F388389

General Info

Members Datasets Scaffolds Average Seq Length
288 211 576 1122

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10000616|Ga0070658_100006161
Length 1134
Sequence MFTKILVANRGEIAIRAFRAAYELGAQTVAVFPYEDRNSMHRLKADEAYQIGSPGHPVRAYLDVAEIIRVAVECGADAIYPGYGFLSENPELAEAAAAAGITFIGPGQHVLEMAGNKVTAKEHARAAGVPVLKSTPASRNIDELLAGAEEIGFPIFAKAVAGGGGRGMRRVDSMDELRPALEEAMREADSAFGDPTMFLEQAVVRPRHIEVQILADASGETVHLFERDCSVQRRHQKVVEIAPAPNLDDSIRQAMYRDAIAFAKSIGYVNAGTVEFLLDTAGERKGQHVFIEMNPRIQVEHTVTEEITDVDLVQAQMRIAFGQSLDELGLHQDNIVRRGAALQCRITTEDPAAGFRPDTGKITTYRSPGGGGIRLDGGTVAAGTQVSPHFDSMLVKMTCRGRDFPAAVARAKRGLAEFRIRGVSTNIPFLQALLDDPSFVAGDLSTSFIEERPDLVHSNPSKDRGTKILNWLADVTVNHPNGEGAGIISPALKLPKLDLHTPAPDGSRQRLLELGPVGFASALRAQKALAVTETTFRDAHQSLLATRVRTKDLLQVAPYVARLTPQLLSVEAWGGATYDVALRFLGEDPWERLSALREAMPNIAIQMLLRGRNTVGYTPYPTEVTDAFVREAADTGVDIFRIFDALNDVSQMRPAIDSVLATGRAVAEVALCYTGDLLDPNEKLYTLDYYLRLAEQIVDAGAHVLAIKDMAGLLRAGAAEKLVSALRGNFDLPLHLHTHDTAGGQLATLLAASGAGVDAVDVASAPMAGTTSQPSASALVAALAHTERDTGLSLSAVSDLEPYWEAVRHAYKPFESGLPGPTGRVYKHEIPGGQLSNLRQQAIALGLADQFEKIENLYAAASRILGNPPKVTPSSKVVGDLALSLAAADADPADFEAYPEKYDIPDSVIGFMAGELGDPPGGWPEPFHSRVLAGRSVKIGTTPISDEDRSALDGDTVARRSALNRLLFAGPTKIYEGVREQYGDLSVVDTVDYLYGLKQGSEHIVEIDTGVRLYFGLQAIGEADDKGMRTVMATLNGQLRPVYVRDRGIAVETASAERADPSKPGHVAAPFSGVVTLQVEQGAHVEAGQSVASIEAMKMEAAITASVPGTVRRLAILRTQQVDAGDLLVEIDPA

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
87 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
97 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
98 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
168 2547132424 Nocardia nova SH22a Isolate Unclassified
169 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
170 2643221575 Microbacterium sp. Root61 Isolate Unclassified
171 2643221692 Nocardia sp. Root136 Isolate Unclassified
172 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
173 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
174 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
175 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
176 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
177 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
178 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
179 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
180 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
181 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
182 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
183 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
184 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
185 2867369537 Streptomyces sp. Z26 Isolate Unclassified
186 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
187 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
188 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
189 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
190 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
191 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
192 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
193 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
194 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
195 2919069694 Microbacterium sp. 1154 Isolate Unclassified
196 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
197 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
198 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
199 2922554459 Rhodococcus sp. 66b Isolate Unclassified
200 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
201 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
202 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
203 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
204 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
205 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
206 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
207 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
208 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
209 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
210 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
211 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.33
Metatranscriptomes 0
Isolates 16.67

Biome Distribution

Category Percentage (%)
Aerial Root 0.35
Bulb 0
Endosphere 5.56
Nodule 0.35
Rhizoplane 9.03
Rhizosphere 65.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000616 3300005327 Bacteria 30727
2 JGI24744J21845_10000417 3300002077 Bacteria 7426
3 JGI24034J26672_10000602 3300002239 Bacteria 4609
4 Ga0070690_100014731 3300005330 Bacteria 4645
5 Ga0068868_100000294 3300005338 Bacteria 33573
6 Ga0070691_10003749 3300005341 Bacteria 6865
7 Ga0070661_100031665 3300005344 Bacteria 3825
8 Ga0070668_100013156 3300005347 Bacteria 6169
9 Ga0070671_100001875 3300005355 Bacteria 16075
10 Ga0070667_100001778 3300005367 Bacteria 19197
11 Ga0070667_100002143 3300005367 Bacteria 17374
12 Ga0070714_100011303 3300005435 Bacteria 7079
13 Ga0070710_10000220 3300005437 Bacteria 26520
14 Ga0070710_10005017 3300005437 Bacteria 6264
15 Ga0070701_10008181 3300005438 Bacteria 4509
16 Ga0070711_100003252 3300005439 Bacteria 9443
17 Ga0070700_100000463 3300005441 Bacteria 20347
18 Ga0070678_100000347 3300005456 Bacteria 21660
19 Ga0068867_100001344 3300005459 Bacteria 17014
20 Ga0070696_100006998 3300005546 Bacteria 7527
21 Ga0070693_100011782 3300005547 Bacteria 4410
22 Ga0070704_100000118 3300005549 Bacteria 28378
23 Ga0068857_100028561 3300005577 Bacteria 4922
24 Ga0068854_100000777 3300005578 Bacteria 18943
25 Ga0070702_100000798 3300005615 Bacteria 12021
26 Ga0070702_100002281 3300005615 Bacteria 8214
27 Ga0070702_100008569 3300005615 Bacteria 4962
28 Ga0068859_100004969 3300005617 Bacteria 13509
29 Ga0068866_10000197 3300005718 Bacteria 28297
30 Ga0068861_100000102 3300005719 Bacteria 42240
31 Ga0068863_100002339 3300005841 Bacteria 18841
32 Ga0068858_100001068 3300005842 Bacteria 28330
33 Ga0068858_100017599 3300005842 Bacteria 6700
34 Ga0081540_1000354 3300005983 Bacteria 46482
35 Ga0075363_100008988 3300006048 Bacteria 4681
36 Ga0075364_10001023 3300006051 Bacteria 14840
37 Ga0075364_10004805 3300006051 Bacteria 7818
38 Ga0075364_10014566 3300006051 Bacteria 4861
39 Ga0075364_10024808 3300006051 Bacteria 3811
40 Ga0070716_100000479 3300006173 Bacteria 16547
41 Ga0070716_100002564 3300006173 Bacteria 8405
42 Ga0070712_100000901 3300006175 Bacteria 17767
43 Ga0075369_10001003 3300006186 Bacteria 9402
44 Ga0075370_10014086 3300006353 Bacteria 4259
45 Ga0075428_100002335 3300006844 Bacteria 20588
46 Ga0075428_100005745 3300006844 Bacteria 13782
47 Ga0068865_100000554 3300006881 Bacteria 20777
48 Ga0068865_100021664 3300006881 Bacteria 4183
49 Ga0097620_100004970 3300006931 Bacteria 13509
50 Ga0105247_10002035 3300009101 Bacteria 14006
51 Ga0114129_10062195 3300009147 Bacteria 5216
52 Ga0105243_10001698 3300009148 Bacteria 18980
53 Ga0105242_10001106 3300009176 Bacteria 21246
54 Ga0105242_10012318 3300009176 Bacteria 6581
55 Ga0105248_10002067 3300009177 Bacteria 22238
56 Ga0105249_10000817 3300009553 Bacteria 28085
57 Ga0157370_10001273 3300013104 Bacteria 31530
58 Ga0157378_10017478 3300013297 Bacteria 6295
59 Ga0163162_10002629 3300013306 Bacteria 17028
60 Ga0157372_10005992 3300013307 Bacteria 12914
61 Ga0157375_10029335 3300013308 Bacteria 5172
62 Ga0157380_10000237 3300014326 Bacteria 33183
63 Ga0157379_10003146 3300014968 Bacteria 13969
64 Ga0163161_10001434 3300017792 Bacteria 17596
65 Ga0213876_10009064 3300021384 Bacteria 5358
66 Ga0213875_10003875 3300021388 Bacteria 8379
67 Ga0207655_1005377 3300025728 Bacteria 8721
68 Ga0207692_10000823 3300025898 Bacteria 11109
69 Ga0207688_10004880 3300025901 Bacteria 7302
70 Ga0207688_10005814 3300025901 Bacteria 6712
71 Ga0207647_10011361 3300025904 Bacteria 6248
72 Ga0207645_10014526 3300025907 Bacteria 5267
73 Ga0207705_10000006 3300025909 Bacteria 657147
74 Ga0207693_10000049 3300025915 Bacteria 100347
75 Ga0207693_10016624 3300025915 Bacteria 5878
76 Ga0207657_10002225 3300025919 Bacteria 21047
77 Ga0207700_10007810 3300025928 Bacteria 6575
78 Ga0207664_10019268 3300025929 Bacteria 5040
79 Ga0207709_10004531 3300025935 Bacteria 8016
80 Ga0207709_10012140 3300025935 Bacteria 4748
81 Ga0207669_10004112 3300025937 Bacteria 6375
82 Ga0207665_10003396 3300025939 Bacteria 10656
83 Ga0207665_10006174 3300025939 Bacteria 7956
84 Ga0207665_10006623 3300025939 Bacteria 7685
85 Ga0207689_10008679 3300025942 Bacteria 8845
86 Ga0207689_10010339 3300025942 Bacteria 8040
87 Ga0207712_10001309 3300025961 Bacteria 17057
88 Ga0207668_10004346 3300025972 Bacteria 8322
89 Ga0207658_10004417 3300025986 Bacteria 9783
90 Ga0207658_10012013 3300025986 Bacteria 5906
91 Ga0207677_10002239 3300026023 Bacteria 10159
92 Ga0207703_10025095 3300026035 Bacteria 4688
93 Ga0207639_10005576 3300026041 Bacteria 8513
94 Ga0207678_10006306 3300026067 Bacteria 10532
95 Ga0207678_10008015 3300026067 Bacteria 9314
96 Ga0207708_10000411 3300026075 Bacteria 33673
97 Ga0207708_10011584 3300026075 Bacteria 6572
98 Ga0207708_10028310 3300026075 Bacteria 4244
99 Ga0207641_10007452 3300026088 Bacteria 9101
100 Ga0207648_10000187 3300026089 Bacteria 65094
101 Ga0207648_10008805 3300026089 Bacteria 9722
102 Ga0207648_10009745 3300026089 Bacteria 9181
103 Ga0207674_10003306 3300026116 Bacteria 19815
104 Ga0207675_100000220 3300026118 Bacteria 53425
105 Ga0207675_100023851 3300026118 Bacteria 5689
106 Ga0207675_100037601 3300026118 Bacteria 4514
107 Ga0207683_10000197 3300026121 Bacteria 52074
108 Ga0207683_10002676 3300026121 Bacteria 15573
109 Ga0207683_10007509 3300026121 Bacteria 9349
110 Ga0207683_10034470 3300026121 Bacteria 4399
111 Ga0265327_10000004 3300031251 Bacteria 803973
112 Ga0265327_10000408 3300031251 Bacteria 79100
113 Ga0307413_10010632 3300031824 Bacteria 4480
114 Ga0307406_10000034 3300031901 Bacteria 83739
115 Ga0307416_100019016 3300032002 Bacteria 4859
116 Ga0373926_0000076 3300035083 Bacteria 18817
117 Ga0373936_0001120 3300035113 Bacteria 9619
118 Ga0373936_0005742 3300035113 Bacteria 4679
119 Ga0373943_0000270 3300035170 Bacteria 21406
120 Ga0373946_0000423 3300035171 Bacteria 13798
121 Ga0373927_0001743 3300035695 Bacteria 16246
122 Ga0373933_0002245 3300035724 Bacteria 11023
123 Ga0373947_0007859 3300035725 Bacteria 6159
124 Ga0373925_0012633 3300037068 Bacteria 6116
125 Ga0436364_0389462 3300037853 Bacteria 9741
126 Ga0436365_1666449 3300039437 Bacteria 21839
127 Ga0436365_1770116 3300039437 Bacteria 18694
128 Ga0439466_0001598 3300041411 Bacteria 8850
129 Ga0439465_0003273 3300041413 Bacteria 5294
130 Ga0466965_0011335 3300044683 Bacteria 4176
131 Ga0466966_0020371 3300044684 Bacteria 4362
132 Ga0466963_0004212 3300044694 Bacteria 8339
133 Ga0466957_0002030 3300044842 Bacteria 10794
134 Ga0466960_0000116 3300044901 Bacteria 26505
135 Ga0466960_0001058 3300044901 Bacteria 9865
136 Ga0466959_0008665 3300045049 Bacteria 7199
137 Ga0466967_0003298 3300045976 Bacteria 10478
138 Ga0466967_0005072 3300045976 Bacteria 9037
139 Ga0466967_0008750 3300045976 Bacteria 7457
140 Ga0495627_000214 3300046453 Bacteria 62803
141 Ga0495651_0013746 3300046462 Bacteria 6258
142 Ga0495653_0002649 3300046463 Bacteria 14243
143 Ga0495608_0011403 3300046511 Bacteria 6185
144 Ga0495668_0000573 3300046616 Bacteria 45058
145 Ga0495635_0001191 3300046663 Bacteria 17323
146 Ga0495635_0008304 3300046663 Bacteria 7247
147 Ga0495657_0006349 3300046675 Bacteria 9258
148 Ga0495674_0017743 3300047319 Bacteria 6625
149 Ga0495680_0014671 3300047322 Bacteria 6777
150 Ga0495680_0024760 3300047322 Bacteria 4974
151 Ga0495684_0003816 3300047471 Bacteria 11744
152 Ga0495593_0007005 3300047673 Bacteria 6609
153 Ga0496100_0000021 3300048903 Bacteria 140074
154 Ga0496101_0000088 3300048904 Bacteria 101493
155 Ga0496101_0000432 3300048904 Bacteria 26783
156 Ga0496101_0002584 3300048904 Bacteria 11123
157 Ga0496101_0015307 3300048904 Bacteria 5166
158 Ga0496102_0001336 3300048905 Bacteria 22132
159 Ga0496102_0013725 3300048905 Bacteria 7025
160 Ga0496103_0001995 3300048906 Bacteria 13156
161 Ga0496103_0006487 3300048906 Bacteria 6979
162 Ga0496104_0013758 3300048907 Bacteria 7298
163 Ga0496106_0004094 3300048909 Bacteria 10861
164 Ga0496106_0004574 3300048909 Bacteria 10261
165 Ga0496107_0001185 3300048910 Bacteria 15848
166 Ga0496108_0000616 3300048911 Bacteria 27935
167 Ga0496108_0002904 3300048911 Bacteria 13767
168 Ga0496108_0036327 3300048911 Bacteria 4099
169 Ga0496109_0000042 3300048912 Bacteria 138654
170 Ga0496109_0030836 3300048912 Bacteria 4807
171 Ga0496110_0005275 3300048913 Bacteria 10117
172 Ga0496110_0012200 3300048913 Bacteria 7060
173 Ga0496111_0005041 3300048914 Bacteria 8402
174 Ga0496112_0006921 3300048915 Bacteria 10007
175 Ga0496113_0002072 3300048916 Bacteria 11538
176 Ga0496114_0000108 3300048917 Bacteria 59737
177 Ga0496114_0015915 3300048917 Bacteria 6053
178 Ga0496115_0003184 3300048918 Bacteria 11793
179 Ga0496116_0000875 3300048919 Bacteria 37556
180 Ga0496117_0000232 3300048920 Bacteria 105479
181 Ga0496118_0002054 3300048921 Bacteria 28434
182 Ga0496121_0000002 3300048924 Bacteria 1494588
183 Ga0496122_0000048 3300048925 Bacteria 269532
184 Ga0496122_0004089 3300048925 Bacteria 18484
185 Ga0496122_0040801 3300048925 Bacteria 3682
186 Ga0496123_0001071 3300048926 Bacteria 41360
187 Ga0496123_0006876 3300048926 Bacteria 10888
188 Ga0496123_0026230 3300048926 Bacteria 4372
189 Ga0496124_0000002 3300048927 Bacteria 1494588
190 Ga0496124_0042805 3300048927 Bacteria 3895
191 Ga0496125_0000002 3300048928 Bacteria 1480920
192 Ga0496125_0000097 3300048928 Bacteria 204607
193 Ga0496125_0002398 3300048928 Bacteria 24410
194 Ga0496125_0017077 3300048928 Bacteria 6934
195 Ga0496126_0000009 3300048929 Bacteria 750350
196 Ga0496126_0002608 3300048929 Bacteria 24019
197 Ga0501031_0009745 3300049568 Bacteria 6254
198 Ga0501031_0017156 3300049568 Bacteria 4704
199 Ga0501032_0013001 3300049569 Bacteria 5928
200 Ga0501033_0008415 3300049570 Bacteria 7989
201 Ga0501034_0001642 3300049571 Bacteria 28889
202 Ga0501034_0004148 3300049571 Bacteria 16223
203 Ga0501034_0005230 3300049571 Bacteria 14239
204 Ga0501034_0016054 3300049571 Bacteria 7684
205 Ga0501034_0025840 3300049571 Bacteria 5981
206 Ga0501036_0016199 3300049572 Bacteria 6225
207 Ga0501037_0003375 3300049573 Bacteria 11608
208 Ga0501037_0003861 3300049573 Bacteria 10869
209 Ga0501038_0001528 3300049574 Bacteria 21344
210 Ga0501038_0021658 3300049574 Bacteria 5767
211 Ga0501038_0021968 3300049574 Bacteria 5723
212 Ga0501039_0000288 3300049575 Bacteria 35904
213 Ga0501043_0000411 3300049579 Bacteria 38553
214 Ga0501043_0019102 3300049579 Bacteria 5380
215 Ga0501046_0000357 3300049580 Bacteria 46114
216 Ga0501046_0016416 3300049580 Bacteria 6202
217 Ga0501047_0002176 3300049581 Bacteria 18761
218 Ga0501048_0010022 3300049582 Bacteria 7092
219 Ga0501070_0000614 3300049586 Bacteria 32686
220 Ga0501070_0002499 3300049586 Bacteria 16111
221 Ga0501070_0017715 3300049586 Bacteria 5980
222 Ga0501071_0000410 3300049587 Bacteria 21274
223 Ga0501073_0000940 3300049589 Bacteria 20936
224 Ga0501080_0007309 3300049742 Bacteria 9964
225 Ga0501035_0000344 3300049822 Bacteria 53753
226 Ga0501035_0013566 3300049822 Bacteria 7519
227 Ga0501044_0001429 3300049823 Bacteria 28049
228 Ga0501044_0011255 3300049823 Bacteria 9699
229 Ga0501045_0005720 3300049824 Bacteria 8607
230 nmdc:mga00v17_12117_c1 3300050491 Bacteria 4751
231 nmdc:mga00v17_14640_c1 3300050491 Bacteria 4385
232 nmdc:mga0yw44_1765_c1 3300050492 Bacteria 8807
233 nmdc:mga05p37_27189_c1 3300050507 Bacteria 6964
234 nmdc:mga0qj67_7908_c1 3300050509 Bacteria 7858
235 nmdc:mga0sz30_673_c1 3300050516 Bacteria 12605
236 Ga0500559_0000192 3300053136 Bacteria 49223
237 Ga0500559_0000606 3300053136 Bacteria 24406
238 Ga0500568_0002757 3300053139 Bacteria 10166
239 Ga0500616_0000540 3300053153 Bacteria 47313
240 Ga0500645_000075 3300053730 Bacteria 78736
241 2548698517 2547132424 Bacteria 8348532
242 2566993105 2565956761 Bacteria 6601618
243 2643885063 2643221575 Bacteria 4022601
244 2644513059 2643221692 Bacteria 7282860
245 2738664148 2738541264 Bacteria 5935393
246 2738706054 2738541274 Bacteria 6909446
247 2738888602 2738541308 Bacteria 7020677
248 2738889932 2738541308 Bacteria 7020677
249 2739143283 2738541356 Bacteria 5935017
250 2739203239 2738543005 Bacteria 5278128
251 2739238677 2738543011 Bacteria 5731169
252 2739333046 2738543028 Bacteria 6917070
253 2739362225 2738543034 Bacteria 6084756
254 2744953899 2744054611 Bacteria 5611514
255 2774381613 2773857758 Bacteria 3592392
256 2812322795 2811994872 Bacteria 4121241
257 2842138499 2842134933 Bacteria 5847019
258 2842892722 2842888712 Bacteria 4279094
259 2867374825 2867369537 Bacteria 6501581
260 2889300948 2889300758 Bacteria 5690814
261 2902812715 2902810491 Bacteria 6794147
262 2902816982 2902810491 Bacteria 6794147
263 2904512731 2904509784 Bacteria 3520416
264 2904538901 2904535858 Bacteria 6308016
265 2904770133 2904765812 Bacteria 5369154
266 2904771018 2904770941 Bacteria 5580202
267 2906802173 2906799679 Bacteria 4031749
268 2908681271 2908678064 Bacteria 3482747
269 2908815061 2908811453 Bacteria 5478616
270 2919071435 2919069694 Bacteria 3622919
271 2919424455 2919420072 Bacteria 5390363
272 2919436848 2919432681 Bacteria 5390474
273 2919715911 2919713450 Bacteria 7431245
274 2922556801 2922554459 Bacteria 6683962
275 2928142536 2928142448 Bacteria 5288925
276 2929214785 2929212328 Bacteria 7708288
277 2939582852 2939582691 Bacteria 7088898
278 2939587224 2939582691 Bacteria 7088898
279 2939587650 2939582691 Bacteria 7088898
280 2939744469 2939743619 Bacteria 5762299
281 2974297751 2974294766 Bacteria 3767688
282 2974317206 2974315732 Bacteria 4602776
283 2974326015 2974324384 Bacteria 3750535
284 2977230977 2977228692 Bacteria 3450105
285 2977239773 2977236895 Bacteria 3569373
286 2977253663 2977251589 Bacteria 2952848
287 2984545955 2984542743 Bacteria 3569378
288 8004184809 8004182704 Bacteria 3391155
289 Ga0070658_10000616
290 JGI24744J21845_10000417
291 JGI24034J26672_10000602
292 Ga0070690_100014731
293 Ga0068868_100000294
294 Ga0070691_10003749
295 Ga0070661_100031665
296 Ga0070668_100013156
297 Ga0070671_100001875
298 Ga0070667_100001778
299 Ga0070667_100002143
300 Ga0070714_100011303
301 Ga0070710_10000220
302 Ga0070710_10005017
303 Ga0070701_10008181
304 Ga0070711_100003252
305 Ga0070700_100000463
306 Ga0070678_100000347
307 Ga0068867_100001344
308 Ga0070696_100006998
309 Ga0070693_100011782
310 Ga0070704_100000118
311 Ga0068857_100028561
312 Ga0068854_100000777
313 Ga0070702_100000798
314 Ga0070702_100002281
315 Ga0070702_100008569
316 Ga0068859_100004969
317 Ga0068866_10000197
318 Ga0068861_100000102
319 Ga0068863_100002339
320 Ga0068858_100001068
321 Ga0068858_100017599
322 Ga0081540_1000354
323 Ga0075363_100008988
324 Ga0075364_10001023
325 Ga0075364_10004805
326 Ga0075364_10014566
327 Ga0075364_10024808
328 Ga0070716_100000479
329 Ga0070716_100002564
330 Ga0070712_100000901
331 Ga0075369_10001003
332 Ga0075370_10014086
333 Ga0075428_100002335
334 Ga0075428_100005745
335 Ga0068865_100000554
336 Ga0068865_100021664
337 Ga0097620_100004970
338 Ga0105247_10002035
339 Ga0114129_10062195
340 Ga0105243_10001698
341 Ga0105242_10001106
342 Ga0105242_10012318
343 Ga0105248_10002067
344 Ga0105249_10000817
345 Ga0157370_10001273
346 Ga0157378_10017478
347 Ga0163162_10002629
348 Ga0157372_10005992
349 Ga0157375_10029335
350 Ga0157380_10000237
351 Ga0157379_10003146
352 Ga0163161_10001434
353 Ga0213876_10009064
354 Ga0213875_10003875
355 Ga0207655_1005377
356 Ga0207692_10000823
357 Ga0207688_10004880
358 Ga0207688_10005814
359 Ga0207647_10011361
360 Ga0207645_10014526
361 Ga0207705_10000006
362 Ga0207693_10000049
363 Ga0207693_10016624
364 Ga0207657_10002225
365 Ga0207700_10007810
366 Ga0207664_10019268
367 Ga0207709_10004531
368 Ga0207709_10012140
369 Ga0207669_10004112
370 Ga0207665_10003396
371 Ga0207665_10006174
372 Ga0207665_10006623
373 Ga0207689_10008679
374 Ga0207689_10010339
375 Ga0207712_10001309
376 Ga0207668_10004346
377 Ga0207658_10004417
378 Ga0207658_10012013
379 Ga0207677_10002239
380 Ga0207703_10025095
381 Ga0207639_10005576
382 Ga0207678_10006306
383 Ga0207678_10008015
384 Ga0207708_10000411
385 Ga0207708_10011584
386 Ga0207708_10028310
387 Ga0207641_10007452
388 Ga0207648_10000187
389 Ga0207648_10008805
390 Ga0207648_10009745
391 Ga0207674_10003306
392 Ga0207675_100000220
393 Ga0207675_100023851
394 Ga0207675_100037601
395 Ga0207683_10000197
396 Ga0207683_10002676
397 Ga0207683_10007509
398 Ga0207683_10034470
399 Ga0265327_10000004
400 Ga0265327_10000408
401 Ga0307413_10010632
402 Ga0307406_10000034
403 Ga0307416_100019016
404 Ga0373926_0000076
405 Ga0373936_0001120
406 Ga0373936_0005742
407 Ga0373943_0000270
408 Ga0373946_0000423
409 Ga0373927_0001743
410 Ga0373933_0002245
411 Ga0373947_0007859
412 Ga0373925_0012633
413 Ga0436364_0389462
414 Ga0436365_1666449
415 Ga0436365_1770116
416 Ga0439466_0001598
417 Ga0439465_0003273
418 Ga0466965_0011335
419 Ga0466966_0020371
420 Ga0466963_0004212
421 Ga0466957_0002030
422 Ga0466960_0000116
423 Ga0466960_0001058
424 Ga0466959_0008665
425 Ga0466967_0003298
426 Ga0466967_0005072
427 Ga0466967_0008750
428 Ga0495627_000214
429 Ga0495651_0013746
430 Ga0495653_0002649
431 Ga0495608_0011403
432 Ga0495668_0000573
433 Ga0495635_0001191
434 Ga0495635_0008304
435 Ga0495657_0006349
436 Ga0495674_0017743
437 Ga0495680_0014671
438 Ga0495680_0024760
439 Ga0495684_0003816
440 Ga0495593_0007005
441 Ga0496100_0000021
442 Ga0496101_0000088
443 Ga0496101_0000432
444 Ga0496101_0002584
445 Ga0496101_0015307
446 Ga0496102_0001336
447 Ga0496102_0013725
448 Ga0496103_0001995
449 Ga0496103_0006487
450 Ga0496104_0013758
451 Ga0496106_0004094
452 Ga0496106_0004574
453 Ga0496107_0001185
454 Ga0496108_0000616
455 Ga0496108_0002904
456 Ga0496108_0036327
457 Ga0496109_0000042
458 Ga0496109_0030836
459 Ga0496110_0005275
460 Ga0496110_0012200
461 Ga0496111_0005041
462 Ga0496112_0006921
463 Ga0496113_0002072
464 Ga0496114_0000108
465 Ga0496114_0015915
466 Ga0496115_0003184
467 Ga0496116_0000875
468 Ga0496117_0000232
469 Ga0496118_0002054
470 Ga0496121_0000002
471 Ga0496122_0000048
472 Ga0496122_0004089
473 Ga0496122_0040801
474 Ga0496123_0001071
475 Ga0496123_0006876
476 Ga0496123_0026230
477 Ga0496124_0000002
478 Ga0496124_0042805
479 Ga0496125_0000002
480 Ga0496125_0000097
481 Ga0496125_0002398
482 Ga0496125_0017077
483 Ga0496126_0000009
484 Ga0496126_0002608
485 Ga0501031_0009745
486 Ga0501031_0017156
487 Ga0501032_0013001
488 Ga0501033_0008415
489 Ga0501034_0001642
490 Ga0501034_0004148
491 Ga0501034_0005230
492 Ga0501034_0016054
493 Ga0501034_0025840
494 Ga0501036_0016199
495 Ga0501037_0003375
496 Ga0501037_0003861
497 Ga0501038_0001528
498 Ga0501038_0021658
499 Ga0501038_0021968
500 Ga0501039_0000288
501 Ga0501043_0000411
502 Ga0501043_0019102
503 Ga0501046_0000357
504 Ga0501046_0016416
505 Ga0501047_0002176
506 Ga0501048_0010022
507 Ga0501070_0000614
508 Ga0501070_0002499
509 Ga0501070_0017715
510 Ga0501071_0000410
511 Ga0501073_0000940
512 Ga0501080_0007309
513 Ga0501035_0000344
514 Ga0501035_0013566
515 Ga0501044_0001429
516 Ga0501044_0011255
517 Ga0501045_0005720
518 nmdc:mga00v17_12117_c1
519 nmdc:mga00v17_14640_c1
520 nmdc:mga0yw44_1765_c1
521 nmdc:mga05p37_27189_c1
522 nmdc:mga0qj67_7908_c1
523 nmdc:mga0sz30_673_c1
524 Ga0500559_0000192
525 Ga0500559_0000606
526 Ga0500568_0002757
527 Ga0500616_0000540
528 Ga0500645_000075
529 2548698517
530 2566993105
531 2643885063
532 2644513059
533 2738664148
534 2738706054
535 2738888602
536 2738889932
537 2739143283
538 2739203239
539 2739238677
540 2739333046
541 2739362225
542 2744953899
543 2774381613
544 2812322795
545 2842138499
546 2842892722
547 2867374825
548 2889300948
549 2902812715
550 2902816982
551 2904512731
552 2904538901
553 2904770133
554 2904771018
555 2906802173
556 2908681271
557 2908815061
558 2919071435
559 2919424455
560 2919436848
561 2919715911
562 2922556801
563 2928142536
564 2929214785
565 2939582852
566 2939587224
567 2939587650
568 2939744469
569 2974297751
570 2974317206
571 2974326015
572 2977230977
573 2977239773
574 2977253663
575 2984545955
576 8004184809

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00289

Biotin_carb_N

Biotin carboxylase, N-terminal domain

1

111

0.98

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

116

328

0.98

PF02785

Biotin_carb_C

Biotin carboxylase C-terminal domain

343

451

0.97

PF02436

PYC_OADA

Conserved carboxylase domain

825

1015

0.95

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

1063

1131

0.93

PF00682

HMGL-like

HMGL-like

622

803

0.88

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

125

296

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gu9-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant 0.9487 1057 1124
2d5d-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii 0.9474 1057 1124
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.9455 1058 1124
4hr7-assembly1.cif.gz_B crystal structure of biotin carboxyl carrier protein-biotin carboxylase complex from e.coli 0.9418 1058 1124
2evb-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form i 0.9401 1057 1124
ID Description Score Start End Superfamily
af_I6YEU0_1051_1127_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9985 1048 1124 2.40.50.100
af_I6YEU0_1051_1127_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9857 1048 1124 2.40.50.100
af_I6YEU0_478_987_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9853 475 984 3.20.20.70
af_I6YEU0_478_987_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9833 475 984 3.20.20.70
af_A0A1D6J3D9_373_520_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9751 205 319 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A351ETG8-F1-model_v4 biotin carboxylase (EC 6.3.4.14) 0.9855 179 306 GO:0004736
GO:0005524
AF-A0A1V3XQM7-F1-model_v4 HMGL-like family protein 0.9766 521 748 GO:0004736
GO:0005737
GO:0006090
GO:0006094
AF-X1CYL3-F1-model_v4 Pyruvate carboxyltransferase domain-containing protein 0.9755 540 792 GO:0004736
GO:0005737
GO:0006090
GO:0006094
AF-A0A4Q7FC82-F1-model_v4 Acetyl/propionyl-CoA carboxylase subunit alpha 0.9726 144 273 GO:0003824
GO:0005524
AF-A0A0B0D370-F1-model_v4 Pyruvate carboxyltransferase domain-containing protein 0.9714 513 704 GO:0004736
GO:0005737
GO:0006090
GO:0006094

Map