F385338

General Info

Members Datasets Scaffolds Average Seq Length
283 158 283 293

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10166589|Ga0070658_101665893
Length 303
Sequence VKRIALFGSKGQLGVELKSEFTRRGYEVACFERSTVDITDPAAVERAITGCDPAVVLNAAAYNQVDVAETEPLAAFQVNALAVRNLAIACRNSDAQLVHFSTDYVFDGQAGRAYREEDPTRPLGAYAVSKLAGELYARAYLDAPLIIRTSGVFGPGGMETARGNFVELMLRLALENTPQNKPIRVVEDHVASPTYAPALAARTADLVERGTHGMNGTFHIGGGTPISWFDWAAKIFGAAGLDPQLKPTNEREFRTPARRPKYSALSNAKIEALGIAPMPSLDDAIREYLGARLTATDTREKRF

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
87 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
95 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
96 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
99 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
111 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
112 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0.35
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.59
Stem 0
Stem Tuber 0
Unclassified 1.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10166589 3300005327 Unclassified 1850
2 Ga0070683_100001856 3300005329 Bacteria 16491
3 Ga0070683_100032520 3300005329 Bacteria 4750
4 Ga0070683_100348542 3300005329 Bacteria 1410
5 Ga0070683_100463204 3300005329 Unclassified 1210
6 Ga0070680_100004843 3300005336 Bacteria 10137
7 Ga0070680_100234336 3300005336 Bacteria 1551
8 Ga0070691_10002197 3300005341 Bacteria 8629
9 Ga0070661_100045992 3300005344 Unclassified 3192
10 Ga0070709_10029739 3300005434 Bacteria 3271
11 Ga0070709_10401162 3300005434 Bacteria 1024
12 Ga0070713_100394222 3300005436 Bacteria 1292
13 Ga0070711_100190206 3300005439 Bacteria 1577
14 Ga0070711_100277069 3300005439 Bacteria 1326
15 Ga0070708_100288717 3300005445 Bacteria 1544
16 Ga0070681_10001551 3300005458 Bacteria 20353
17 Ga0070681_10002851 3300005458 Bacteria 15976
18 Ga0068867_100233868 3300005459 Unclassified 1487
19 Ga0070706_100053031 3300005467 Bacteria 3743
20 Ga0070679_100001406 3300005530 Bacteria 21251
21 Ga0070679_100137550 3300005530 Bacteria 2424
22 Ga0070684_100000231 3300005535 Bacteria 38761
23 Ga0070684_100082246 3300005535 Bacteria 2851
24 Ga0070684_100160339 3300005535 Bacteria 2040
25 Ga0070684_100246519 3300005535 Bacteria 1632
26 Ga0068853_100155107 3300005539 Unclassified 2063
27 Ga0070696_100000854 3300005546 Bacteria 19683
28 Ga0070665_100285654 3300005548 Bacteria 1652
29 Ga0070665_100295627 3300005548 Bacteria 1622
30 Ga0068855_100017086 3300005563 Bacteria 8728
31 Ga0068855_100033630 3300005563 Bacteria 6117
32 Ga0068855_100046091 3300005563 Bacteria 5154
33 Ga0068855_100177636 3300005563 Bacteria 2408
34 Ga0070664_100174611 3300005564 Unclassified 1907
35 Ga0068857_100000274 3300005577 Bacteria 35189
36 Ga0068857_100131383 3300005577 Bacteria 2258
37 Ga0068856_100001029 3300005614 Bacteria 29689
38 Ga0068856_100031348 3300005614 Bacteria 5201
39 Ga0068852_100018067 3300005616 Bacteria 5548
40 Ga0068859_100074304 3300005617 Bacteria 3438
41 Ga0068859_100500739 3300005617 Bacteria 1310
42 Ga0068863_100014167 3300005841 Bacteria 7682
43 Ga0068858_100130275 3300005842 Bacteria 2358
44 Ga0070717_10071636 3300006028 Unclassified 2892
45 Ga0097621_100107340 3300006237 Bacteria 2356
46 Ga0097621_100138979 3300006237 Bacteria 2074
47 Ga0097621_100402785 3300006237 Unclassified 1225
48 Ga0068871_100059284 3300006358 Bacteria 3118
49 Ga0068871_100116672 3300006358 Bacteria 2251
50 Ga0075433_10238986 3300006852 Bacteria 1613
51 Ga0068865_100493961 3300006881 Bacteria 1019
52 Ga0075436_100001704 3300006914 Bacteria 15044
53 Ga0097620_100074304 3300006931 Bacteria 3438
54 Ga0097620_100500728 3300006931 Bacteria 1310
55 Ga0105240_10001321 3300009093 Bacteria 42794
56 Ga0105240_10007445 3300009093 Bacteria 15891
57 Ga0105240_10007906 3300009093 Bacteria 15339
58 Ga0105240_10025832 3300009093 Bacteria 7712
59 Ga0105240_10047940 3300009093 Bacteria 5403
60 Ga0105240_10176330 3300009093 Bacteria 2527
61 Ga0105240_10217609 3300009093 Bacteria 2227
62 Ga0105245_10004465 3300009098 Bacteria 12367
63 Ga0105245_10178746 3300009098 Unclassified 2026
64 Ga0114129_10426018 3300009147 Bacteria 1744
65 Ga0105241_10161078 3300009174 Bacteria 1844
66 Ga0105241_10425218 3300009174 Bacteria 1170
67 Ga0105242_10007899 3300009176 Bacteria 8188
68 Ga0105242_10132073 3300009176 Bacteria 2157
69 Ga0105248_10007657 3300009177 Bacteria 11866
70 Ga0105248_10097850 3300009177 Bacteria 3306
71 Ga0105248_10414536 3300009177 Bacteria 1517
72 Ga0105248_10461969 3300009177 Bacteria 1431
73 Ga0105237_10002819 3300009545 Bacteria 21130
74 Ga0105237_10005322 3300009545 Bacteria 14554
75 Ga0105237_10006646 3300009545 Bacteria 12782
76 Ga0105237_10067014 3300009545 Bacteria 3584
77 Ga0105237_10543693 3300009545 Bacteria 1168
78 Ga0105238_10005715 3300009551 Bacteria 12293
79 Ga0105238_10081616 3300009551 Unclassified 3223
80 Ga0105238_10152090 3300009551 Bacteria 2289
81 Ga0105238_10157922 3300009551 Unclassified 2243
82 Ga0105249_10004324 3300009553 Bacteria 12285
83 Ga0105249_10171049 3300009553 Bacteria 2107
84 Ga0105249_10186783 3300009553 Unclassified 2020
85 Ga0105239_10033684 3300010375 Bacteria 5624
86 Ga0105239_10036796 3300010375 Bacteria 5369
87 Ga0105239_10109418 3300010375 Bacteria 3062
88 Ga0105239_10168079 3300010375 Unclassified 2452
89 Ga0105239_10307227 3300010375 Bacteria 1787
90 Ga0105239_10593261 3300010375 Bacteria 1263
91 Ga0105246_10001366 3300011119 Bacteria 14405
92 Ga0105246_10297388 3300011119 Unclassified 1302
93 Ga0157370_10003897 3300013104 Bacteria 17381
94 Ga0157370_10004390 3300013104 Bacteria 16183
95 Ga0157370_10177464 3300013104 Unclassified 1980
96 Ga0157370_10347666 3300013104 Bacteria 1367
97 Ga0157369_10000903 3300013105 Bacteria 37889
98 Ga0157369_10010935 3300013105 Bacteria 10330
99 Ga0157369_10225196 3300013105 Bacteria 1962
100 Ga0157369_10583884 3300013105 Bacteria 1154
101 Ga0157374_10049155 3300013296 Bacteria 3917
102 Ga0157378_10736597 3300013297 Bacteria 1008
103 Ga0163162_10385029 3300013306 Bacteria 1536
104 Ga0157372_10008144 3300013307 Bacteria 11145
105 Ga0157375_10001761 3300013308 Bacteria 18567
106 Ga0163163_10011702 3300014325 Bacteria 7969
107 Ga0163163_10030972 3300014325 Bacteria 5158
108 Ga0163163_10203923 3300014325 Bacteria 2026
109 Ga0157377_10233150 3300014745 Unclassified 1185
110 Ga0157376_10006963 3300014969 Bacteria 8019
111 Ga0157376_10129203 3300014969 Bacteria 2252
112 Ga0157376_10198754 3300014969 Bacteria 1843
113 Ga0157376_10256357 3300014969 Bacteria 1636
114 Ga0157376_10393059 3300014969 Bacteria 1339
115 Ga0157376_10450842 3300014969 Unclassified 1255
116 Ga0213874_10012246 3300021377 Bacteria 2196
117 Ga0213876_10015500 3300021384 Bacteria 4034
118 Ga0207699_10092309 3300025906 Bacteria 1903
119 Ga0207707_10000705 3300025912 Bacteria 33231
120 Ga0207707_10003520 3300025912 Bacteria 13865
121 Ga0207707_10119047 3300025912 Bacteria 2308
122 Ga0207707_10207054 3300025912 Unclassified 1709
123 Ga0207695_10000843 3300025913 Bacteria 56294
124 Ga0207695_10002645 3300025913 Bacteria 26181
125 Ga0207695_10002930 3300025913 Bacteria 24635
126 Ga0207695_10095046 3300025913 Unclassified 2986
127 Ga0207671_10024725 3300025914 Bacteria 4511
128 Ga0207671_10112137 3300025914 Bacteria 2076
129 Ga0207663_10079080 3300025916 Bacteria 2146
130 Ga0207660_10115681 3300025917 Unclassified 2025
131 Ga0207660_10451819 3300025917 Bacteria 1039
132 Ga0207649_10075607 3300025920 Bacteria 2165
133 Ga0207652_10015720 3300025921 Bacteria 6165
134 Ga0207652_10103958 3300025921 Bacteria 2512
135 Ga0207694_10000435 3300025924 Bacteria 38792
136 Ga0207694_10092048 3300025924 Unclassified 2393
137 Ga0207687_10003742 3300025927 Bacteria 10225
138 Ga0207687_10027264 3300025927 Bacteria 3832
139 Ga0207700_10045842 3300025928 Bacteria 3230
140 Ga0207686_10042865 3300025934 Bacteria 2769
141 Ga0207711_10126358 3300025941 Bacteria 2288
142 Ga0207661_10001452 3300025944 Bacteria 16006
143 Ga0207661_10017675 3300025944 Bacteria 5284
144 Ga0207661_10079358 3300025944 Bacteria 2705
145 Ga0207661_10106128 3300025944 Bacteria 2368
146 Ga0207661_10312404 3300025944 Bacteria 1411
147 Ga0207679_10236571 3300025945 Unclassified 1545
148 Ga0207667_10002003 3300025949 Bacteria 25560
149 Ga0207667_10114077 3300025949 Bacteria 2786
150 Ga0207712_10020268 3300025961 Bacteria 4354
151 Ga0207677_10107217 3300026023 Bacteria 2072
152 Ga0207703_10026742 3300026035 Bacteria 4545
153 Ga0207703_10106045 3300026035 Bacteria 2390
154 Ga0207703_10413499 3300026035 Bacteria 1254
155 Ga0207702_10001718 3300026078 Bacteria 21566
156 Ga0207641_10271368 3300026088 Bacteria 1592
157 Ga0207648_10094960 3300026089 Bacteria 2608
158 Ga0207674_10000110 3300026116 Bacteria 94822
159 Ga0207674_10090021 3300026116 Bacteria 3060
160 Ga0207698_10061357 3300026142 Unclassified 2929
161 Ga0268266_10095668 3300028379 Bacteria 2609
162 Ga0268264_10527883 3300028381 Unclassified 1155
163 Ga0265338_10110212 3300028800 Bacteria 2219
164 Ga0265338_10157788 3300028800 Unclassified 1755
165 Ga0265762_1021492 3300030760 Bacteria 1190
166 Ga0265332_10018691 3300031238 Bacteria 3059
167 Ga0265320_10050050 3300031240 Bacteria 2032
168 Ga0265325_10030509 3300031241 Bacteria 2890
169 Ga0265325_10032117 3300031241 Bacteria 2805
170 Ga0265329_10016489 3300031242 Bacteria 2558
171 Ga0265340_10012381 3300031247 Bacteria 4507
172 Ga0265340_10023649 3300031247 Bacteria 3131
173 Ga0265339_10079008 3300031249 Bacteria 1741
174 Ga0265316_10002786 3300031344 Bacteria 17911
175 Ga0265316_10006136 3300031344 Bacteria 11527
176 Ga0265316_10008142 3300031344 Bacteria 9757
177 Ga0265316_10028580 3300031344 Bacteria 4598
178 Ga0265316_10054798 3300031344 Bacteria 3121
179 Ga0265316_10126807 3300031344 Bacteria 1924
180 Ga0265316_10174483 3300031344 Bacteria 1603
181 Ga0265313_10002398 3300031595 Bacteria 16232
182 Ga0265314_10003587 3300031711 Bacteria 14944
183 Ga0265314_10005847 3300031711 Bacteria 11015
184 Ga0265314_10068041 3300031711 Bacteria 2396
185 Ga0265342_10037309 3300031712 Bacteria 2965
186 Ga0373934_0060831 3300035086 Bacteria 1504
187 Ga0373944_0029078 3300035089 Bacteria 1650
188 Ga0373923_0050369 3300035111 Bacteria 1744
189 Ga0373936_0049607 3300035113 Bacteria 1696
190 Ga0373936_0101763 3300035113 Bacteria 1213
191 Ga0373953_0133021 3300035117 Bacteria 1061
192 Ga0373954_0003632 3300035118 Bacteria 6567
193 Ga0373954_0056694 3300035118 Bacteria 1844
194 Ga0373956_0140071 3300035119 Bacteria 1135
195 Ga0373946_0088543 3300035171 Bacteria 1368
196 Ga0373955_0005303 3300035172 Bacteria 5788
197 Ga0373955_0203720 3300035172 Bacteria 1178
198 Ga0373935_0079494 3300035692 Bacteria 2129
199 Ga0373927_0003122 3300035695 Bacteria 11979
200 Ga0373927_0003258 3300035695 Bacteria 11680
201 Ga0373927_0102663 3300035695 Bacteria 1860
202 Ga0373927_0152258 3300035695 Bacteria 1514
203 Ga0373933_0018249 3300035724 Bacteria 3944
204 Ga0373933_0133434 3300035724 Unclassified 1563
205 Ga0373933_0337982 3300035724 Bacteria 977
206 Ga0373947_0013928 3300035725 Unclassified 4611
207 Ga0373947_0115678 3300035725 Unclassified 1700
208 Ga0373937_0007604 3300036401 Bacteria 9388
209 Ga0373937_0012565 3300036401 Bacteria 7449
210 Ga0373937_0038353 3300036401 Bacteria 4365
211 Ga0373937_0462268 3300036401 Bacteria 1205
212 Ga0373925_0011270 3300037068 Bacteria 6485
213 Ga0373925_0028728 3300037068 Unclassified 4076
214 Ga0373925_0053147 3300037068 Bacteria 3027
215 Ga0373925_0069476 3300037068 Unclassified 2661
216 Ga0373925_0102895 3300037068 Unclassified 2198
217 Ga0373925_0518604 3300037068 Bacteria 979
218 Ga0395905_0686805 3300037471 Unclassified 926
219 Ga0436364_0174513 3300037853 Bacteria 1989
220 Ga0436363_0598461 3300039450 Bacteria 4899
221 Ga0495592_0031438 3300046454 Bacteria 4012
222 Ga0495629_0345800 3300046459 Bacteria 1015
223 Ga0495653_0189838 3300046463 Unclassified 1403
224 Ga0495580_0001507 3300046472 Bacteria 20476
225 Ga0495580_0011257 3300046472 Bacteria 6922
226 Ga0495580_0023301 3300046472 Unclassified 4549
227 Ga0495580_0078426 3300046472 Unclassified 2304
228 Ga0495580_0079247 3300046472 Bacteria 2291
229 Ga0495580_0080965 3300046472 Bacteria 2263
230 Ga0495580_0247750 3300046472 Bacteria 1220
231 Ga0495664_0262091 3300046477 Bacteria 1045
232 Ga0495608_0230934 3300046511 Bacteria 1158
233 Ga0495628_0226039 3300046516 Unclassified 1404
234 Ga0495652_0035313 3300046529 Bacteria 4352
235 Ga0495665_0008558 3300046531 Bacteria 5552
236 Ga0495665_0059264 3300046531 Unclassified 2021
237 Ga0495665_0061873 3300046531 Bacteria 1977
238 Ga0495665_0085468 3300046531 Bacteria 1658
239 Ga0495665_0134106 3300046531 Bacteria 1296
240 Ga0495587_0004473 3300046536 Bacteria 9197
241 Ga0495667_0136085 3300046559 Unclassified 1584
242 Ga0495667_0157968 3300046559 Bacteria 1459
243 Ga0495599_0172156 3300046678 Bacteria 1336
244 Ga0495623_0049753 3300046679 Bacteria 2656
245 Ga0495669_0022873 3300046684 Bacteria 2717
246 Ga0495613_0310708 3300046689 Bacteria 1090
247 Ga0495604_0089763 3300047317 Unclassified 2284
248 Ga0495674_0018931 3300047319 Bacteria 6404
249 Ga0495674_0336911 3300047319 Bacteria 1226
250 Ga0495684_0056376 3300047471 Bacteria 2996
251 Ga0495684_0142534 3300047471 Bacteria 1796
252 Ga0495602_0082147 3300048088 Bacteria 2705
253 Ga0495602_0084882 3300048088 Bacteria 2648
254 Ga0501031_0004385 3300049568 Bacteria 9143
255 Ga0501032_0003304 3300049569 Bacteria 12400
256 Ga0501034_0069505 3300049571 Unclassified 3532
257 Ga0501034_0221546 3300049571 Bacteria 1844
258 Ga0501036_0000288 3300049572 Bacteria 34814
259 Ga0501037_0013268 3300049573 Bacteria 6071
260 Ga0501038_0008687 3300049574 Bacteria 9326
261 Ga0501040_0188722 3300049576 Unclassified 1462
262 Ga0501043_0000890 3300049579 Bacteria 26517
263 Ga0501046_0001257 3300049580 Bacteria 24532
264 Ga0501047_0020781 3300049581 Bacteria 6306
265 Ga0501048_0235358 3300049582 Unclassified 1299
266 Ga0501067_0002519 3300049583 Bacteria 10120
267 Ga0501068_0009108 3300049584 Bacteria 5540
268 Ga0501070_0016867 3300049586 Bacteria 6128
269 Ga0501072_0000827 3300049588 Bacteria 22786
270 Ga0501073_0005398 3300049589 Bacteria 9575
271 Ga0501074_0010576 3300049590 Bacteria 6698
272 Ga0501075_0469156 3300049591 Bacteria 960
273 Ga0501076_0096350 3300049592 Unclassified 2383
274 Ga0501077_0005779 3300049593 Bacteria 7535
275 Ga0501079_0001395 3300049741 Bacteria 17026
276 Ga0501080_0075521 3300049742 Unclassified 3134
277 Ga0501044_0022375 3300049823 Bacteria 6737
278 nmdc:mga08x19_3221_c1 3300050514 Bacteria 9791
279 nmdc:mga0a205_299467_c1 3300050515 Unclassified 1481
280 Ga0495612_0056391 3300053078 Bacteria 1621
281 Ga0501084_0007983 3300054114 Bacteria 8713
282 Ga0501082_0000185 3300060353 Bacteria 54029
283 Ga0501082_0002772 3300060353 Bacteria 15313

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046684 Ga0495669_0022873 Ga0495669_0022873_1801_2577 255
2 3300005467 Ga0070706_100053031 Ga0070706_1000530312 256
3 3300025906 Ga0207699_10092309 Ga0207699_100923091 256
4 3300025920 Ga0207649_10075607 Ga0207649_100756072 259
5 3300031344 Ga0265316_10174483 Ga0265316_101744831 260
6 3300031711 Ga0265314_10003587 Ga0265314_1000358713 260
7 3300047317 Ga0495604_0089763 Ga0495604_0089763_491_1288 262
8 3300009093 Ga0105240_10176330 Ga0105240_101763303 266
9 3300009147 Ga0114129_10426018 Ga0114129_104260183 266
10 3300009174 Ga0105241_10161078 Ga0105241_101610782 266
11 3300009551 Ga0105238_10152090 Ga0105238_101520902 266
12 3300049591 Ga0501075_0469156 Ga0501075_0469156_14_889 266
13 3300037068 Ga0373925_0053147 Ga0373925_0053147_2147_2983 269
14 3300005329 Ga0070683_100348542 Ga0070683_1003485423 271
15 3300025944 Ga0207661_10312404 Ga0207661_103124042 271
16 3300049571 Ga0501034_0069505 Ga0501034_0069505_35_862 272
17 3300049582 Ga0501048_0235358 Ga0501048_0235358_438_1265 272
18 3300049586 Ga0501070_0016867 Ga0501070_0016867_35_862 272
19 3300049741 Ga0501079_0001395 Ga0501079_0001395_16165_16992 272
20 3300028381 Ga0268264_10527883 Ga0268264_105278832 273
21 3300046463 Ga0495653_0189838 Ga0495653_0189838_128_967 276
22 3300046559 Ga0495667_0136085 Ga0495667_0136085_449_1288 276
23 3300035695 Ga0373927_0152258 Ga0373927_0152258_560_1405 278
24 3300037068 Ga0373925_0069476 Ga0373925_0069476_1017_1862 278
25 3300005436 Ga0070713_100394222 Ga0070713_1003942222 280
26 3300037471 Ga0395905_0686805 Ga0395905_0686805_55_912 280
27 3300035111 Ga0373923_0050369 Ga0373923_0050369_82_966 282
28 3300035118 Ga0373954_0056694 Ga0373954_0056694_399_1283 282
29 3300035119 Ga0373956_0140071 Ga0373956_0140071_136_1020 282
30 3300035171 Ga0373946_0088543 Ga0373946_0088543_22_906 282
31 3300035172 Ga0373955_0203720 Ga0373955_0203720_164_1048 282
32 3300035695 Ga0373927_0003122 Ga0373927_0003122_2518_3402 282
33 3300035724 Ga0373933_0337982 Ga0373933_0337982_63_947 282
34 3300036401 Ga0373937_0038353 Ga0373937_0038353_1024_1908 282
35 3300046472 Ga0495580_0011257 Ga0495580_0011257_4214_5098 282
36 3300046511 Ga0495608_0230934 Ga0495608_0230934_92_976 282
37 3300046531 Ga0495665_0085468 Ga0495665_0085468_445_1329 282
38 3300047319 Ga0495674_0336911 Ga0495674_0336911_33_917 282
39 3300047471 Ga0495684_0142534 Ga0495684_0142534_334_1218 282
40 3300005434 Ga0070709_10401162 Ga0070709_104011621 285
41 3300005563 Ga0068855_100033630 Ga0068855_1000336306 285
42 3300006852 Ga0075433_10238986 Ga0075433_102389862 285
43 3300010375 Ga0105239_10307227 Ga0105239_103072272 285
44 3300013105 Ga0157369_10583884 Ga0157369_105838842 285
45 3300014969 Ga0157376_10450842 Ga0157376_104508421 285
46 3300025949 Ga0207667_10114077 Ga0207667_101140773 285
47 3300036401 Ga0373937_0462268 Ga0373937_0462268_241_1134 285
48 3300050515 nmdc:mga0a205_299467_c1 nmdc:mga0a205_299467_c1_523_1389 285
49 3300005548 Ga0070665_100285654 Ga0070665_1002856543 286
50 3300005842 Ga0068858_100130275 Ga0068858_1001302752 286
51 3300009093 Ga0105240_10025832 Ga0105240_100258324 286
52 3300009545 Ga0105237_10543693 Ga0105237_105436932 286
53 3300009551 Ga0105238_10081616 Ga0105238_100816163 286
54 3300009553 Ga0105249_10171049 Ga0105249_101710492 286
55 3300010375 Ga0105239_10593261 Ga0105239_105932611 286
56 3300013104 Ga0157370_10177464 Ga0157370_101774642 286
57 3300014325 Ga0163163_10011702 Ga0163163_100117022 286
58 3300025924 Ga0207694_10092048 Ga0207694_100920483 286
59 3300026035 Ga0207703_10106045 Ga0207703_101060453 286
60 3300049568 Ga0501031_0004385 Ga0501031_0004385_7133_8014 286
61 3300049569 Ga0501032_0003304 Ga0501032_0003304_5947_6828 286
62 3300049572 Ga0501036_0000288 Ga0501036_0000288_22840_23721 286
63 3300049573 Ga0501037_0013268 Ga0501037_0013268_4987_5868 286
64 3300049574 Ga0501038_0008687 Ga0501038_0008687_7606_8487 286
65 3300049576 Ga0501040_0188722 Ga0501040_0188722_443_1324 286
66 3300049579 Ga0501043_0000890 Ga0501043_0000890_1337_2218 286
67 3300049580 Ga0501046_0001257 Ga0501046_0001257_14332_15213 286
68 3300049581 Ga0501047_0020781 Ga0501047_0020781_1048_1929 286
69 3300049583 Ga0501067_0002519 Ga0501067_0002519_6264_7145 286
70 3300049584 Ga0501068_0009108 Ga0501068_0009108_3320_4201 286
71 3300049588 Ga0501072_0000827 Ga0501072_0000827_2976_3857 286
72 3300049589 Ga0501073_0005398 Ga0501073_0005398_204_1085 286
73 3300049590 Ga0501074_0010576 Ga0501074_0010576_639_1520 286
74 3300049592 Ga0501076_0096350 Ga0501076_0096350_873_1754 286
75 3300049593 Ga0501077_0005779 Ga0501077_0005779_3599_4480 286
76 3300049742 Ga0501080_0075521 Ga0501080_0075521_1615_2496 286
77 3300049823 Ga0501044_0022375 Ga0501044_0022375_5418_6299 286
78 3300054114 Ga0501084_0007983 Ga0501084_0007983_291_1172 286
79 3300060353 Ga0501082_0000185 Ga0501082_0000185_30171_31040 286
80 3300060353 Ga0501082_0002772 Ga0501082_0002772_9143_10024 286
81 3300005617 Ga0068859_100074304 Ga0068859_1000743043 287
82 3300006931 Ga0097620_100074304 Ga0097620_1000743043 287
83 3300031344 Ga0265316_10006136 Ga0265316_100061365 287
84 3300035724 Ga0373933_0018249 Ga0373933_0018249_840_1721 287
85 3300036401 Ga0373937_0012565 Ga0373937_0012565_3230_4111 287
86 3300046477 Ga0495664_0262091 Ga0495664_0262091_24_905 287
87 3300005434 Ga0070709_10029739 Ga0070709_100297393 288
88 3300028800 Ga0265338_10110212 Ga0265338_101102122 288
89 3300030760 Ga0265762_1021492 Ga0265762_10214921 288
90 3300031238 Ga0265332_10018691 Ga0265332_100186912 288
91 3300031240 Ga0265320_10050050 Ga0265320_100500502 288
92 3300031241 Ga0265325_10032117 Ga0265325_100321172 288
93 3300031242 Ga0265329_10016489 Ga0265329_100164894 288
94 3300031247 Ga0265340_10012381 Ga0265340_100123815 288
95 3300031249 Ga0265339_10079008 Ga0265339_100790083 288
96 3300031344 Ga0265316_10008142 Ga0265316_100081427 288
97 3300031344 Ga0265316_10054798 Ga0265316_100547984 288
98 3300031344 Ga0265316_10126807 Ga0265316_101268072 288
99 3300031711 Ga0265314_10005847 Ga0265314_100058479 288
100 3300031711 Ga0265314_10068041 Ga0265314_100680411 288
101 3300005459 Ga0068867_100233868 Ga0068867_1002338682 289
102 3300006028 Ga0070717_10071636 Ga0070717_100716363 289
103 3300009093 Ga0105240_10047940 Ga0105240_100479404 289
104 3300009553 Ga0105249_10186783 Ga0105249_101867833 289
105 3300025913 Ga0207695_10095046 Ga0207695_100950463 289
106 3300035113 Ga0373936_0101763 Ga0373936_0101763_86_967 289
107 3300005329 Ga0070683_100032520 Ga0070683_1000325205 290
108 3300005439 Ga0070711_100190206 Ga0070711_1001902062 290
109 3300005439 Ga0070711_100277069 Ga0070711_1002770691 290
110 3300005535 Ga0070684_100082246 Ga0070684_1000822463 290
111 3300005617 Ga0068859_100500739 Ga0068859_1005007391 290
112 3300005841 Ga0068863_100014167 Ga0068863_1000141676 290
113 3300006237 Ga0097621_100107340 Ga0097621_1001073403 290
114 3300006358 Ga0068871_100059284 Ga0068871_1000592842 290
115 3300006931 Ga0097620_100500728 Ga0097620_1005007282 290
116 3300009098 Ga0105245_10004465 Ga0105245_100044653 290
117 3300009098 Ga0105245_10178746 Ga0105245_101787462 290
118 3300009177 Ga0105248_10461969 Ga0105248_104619692 290
119 3300010375 Ga0105239_10168079 Ga0105239_101680793 290
120 3300013297 Ga0157378_10736597 Ga0157378_107365971 290
121 3300014325 Ga0163163_10030972 Ga0163163_100309725 290
122 3300021377 Ga0213874_10012246 Ga0213874_100122462 290
123 3300025916 Ga0207663_10079080 Ga0207663_100790802 290
124 3300025927 Ga0207687_10027264 Ga0207687_100272644 290
125 3300025944 Ga0207661_10017675 Ga0207661_100176756 290
126 3300028800 Ga0265338_10157788 Ga0265338_101577883 290
127 3300031247 Ga0265340_10023649 Ga0265340_100236493 290
128 3300031344 Ga0265316_10002786 Ga0265316_1000278610 290
129 3300031344 Ga0265316_10028580 Ga0265316_100285804 290
130 3300039450 Ga0436363_0598461 Ga0436363_0598461_1179_2060 290
131 3300046529 Ga0495652_0035313 Ga0495652_0035313_718_1599 290
132 3300046559 Ga0495667_0157968 Ga0495667_0157968_458_1339 290
133 3300047471 Ga0495684_0056376 Ga0495684_0056376_1664_2545 290
134 3300005329 Ga0070683_100463204 Ga0070683_1004632042 291
135 3300005445 Ga0070708_100288717 Ga0070708_1002887171 291
136 3300005458 Ga0070681_10002851 Ga0070681_100028515 291
137 3300005530 Ga0070679_100137550 Ga0070679_1001375502 291
138 3300005535 Ga0070684_100246519 Ga0070684_1002465192 291
139 3300005539 Ga0068853_100155107 Ga0068853_1001551072 291
140 3300005546 Ga0070696_100000854 Ga0070696_10000085419 291
141 3300005548 Ga0070665_100295627 Ga0070665_1002956273 291
142 3300006237 Ga0097621_100138979 Ga0097621_1001389792 291
143 3300006358 Ga0068871_100116672 Ga0068871_1001166722 291
144 3300006914 Ga0075436_100001704 Ga0075436_10000170412 291
145 3300009093 Ga0105240_10007906 Ga0105240_100079064 291
146 3300009174 Ga0105241_10425218 Ga0105241_104252182 291
147 3300009176 Ga0105242_10132073 Ga0105242_101320732 291
148 3300009177 Ga0105248_10097850 Ga0105248_100978502 291
149 3300009545 Ga0105237_10002819 Ga0105237_1000281914 291
150 3300010375 Ga0105239_10109418 Ga0105239_101094184 291
151 3300013105 Ga0157369_10225196 Ga0157369_102251962 291
152 3300014745 Ga0157377_10233150 Ga0157377_102331502 291
153 3300014969 Ga0157376_10198754 Ga0157376_101987542 291
154 3300021384 Ga0213876_10015500 Ga0213876_100155003 291
155 3300025912 Ga0207707_10003520 Ga0207707_100035205 291
156 3300025912 Ga0207707_10207054 Ga0207707_102070542 291
157 3300025913 Ga0207695_10002930 Ga0207695_100029306 291
158 3300025921 Ga0207652_10103958 Ga0207652_101039582 291
159 3300025928 Ga0207700_10045842 Ga0207700_100458423 291
160 3300025941 Ga0207711_10126358 Ga0207711_101263582 291
161 3300025944 Ga0207661_10106128 Ga0207661_101061282 291
162 3300026023 Ga0207677_10107217 Ga0207677_101072172 291
163 3300026088 Ga0207641_10271368 Ga0207641_102713682 291
164 3300031241 Ga0265325_10030509 Ga0265325_100305093 291
165 3300031712 Ga0265342_10037309 Ga0265342_100373094 291
166 3300035089 Ga0373944_0029078 Ga0373944_0029078_484_1374 291
167 3300035692 Ga0373935_0079494 Ga0373935_0079494_344_1234 291
168 3300035695 Ga0373927_0003258 Ga0373927_0003258_3477_4427 291
169 3300035695 Ga0373927_0102663 Ga0373927_0102663_517_1407 291
170 3300035725 Ga0373947_0013928 Ga0373947_0013928_277_1167 291
171 3300035725 Ga0373947_0115678 Ga0373947_0115678_348_1298 291
172 3300037068 Ga0373925_0011270 Ga0373925_0011270_5137_6021 291
173 3300037068 Ga0373925_0028728 Ga0373925_0028728_1002_1889 291
174 3300037068 Ga0373925_0518604 Ga0373925_0518604_73_960 291
175 3300046459 Ga0495629_0345800 Ga0495629_0345800_13_900 291
176 3300046472 Ga0495580_0001507 Ga0495580_0001507_16369_17256 291
177 3300046472 Ga0495580_0023301 Ga0495580_0023301_2312_3199 291
178 3300046472 Ga0495580_0078426 Ga0495580_0078426_1173_2060 291
179 3300046472 Ga0495580_0079247 Ga0495580_0079247_698_1585 291
180 3300046472 Ga0495580_0080965 Ga0495580_0080965_655_1539 291
181 3300046472 Ga0495580_0247750 Ga0495580_0247750_160_1050 291
182 3300046531 Ga0495665_0008558 Ga0495665_0008558_1276_2166 291
183 3300046531 Ga0495665_0059264 Ga0495665_0059264_944_1831 291
184 3300046531 Ga0495665_0134106 Ga0495665_0134106_192_1079 291
185 3300046679 Ga0495623_0049753 Ga0495623_0049753_544_1431 291
186 3300046689 Ga0495613_0310708 Ga0495613_0310708_160_1047 291
187 3300047319 Ga0495674_0018931 Ga0495674_0018931_1109_1999 291
188 3300050514 nmdc:mga08x19_3221_c1 nmdc:mga08x19_3221_c1_1114_2001 291
189 3300053078 Ga0495612_0056391 Ga0495612_0056391_707_1597 291
190 3300009176 Ga0105242_10007899 Ga0105242_100078997 292
191 3300009177 Ga0105248_10414536 Ga0105248_104145362 292
192 3300013306 Ga0163162_10385029 Ga0163162_103850292 292
193 3300025934 Ga0207686_10042865 Ga0207686_100428652 292
194 3300028379 Ga0268266_10095668 Ga0268266_100956682 292
195 3300049571 Ga0501034_0221546 Ga0501034_0221546_863_1753 292
196 3300005336 Ga0070680_100234336 Ga0070680_1002343361 293
197 3300005535 Ga0070684_100160339 Ga0070684_1001603393 293
198 3300005563 Ga0068855_100177636 Ga0068855_1001776361 293
199 3300005577 Ga0068857_100131383 Ga0068857_1001313834 293
200 3300005614 Ga0068856_100031348 Ga0068856_1000313483 293
201 3300006881 Ga0068865_100493961 Ga0068865_1004939611 293
202 3300009093 Ga0105240_10001321 Ga0105240_1000132119 293
203 3300009093 Ga0105240_10217609 Ga0105240_102176093 293
204 3300009545 Ga0105237_10006646 Ga0105237_1000664616 293
205 3300010375 Ga0105239_10036796 Ga0105239_100367963 293
206 3300011119 Ga0105246_10297388 Ga0105246_102973881 293
207 3300013104 Ga0157370_10003897 Ga0157370_100038973 293
208 3300013105 Ga0157369_10010935 Ga0157369_100109355 293
209 3300013296 Ga0157374_10049155 Ga0157374_100491553 293
210 3300014325 Ga0163163_10203923 Ga0163163_102039232 293
211 3300014969 Ga0157376_10006963 Ga0157376_100069634 293
212 3300025912 Ga0207707_10119047 Ga0207707_101190474 293
213 3300025913 Ga0207695_10002645 Ga0207695_100026455 293
214 3300025914 Ga0207671_10024725 Ga0207671_100247255 293
215 3300025917 Ga0207660_10451819 Ga0207660_104518191 293
216 3300025944 Ga0207661_10079358 Ga0207661_100793583 293
217 3300026035 Ga0207703_10413499 Ga0207703_104134992 293
218 3300026089 Ga0207648_10094960 Ga0207648_100949604 293
219 3300026116 Ga0207674_10090021 Ga0207674_100900213 293
220 3300035724 Ga0373933_0133434 Ga0373933_0133434_188_1069 293
221 3300037068 Ga0373925_0102895 Ga0373925_0102895_65_946 293
222 3300037853 Ga0436364_0174513 Ga0436364_0174513_19_912 293
223 3300046454 Ga0495592_0031438 Ga0495592_0031438_3022_3903 293
224 3300046516 Ga0495628_0226039 Ga0495628_0226039_12_893 293
225 3300046536 Ga0495587_0004473 Ga0495587_0004473_5883_6764 293
226 3300048088 Ga0495602_0082147 Ga0495602_0082147_1362_2243 293
227 3300009545 Ga0105237_10067014 Ga0105237_100670144 294
228 3300013104 Ga0157370_10347666 Ga0157370_103476662 294
229 3300014969 Ga0157376_10393059 Ga0157376_103930591 294
230 3300025914 Ga0207671_10112137 Ga0207671_101121373 294
231 3300031595 Ga0265313_10002398 Ga0265313_100023987 295
232 3300005563 Ga0068855_100046091 Ga0068855_1000460913 296
233 3300006237 Ga0097621_100402785 Ga0097621_1004027852 296
234 3300014969 Ga0157376_10129203 Ga0157376_101292033 296
235 3300046531 Ga0495665_0061873 Ga0495665_0061873_94_999 296
236 3300009177 Ga0105248_10007657 Ga0105248_100076573 297
237 3300009551 Ga0105238_10157922 Ga0105238_101579223 297
238 3300009553 Ga0105249_10004324 Ga0105249_1000432411 297
239 3300011119 Ga0105246_10001366 Ga0105246_100013664 297
240 3300013308 Ga0157375_10001761 Ga0157375_100017617 297
241 3300014969 Ga0157376_10256357 Ga0157376_102563573 297
242 3300025927 Ga0207687_10003742 Ga0207687_100037423 297
243 3300025961 Ga0207712_10020268 Ga0207712_100202684 297
244 3300026035 Ga0207703_10026742 Ga0207703_100267425 297
245 3300005535 Ga0070684_100000231 Ga0070684_10000023139 298
246 3300035086 Ga0373934_0060831 Ga0373934_0060831_259_1170 300
247 3300035113 Ga0373936_0049607 Ga0373936_0049607_304_1215 300
248 3300035117 Ga0373953_0133021 Ga0373953_0133021_15_926 300
249 3300035118 Ga0373954_0003632 Ga0373954_0003632_5446_6357 300
250 3300035172 Ga0373955_0005303 Ga0373955_0005303_638_1549 300
251 3300036401 Ga0373937_0007604 Ga0373937_0007604_121_1032 300
252 3300046678 Ga0495599_0172156 Ga0495599_0172156_349_1260 300
253 3300048088 Ga0495602_0084882 Ga0495602_0084882_1605_2516 300
254 3300005327 Ga0070658_10166589 Ga0070658_101665893 303
255 3300005329 Ga0070683_100001856 Ga0070683_10000185614 303
256 3300005336 Ga0070680_100004843 Ga0070680_1000048436 303
257 3300005341 Ga0070691_10002197 Ga0070691_100021973 303
258 3300005344 Ga0070661_100045992 Ga0070661_1000459924 303
259 3300005458 Ga0070681_10001551 Ga0070681_1000155115 303
260 3300005530 Ga0070679_100001406 Ga0070679_10000140620 303
261 3300005563 Ga0068855_100017086 Ga0068855_10001708610 303
262 3300005564 Ga0070664_100174611 Ga0070664_1001746113 303
263 3300005577 Ga0068857_100000274 Ga0068857_10000027419 303
264 3300005614 Ga0068856_100001029 Ga0068856_10000102916 303
265 3300005616 Ga0068852_100018067 Ga0068852_1000180673 303
266 3300009093 Ga0105240_10007445 Ga0105240_100074453 303
267 3300009545 Ga0105237_10005322 Ga0105237_100053227 303
268 3300009551 Ga0105238_10005715 Ga0105238_100057155 303
269 3300010375 Ga0105239_10033684 Ga0105239_100336843 303
270 3300013104 Ga0157370_10004390 Ga0157370_100043904 303
271 3300013105 Ga0157369_10000903 Ga0157369_1000090338 303
272 3300013307 Ga0157372_10008144 Ga0157372_100081448 303
273 3300025912 Ga0207707_10000705 Ga0207707_1000070524 303
274 3300025913 Ga0207695_10000843 Ga0207695_1000084318 303
275 3300025917 Ga0207660_10115681 Ga0207660_101156811 303
276 3300025921 Ga0207652_10015720 Ga0207652_100157206 303
277 3300025924 Ga0207694_10000435 Ga0207694_1000043515 303
278 3300025944 Ga0207661_10001452 Ga0207661_100014525 303
279 3300025945 Ga0207679_10236571 Ga0207679_102365713 303
280 3300025949 Ga0207667_10002003 Ga0207667_1000200320 303
281 3300026078 Ga0207702_10001718 Ga0207702_1000171824 303
282 3300026116 Ga0207674_10000110 Ga0207674_1000011088 303
283 3300026142 Ga0207698_10061357 Ga0207698_100613573 303

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04321

RmlD_sub_bind

RmlD substrate binding domain

2

293

0.96

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

4

192

0.9

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

21

185

0.89

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

1

110

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9647 3 290
3sc6-assembly2.cif.gz_B 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9575 2 289
3sc6-assembly5.cif.gz_E 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.957 1 289
3sc6-assembly6.cif.gz_F 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.956 2 289
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9445 3 290
ID Description Score Start End Superfamily
1vl0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9599 4 221 3.40.50.720
6bwlA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9425 3 149 3.40.50.720
3rp8A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9408 1 33 3.50.50.60
3sc6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9361 2 279 3.40.50.720
3sc6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9143 2 279 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A357D7T4-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9885 44 134 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A2V8QMZ8-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9802 3 132 GO:0008831
GO:0019305
AF-A0A660Y678-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9791 6 148 GO:0008831
GO:0019305
AF-A0A7C1TNK7-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9777 3 134 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A2E7XJY8-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9765 3 118 GO:0005829
GO:0008831
GO:0009243
GO:0019305
GO:0045226

Feature Viewer

pLDDT pTM Quality
91.61 0.91 High
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Predicted Structure (AlphaFold2)

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