F380325

General Info

Members Datasets Scaffolds Average Seq Length
275 188 550 70

Family's Representative Sequence

Representative Sequence 3300006048|Ga0075363_100638703|Ga0075363_1006387032
Length 86
Sequence MATGTVIEFDDAAGLGTVRLDQPRGDELLPDRTDPRPGADGSATEYAFHCTAIADGSRHIEVGTPVRFAVVAGRLGRWEATGLAPR

Samples

Sample ID Description Type Environment
1 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
80 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
84 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
85 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
86 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
87 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
102 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
103 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
104 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
105 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
106 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
109 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
110 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
111 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
148 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
172 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
173 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
174 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
177 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
178 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
185 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.64
Nodule 0
Rhizoplane 9.45
Rhizosphere 85.09
Stem 0
Stem Tuber 0
Unclassified 11.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075363_100638703 3300006048 Bacteria 640
2 Ga0070676_10514192 3300005328 Bacteria 852
3 Ga0070683_101167050 3300005329 Bacteria 740
4 Ga0070683_101766382 3300005329 Bacteria 595
5 Ga0070670_101922848 3300005331 Unclassified 545
6 Ga0068869_101011852 3300005334 Bacteria 724
7 Ga0068868_101460486 3300005338 Bacteria 639
8 Ga0068868_101965937 3300005338 Bacteria 555
9 Ga0070692_10223086 3300005345 Bacteria 1115
10 Ga0070675_101771265 3300005354 Bacteria 570
11 Ga0070671_101739772 3300005355 Bacteria 554
12 Ga0070674_101754979 3300005356 Bacteria 562
13 Ga0070673_100580592 3300005364 Bacteria 1021
14 Ga0070688_101308269 3300005365 Bacteria 585
15 Ga0070659_101067410 3300005366 Bacteria 711
16 Ga0070659_101614049 3300005366 Bacteria 579
17 Ga0070709_10845161 3300005434 Bacteria 721
18 Ga0070713_100203991 3300005436 Bacteria 1787
19 Ga0070711_100688155 3300005439 Bacteria 860
20 Ga0070663_100890090 3300005455 Bacteria 768
21 Ga0070678_101487820 3300005456 Bacteria 634
22 Ga0070685_10357774 3300005466 Bacteria 1000
23 Ga0070684_100151940 3300005535 Bacteria 2098
24 Ga0070684_100526481 3300005535 Bacteria 1096
25 Ga0070684_100788945 3300005535 Bacteria 888
26 Ga0070697_101657857 3300005536 Unclassified 572
27 Ga0068853_102104162 3300005539 Bacteria 547
28 Ga0070672_101228954 3300005543 Bacteria 668
29 Ga0070686_100398449 3300005544 Bacteria 1046
30 Ga0068855_101786557 3300005563 Bacteria 625
31 Ga0070664_101887843 3300005564 Bacteria 567
32 Ga0068854_100590286 3300005578 Bacteria 947
33 Ga0068856_102011762 3300005614 Bacteria 588
34 Ga0070702_100942818 3300005615 Bacteria 679
35 Ga0068863_100405367 3300005841 Bacteria 1334
36 Ga0081539_10018381 3300005985 Bacteria 4854
37 Ga0070717_10237912 3300006028 Bacteria 1605
38 Ga0075365_11026462 3300006038 Bacteria 581
39 Ga0075365_11166102 3300006038 Bacteria 542
40 Ga0075363_100542387 3300006048 Bacteria 693
41 Ga0075364_10009064 3300006051 Bacteria 5960
42 Ga0070715_10645541 3300006163 Bacteria 626
43 Ga0070712_100426569 3300006175 Bacteria 1100
44 Ga0068871_100625847 3300006358 Bacteria 981
45 Ga0075428_100227788 3300006844 Bacteria 2012
46 Ga0075431_100312178 3300006847 Bacteria 1587
47 Ga0075434_100281695 3300006871 Unclassified 1682
48 Ga0075434_100439860 3300006871 Bacteria 1325
49 Ga0105244_10557597 3300009036 Bacteria 527
50 Ga0105240_10659166 3300009093 Bacteria 1146
51 Ga0111539_10080037 3300009094 Bacteria 3843
52 Ga0111539_12209303 3300009094 Bacteria 638
53 Ga0105245_10017193 3300009098 Bacteria 6309
54 Ga0105245_11193238 3300009098 Bacteria 809
55 Ga0105245_12460697 3300009098 Bacteria 574
56 Ga0105247_11433482 3300009101 Bacteria 560
57 Ga0105247_11758216 3300009101 Bacteria 514
58 Ga0105243_10294072 3300009148 Bacteria 1469
59 Ga0105243_10821071 3300009148 Bacteria 918
60 Ga0105242_10475629 3300009176 Bacteria 1183
61 Ga0105249_12863730 3300009553 Bacteria 554
62 Ga0105249_13154980 3300009553 Bacteria 530
63 Ga0105246_11301196 3300011119 Bacteria 674
64 Ga0157374_10443186 3300013296 Bacteria 1299
65 Ga0157378_11229136 3300013297 Bacteria 789
66 Ga0163162_10505859 3300013306 Bacteria 1338
67 Ga0163162_12555222 3300013306 Bacteria 587
68 Ga0157375_10171207 3300013308 Bacteria 2319
69 Ga0157375_11525282 3300013308 Bacteria 789
70 Ga0163163_10430397 3300014325 Bacteria 1379
71 Ga0157379_10194809 3300014968 Bacteria 1831
72 Ga0207710_10735091 3300025900 Bacteria 518
73 Ga0207699_10202956 3300025906 Bacteria 1344
74 Ga0207693_10555613 3300025915 Bacteria 895
75 Ga0207663_10047830 3300025916 Bacteria 2643
76 Ga0207663_10733372 3300025916 Bacteria 784
77 Ga0207650_11326388 3300025925 Unclassified 612
78 Ga0207687_10147926 3300025927 Unclassified 1789
79 Ga0207687_10283344 3300025927 Bacteria 1329
80 Ga0207700_10256141 3300025928 Bacteria 1497
81 Ga0207644_10556559 3300025931 Bacteria 950
82 Ga0207690_11156417 3300025932 Bacteria 646
83 Ga0207709_10580488 3300025935 Unclassified 885
84 Ga0207670_10345265 3300025936 Bacteria 1177
85 Ga0207669_11147335 3300025937 Unclassified 657
86 Ga0207665_10588901 3300025939 Bacteria 867
87 Ga0207691_10904035 3300025940 Unclassified 739
88 Ga0207711_12102018 3300025941 Bacteria 507
89 Ga0207689_10230202 3300025942 Bacteria 1532
90 Ga0207689_11667046 3300025942 Unclassified 529
91 Ga0207689_11813383 3300025942 Unclassified 503
92 Ga0207661_10404625 3300025944 Bacteria 1238
93 Ga0207661_11198549 3300025944 Bacteria 699
94 Ga0207651_10798514 3300025960 Bacteria 837
95 Ga0207651_11433160 3300025960 Bacteria 622
96 Ga0207677_10816941 3300026023 Bacteria 835
97 Ga0207677_10883841 3300026023 Bacteria 805
98 Ga0207648_11052566 3300026089 Bacteria 763
99 Ga0207683_10952025 3300026121 Bacteria 797
100 Ga0207428_10503879 3300027907 Bacteria 879
101 Ga0268266_10204214 3300028379 Bacteria 1810
102 Ga0268266_10712102 3300028379 Bacteria 968
103 Ga0268266_11620204 3300028379 Bacteria 623
104 Ga0265326_10219195 3300028558 Bacteria 547
105 Ga0265318_10146737 3300028577 Bacteria 866
106 Ga0265338_10113858 3300028800 Bacteria 2172
107 Ga0265327_10010154 3300031251 Bacteria 6660
108 Ga0265327_10242050 3300031251 Bacteria 806
109 Ga0316576_10413199 3300031727 Bacteria 999
110 Ga0316578_10105630 3300031728 Bacteria 1690
111 Ga0316578_10370506 3300031728 Bacteria 851
112 Ga0373926_0450744 3300035083 Bacteria 511
113 Ga0373928_0218063 3300035084 Bacteria 557
114 Ga0373936_0136894 3300035113 Bacteria 1056
115 Ga0373953_0563517 3300035117 Unclassified 507
116 Ga0373955_0545990 3300035172 Unclassified 709
117 Ga0373961_0110848 3300035241 Bacteria 899
118 Ga0373961_0346307 3300035241 Bacteria 559
119 Ga0316574_0129929 3300035398 Bacteria 1621
120 Ga0316574_0228162 3300035398 Bacteria 1192
121 Ga0316574_0582815 3300035398 Bacteria 692
122 Ga0373927_0613966 3300035695 Bacteria 719
123 Ga0373933_0071941 3300035724 Bacteria 2106
124 Ga0373947_0074082 3300035725 Bacteria 2094
125 Ga0373937_0671877 3300036401 Bacteria 982
126 Ga0316582_0637037 3300036647 Unclassified 733
127 Ga0316584_1146618 3300036712 Bacteria 514
128 Ga0395905_0202693 3300037471 Bacteria 1860
129 Ga0400483_042757 3300039062 Bacteria 8014
130 Ga0400483_286903 3300039062 Bacteria 4244
131 Ga0436362_1229536 3300039453 Bacteria 579
132 Ga0451789_0218506 3300041443 Bacteria 825
133 Ga0451793_1499681 3300041452 Unclassified 509
134 Ga0451833_1166180 3300041491 Bacteria 567
135 Ga0451845_0848251 3300041501 Bacteria 622
136 Ga0451853_2866914 3300041512 Bacteria 773
137 Ga0450923_005415 3300042125 Bacteria 2061
138 Ga0466967_0107235 3300045976 Bacteria 2562
139 Ga0466967_2327034 3300045976 Bacteria 531
140 Ga0495629_1010696 3300046459 Bacteria 541
141 Ga0495641_0121948 3300046461 Bacteria 1163
142 Ga0495582_0217875 3300046473 Bacteria 1092
143 Ga0495582_0632047 3300046473 Bacteria 619
144 Ga0495662_0404590 3300046476 Bacteria 670
145 Ga0495594_0635414 3300046499 Bacteria 605
146 Ga0495607_0331645 3300046501 Bacteria 707
147 Ga0495583_0274141 3300046506 Bacteria 673
148 Ga0495618_0044542 3300046514 Bacteria 2799
149 Ga0495618_0467294 3300046514 Bacteria 764
150 Ga0495630_0055834 3300046517 Bacteria 2959
151 Ga0495630_0130812 3300046517 Bacteria 1906
152 Ga0495630_0179762 3300046517 Bacteria 1613
153 Ga0495630_0266792 3300046517 Unclassified 1308
154 Ga0495630_0320874 3300046517 Bacteria 1184
155 Ga0495630_0603816 3300046517 Bacteria 841
156 Ga0495666_0216031 3300046526 Bacteria 879
157 Ga0495666_0365184 3300046526 Bacteria 650
158 Ga0495652_0266669 3300046529 Bacteria 1261
159 Ga0495652_0298133 3300046529 Bacteria 1173
160 Ga0495640_0048523 3300046533 Bacteria 2934
161 Ga0495586_0046867 3300046535 Bacteria 2331
162 Ga0495586_0364995 3300046535 Bacteria 830
163 Ga0495587_0214045 3300046536 Bacteria 1088
164 Ga0495634_0009563 3300046642 Bacteria 7145
165 Ga0495635_0087890 3300046663 Unclassified 2127
166 Ga0495657_0331850 3300046675 Bacteria 902
167 Ga0495658_0205851 3300046683 Bacteria 1228
168 Ga0495658_0363761 3300046683 Bacteria 920
169 Ga0495613_0007410 3300046689 Bacteria 8178
170 Ga0495624_0384518 3300046690 Bacteria 843
171 Ga0495600_0745541 3300046809 Bacteria 586
172 Ga0495674_0156043 3300047319 Bacteria 1912
173 Ga0495674_0749801 3300047319 Bacteria 763
174 Ga0495674_1105417 3300047319 Unclassified 603
175 Ga0495672_0487311 3300047320 Unclassified 550
176 Ga0495672_0527357 3300047320 Bacteria 521
177 Ga0495676_0200751 3300047321 Bacteria 1386
178 Ga0495676_0722733 3300047321 Unclassified 644
179 Ga0495680_0422247 3300047322 Unclassified 917
180 Ga0495680_0673379 3300047322 Bacteria 686
181 Ga0495684_0174942 3300047471 Unclassified 1594
182 Ga0495684_0265801 3300047471 Bacteria 1243
183 Ga0495684_0461399 3300047471 Bacteria 881
184 Ga0495684_0917022 3300047471 Bacteria 563
185 Ga0495593_0150580 3300047673 Bacteria 1177
186 Ga0495593_0416429 3300047673 Unclassified 672
187 Ga0495593_0517351 3300047673 Bacteria 598
188 Ga0495602_0548197 3300048088 Bacteria 802
189 Ga0495602_0656098 3300048088 Bacteria 716
190 Ga0496100_0059388 3300048903 Bacteria 2513
191 Ga0496100_0302051 3300048903 Bacteria 1198
192 Ga0496101_0100258 3300048904 Bacteria 2166
193 Ga0496101_0170332 3300048904 Bacteria 1673
194 Ga0496102_0159686 3300048905 Bacteria 2120
195 Ga0496102_1024393 3300048905 Unclassified 746
196 Ga0496103_0445091 3300048906 Bacteria 831
197 Ga0496104_0217779 3300048907 Bacteria 1821
198 Ga0496104_0418944 3300048907 Bacteria 1251
199 Ga0496105_0046030 3300048908 Bacteria 3601
200 Ga0496105_1426206 3300048908 Bacteria 501
201 Ga0496106_0645148 3300048909 Bacteria 846
202 Ga0496107_1215084 3300048910 Bacteria 541
203 Ga0496108_0898272 3300048911 Bacteria 760
204 Ga0496108_0968692 3300048911 Bacteria 728
205 Ga0496108_1599331 3300048911 Unclassified 539
206 Ga0496109_0376019 3300048912 Bacteria 1342
207 Ga0496109_0667531 3300048912 Bacteria 977
208 Ga0496109_0930227 3300048912 Bacteria 807
209 Ga0496109_1783285 3300048912 Bacteria 549
210 Ga0496110_0641020 3300048913 Bacteria 962
211 Ga0496113_0955205 3300048916 Bacteria 676
212 Ga0496114_0190018 3300048917 Bacteria 1797
213 Ga0496115_0001704 3300048918 Bacteria 15766
214 Ga0501031_0015258 3300049568 Bacteria 4988
215 Ga0501034_0338977 3300049571 Bacteria 1434
216 Ga0501034_0615321 3300049571 Bacteria 990
217 Ga0501034_1334480 3300049571 Bacteria 593
218 Ga0501036_0199029 3300049572 Unclassified 1685
219 Ga0501036_0219897 3300049572 Bacteria 1595
220 Ga0501037_0890755 3300049573 Unclassified 584
221 Ga0501038_0021179 3300049574 Bacteria 5840
222 Ga0501038_0250662 3300049574 Bacteria 1403
223 Ga0501039_0030014 3300049575 Bacteria 4189
224 Ga0501040_0015861 3300049576 Bacteria 4979
225 Ga0501040_0134986 3300049576 Bacteria 1737
226 Ga0501041_0002275 3300049577 Bacteria 10866
227 Ga0501042_0009984 3300049578 Bacteria 6347
228 Ga0501043_0736197 3300049579 Unclassified 718
229 Ga0501043_1300666 3300049579 Bacteria 507
230 Ga0501046_0010637 3300049580 Bacteria 7893
231 Ga0501046_0296321 3300049580 Bacteria 1182
232 Ga0501047_0187106 3300049581 Bacteria 1935
233 Ga0501048_0083756 3300049582 Bacteria 2249
234 Ga0501068_0022183 3300049584 Bacteria 3711
235 Ga0501070_0038642 3300049586 Bacteria 3982
236 Ga0501070_0377866 3300049586 Bacteria 1148
237 Ga0501071_0003794 3300049587 Bacteria 9499
238 Ga0501071_0163539 3300049587 Bacteria 1664
239 Ga0501071_0628787 3300049587 Bacteria 826
240 Ga0501072_0031284 3300049588 Bacteria 4164
241 Ga0501072_1439083 3300049588 Unclassified 533
242 Ga0501073_0048589 3300049589 Bacteria 2978
243 Ga0501073_0625993 3300049589 Bacteria 743
244 Ga0501074_1064675 3300049590 Unclassified 568
245 Ga0501074_1268148 3300049590 Unclassified 517
246 Ga0501075_0002628 3300049591 Bacteria 11998
247 Ga0501076_0003348 3300049592 Bacteria 11248
248 Ga0501076_0263634 3300049592 Bacteria 1411
249 Ga0501079_0318455 3300049741 Bacteria 1217
250 Ga0501079_1149057 3300049741 Bacteria 612
251 Ga0501080_0052588 3300049742 Bacteria 3791
252 Ga0501080_0199729 3300049742 Bacteria 1836
253 Ga0501081_0163213 3300049743 Unclassified 1606
254 Ga0501081_0678780 3300049743 Bacteria 773
255 Ga0501083_0232564 3300049744 Bacteria 1200
256 Ga0501044_0791823 3300049823 Bacteria 828
257 Ga0501045_0021495 3300049824 Bacteria 4616
258 nmdc:mga00v17_4837_c1 3300050491 Bacteria 7055
259 nmdc:mga0yw44_1085033_c1 3300050492 Bacteria 541
260 nmdc:mga08y16_221787_c1 3300050511 Bacteria 1957
261 nmdc:mga0n895_448860_c1 3300050512 Bacteria 1302
262 nmdc:mga0n895_78766_c1 3300050512 Bacteria 3280
263 Ga0495601_0167412 3300053077 Bacteria 1436
264 Ga0495601_0341630 3300053077 Bacteria 974
265 Ga0495595_0011366 3300053084 Bacteria 3720
266 Ga0495595_0178148 3300053084 Unclassified 1054
267 Ga0495595_0307069 3300053084 Bacteria 798
268 Ga0495595_0452035 3300053084 Bacteria 653
269 Ga0495619_0028852 3300053085 Bacteria 3581
270 Ga0495619_0294318 3300053085 Bacteria 1124
271 Ga0500566_0507041 3300053094 Bacteria 518
272 Ga0500593_078287 3300053117 Bacteria 1422
273 Ga0500568_0000124 3300053139 Bacteria 68924
274 Ga0501084_0003276 3300054114 Bacteria 13101
275 Ga0530510_0006692 3300061734 Bacteria 8038
276 Ga0075363_100638703
277 Ga0070676_10514192
278 Ga0070683_101167050
279 Ga0070683_101766382
280 Ga0070670_101922848
281 Ga0068869_101011852
282 Ga0068868_101460486
283 Ga0068868_101965937
284 Ga0070692_10223086
285 Ga0070675_101771265
286 Ga0070671_101739772
287 Ga0070674_101754979
288 Ga0070673_100580592
289 Ga0070688_101308269
290 Ga0070659_101067410
291 Ga0070659_101614049
292 Ga0070709_10845161
293 Ga0070713_100203991
294 Ga0070711_100688155
295 Ga0070663_100890090
296 Ga0070678_101487820
297 Ga0070685_10357774
298 Ga0070684_100151940
299 Ga0070684_100526481
300 Ga0070684_100788945
301 Ga0070697_101657857
302 Ga0068853_102104162
303 Ga0070672_101228954
304 Ga0070686_100398449
305 Ga0068855_101786557
306 Ga0070664_101887843
307 Ga0068854_100590286
308 Ga0068856_102011762
309 Ga0070702_100942818
310 Ga0068863_100405367
311 Ga0081539_10018381
312 Ga0070717_10237912
313 Ga0075365_11026462
314 Ga0075365_11166102
315 Ga0075363_100542387
316 Ga0075364_10009064
317 Ga0070715_10645541
318 Ga0070712_100426569
319 Ga0068871_100625847
320 Ga0075428_100227788
321 Ga0075431_100312178
322 Ga0075434_100281695
323 Ga0075434_100439860
324 Ga0105244_10557597
325 Ga0105240_10659166
326 Ga0111539_10080037
327 Ga0111539_12209303
328 Ga0105245_10017193
329 Ga0105245_11193238
330 Ga0105245_12460697
331 Ga0105247_11433482
332 Ga0105247_11758216
333 Ga0105243_10294072
334 Ga0105243_10821071
335 Ga0105242_10475629
336 Ga0105249_12863730
337 Ga0105249_13154980
338 Ga0105246_11301196
339 Ga0157374_10443186
340 Ga0157378_11229136
341 Ga0163162_10505859
342 Ga0163162_12555222
343 Ga0157375_10171207
344 Ga0157375_11525282
345 Ga0163163_10430397
346 Ga0157379_10194809
347 Ga0207710_10735091
348 Ga0207699_10202956
349 Ga0207693_10555613
350 Ga0207663_10047830
351 Ga0207663_10733372
352 Ga0207650_11326388
353 Ga0207687_10147926
354 Ga0207687_10283344
355 Ga0207700_10256141
356 Ga0207644_10556559
357 Ga0207690_11156417
358 Ga0207709_10580488
359 Ga0207670_10345265
360 Ga0207669_11147335
361 Ga0207665_10588901
362 Ga0207691_10904035
363 Ga0207711_12102018
364 Ga0207689_10230202
365 Ga0207689_11667046
366 Ga0207689_11813383
367 Ga0207661_10404625
368 Ga0207661_11198549
369 Ga0207651_10798514
370 Ga0207651_11433160
371 Ga0207677_10816941
372 Ga0207677_10883841
373 Ga0207648_11052566
374 Ga0207683_10952025
375 Ga0207428_10503879
376 Ga0268266_10204214
377 Ga0268266_10712102
378 Ga0268266_11620204
379 Ga0265326_10219195
380 Ga0265318_10146737
381 Ga0265338_10113858
382 Ga0265327_10010154
383 Ga0265327_10242050
384 Ga0316576_10413199
385 Ga0316578_10105630
386 Ga0316578_10370506
387 Ga0373926_0450744
388 Ga0373928_0218063
389 Ga0373936_0136894
390 Ga0373953_0563517
391 Ga0373955_0545990
392 Ga0373961_0110848
393 Ga0373961_0346307
394 Ga0316574_0129929
395 Ga0316574_0228162
396 Ga0316574_0582815
397 Ga0373927_0613966
398 Ga0373933_0071941
399 Ga0373947_0074082
400 Ga0373937_0671877
401 Ga0316582_0637037
402 Ga0316584_1146618
403 Ga0395905_0202693
404 Ga0400483_042757
405 Ga0400483_286903
406 Ga0436362_1229536
407 Ga0451789_0218506
408 Ga0451793_1499681
409 Ga0451833_1166180
410 Ga0451845_0848251
411 Ga0451853_2866914
412 Ga0450923_005415
413 Ga0466967_0107235
414 Ga0466967_2327034
415 Ga0495629_1010696
416 Ga0495641_0121948
417 Ga0495582_0217875
418 Ga0495582_0632047
419 Ga0495662_0404590
420 Ga0495594_0635414
421 Ga0495607_0331645
422 Ga0495583_0274141
423 Ga0495618_0044542
424 Ga0495618_0467294
425 Ga0495630_0055834
426 Ga0495630_0130812
427 Ga0495630_0179762
428 Ga0495630_0266792
429 Ga0495630_0320874
430 Ga0495630_0603816
431 Ga0495666_0216031
432 Ga0495666_0365184
433 Ga0495652_0266669
434 Ga0495652_0298133
435 Ga0495640_0048523
436 Ga0495586_0046867
437 Ga0495586_0364995
438 Ga0495587_0214045
439 Ga0495634_0009563
440 Ga0495635_0087890
441 Ga0495657_0331850
442 Ga0495658_0205851
443 Ga0495658_0363761
444 Ga0495613_0007410
445 Ga0495624_0384518
446 Ga0495600_0745541
447 Ga0495674_0156043
448 Ga0495674_0749801
449 Ga0495674_1105417
450 Ga0495672_0487311
451 Ga0495672_0527357
452 Ga0495676_0200751
453 Ga0495676_0722733
454 Ga0495680_0422247
455 Ga0495680_0673379
456 Ga0495684_0174942
457 Ga0495684_0265801
458 Ga0495684_0461399
459 Ga0495684_0917022
460 Ga0495593_0150580
461 Ga0495593_0416429
462 Ga0495593_0517351
463 Ga0495602_0548197
464 Ga0495602_0656098
465 Ga0496100_0059388
466 Ga0496100_0302051
467 Ga0496101_0100258
468 Ga0496101_0170332
469 Ga0496102_0159686
470 Ga0496102_1024393
471 Ga0496103_0445091
472 Ga0496104_0217779
473 Ga0496104_0418944
474 Ga0496105_0046030
475 Ga0496105_1426206
476 Ga0496106_0645148
477 Ga0496107_1215084
478 Ga0496108_0898272
479 Ga0496108_0968692
480 Ga0496108_1599331
481 Ga0496109_0376019
482 Ga0496109_0667531
483 Ga0496109_0930227
484 Ga0496109_1783285
485 Ga0496110_0641020
486 Ga0496113_0955205
487 Ga0496114_0190018
488 Ga0496115_0001704
489 Ga0501031_0015258
490 Ga0501034_0338977
491 Ga0501034_0615321
492 Ga0501034_1334480
493 Ga0501036_0199029
494 Ga0501036_0219897
495 Ga0501037_0890755
496 Ga0501038_0021179
497 Ga0501038_0250662
498 Ga0501039_0030014
499 Ga0501040_0015861
500 Ga0501040_0134986
501 Ga0501041_0002275
502 Ga0501042_0009984
503 Ga0501043_0736197
504 Ga0501043_1300666
505 Ga0501046_0010637
506 Ga0501046_0296321
507 Ga0501047_0187106
508 Ga0501048_0083756
509 Ga0501068_0022183
510 Ga0501070_0038642
511 Ga0501070_0377866
512 Ga0501071_0003794
513 Ga0501071_0163539
514 Ga0501071_0628787
515 Ga0501072_0031284
516 Ga0501072_1439083
517 Ga0501073_0048589
518 Ga0501073_0625993
519 Ga0501074_1064675
520 Ga0501074_1268148
521 Ga0501075_0002628
522 Ga0501076_0003348
523 Ga0501076_0263634
524 Ga0501079_0318455
525 Ga0501079_1149057
526 Ga0501080_0052588
527 Ga0501080_0199729
528 Ga0501081_0163213
529 Ga0501081_0678780
530 Ga0501083_0232564
531 Ga0501044_0791823
532 Ga0501045_0021495
533 nmdc:mga00v17_4837_c1
534 nmdc:mga0yw44_1085033_c1
535 nmdc:mga08y16_221787_c1
536 nmdc:mga0n895_448860_c1
537 nmdc:mga0n895_78766_c1
538 Ga0495601_0167412
539 Ga0495601_0341630
540 Ga0495595_0011366
541 Ga0495595_0178148
542 Ga0495595_0307069
543 Ga0495595_0452035
544 Ga0495619_0028852
545 Ga0495619_0294318
546 Ga0500566_0507041
547 Ga0500593_078287
548 Ga0500568_0000124
549 Ga0501084_0003276
550 Ga0530510_0006692

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6a6j-assembly2.cif.gz_C crystal structure of zebra fish y-box protein1 (yb-1) cold-shock domain in complex with 6mer m5c rna 0.9219 4 70
5jx4-assembly1.cif.gz_A crystal structure of e36-g37del mutant of the bacillus caldolyticus cold shock protein. 0.9165 5 70
6ktc-assembly1.cif.gz_A crystal structure of ybx1 csd with m5c rna 0.9111 4 69
7f3j-assembly2.cif.gz_C crystal structure of human ybx2 csd in complex with m5c rna in space group p1 0.9062 4 69
1mjc-assembly1.cif.gz_A crystal structure of cspa, the major cold shock protein of escherichia coli 0.9052 4 70
ID Description Score Start End Superfamily
af_P92186_48_133_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9243 5 70 2.40.50.140
5jx4A00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9166 5 70 2.40.50.140
af_P91306_55_138_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9064 4 69 2.40.50.140
af_E7F429_280_346_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.905 6 70 2.40.50.140
af_Q94C69_1_75_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8972 2 68 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7V9PDS7-F1-model_v4 Cold shock domain-containing protein 1.004 5 70 GO:0003676
AF-A0A7C4TFE4-F1-model_v4 Cold shock domain-containing protein 1.003 7 70 GO:0003676
AF-A0A6B0ZMS6-F1-model_v4 Cold-shock protein 1.003 5 70 GO:0003676
AF-A0A3C1CIW7-F1-model_v4 Cold-shock protein 1.003 5 69 GO:0003676
AF-A0A832F1N5-F1-model_v4 Cold shock domain-containing protein 1.003 4 70

Map