 437
275 iso_pu_bacteria 2842409023 2842413185 437
276 iso_pu_bacteria 2842415677 2842419828 437
277 iso_pu_bacteria 2842422224 2842427885 437
278 iso_pu_bacteria 2842428310 2842429777 437
279 iso_pu_bacteria 2842434925 2842436563 437
280 iso_pu_bacteria 2842441272 2842446800 437
281 iso_pu_bacteria 2842447887 2842450873 437
282 iso_pu_bacteria 2842462802 2842464198 437
283 iso_pu_bacteria 2842469257 2842470892 437
284 iso_pu_bacteria 2842489311 2842493107 437
285 iso_pu_bacteria 2842495871 2842499324 437
286 iso_pu_bacteria 2857516855 2857519068 437
287 iso_pu_bacteria 2933586486 2933589109 437
288 iso_pu_bacteria 2933599457 2933604716 437
289 iso_pu_bacteria 2936367885 2936375029 437
290 iso_pu_bacteria 2936381700 2936382111 437
291 iso_pu_bacteria 8005282627 8005288831 437
292 iso_pu_bacteria 8005376324 8005378352 437
293 iso_pu_bacteria 8005382845 8005385701 437
294 iso_pu_bacteria 8005430974 8005434278 437
295 iso_pu_bacteria 8005460587 8005464459 437
296 iso_pu_bacteria 8005497431 8005501502 437
297 iso_pu_bacteria 8005556819 8005558543 437
298 iso_pu_bacteria 8005619151 8005622864 437
299 iso_pu_bacteria 8005668836 8005672923 437
300 iso_pu_bacteria 8018127388 8018133769 437
301 iso_pu_bacteria 8018176218 8018178618 437
302 iso_pu_bacteria 8024501048 8024506109 437
303 3300002739 JGI25158J39367_1000176 JGI25158J39367_100017610 438
304 3300002773 JGI25152J39213_1006138 JGI25152J39213_10061382 438
305 3300002987 JGI25159J45721_1000724 JGI25159J45721_10007244 438
306 3300003215 JGI25153J46596_10015390 JGI25153J46596_100153903 438
307 3300003354 JGI25160J50197_1004283 JGI25160J50197_10042831 438
308 3300003374 JGI25161J50226_1000104 JGI25161J50226_100010445 438
309 3300003792 Ga0055540_1004735 Ga0055540_10047356 438
310 3300004625 Ga0055543_1000280 Ga0055543_100028031 438
311 3300005262 Ga0065165_1005059 Ga0065165_10050593 438
312 3300025208 Ga0209436_100023 Ga0209436_10002368 438
313 3300025208 Ga0209436_100027 Ga0209436_10002750 438
314 3300025284 Ga0209130_1000173 Ga0209130_100017364 438
315 3300025302 Ga0207426_1000047 Ga0207426_100004764 438
316 3300025303 Ga0209051_1002526 Ga0209051_100252612 438
317 3300041413 Ga0439465_0009236 Ga0439465_0009236_51_1385 438
318 iso_pu_bacteria 2517093000 2517096482 438
319 iso_pu_bacteria 2791355263 2793343834 438
320 iso_pu_bacteria 2838042994 2838046405 438
321 iso_pu_bacteria 2935894831 2935899891 438
322 iso_pu_bacteria 8005563573 8005566613 438
323 iso_pu_bacteria 8018163183 8018170056 438

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01171

ATP_bind_3

PP-loop family

20

202

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6scy-assembly1.cif.gz_A u34-trna thiolase ncsa from methanococcus maripaludis with its [4fe-4s] cluster 0.8005 4 217
6scy-assembly1.cif.gz_B u34-trna thiolase ncsa from methanococcus maripaludis with its [4fe-4s] cluster 0.7741 4 217
5ztb-assembly2.cif.gz_A structure of sulfurtransferase 0.7679 4 212
5mko-assembly1.cif.gz_A [2fe-2s] cluster containing ttua in complex with amp. 0.7617 4 212
5mkq-assembly1.cif.gz_B ttua enzyme containing a [4fe-4s] 0.7606 4 217
ID Description Score Start End Superfamily
af_Q10441_8_228_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8818 17 207 3.40.50.620
af_P9WG53_6_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8766 4 206 3.40.50.620
af_K7LES9_77_324_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8625 17 217 3.40.50.620
af_A0A1D6HL54_20_239_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8431 4 176 3.40.50.620
af_P9WG53_6_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8389 4 206 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A6P0DT17-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9572 1 191 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A2D8K304-F1-model_v4 tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase) 0.926 4 432 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A6P0DT17-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9242 1 191 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A7U3BTG0-F1-model_v4 deleted 0.9187 1 429
AF-A0A259IQK0-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9165 4 211 GO:0005524
GO:0005737
GO:0006400
GO:0032267

Feature Viewer

pLDDT pTM Quality
87.79 0.86 High
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Predicted Structure (AlphaFold2)

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