F381066

General Info

Members Datasets Scaffolds Average Seq Length
276 185 274 360

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10031043|Ga0105240_100310436
Length 420
Sequence MRASCACLRGRPKRSRRRPNCSPSSPPRTCHAAHCGAIQPILRIPALTADAIAQRVRGAVNQEMSMLTPRLIPKWLPACMTPVANGMSYVAKSLVSDINTSSNPYTSPNVDANLVNAWGIAFNPQGFVWVANNHTSTSTLYDGNGVPQSLVVSIPAGNAGDAAPTGIVFNSTSGFAVTQAGVSGASAFIFVGEAGTVSGWSPAVNRTNAVKVVDRSASSTVYKGLAIATQGAATFLYAADFHNGVVDVYDSNFAPVITAGAFTDANLPAGFAPFGIQAIGGLIYVSYAKREAQGDDEEAGAGLGAVDVFDTAGTLVKRLIPAGGKLNAPWGIAMAPANFGKFSNALLVGNFGDGRINAFDAATGASLGTISQSDGTPIAVDGLWGIAFGNGLNSQPTNTLFYAAGPAGETHGVYGRIDVQ

Samples

Sample ID Description Type Environment
1 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
2 2919476304 Duganella sp. 3397 Isolate Unclassified
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
68 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
69 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
74 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
113 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
114 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
115 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
123 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
124 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
128 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
129 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
130 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
134 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
135 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
136 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
137 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
138 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
139 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
140 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
145 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
146 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
147 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
148 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
149 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
152 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
153 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
154 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
155 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
156 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
159 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
160 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
161 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
162 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
163 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
164 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
165 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
166 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
167 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
168 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
169 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
170 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
171 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
172 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
173 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
174 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
175 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
178 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
179 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
180 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.41
Nodule 0
Rhizoplane 3.26
Rhizosphere 78.26
Stem 0
Stem Tuber 0
Unclassified 5.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000014 3300002773 Bacteria 123630
2 JGI25150J39212_1000145 3300002774 Bacteria 40085
3 JGI25153J46596_10004408 3300003215 Bacteria 7597
4 Ga0055526_1000569 3300003771 Bacteria 29084
5 Ga0055537_1000004 3300003773 Bacteria 167383
6 Ga0055524_1000462 3300003775 Bacteria 32912
7 Ga0055524_1001034 3300003775 Bacteria 17195
8 Ga0055524_1003216 3300003775 Bacteria 8013
9 Ga0055534_1000216 3300003784 Bacteria 42623
10 Ga0055528_1000378 3300003790 Bacteria 36269
11 JGI25405J52794_10020282 3300003911 Bacteria 1338
12 Ga0065715_10105655 3300005293 Bacteria 2879
13 Ga0065715_10202805 3300005293 Unclassified 1352
14 Ga0070676_10005784 3300005328 Bacteria 6592
15 Ga0070677_10001769 3300005333 Bacteria 6831
16 Ga0068869_100034810 3300005334 Bacteria 3566
17 Ga0068868_100075969 3300005338 Bacteria 2685
18 Ga0068868_100154304 3300005338 Bacteria 1893
19 Ga0070668_100030079 3300005347 Bacteria 4128
20 Ga0070669_100018134 3300005353 Bacteria 5028
21 Ga0070671_100035873 3300005355 Bacteria 4110
22 Ga0070671_100127645 3300005355 Bacteria 2142
23 Ga0070674_100010150 3300005356 Bacteria 5674
24 Ga0070674_100024132 3300005356 Bacteria 3944
25 Ga0070673_100014170 3300005364 Bacteria 5542
26 Ga0070673_100030148 3300005364 Bacteria 4054
27 Ga0070667_100071896 3300005367 Bacteria 2947
28 Ga0070663_100001376 3300005455 Bacteria 13314
29 Ga0070678_100138711 3300005456 Bacteria 1943
30 Ga0070662_100093195 3300005457 Bacteria 2265
31 Ga0068867_100001396 3300005459 Bacteria 16708
32 Ga0068867_100042483 3300005459 Bacteria 3326
33 Ga0070706_100000246 3300005467 Bacteria 66106
34 Ga0070699_100062153 3300005518 Bacteria 3236
35 Ga0068853_100079766 3300005539 Bacteria 2863
36 Ga0068853_100186731 3300005539 Bacteria 1882
37 Ga0070672_100064180 3300005543 Bacteria 2901
38 Ga0070693_100169612 3300005547 Bacteria 1397
39 Ga0070665_100058084 3300005548 Bacteria 3879
40 Ga0070665_100059178 3300005548 Bacteria 3841
41 Ga0070664_100235715 3300005564 Bacteria 1641
42 Ga0068857_100006213 3300005577 Bacteria 10214
43 Ga0068854_100195259 3300005578 Bacteria 1588
44 Ga0068856_100205138 3300005614 Bacteria 1986
45 Ga0068856_100467283 3300005614 Bacteria 1282
46 Ga0068852_100056365 3300005616 Bacteria 3396
47 Ga0068859_100109554 3300005617 Bacteria 2823
48 Ga0068864_100048197 3300005618 Bacteria 3662
49 Ga0068861_100349125 3300005719 Unclassified 1297
50 Ga0068851_10002480 3300005834 Bacteria 8109
51 Ga0068870_10010396 3300005840 Bacteria 4274
52 Ga0068870_10119885 3300005840 Bacteria 1514
53 Ga0068863_100015145 3300005841 Bacteria 7408
54 Ga0068858_100002592 3300005842 Bacteria 18197
55 Ga0068860_100008860 3300005843 Bacteria 10025
56 Ga0081455_10000528 3300005937 Bacteria 49547
57 Ga0075367_10000508 3300006178 Bacteria 14680
58 Ga0075367_10062700 3300006178 Bacteria 2221
59 Ga0075369_10039471 3300006186 Bacteria 2016
60 Ga0075366_10000892 3300006195 Bacteria 14429
61 Ga0075366_10028236 3300006195 Bacteria 3293
62 Ga0075370_10000729 3300006353 Bacteria 13101
63 Ga0075370_10073771 3300006353 Bacteria 1955
64 Ga0075370_10086540 3300006353 Bacteria 1805
65 Ga0068865_100030816 3300006881 Bacteria 3570
66 Ga0097620_100109553 3300006931 Bacteria 2823
67 Ga0105240_10031043 3300009093 Bacteria 6934
68 Ga0105242_10099885 3300009176 Bacteria 2457
69 Ga0105248_10005877 3300009177 Bacteria 13486
70 Ga0105248_10019180 3300009177 Bacteria 7566
71 Ga0105248_10072356 3300009177 Bacteria 3875
72 Ga0105248_10150005 3300009177 Unclassified 2630
73 Ga0105248_10201386 3300009177 Bacteria 2243
74 Ga0105248_10294309 3300009177 Bacteria 1828
75 Ga0105237_10002284 3300009545 Bacteria 23834
76 Ga0105237_10002643 3300009545 Bacteria 22062
77 Ga0105238_10034450 3300009551 Bacteria 5152
78 Ga0105239_10000832 3300010375 Bacteria 43848
79 Ga0157378_10097206 3300013297 Unclassified 2684
80 Ga0163162_10025291 3300013306 Bacteria 5866
81 Ga0163162_10250794 3300013306 Bacteria 1902
82 Ga0157375_10003253 3300013308 Bacteria 14104
83 Ga0157375_10013310 3300013308 Bacteria 7317
84 Ga0157375_10014399 3300013308 Bacteria 7054
85 Ga0157375_10099393 3300013308 Bacteria 2989
86 Ga0163163_10125628 3300014325 Bacteria 2603
87 Ga0157380_10006892 3300014326 Bacteria 8035
88 Ga0157380_10434079 3300014326 Bacteria 1256
89 Ga0157377_10007507 3300014745 Bacteria 5268
90 Ga0157379_10001431 3300014968 Bacteria 19596
91 Ga0157379_10045439 3300014968 Bacteria 3919
92 Ga0157379_10125993 3300014968 Bacteria 2304
93 Ga0157376_10032652 3300014969 Bacteria 4182
94 Ga0157376_10070333 3300014969 Bacteria 2970
95 Ga0157376_10289661 3300014969 Bacteria 1545
96 Ga0207425_1000009 3300025245 Bacteria 593135
97 Ga0209129_1000061 3300025258 Bacteria 246061
98 Ga0209565_1000018 3300025263 Bacteria 460940
99 Ga0209565_1006621 3300025263 Unclassified 3226
100 Ga0209565_1014087 3300025263 Unclassified 1848
101 Ga0209673_1000090 3300025273 Bacteria 202223
102 Ga0209675_1000005 3300025291 Bacteria 849192
103 Ga0209564_1000078 3300025295 Bacteria 275766
104 Ga0209758_1000101 3300025297 Bacteria 225913
105 Ga0209256_1000142 3300025299 Bacteria 152245
106 Ga0209256_1000601 3300025299 Bacteria 49925
107 Ga0209051_1001482 3300025303 Bacteria 19733
108 Ga0207656_10004403 3300025321 Bacteria 4915
109 Ga0207682_10002634 3300025893 Bacteria 7987
110 Ga0207688_10037392 3300025901 Bacteria 2692
111 Ga0207645_10000759 3300025907 Bacteria 26825
112 Ga0207643_10010006 3300025908 Bacteria 5098
113 Ga0207684_10002337 3300025910 Bacteria 19212
114 Ga0207695_10150477 3300025913 Bacteria 2267
115 Ga0207695_10161043 3300025913 Bacteria 2175
116 Ga0207671_10010084 3300025914 Bacteria 7833
117 Ga0207681_10027783 3300025923 Bacteria 3661
118 Ga0207694_10008131 3300025924 Bacteria 7925
119 Ga0207650_10000525 3300025925 Bacteria 31391
120 Ga0207659_10000344 3300025926 Bacteria 27868
121 Ga0207644_10127898 3300025931 Bacteria 1941
122 Ga0207690_10190431 3300025932 Bacteria 1551
123 Ga0207706_10123168 3300025933 Bacteria 2281
124 Ga0207706_10218332 3300025933 Bacteria 1670
125 Ga0207669_10066909 3300025937 Bacteria 2236
126 Ga0207704_10013573 3300025938 Bacteria 4082
127 Ga0207691_10001440 3300025940 Bacteria 23714
128 Ga0207691_10002136 3300025940 Bacteria 19342
129 Ga0207691_10013300 3300025940 Bacteria 7885
130 Ga0207691_10019991 3300025940 Bacteria 6334
131 Ga0207691_10094220 3300025940 Bacteria 2680
132 Ga0207711_10028353 3300025941 Bacteria 4711
133 Ga0207711_10127763 3300025941 Unclassified 2276
134 Ga0207711_10133354 3300025941 Bacteria 2229
135 Ga0207711_10136214 3300025941 Bacteria 2206
136 Ga0207689_10121092 3300025942 Bacteria 2152
137 Ga0207679_10127055 3300025945 Bacteria 2039
138 Ga0207668_10025519 3300025972 Bacteria 3826
139 Ga0207640_10130402 3300025981 Bacteria 1816
140 Ga0207658_10015258 3300025986 Bacteria 5271
141 Ga0207677_10026277 3300026023 Bacteria 3648
142 Ga0207639_10027466 3300026041 Bacteria 4148
143 Ga0207639_10306909 3300026041 Bacteria 1405
144 Ga0207678_10001128 3300026067 Bacteria 24473
145 Ga0207641_10011057 3300026088 Bacteria 7404
146 Ga0207648_10002266 3300026089 Bacteria 20822
147 Ga0207648_10004061 3300026089 Bacteria 15185
148 Ga0207648_10020443 3300026089 Bacteria 5961
149 Ga0207648_10059532 3300026089 Bacteria 3331
150 Ga0207648_10102466 3300026089 Bacteria 2509
151 Ga0207648_10140840 3300026089 Bacteria 2125
152 Ga0207648_10180470 3300026089 Unclassified 1868
153 Ga0207648_10246101 3300026089 Bacteria 1593
154 Ga0207676_10116959 3300026095 Bacteria 2241
155 Ga0207674_10009257 3300026116 Bacteria 11289
156 Ga0207674_10017494 3300026116 Bacteria 7821
157 Ga0207683_10011435 3300026121 Bacteria 7574
158 Ga0207683_10104121 3300026121 Bacteria 2536
159 Ga0207683_10133181 3300026121 Bacteria 2236
160 Ga0268266_10054842 3300028379 Bacteria 3426
161 Ga0268264_10103528 3300028381 Bacteria 2479
162 Ga0307517_10000150 3300028786 Bacteria 110446
163 Ga0307517_10095617 3300028786 Bacteria 2388
164 Ga0307515_10129919 3300028794 Bacteria 2783
165 Ga0307515_10303858 3300028794 Bacteria 1278
166 Ga0307509_10000092 3300031507 Bacteria 124019
167 Ga0307509_10043721 3300031507 Bacteria 4845
168 Ga0307508_10001639 3300031616 Bacteria 24934
169 Ga0307514_10029335 3300031649 Bacteria 4426
170 Ga0265314_10008650 3300031711 Bacteria 8708
171 Ga0307516_10023992 3300031730 Bacteria 6238
172 Ga0307510_10001753 3300033180 Bacteria 24194
173 Ga0373931_0014153 3300035691 Bacteria 3895
174 Ga0373947_0146429 3300035725 Bacteria 1519
175 Ga0451853_3691459 3300041512 Bacteria 1353
176 Ga0466972_0011483 3300044658 Bacteria 4447
177 Ga0466965_0000094 3300044683 Bacteria 25653
178 Ga0466964_0000650 3300044706 Bacteria 11075
179 Ga0466968_0001696 3300044735 Bacteria 7935
180 Ga0466970_0003047 3300044765 Bacteria 8131
181 Ga0466959_0014961 3300045049 Bacteria 5654
182 Ga0495617_000014 3300046452 Bacteria 286979
183 Ga0495617_000045 3300046452 Bacteria 116918
184 Ga0495627_000061 3300046453 Bacteria 139366
185 Ga0495592_0003099 3300046454 Bacteria 11871
186 Ga0495590_0000005 3300046457 Bacteria 384276
187 Ga0495638_0026203 3300046460 Bacteria 3781
188 Ga0495650_0000019 3300046471 Bacteria 533849
189 Ga0495650_0007973 3300046471 Bacteria 6268
190 Ga0495605_0000110 3300046474 Bacteria 104425
191 Ga0495605_0024905 3300046474 Bacteria 3124
192 Ga0495584_0000002 3300046491 Bacteria 512179
193 Ga0495584_0000683 3300046491 Bacteria 22522
194 Ga0495585_0000003 3300046492 Bacteria 406344
195 Ga0495585_0016803 3300046492 Bacteria 4239
196 Ga0495585_0121649 3300046492 Bacteria 1380
197 Ga0495596_0001432 3300046500 Bacteria 13686
198 Ga0495607_0012933 3300046501 Bacteria 5488
199 Ga0495583_0002539 3300046506 Bacteria 15423
200 Ga0495606_0000526 3300046507 Bacteria 61953
201 Ga0495606_0004093 3300046507 Bacteria 14821
202 Ga0495616_0000348 3300046513 Bacteria 36455
203 Ga0495616_0002237 3300046513 Bacteria 12947
204 Ga0495616_0003062 3300046513 Bacteria 10831
205 Ga0495630_0063269 3300046517 Bacteria 2779
206 Ga0495631_0040687 3300046518 Bacteria 2058
207 Ga0495643_0000167 3300046522 Bacteria 104447
208 Ga0495643_0000868 3300046522 Bacteria 32233
209 Ga0495643_0020411 3300046522 Bacteria 3819
210 Ga0495643_0069056 3300046522 Bacteria 1858
211 Ga0495644_0000415 3300046523 Bacteria 19005
212 Ga0495644_0040871 3300046523 Bacteria 1747
213 Ga0495648_0000011 3300046524 Bacteria 299518
214 Ga0495648_0000799 3300046524 Bacteria 33303
215 Ga0495648_0008536 3300046524 Bacteria 8048
216 Ga0495663_0001103 3300046525 Bacteria 8735
217 Ga0495642_0000017 3300046528 Bacteria 111313
218 Ga0495609_0010651 3300046538 Bacteria 4400
219 Ga0495597_0000855 3300046542 Bacteria 23940
220 Ga0495597_0009890 3300046542 Bacteria 4690
221 Ga0495597_0020504 3300046542 Bacteria 3078
222 Ga0495633_0003045 3300046558 Bacteria 11416
223 Ga0495633_0005638 3300046558 Bacteria 7590
224 Ga0495656_0002234 3300046615 Bacteria 6400
225 Ga0495668_0000065 3300046616 Bacteria 178985
226 Ga0495668_0001350 3300046616 Bacteria 24083
227 Ga0495668_0028996 3300046616 Bacteria 3128
228 Ga0495611_0027446 3300046648 Bacteria 2488
229 Ga0495625_0025094 3300046660 Bacteria 4525
230 Ga0495661_0001503 3300046665 Bacteria 19416
231 Ga0495588_0029640 3300046674 Bacteria 2746
232 Ga0495658_0039300 3300046683 Bacteria 2625
233 Ga0495669_0003124 3300046684 Bacteria 6811
234 Ga0495624_0056437 3300046690 Bacteria 2471
235 Ga0495670_0000090 3300046691 Bacteria 40512
236 Ga0495670_0018271 3300046691 Bacteria 3452
237 Ga0495670_0089101 3300046691 Bacteria 1578
238 Ga0495671_0000068 3300046692 Bacteria 99674
239 Ga0495671_0100239 3300046692 Unclassified 1416
240 Ga0495589_0001875 3300046794 Bacteria 11906
241 Ga0495660_0018009 3300046810 Bacteria 4063
242 Ga0495660_0053134 3300046810 Bacteria 2200
243 Ga0495672_0017321 3300047320 Bacteria 4822
244 Ga0495676_0027876 3300047321 Bacteria 4838
245 Ga0495683_0052014 3300047323 Bacteria 2045
246 Ga0495687_000716 3300047443 Bacteria 36771
247 Ga0495687_010891 3300047443 Bacteria 4939
248 Ga0495687_010897 3300047443 Bacteria 4937
249 Ga0495677_0005593 3300047445 Bacteria 4761
250 Ga0495679_005959 3300047446 Bacteria 5332
251 Ga0495673_0098672 3300047469 Bacteria 1184
252 Ga0495681_0007834 3300047470 Bacteria 6761
253 Ga0495593_0033332 3300047673 Bacteria 2805
254 Ga0495615_0000806 3300048090 Bacteria 4393
255 Ga0495615_0007105 3300048090 Bacteria 2108
256 Ga0496102_0000166 3300048905 Bacteria 88956
257 Ga0496102_0000369 3300048905 Bacteria 54037
258 Ga0496103_0079727 3300048906 Bacteria 2058
259 Ga0496103_0105991 3300048906 Bacteria 1783
260 Ga0496103_0152699 3300048906 Bacteria 1479
261 Ga0496104_0120039 3300048907 Bacteria 2524
262 Ga0496104_0220703 3300048907 Bacteria 1808
263 Ga0496106_0126295 3300048909 Bacteria 2003
264 Ga0496111_0172046 3300048914 Bacteria 1609
265 Ga0496124_0093376 3300048927 Bacteria 2449
266 Ga0495678_003955 3300049459 Bacteria 8867
267 nmdc:mga0k408_66324_c1 3300050493 Unclassified 2103
268 nmdc:mga0k408_882_c1 3300050493 Bacteria 16437
269 nmdc:mga07m45_156775_c1 3300050496 Bacteria 1321
270 nmdc:mga07m45_3138_c1 3300050496 Bacteria 7921
271 nmdc:mga07m45_55682_c1 3300050496 Unclassified 2236
272 nmdc:mga08y16_131277_c1 3300050511 Bacteria 2604
273 Ga0500564_007006 3300053138 Bacteria 4752
274 Ga0500568_0020528 3300053139 Bacteria 2856

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046810 Ga0495660_0018009 Ga0495660_0018009_577_1437 262
2 3300005518 Ga0070699_100062153 Ga0070699_1000621534 308
3 3300044765 Ga0466970_0003047 Ga0466970_0003047_316_1557 311
4 3300045049 Ga0466959_0014961 Ga0466959_0014961_216_1457 311
5 3300041512 Ga0451853_3691459 Ga0451853_3691459_55_1155 313
6 3300047443 Ga0495687_010891 Ga0495687_010891_3969_4916 313
7 3300047443 Ga0495687_010897 Ga0495687_010897_3967_4914 313
8 3300005548 Ga0070665_100059178 Ga0070665_1000591783 314
9 3300048906 Ga0496103_0079727 Ga0496103_0079727_24_1163 314
10 3300046691 Ga0495670_0089101 Ga0495670_0089101_328_1428 317
11 3300048905 Ga0496102_0000166 Ga0496102_0000166_49657_50802 317
12 3300048906 Ga0496103_0105991 Ga0496103_0105991_42_1187 317
13 3300046538 Ga0495609_0010651 Ga0495609_0010651_2155_3309 318
14 3300009177 Ga0105248_10150005 Ga0105248_101500051 321
15 iso_pu_bacteria 2919476304 2919479590 325
16 3300006353 Ga0075370_10073771 Ga0075370_100737712 327
17 3300031711 Ga0265314_10008650 Ga0265314_100086507 327
18 3300046542 Ga0495597_0020504 Ga0495597_0020504_1620_2915 327
19 3300048927 Ga0496124_0093376 Ga0496124_0093376_437_1489 327
20 3300046457 Ga0495590_0000005 Ga0495590_0000005_257007_258056 328
21 3300046522 Ga0495643_0000167 Ga0495643_0000167_60640_61686 328
22 3300046524 Ga0495648_0008536 Ga0495648_0008536_3896_4900 328
23 3300046542 Ga0495597_0000855 Ga0495597_0000855_11581_12627 328
24 3300046616 Ga0495668_0000065 Ga0495668_0000065_78776_79825 328
25 3300048907 Ga0496104_0120039 Ga0496104_0120039_1364_2413 328
26 3300049459 Ga0495678_003955 Ga0495678_003955_1353_2402 328
27 3300003911 JGI25405J52794_10020282 JGI25405J52794_100202821 329
28 3300005937 Ga0081455_10000528 Ga0081455_1000052820 329
29 3300009177 Ga0105248_10019180 Ga0105248_100191805 329
30 3300046506 Ga0495583_0002539 Ga0495583_0002539_11160_12260 329
31 3300046522 Ga0495643_0000868 Ga0495643_0000868_18525_19625 329
32 3300031649 Ga0307514_10029335 Ga0307514_100293353 330
33 3300046522 Ga0495643_0069056 Ga0495643_0069056_512_1633 330
34 3300046525 Ga0495663_0001103 Ga0495663_0001103_1121_2242 330
35 3300046615 Ga0495656_0002234 Ga0495656_0002234_1361_2482 330
36 3300048090 Ga0495615_0000806 Ga0495615_0000806_2731_3852 330
37 3300005356 Ga0070674_100010150 Ga0070674_1000101506 331
38 3300005459 Ga0068867_100042483 Ga0068867_1000424834 331
39 3300005614 Ga0068856_100467283 Ga0068856_1004672831 331
40 3300009177 Ga0105248_10201386 Ga0105248_102013862 331
41 3300013306 Ga0163162_10025291 Ga0163162_100252913 331
42 3300013308 Ga0157375_10013310 Ga0157375_100133103 331
43 3300014325 Ga0163163_10125628 Ga0163163_101256283 331
44 3300014968 Ga0157379_10045439 Ga0157379_100454394 331
45 3300014969 Ga0157376_10070333 Ga0157376_100703332 331
46 3300025941 Ga0207711_10127763 Ga0207711_101277634 331
47 3300025942 Ga0207689_10121092 Ga0207689_101210921 331
48 3300026089 Ga0207648_10246101 Ga0207648_102461012 331
49 3300046683 Ga0495658_0039300 Ga0495658_0039300_173_1276 331
50 3300046452 Ga0495617_000045 Ga0495617_000045_10385_11593 332
51 3300046492 Ga0495585_0000003 Ga0495585_0000003_250265_251473 332
52 3300046500 Ga0495596_0001432 Ga0495596_0001432_2161_3306 332
53 3300046513 Ga0495616_0000348 Ga0495616_0000348_16690_17898 332
54 3300046522 Ga0495643_0020411 Ga0495643_0020411_619_1773 332
55 3300046524 Ga0495648_0000011 Ga0495648_0000011_175356_176564 332
56 3300046558 Ga0495633_0003045 Ga0495633_0003045_2917_4125 332
57 3300046616 Ga0495668_0028996 Ga0495668_0028996_1004_2155 332
58 3300047323 Ga0495683_0052014 Ga0495683_0052014_83_1291 332
59 3300025303 Ga0209051_1001482 Ga0209051_100148218 333
60 3300048909 Ga0496106_0126295 Ga0496106_0126295_745_1854 333
61 3300005293 Ga0065715_10105655 Ga0065715_101056553 334
62 3300026089 Ga0207648_10180470 Ga0207648_101804702 334
63 3300005328 Ga0070676_10005784 Ga0070676_100057848 335
64 3300005364 Ga0070673_100014170 Ga0070673_1000141706 335
65 3300005543 Ga0070672_100064180 Ga0070672_1000641801 335
66 3300025907 Ga0207645_10000759 Ga0207645_100007593 335
67 3300025933 Ga0207706_10218332 Ga0207706_102183322 335
68 3300025940 Ga0207691_10013300 Ga0207691_100133007 335
69 3300026121 Ga0207683_10104121 Ga0207683_101041212 335
70 3300048090 Ga0495615_0007105 Ga0495615_0007105_223_1380 335
71 3300053138 Ga0500564_007006 Ga0500564_007006_358_1488 335
72 3300003771 Ga0055526_1000569 Ga0055526_100056919 336
73 3300003773 Ga0055537_1000004 Ga0055537_100000410 336
74 3300003775 Ga0055524_1003216 Ga0055524_10032164 336
75 3300003784 Ga0055534_1000216 Ga0055534_100021630 336
76 3300003790 Ga0055528_1000378 Ga0055528_100037819 336
77 3300005293 Ga0065715_10202805 Ga0065715_102028051 336
78 3300005333 Ga0070677_10001769 Ga0070677_100017696 336
79 3300005334 Ga0068869_100034810 Ga0068869_1000348103 336
80 3300005338 Ga0068868_100075969 Ga0068868_1000759693 336
81 3300005338 Ga0068868_100154304 Ga0068868_1001543042 336
82 3300005347 Ga0070668_100030079 Ga0070668_1000300792 336
83 3300005353 Ga0070669_100018134 Ga0070669_1000181344 336
84 3300005355 Ga0070671_100035873 Ga0070671_1000358734 336
85 3300005355 Ga0070671_100127645 Ga0070671_1001276452 336
86 3300005356 Ga0070674_100024132 Ga0070674_1000241323 336
87 3300005364 Ga0070673_100030148 Ga0070673_1000301485 336
88 3300005367 Ga0070667_100071896 Ga0070667_1000718962 336
89 3300005455 Ga0070663_100001376 Ga0070663_1000013769 336
90 3300005456 Ga0070678_100138711 Ga0070678_1001387112 336
91 3300005457 Ga0070662_100093195 Ga0070662_1000931952 336
92 3300005459 Ga0068867_100001396 Ga0068867_1000013969 336
93 3300005467 Ga0070706_100000246 Ga0070706_10000024668 336
94 3300005548 Ga0070665_100058084 Ga0070665_1000580844 336
95 3300005564 Ga0070664_100235715 Ga0070664_1002357152 336
96 3300005578 Ga0068854_100195259 Ga0068854_1001952592 336
97 3300005618 Ga0068864_100048197 Ga0068864_1000481972 336
98 3300005719 Ga0068861_100349125 Ga0068861_1003491251 336
99 3300005834 Ga0068851_10002480 Ga0068851_100024808 336
100 3300005840 Ga0068870_10010396 Ga0068870_100103965 336
101 3300005841 Ga0068863_100015145 Ga0068863_1000151457 336
102 3300006178 Ga0075367_10000508 Ga0075367_1000050814 336
103 3300006178 Ga0075367_10062700 Ga0075367_100627003 336
104 3300006186 Ga0075369_10039471 Ga0075369_100394712 336
105 3300006195 Ga0075366_10028236 Ga0075366_100282363 336
106 3300006353 Ga0075370_10000729 Ga0075370_100007295 336
107 3300006353 Ga0075370_10086540 Ga0075370_100865401 336
108 3300006881 Ga0068865_100030816 Ga0068865_1000308162 336
109 3300009177 Ga0105248_10005877 Ga0105248_100058779 336
110 3300013297 Ga0157378_10097206 Ga0157378_100972062 336
111 3300013306 Ga0163162_10250794 Ga0163162_102507942 336
112 3300013308 Ga0157375_10003253 Ga0157375_100032536 336
113 3300013308 Ga0157375_10099393 Ga0157375_100993932 336
114 3300014326 Ga0157380_10434079 Ga0157380_104340791 336
115 3300014745 Ga0157377_10007507 Ga0157377_100075076 336
116 3300014968 Ga0157379_10125993 Ga0157379_101259933 336
117 3300014969 Ga0157376_10032652 Ga0157376_100326522 336
118 3300025263 Ga0209565_1000018 Ga0209565_100001825 336
119 3300025273 Ga0209673_1000090 Ga0209673_1000090152 336
120 3300025291 Ga0209675_1000005 Ga0209675_100000525 336
121 3300025295 Ga0209564_1000078 Ga0209564_1000078239 336
122 3300025299 Ga0209256_1000601 Ga0209256_100060118 336
123 3300025321 Ga0207656_10004403 Ga0207656_100044032 336
124 3300025893 Ga0207682_10002634 Ga0207682_100026346 336
125 3300025901 Ga0207688_10037392 Ga0207688_100373923 336
126 3300025908 Ga0207643_10010006 Ga0207643_100100062 336
127 3300025910 Ga0207684_10002337 Ga0207684_1000233720 336
128 3300025923 Ga0207681_10027783 Ga0207681_100277834 336
129 3300025925 Ga0207650_10000525 Ga0207650_1000052522 336
130 3300025926 Ga0207659_10000344 Ga0207659_1000034422 336
131 3300025931 Ga0207644_10127898 Ga0207644_101278982 336
132 3300025933 Ga0207706_10123168 Ga0207706_101231683 336
133 3300025937 Ga0207669_10066909 Ga0207669_100669092 336
134 3300025938 Ga0207704_10013573 Ga0207704_100135734 336
135 3300025940 Ga0207691_10001440 Ga0207691_100014402 336
136 3300025940 Ga0207691_10019991 Ga0207691_100199916 336
137 3300025941 Ga0207711_10028353 Ga0207711_100283533 336
138 3300025972 Ga0207668_10025519 Ga0207668_100255193 336
139 3300025986 Ga0207658_10015258 Ga0207658_100152585 336
140 3300026023 Ga0207677_10026277 Ga0207677_100262773 336
141 3300026067 Ga0207678_10001128 Ga0207678_100011288 336
142 3300026088 Ga0207641_10011057 Ga0207641_100110577 336
143 3300026089 Ga0207648_10002266 Ga0207648_1000226612 336
144 3300026089 Ga0207648_10004061 Ga0207648_1000406115 336
145 3300026089 Ga0207648_10020443 Ga0207648_100204435 336
146 3300026089 Ga0207648_10102466 Ga0207648_101024663 336
147 3300026095 Ga0207676_10116959 Ga0207676_101169592 336
148 3300026116 Ga0207674_10017494 Ga0207674_100174947 336
149 3300026121 Ga0207683_10011435 Ga0207683_100114353 336
150 3300026121 Ga0207683_10133181 Ga0207683_101331812 336
151 3300028379 Ga0268266_10054842 Ga0268266_100548424 336
152 3300031507 Ga0307509_10043721 Ga0307509_100437214 336
153 3300033180 Ga0307510_10001753 Ga0307510_1000175318 336
154 3300035691 Ga0373931_0014153 Ga0373931_0014153_1823_2923 336
155 3300035725 Ga0373947_0146429 Ga0373947_0146429_276_1388 336
156 3300046542 Ga0495597_0009890 Ga0495597_0009890_2335_3456 336
157 3300047443 Ga0495687_000716 Ga0495687_000716_26736_27857 336
158 3300047469 Ga0495673_0098672 Ga0495673_0098672_18_1130 336
159 3300048907 Ga0496104_0220703 Ga0496104_0220703_230_1339 336
160 3300048914 Ga0496111_0172046 Ga0496111_0172046_379_1488 336
161 3300050493 nmdc:mga0k408_66324_c1 nmdc:mga0k408_66324_c1_520_1635 336
162 3300050496 nmdc:mga07m45_156775_c1 nmdc:mga07m45_156775_c1_51_1163 336
163 3300050496 nmdc:mga07m45_3138_c1 nmdc:mga07m45_3138_c1_507_1628 336
164 3300050496 nmdc:mga07m45_55682_c1 nmdc:mga07m45_55682_c1_587_1702 336
165 3300046454 Ga0495592_0003099 Ga0495592_0003099_4703_5833 337
166 3300046660 Ga0495625_0025094 Ga0495625_0025094_2730_3845 337
167 3300047673 Ga0495593_0033332 Ga0495593_0033332_973_2073 337
168 3300053139 Ga0500568_0020528 Ga0500568_0020528_314_1426 337
169 iso_pu_bacteria 2643221554 2643792545 337
170 3300005539 Ga0068853_100079766 Ga0068853_1000797662 338
171 3300005577 Ga0068857_100006213 Ga0068857_1000062133 338
172 3300005840 Ga0068870_10119885 Ga0068870_101198852 338
173 3300009093 Ga0105240_10031043 Ga0105240_100310436 338
174 3300009176 Ga0105242_10099885 Ga0105242_100998852 338
175 3300009545 Ga0105237_10002284 Ga0105237_1000228415 338
176 3300009545 Ga0105237_10002643 Ga0105237_100026437 338
177 3300009551 Ga0105238_10034450 Ga0105238_100344503 338
178 3300010375 Ga0105239_10000832 Ga0105239_1000083212 338
179 3300014969 Ga0157376_10289661 Ga0157376_102896612 338
180 3300025913 Ga0207695_10150477 Ga0207695_101504772 338
181 3300025913 Ga0207695_10161043 Ga0207695_101610433 338
182 3300025914 Ga0207671_10010084 Ga0207671_100100849 338
183 3300025924 Ga0207694_10008131 Ga0207694_100081318 338
184 3300025981 Ga0207640_10130402 Ga0207640_101304022 338
185 3300026041 Ga0207639_10027466 Ga0207639_100274664 338
186 3300026089 Ga0207648_10140840 Ga0207648_101408401 338
187 3300026116 Ga0207674_10009257 Ga0207674_1000925712 338
188 3300031507 Ga0307509_10000092 Ga0307509_1000009295 338
189 3300044658 Ga0466972_0011483 Ga0466972_0011483_213_1373 338
190 3300044683 Ga0466965_0000094 Ga0466965_0000094_12383_13543 338
191 3300044706 Ga0466964_0000650 Ga0466964_0000650_6949_8109 338
192 3300044735 Ga0466968_0001696 Ga0466968_0001696_136_1296 338
193 3300046691 Ga0495670_0000090 Ga0495670_0000090_618_1757 338
194 3300003775 Ga0055524_1001034 Ga0055524_10010344 339
195 3300025299 Ga0209256_1000142 Ga0209256_100014262 339
196 3300026089 Ga0207648_10059532 Ga0207648_100595323 339
197 3300046474 Ga0495605_0024905 Ga0495605_0024905_1576_2742 339
198 3300046513 Ga0495616_0002237 Ga0495616_0002237_4605_5744 339
199 3300046558 Ga0495633_0005638 Ga0495633_0005638_3094_4233 339
200 3300046648 Ga0495611_0027446 Ga0495611_0027446_769_1908 339
201 3300005539 Ga0068853_100186731 Ga0068853_1001867312 340
202 3300005616 Ga0068852_100056365 Ga0068852_1000563653 340
203 3300005617 Ga0068859_100109554 Ga0068859_1001095543 340
204 3300005842 Ga0068858_100002592 Ga0068858_10000259218 340
205 3300005843 Ga0068860_100008860 Ga0068860_10000886010 340
206 3300006931 Ga0097620_100109553 Ga0097620_1001095532 340
207 3300013308 Ga0157375_10014399 Ga0157375_100143995 340
208 3300014326 Ga0157380_10006892 Ga0157380_100068926 340
209 3300014968 Ga0157379_10001431 Ga0157379_1000143122 340
210 3300025932 Ga0207690_10190431 Ga0207690_101904312 340
211 3300025940 Ga0207691_10002136 Ga0207691_1000213616 340
212 3300026041 Ga0207639_10306909 Ga0207639_103069092 340
213 3300028381 Ga0268264_10103528 Ga0268264_101035282 340
214 3300031730 Ga0307516_10023992 Ga0307516_100239922 340
215 3300046452 Ga0495617_000014 Ga0495617_000014_155950_157083 340
216 3300046453 Ga0495627_000061 Ga0495627_000061_103925_105055 340
217 3300046471 Ga0495650_0000019 Ga0495650_0000019_394071_395216 340
218 3300046471 Ga0495650_0007973 Ga0495650_0007973_829_1968 340
219 3300046474 Ga0495605_0000110 Ga0495605_0000110_17287_18420 340
220 3300046491 Ga0495584_0000002 Ga0495584_0000002_173226_174395 340
221 3300046491 Ga0495584_0000683 Ga0495584_0000683_18692_19831 340
222 3300046492 Ga0495585_0016803 Ga0495585_0016803_1128_2264 340
223 3300046492 Ga0495585_0121649 Ga0495585_0121649_189_1322 340
224 3300046501 Ga0495607_0012933 Ga0495607_0012933_4172_5305 340
225 3300046507 Ga0495606_0000526 Ga0495606_0000526_54668_55813 340
226 3300046507 Ga0495606_0004093 Ga0495606_0004093_11011_12180 340
227 3300046513 Ga0495616_0003062 Ga0495616_0003062_3707_4837 340
228 3300046517 Ga0495630_0063269 Ga0495630_0063269_80_1174 340
229 3300046518 Ga0495631_0040687 Ga0495631_0040687_157_1287 340
230 3300046523 Ga0495644_0040871 Ga0495644_0040871_174_1304 340
231 3300046524 Ga0495648_0000799 Ga0495648_0000799_22311_23444 340
232 3300046528 Ga0495642_0000017 Ga0495642_0000017_59633_60766 340
233 3300046616 Ga0495668_0001350 Ga0495668_0001350_13968_15101 340
234 3300046665 Ga0495661_0001503 Ga0495661_0001503_3881_5011 340
235 3300046674 Ga0495588_0029640 Ga0495588_0029640_378_1553 340
236 3300046684 Ga0495669_0003124 Ga0495669_0003124_2291_3424 340
237 3300046690 Ga0495624_0056437 Ga0495624_0056437_36_1130 340
238 3300046691 Ga0495670_0018271 Ga0495670_0018271_1632_2810 340
239 3300046692 Ga0495671_0000068 Ga0495671_0000068_13175_14308 340
240 3300046794 Ga0495589_0001875 Ga0495589_0001875_2588_3721 340
241 3300046810 Ga0495660_0053134 Ga0495660_0053134_376_1554 340
242 3300047321 Ga0495676_0027876 Ga0495676_0027876_3709_4803 340
243 3300047445 Ga0495677_0005593 Ga0495677_0005593_2663_3793 340
244 3300047446 Ga0495679_005959 Ga0495679_005959_4107_5285 340
245 3300047470 Ga0495681_0007834 Ga0495681_0007834_424_1560 340
246 3300048905 Ga0496102_0000369 Ga0496102_0000369_22800_23975 340
247 3300048906 Ga0496103_0152699 Ga0496103_0152699_274_1413 340
248 3300002773 JGI25152J39213_1000014 JGI25152J39213_100001443 341
249 3300002774 JGI25150J39212_1000145 JGI25150J39212_10001456 341
250 3300003215 JGI25153J46596_10004408 JGI25153J46596_100044084 341
251 3300003775 Ga0055524_1000462 Ga0055524_10004629 341
252 3300005547 Ga0070693_100169612 Ga0070693_1001696121 341
253 3300005614 Ga0068856_100205138 Ga0068856_1002051381 341
254 3300006195 Ga0075366_10000892 Ga0075366_100008926 341
255 3300009177 Ga0105248_10072356 Ga0105248_100723565 341
256 3300009177 Ga0105248_10294309 Ga0105248_102943092 341
257 3300025245 Ga0207425_1000009 Ga0207425_1000009406 341
258 3300025258 Ga0209129_1000061 Ga0209129_100006152 341
259 3300025263 Ga0209565_1006621 Ga0209565_10066214 341
260 3300025263 Ga0209565_1014087 Ga0209565_10140872 341
261 3300025297 Ga0209758_1000101 Ga0209758_1000101178 341
262 3300025940 Ga0207691_10094220 Ga0207691_100942203 341
263 3300025941 Ga0207711_10133354 Ga0207711_101333543 341
264 3300025941 Ga0207711_10136214 Ga0207711_101362141 341
265 3300025945 Ga0207679_10127055 Ga0207679_101270552 341
266 3300028786 Ga0307517_10000150 Ga0307517_1000015013 341
267 3300028786 Ga0307517_10095617 Ga0307517_100956173 341
268 3300028794 Ga0307515_10129919 Ga0307515_101299193 341
269 3300028794 Ga0307515_10303858 Ga0307515_103038581 341
270 3300031616 Ga0307508_10001639 Ga0307508_1000163920 341
271 3300046460 Ga0495638_0026203 Ga0495638_0026203_169_1311 341
272 3300046523 Ga0495644_0000415 Ga0495644_0000415_16081_17223 341
273 3300046692 Ga0495671_0100239 Ga0495671_0100239_124_1269 341
274 3300047320 Ga0495672_0017321 Ga0495672_0017321_1705_2847 341
275 3300050493 nmdc:mga0k408_882_c1 nmdc:mga0k408_882_c1_11173_12276 341
276 3300050511 nmdc:mga08y16_131277_c1 nmdc:mga08y16_131277_c1_46_1236 341

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kkr-assembly1.cif.gz_A crystal structure of catalytic core domain of biv integrase in crystal form i 0.7884 146 172
3l3u-assembly1.cif.gz_A crystal structure of the hiv-1 integrase core domain to 1.4a 0.7704 146 172
6puw-assembly1.cif.gz_B-2 structure of hiv cleaved synaptic complex (csc) intasome bound with magnesium and bictegravir (bic) 0.7704 146 172
6rwl-assembly1.cif.gz_C sivrcm intasome 0.7681 146 172
3s8v-assembly1.cif.gz_A crystal structure of lrp6-dkk1 complex 0.7676 44 326
ID Description Score Start End Superfamily
af_A0A2R8Q900_1_232_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7849 40 312 2.120.10.30
af_A0A2R8PYI8_197_421_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7813 144 326 2.120.10.30
af_Q66H79_552_654_2.40.10.500 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.7804 252 323 2.40.10.500
3kksA00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7791 146 172 3.30.420.10
af_K7KIW4_183_318_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.7759 43 172 2.40.128.630
ID Description Score Start End GO Terms
AF-A0A535Y243-F1-model_v4 TIGR03118 family protein 0.9772 195 339
AF-A0A3D3ZHF8-F1-model_v4 TIGR03118 family protein 0.976 256 341
AF-A0A535U0N8-F1-model_v4 TIGR03118 family protein 0.9753 120 337
AF-A0A4Y9RFZ7-F1-model_v4 TIGR03118 family protein 0.9748 118 341
AF-A0A536TUR2-F1-model_v4 TIGR03118 family protein 0.9742 231 337

Feature Viewer

pLDDT pTM Quality
93.76 0.91 High
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Predicted Structure (AlphaFold2)

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