F402239

General Info

Members Datasets Scaffolds Average Seq Length
313 184 626 299

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10017548|Ga0265316_100175487
Length 348
Sequence MRVVHWRGSVGAAGSSCRESAPTQETVHAGSTWGRESRMKTLCLAVTLILPLAAREPLAQRIVHADPSKYQPSKAVHNGPGQLDYMALFDAHSLDTNLFFLHRGVIQPKSGIGAHFHNQCEEMFVILDGEAQFTVDGRTSLLKGPAGAPCRMGHSHAIYNATDKVIQWMNINVSAMKGTYDAFNLDDPRVDAPLDPIPVFMAMRLERGLLRPVNGMNGGKGTVQYRRALDTSVFLGPWAYVDHLVLPPGTSTGPHLHREVAEFYYVMNGQGAVTISAGAPSRGGGGSSETAQIQAGDAIPIQLGEVHSFENTGNEPLEFMIVGVSRDATRRVDTVDTLNLFPRGGRGN

Samples

Sample ID Description Type Environment
1 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
110 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
111 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
112 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
113 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
114 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
115 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
116 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
117 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
122 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
123 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
125 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
126 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
131 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
132 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
133 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
139 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
144 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
147 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
148 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
149 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
168 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
169 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.68
Metatranscriptomes 0
Isolates 0.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.28
Rhizosphere 97.44
Stem 0
Stem Tuber 0
Unclassified 20.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265316_10017548 3300031344 Bacteria 6180
2 Ga0070658_10010261 3300005327 Bacteria 7510
3 Ga0070658_10254401 3300005327 Unclassified 1490
4 Ga0070683_100000487 3300005329 Bacteria 28009
5 Ga0070683_100022658 3300005329 Bacteria 5616
6 Ga0068869_100088981 3300005334 Bacteria 2318
7 Ga0068869_100348481 3300005334 Bacteria 1207
8 Ga0070666_10176018 3300005335 Unclassified 1500
9 Ga0070680_100029720 3300005336 Bacteria 4387
10 Ga0068868_100538791 3300005338 Bacteria 1027
11 Ga0070660_100007832 3300005339 Bacteria 7450
12 Ga0070689_100131686 3300005340 Unclassified 2005
13 Ga0070661_100146970 3300005344 Unclassified 1780
14 Ga0070675_100260925 3300005354 Unclassified 1518
15 Ga0070673_100022432 3300005364 Bacteria 4595
16 Ga0070688_100009572 3300005365 Bacteria 5307
17 Ga0070688_100095645 3300005365 Bacteria 1950
18 Ga0070688_100109751 3300005365 Bacteria 1833
19 Ga0070688_100249272 3300005365 Unclassified 1264
20 Ga0070667_100069878 3300005367 Unclassified 2989
21 Ga0070714_100000239 3300005435 Bacteria 42937
22 Ga0070713_100013762 3300005436 Bacteria 5984
23 Ga0070681_10001133 3300005458 Bacteria 22913
24 Ga0068867_100028509 3300005459 Bacteria 4021
25 Ga0070685_10082596 3300005466 Bacteria 1929
26 Ga0070679_100003486 3300005530 Bacteria 14402
27 Ga0070684_100000452 3300005535 Bacteria 28009
28 Ga0070684_100026141 3300005535 Unclassified 4915
29 Ga0070684_100219833 3300005535 Bacteria 1733
30 Ga0070672_100061225 3300005543 Bacteria 2966
31 Ga0070686_100181073 3300005544 Unclassified 1497
32 Ga0070696_100001684 3300005546 Bacteria 14483
33 Ga0070665_100066843 3300005548 Bacteria 3606
34 Ga0070665_100325907 3300005548 Bacteria 1540
35 Ga0070665_100496896 3300005548 Unclassified 1231
36 Ga0068855_100004820 3300005563 Bacteria 16473
37 Ga0068855_100010082 3300005563 Bacteria 11387
38 Ga0068855_100501906 3300005563 Bacteria 1318
39 Ga0068857_100090243 3300005577 Bacteria 2742
40 Ga0068856_100021786 3300005614 Bacteria 6228
41 Ga0068856_100040926 3300005614 Bacteria 4552
42 Ga0068859_100022758 3300005617 Bacteria 6284
43 Ga0068859_100093252 3300005617 Bacteria 3063
44 Ga0068859_100127702 3300005617 Unclassified 2613
45 Ga0068864_100232718 3300005618 Unclassified 1705
46 Ga0068870_10037597 3300005840 Bacteria 2496
47 Ga0068863_100008877 3300005841 Bacteria 9815
48 Ga0068860_100024305 3300005843 Bacteria 5856
49 Ga0068860_100078255 3300005843 Bacteria 3145
50 Ga0068860_100124797 3300005843 Bacteria 2467
51 Ga0068860_100321155 3300005843 Bacteria 1520
52 Ga0068862_100021950 3300005844 Bacteria 5339
53 Ga0081455_10030264 3300005937 Bacteria 4920
54 Ga0070712_100214734 3300006175 Bacteria 1519
55 Ga0097621_100113707 3300006237 Bacteria 2289
56 Ga0068871_100026508 3300006358 Bacteria 4523
57 Ga0068871_100089767 3300006358 Bacteria 2559
58 Ga0075428_100023296 3300006844 Bacteria 6851
59 Ga0075428_100322242 3300006844 Bacteria 1660
60 Ga0075430_100020682 3300006846 Bacteria 5598
61 Ga0075431_100006882 3300006847 Bacteria 11299
62 Ga0075431_100151874 3300006847 Unclassified 2384
63 Ga0075431_100471901 3300006847 Bacteria 1248
64 Ga0075433_10160544 3300006852 Bacteria 2000
65 Ga0075429_100347811 3300006880 Unclassified 1298
66 Ga0068865_100125632 3300006881 Bacteria 1914
67 Ga0097620_100022758 3300006931 Bacteria 6284
68 Ga0097620_100093253 3300006931 Bacteria 3063
69 Ga0097620_100127699 3300006931 Unclassified 2613
70 Ga0105240_10024431 3300009093 Bacteria 7962
71 Ga0105240_10074308 3300009093 Bacteria 4196
72 Ga0111539_10009241 3300009094 Bacteria 12459
73 Ga0111539_10116780 3300009094 Unclassified 3128
74 Ga0105245_10022645 3300009098 Bacteria 5516
75 Ga0105245_10030207 3300009098 Bacteria 4792
76 Ga0114129_10061026 3300009147 Bacteria 5270
77 Ga0114129_10088576 3300009147 Bacteria 4291
78 Ga0114129_10240468 3300009147 Unclassified 2434
79 Ga0114129_10608657 3300009147 Bacteria 1415
80 Ga0114129_10703656 3300009147 Bacteria 1298
81 Ga0105241_10617952 3300009174 Unclassified 981
82 Ga0105242_10220506 3300009176 Bacteria 1695
83 Ga0105248_10442187 3300009177 Unclassified 1465
84 Ga0105248_10659010 3300009177 Bacteria 1181
85 Ga0105237_10007866 3300009545 Bacteria 11621
86 Ga0105237_10008471 3300009545 Bacteria 11127
87 Ga0105237_10020148 3300009545 Bacteria 6884
88 Ga0105237_10190321 3300009545 Unclassified 2052
89 Ga0105238_10003812 3300009551 Bacteria 14977
90 Ga0105238_10225787 3300009551 Bacteria 1849
91 Ga0105238_10390015 3300009551 Bacteria 1385
92 Ga0105249_10233651 3300009553 Bacteria 1814
93 Ga0105249_10268270 3300009553 Bacteria 1699
94 Ga0105249_10305223 3300009553 Bacteria 1598
95 Ga0105239_10011459 3300010375 Bacteria 9887
96 Ga0105239_10020420 3300010375 Bacteria 7307
97 Ga0105239_10147200 3300010375 Bacteria 2628
98 Ga0105239_10633621 3300010375 Bacteria 1220
99 Ga0105246_10151477 3300011119 Bacteria 1756
100 Ga0157371_10047252 3300013102 Bacteria 3060
101 Ga0157371_10091709 3300013102 Bacteria 2152
102 Ga0157370_10011022 3300013104 Bacteria 9483
103 Ga0157370_10398626 3300013104 Unclassified 1267
104 Ga0157370_10399649 3300013104 Unclassified 1265
105 Ga0157369_10000921 3300013105 Bacteria 37496
106 Ga0157369_10034642 3300013105 Bacteria 5539
107 Ga0157369_10035639 3300013105 Bacteria 5454
108 Ga0157369_10064975 3300013105 Unclassified 3929
109 Ga0157369_10290882 3300013105 Bacteria 1701
110 Ga0157369_10521557 3300013105 Bacteria 1229
111 Ga0157374_10014916 3300013296 Bacteria 6810
112 Ga0157374_10156902 3300013296 Unclassified 2215
113 Ga0157374_10182895 3300013296 Bacteria 2048
114 Ga0157378_10392229 3300013297 Unclassified 1366
115 Ga0163162_10382560 3300013306 Unclassified 1540
116 Ga0163162_10838565 3300013306 Bacteria 1035
117 Ga0157372_10001307 3300013307 Bacteria 26947
118 Ga0157372_10082420 3300013307 Bacteria 3642
119 Ga0157372_10145452 3300013307 Bacteria 2733
120 Ga0157375_10275328 3300013308 Unclassified 1845
121 Ga0163163_10025468 3300014325 Bacteria 5640
122 Ga0163163_10102164 3300014325 Unclassified 2890
123 Ga0163163_10626190 3300014325 Unclassified 1139
124 Ga0157380_10235431 3300014326 Bacteria 1647
125 Ga0157379_10008745 3300014968 Bacteria 8825
126 Ga0157376_10086158 3300014969 Unclassified 2708
127 Ga0157376_10371238 3300014969 Bacteria 1375
128 Ga0213875_10111916 3300021388 Bacteria 1275
129 Ga0207680_10027993 3300025903 Bacteria 3147
130 Ga0207647_10020726 3300025904 Bacteria 4404
131 Ga0207699_10005822 3300025906 Bacteria 5931
132 Ga0207643_10122082 3300025908 Bacteria 1544
133 Ga0207705_10142098 3300025909 Unclassified 1793
134 Ga0207705_10476366 3300025909 Unclassified 969
135 Ga0207695_10022775 3300025913 Bacteria 7098
136 Ga0207695_10060994 3300025913 Bacteria 3900
137 Ga0207671_10012723 3300025914 Bacteria 6749
138 Ga0207671_10013779 3300025914 Bacteria 6419
139 Ga0207693_10213375 3300025915 Bacteria 1517
140 Ga0207660_10025664 3300025917 Bacteria 4003
141 Ga0207657_10004653 3300025919 Bacteria 14498
142 Ga0207657_10008623 3300025919 Bacteria 10321
143 Ga0207657_10149814 3300025919 Bacteria 1901
144 Ga0207681_10048653 3300025923 Bacteria 2863
145 Ga0207681_10390979 3300025923 Bacteria 1121
146 Ga0207694_10002520 3300025924 Bacteria 14879
147 Ga0207687_10006977 3300025927 Bacteria 7441
148 Ga0207687_10010297 3300025927 Bacteria 6110
149 Ga0207687_10406933 3300025927 Bacteria 1120
150 Ga0207700_10033483 3300025928 Bacteria 3677
151 Ga0207664_10014079 3300025929 Bacteria 5767
152 Ga0207644_10053731 3300025931 Bacteria 2900
153 Ga0207644_10389600 3300025931 Bacteria 1137
154 Ga0207686_10042441 3300025934 Bacteria 2781
155 Ga0207686_10176133 3300025934 Unclassified 1513
156 Ga0207686_10219208 3300025934 Bacteria 1373
157 Ga0207709_10054112 3300025935 Bacteria 2473
158 Ga0207709_10200626 3300025935 Bacteria 1424
159 Ga0207670_10133910 3300025936 Unclassified 1820
160 Ga0207670_10134351 3300025936 Bacteria 1817
161 Ga0207704_10074823 3300025938 Bacteria 2163
162 Ga0207691_10012215 3300025940 Bacteria 8232
163 Ga0207691_10298785 3300025940 Bacteria 1383
164 Ga0207711_10081109 3300025941 Bacteria 2834
165 Ga0207689_10072087 3300025942 Bacteria 2838
166 Ga0207661_10000051 3300025944 Bacteria 92442
167 Ga0207661_10018352 3300025944 Bacteria 5198
168 Ga0207667_10000332 3300025949 Bacteria 64962
169 Ga0207667_10012493 3300025949 Bacteria 9776
170 Ga0207651_10013238 3300025960 Bacteria 4711
171 Ga0207651_10120360 3300025960 Bacteria 1990
172 Ga0207712_10349205 3300025961 Bacteria 1229
173 Ga0207639_10070146 3300026041 Bacteria 2737
174 Ga0207702_10008251 3300026078 Bacteria 8803
175 Ga0207702_10033875 3300026078 Bacteria 4268
176 Ga0207641_10000605 3300026088 Bacteria 39451
177 Ga0207641_10033886 3300026088 Bacteria 4245
178 Ga0207641_10045105 3300026088 Bacteria 3711
179 Ga0207641_10050984 3300026088 Bacteria 3504
180 Ga0207648_10042676 3300026089 Bacteria 3981
181 Ga0207676_10131184 3300026095 Bacteria 2131
182 Ga0207676_10474090 3300026095 Unclassified 1184
183 Ga0207674_10159304 3300026116 Bacteria 2212
184 Ga0207675_100703382 3300026118 Unclassified 1020
185 Ga0268266_10415503 3300028379 Bacteria 1274
186 Ga0268264_10037886 3300028381 Bacteria 3977
187 Ga0268264_10178699 3300028381 Bacteria 1925
188 Ga0268264_10193364 3300028381 Bacteria 1856
189 Ga0265318_10012444 3300028577 Unclassified 3623
190 Ga0265338_10010941 3300028800 Bacteria 10546
191 Ga0265338_10019952 3300028800 Bacteria 7077
192 Ga0265338_10174509 3300028800 Unclassified 1644
193 Ga0265324_10045823 3300029957 Bacteria 1506
194 Ga0265330_10001307 3300031235 Bacteria 14553
195 Ga0265330_10011246 3300031235 Unclassified 4202
196 Ga0265332_10028422 3300031238 Unclassified 2448
197 Ga0265320_10030827 3300031240 Unclassified 2761
198 Ga0265325_10000197 3300031241 Bacteria 43020
199 Ga0265325_10004002 3300031241 Bacteria 9415
200 Ga0265329_10007253 3300031242 Unclassified 4306
201 Ga0265340_10004821 3300031247 Bacteria 7507
202 Ga0265340_10101577 3300031247 Unclassified 1336
203 Ga0265339_10004863 3300031249 Bacteria 9070
204 Ga0265339_10005972 3300031249 Bacteria 8049
205 Ga0265331_10010610 3300031250 Bacteria 5087
206 Ga0265316_10006398 3300031344 Bacteria 11254
207 Ga0265316_10019808 3300031344 Bacteria 5745
208 Ga0307408_100241472 3300031548 Unclassified 1485
209 Ga0265313_10001108 3300031595 Bacteria 25762
210 Ga0265313_10048738 3300031595 Unclassified 2042
211 Ga0265314_10000028 3300031711 Bacteria 278016
212 Ga0265314_10017094 3300031711 Bacteria 5702
213 Ga0265342_10001366 3300031712 Bacteria 22832
214 Ga0265342_10006851 3300031712 Bacteria 8422
215 Ga0373949_0023581 3300035090 Bacteria 1426
216 Ga0373936_0057781 3300035113 Unclassified 1578
217 Ga0373943_0154520 3300035170 Unclassified 1245
218 Ga0373955_0350802 3300035172 Bacteria 894
219 Ga0373927_0000194 3300035695 Bacteria 48820
220 Ga0373947_0002668 3300035725 Bacteria 10724
221 Ga0373947_0112530 3300035725 Bacteria 1722
222 Ga0373925_0000698 3300037068 Bacteria 31435
223 Ga0373925_0024394 3300037068 Bacteria 4416
224 Ga0373925_0094782 3300037068 Unclassified 2286
225 Ga0436364_0724552 3300037853 Bacteria 4022
226 Ga0436364_1230042 3300037853 Bacteria 1681
227 Ga0436363_0649214 3300039450 Bacteria 1155
228 Ga0436362_0311751 3300039453 Bacteria 1228
229 Ga0466966_0046967 3300044684 Unclassified 2755
230 Ga0466970_0161420 3300044765 Bacteria 1240
231 Ga0466959_0125659 3300045049 Bacteria 1821
232 Ga0451576_0157574 3300045051 Bacteria 2369
233 Ga0451576_0393415 3300045051 Unclassified 1453
234 Ga0466967_0630863 3300045976 Unclassified 1059
235 Ga0495580_0059577 3300046472 Unclassified 2683
236 Ga0495580_0087153 3300046472 Unclassified 2175
237 Ga0495580_0194302 3300046472 Bacteria 1399
238 Ga0495580_0214286 3300046472 Bacteria 1324
239 Ga0495582_0124999 3300046473 Bacteria 1451
240 Ga0495664_0022532 3300046477 Bacteria 3652
241 Ga0495664_0022779 3300046477 Bacteria 3634
242 Ga0495664_0029835 3300046477 Unclassified 3193
243 Ga0495608_0191299 3300046511 Unclassified 1292
244 Ga0495618_0298867 3300046514 Archaea 1001
245 Ga0495628_0053075 3300046516 Bacteria 3201
246 Ga0495666_0039066 3300046526 Unclassified 2306
247 Ga0495640_0121226 3300046533 Bacteria 1700
248 Ga0495645_0139586 3300046543 Bacteria 1692
249 Ga0495667_0067295 3300046559 Bacteria 2341
250 Ga0495667_0088517 3300046559 Bacteria 2007
251 Ga0495667_0223378 3300046559 Unclassified 1202
252 Ga0495634_0031900 3300046642 Bacteria 3627
253 Ga0495635_0018702 3300046663 Bacteria 4833
254 Ga0495623_0007596 3300046679 Bacteria 7040
255 Ga0495623_0134524 3300046679 Unclassified 1476
256 Ga0495604_0106176 3300047317 Bacteria 2055
257 Ga0495604_0110808 3300047317 Unclassified 2002
258 Ga0495674_0009319 3300047319 Bacteria 9333
259 Ga0495674_0034809 3300047319 Bacteria 4551
260 Ga0495674_0081526 3300047319 Bacteria 2775
261 Ga0495675_0091247 3300047444 Bacteria 1912
262 Ga0495684_0001378 3300047471 Bacteria 19511
263 Ga0495684_0013877 3300047471 Bacteria 6197
264 Ga0495684_0035713 3300047471 Bacteria 3811
265 Ga0495602_0398458 3300048088 Bacteria 982
266 Ga0496102_0409481 3300048905 Bacteria 1274
267 Ga0496104_0665242 3300048907 Bacteria 950
268 Ga0496110_0164640 3300048913 Bacteria 2011
269 Ga0496115_0120801 3300048918 Unclassified 2156
270 Ga0501031_0025786 3300049568 Bacteria 3835
271 Ga0501033_0017136 3300049570 Bacteria 5476
272 Ga0501034_0006509 3300049571 Bacteria 12562
273 Ga0501034_0049536 3300049571 Bacteria 4238
274 Ga0501034_0125825 3300049571 Bacteria 2548
275 Ga0501036_0323880 3300049572 Bacteria 1287
276 Ga0501038_0024916 3300049574 Bacteria 5332
277 Ga0501043_0015650 3300049579 Bacteria 5945
278 Ga0501043_0019753 3300049579 Bacteria 5291
279 Ga0501046_0009304 3300049580 Bacteria 8507
280 Ga0501047_0100657 3300049581 Bacteria 2769
281 Ga0501067_0035902 3300049583 Bacteria 2752
282 Ga0501068_0121834 3300049584 Bacteria 1626
283 Ga0501070_0169276 3300049586 Bacteria 1800
284 Ga0501073_0060001 3300049589 Unclassified 2655
285 Ga0501073_0122478 3300049589 Bacteria 1802
286 Ga0501073_0134500 3300049589 Bacteria 1713
287 Ga0501073_0151491 3300049589 Bacteria 1607
288 Ga0501073_0223924 3300049589 Bacteria 1299
289 Ga0501074_0259780 3300049590 Unclassified 1235
290 Ga0501080_0017535 3300049742 Bacteria 6621
291 Ga0501080_0146004 3300049742 Bacteria 2186
292 Ga0501083_0001112 3300049744 Bacteria 18010
293 Ga0501083_0046229 3300049744 Bacteria 2943
294 Ga0501035_0197997 3300049822 Bacteria 1724
295 Ga0501044_0016229 3300049823 Bacteria 8005
296 nmdc:mga05p37_10433_c1 3300050507 Bacteria 11026
297 nmdc:mga05p37_140060_c1 3300050507 Unclassified 2964
298 nmdc:mga05p37_187497_c1 3300050507 Bacteria 2514
299 nmdc:mga05p37_35701_c1 3300050507 Bacteria 6097
300 nmdc:mga0qj67_117802_c1 3300050509 Bacteria 2147
301 nmdc:mga0qj67_76461_c1 3300050509 Unclassified 2678
302 nmdc:mga06r32_2671_c1 3300050510 Bacteria 15945
303 nmdc:mga06r32_34620_c1 3300050510 Unclassified 4764
304 nmdc:mga06r32_453622_c1 3300050510 Bacteria 1262
305 nmdc:mga08y16_32303_c1 3300050511 Bacteria 5503
306 nmdc:mga0n895_365124_c1 3300050512 Bacteria 1462
307 nmdc:mga0a205_321554_c1 3300050515 Bacteria 1418
308 Ga0501084_0142789 3300054114 Bacteria 2016
309 Ga0501084_0213391 3300054114 Bacteria 1628
310 Ga0501082_0005683 3300060353 Bacteria 10820
311 Ga0501082_0011171 3300060353 Bacteria 7717
312 Ga0501082_0187557 3300060353 Bacteria 1799
313 2884219238 2884215851 Bacteria 4554841
314 Ga0265316_10017548
315 Ga0070658_10010261
316 Ga0070658_10254401
317 Ga0070683_100000487
318 Ga0070683_100022658
319 Ga0068869_100088981
320 Ga0068869_100348481
321 Ga0070666_10176018
322 Ga0070680_100029720
323 Ga0068868_100538791
324 Ga0070660_100007832
325 Ga0070689_100131686
326 Ga0070661_100146970
327 Ga0070675_100260925
328 Ga0070673_100022432
329 Ga0070688_100009572
330 Ga0070688_100095645
331 Ga0070688_100109751
332 Ga0070688_100249272
333 Ga0070667_100069878
334 Ga0070714_100000239
335 Ga0070713_100013762
336 Ga0070681_10001133
337 Ga0068867_100028509
338 Ga0070685_10082596
339 Ga0070679_100003486
340 Ga0070684_100000452
341 Ga0070684_100026141
342 Ga0070684_100219833
343 Ga0070672_100061225
344 Ga0070686_100181073
345 Ga0070696_100001684
346 Ga0070665_100066843
347 Ga0070665_100325907
348 Ga0070665_100496896
349 Ga0068855_100004820
350 Ga0068855_100010082
351 Ga0068855_100501906
352 Ga0068857_100090243
353 Ga0068856_100021786
354 Ga0068856_100040926
355 Ga0068859_100022758
356 Ga0068859_100093252
357 Ga0068859_100127702
358 Ga0068864_100232718
359 Ga0068870_10037597
360 Ga0068863_100008877
361 Ga0068860_100024305
362 Ga0068860_100078255
363 Ga0068860_100124797
364 Ga0068860_100321155
365 Ga0068862_100021950
366 Ga0081455_10030264
367 Ga0070712_100214734
368 Ga0097621_100113707
369 Ga0068871_100026508
370 Ga0068871_100089767
371 Ga0075428_100023296
372 Ga0075428_100322242
373 Ga0075430_100020682
374 Ga0075431_100006882
375 Ga0075431_100151874
376 Ga0075431_100471901
377 Ga0075433_10160544
378 Ga0075429_100347811
379 Ga0068865_100125632
380 Ga0097620_100022758
381 Ga0097620_100093253
382 Ga0097620_100127699
383 Ga0105240_10024431
384 Ga0105240_10074308
385 Ga0111539_10009241
386 Ga0111539_10116780
387 Ga0105245_10022645
388 Ga0105245_10030207
389 Ga0114129_10061026
390 Ga0114129_10088576
391 Ga0114129_10240468
392 Ga0114129_10608657
393 Ga0114129_10703656
394 Ga0105241_10617952
395 Ga0105242_10220506
396 Ga0105248_10442187
397 Ga0105248_10659010
398 Ga0105237_10007866
399 Ga0105237_10008471
400 Ga0105237_10020148
401 Ga0105237_10190321
402 Ga0105238_10003812
403 Ga0105238_10225787
404 Ga0105238_10390015
405 Ga0105249_10233651
406 Ga0105249_10268270
407 Ga0105249_10305223
408 Ga0105239_10011459
409 Ga0105239_10020420
410 Ga0105239_10147200
411 Ga0105239_10633621
412 Ga0105246_10151477
413 Ga0157371_10047252
414 Ga0157371_10091709
415 Ga0157370_10011022
416 Ga0157370_10398626
417 Ga0157370_10399649
418 Ga0157369_10000921
419 Ga0157369_10034642
420 Ga0157369_10035639
421 Ga0157369_10064975
422 Ga0157369_10290882
423 Ga0157369_10521557
424 Ga0157374_10014916
425 Ga0157374_10156902
426 Ga0157374_10182895
427 Ga0157378_10392229
428 Ga0163162_10382560
429 Ga0163162_10838565
430 Ga0157372_10001307
431 Ga0157372_10082420
432 Ga0157372_10145452
433 Ga0157375_10275328
434 Ga0163163_10025468
435 Ga0163163_10102164
436 Ga0163163_10626190
437 Ga0157380_10235431
438 Ga0157379_10008745
439 Ga0157376_10086158
440 Ga0157376_10371238
441 Ga0213875_10111916
442 Ga0207680_10027993
443 Ga0207647_10020726
444 Ga0207699_10005822
445 Ga0207643_10122082
446 Ga0207705_10142098
447 Ga0207705_10476366
448 Ga0207695_10022775
449 Ga0207695_10060994
450 Ga0207671_10012723
451 Ga0207671_10013779
452 Ga0207693_10213375
453 Ga0207660_10025664
454 Ga0207657_10004653
455 Ga0207657_10008623
456 Ga0207657_10149814
457 Ga0207681_10048653
458 Ga0207681_10390979
459 Ga0207694_10002520
460 Ga0207687_10006977
461 Ga0207687_10010297
462 Ga0207687_10406933
463 Ga0207700_10033483
464 Ga0207664_10014079
465 Ga0207644_10053731
466 Ga0207644_10389600
467 Ga0207686_10042441
468 Ga0207686_10176133
469 Ga0207686_10219208
470 Ga0207709_10054112
471 Ga0207709_10200626
472 Ga0207670_10133910
473 Ga0207670_10134351
474 Ga0207704_10074823
475 Ga0207691_10012215
476 Ga0207691_10298785
477 Ga0207711_10081109
478 Ga0207689_10072087
479 Ga0207661_10000051
480 Ga0207661_10018352
481 Ga0207667_10000332
482 Ga0207667_10012493
483 Ga0207651_10013238
484 Ga0207651_10120360
485 Ga0207712_10349205
486 Ga0207639_10070146
487 Ga0207702_10008251
488 Ga0207702_10033875
489 Ga0207641_10000605
490 Ga0207641_10033886
491 Ga0207641_10045105
492 Ga0207641_10050984
493 Ga0207648_10042676
494 Ga0207676_10131184
495 Ga0207676_10474090
496 Ga0207674_10159304
497 Ga0207675_100703382
498 Ga0268266_10415503
499 Ga0268264_10037886
500 Ga0268264_10178699
501 Ga0268264_10193364
502 Ga0265318_10012444
503 Ga0265338_10010941
504 Ga0265338_10019952
505 Ga0265338_10174509
506 Ga0265324_10045823
507 Ga0265330_10001307
508 Ga0265330_10011246
509 Ga0265332_10028422
510 Ga0265320_10030827
511 Ga0265325_10000197
512 Ga0265325_10004002
513 Ga0265329_10007253
514 Ga0265340_10004821
515 Ga0265340_10101577
516 Ga0265339_10004863
517 Ga0265339_10005972
518 Ga0265331_10010610
519 Ga0265316_10006398
520 Ga0265316_10019808
521 Ga0307408_100241472
522 Ga0265313_10001108
523 Ga0265313_10048738
524 Ga0265314_10000028
525 Ga0265314_10017094
526 Ga0265342_10001366
527 Ga0265342_10006851
528 Ga0373949_0023581
529 Ga0373936_0057781
530 Ga0373943_0154520
531 Ga0373955_0350802
532 Ga0373927_0000194
533 Ga0373947_0002668
534 Ga0373947_0112530
535 Ga0373925_0000698
536 Ga0373925_0024394
537 Ga0373925_0094782
538 Ga0436364_0724552
539 Ga0436364_1230042
540 Ga0436363_0649214
541 Ga0436362_0311751
542 Ga0466966_0046967
543 Ga0466970_0161420
544 Ga0466959_0125659
545 Ga0451576_0157574
546 Ga0451576_0393415
547 Ga0466967_0630863
548 Ga0495580_0059577
549 Ga0495580_0087153
550 Ga0495580_0194302
551 Ga0495580_0214286
552 Ga0495582_0124999
553 Ga0495664_0022532
554 Ga0495664_0022779
555 Ga0495664_0029835
556 Ga0495608_0191299
557 Ga0495618_0298867
558 Ga0495628_0053075
559 Ga0495666_0039066
560 Ga0495640_0121226
561 Ga0495645_0139586
562 Ga0495667_0067295
563 Ga0495667_0088517
564 Ga0495667_0223378
565 Ga0495634_0031900
566 Ga0495635_0018702
567 Ga0495623_0007596
568 Ga0495623_0134524
569 Ga0495604_0106176
570 Ga0495604_0110808
571 Ga0495674_0009319
572 Ga0495674_0034809
573 Ga0495674_0081526
574 Ga0495675_0091247
575 Ga0495684_0001378
576 Ga0495684_0013877
577 Ga0495684_0035713
578 Ga0495602_0398458
579 Ga0496102_0409481
580 Ga0496104_0665242
581 Ga0496110_0164640
582 Ga0496115_0120801
583 Ga0501031_0025786
584 Ga0501033_0017136
585 Ga0501034_0006509
586 Ga0501034_0049536
587 Ga0501034_0125825
588 Ga0501036_0323880
589 Ga0501038_0024916
590 Ga0501043_0015650
591 Ga0501043_0019753
592 Ga0501046_0009304
593 Ga0501047_0100657
594 Ga0501067_0035902
595 Ga0501068_0121834
596 Ga0501070_0169276
597 Ga0501073_0060001
598 Ga0501073_0122478
599 Ga0501073_0134500
600 Ga0501073_0151491
601 Ga0501073_0223924
602 Ga0501074_0259780
603 Ga0501080_0017535
604 Ga0501080_0146004
605 Ga0501083_0001112
606 Ga0501083_0046229
607 Ga0501035_0197997
608 Ga0501044_0016229
609 nmdc:mga05p37_10433_c1
610 nmdc:mga05p37_140060_c1
611 nmdc:mga05p37_187497_c1
612 nmdc:mga05p37_35701_c1
613 nmdc:mga0qj67_117802_c1
614 nmdc:mga0qj67_76461_c1
615 nmdc:mga06r32_2671_c1
616 nmdc:mga06r32_34620_c1
617 nmdc:mga06r32_453622_c1
618 nmdc:mga08y16_32303_c1
619 nmdc:mga0n895_365124_c1
620 nmdc:mga0a205_321554_c1
621 Ga0501084_0142789
622 Ga0501084_0213391
623 Ga0501082_0005683
624 Ga0501082_0011171
625 Ga0501082_0187557
626 2884219238

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

242

323

0.92

PF07883

Cupin_2

Cupin domain

102

172

0.92

PF00190

Cupin_1

Cupin

239

343

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o4t-assembly1.cif.gz_B crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 a resolution 0.9402 180 288
3cew-assembly1.cif.gz_A crystal structure of a cupin protein (bf4112) from bacteroides fragilis. northeast structural genomics consortium target bfr205 0.9069 209 288
1o4t-assembly1.cif.gz_B crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 a resolution 0.8854 180 288
3lwc-assembly1.cif.gz_A-2 crystal structure of structural genomics, unknown function (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a resolution 0.8843 214 287
1vrb-assembly1.cif.gz_A crystal structure of putative asparaginyl hydroxylase (2636534) from bacillus subtilis at 2.60 a resolution 0.8841 214 286
ID Description Score Start End Superfamily
af_Q9USR9_537_626_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9467 197 287 2.60.120.10
1o4tB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9402 180 288 2.60.120.10
af_E7FAC3_1039_1126_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9369 197 287 2.60.120.10
af_Q03188_852_942_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9301 195 287 2.60.120.10
af_P93000_22_217_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9228 214 289 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A7Y5RHG9-F1-model_v4 Cupin domain-containing protein 0.9914 28 306 GO:0046872
AF-A0A7C2IWH3-F1-model_v4 Cupin domain-containing protein 0.9849 175 293
AF-A0A7Y5RHG9-F1-model_v4 Cupin domain-containing protein 0.9843 28 306 GO:0046872
AF-A0A2V8UDC6-F1-model_v4 Cupin type-2 domain-containing protein 0.9832 134 290
AF-A0A1I4RD62-F1-model_v4 Cupin domain-containing protein 0.9806 184 287 GO:0046872

Map