F379475

General Info

Members Datasets Scaffolds Average Seq Length
274 193 548 575

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100010912|Ga0070683_1000109123
Length 659
Sequence MDVPWEWKKVGNFGSLRERDCFVSWMRDQIASGISEEIEPPPDQQREPGDRWFRHIPTGSLWRLVPIDNPYGPGFWPAQDKRRVQRRLAAILAADVVGYSALMERDEEATYAEFERLKRELIEPSLSHHEGRLIKTTGDGALAEFASPLAAMRCAVEIQDHLASGCSPLTLRVGLNLGDIIVGQDGDLYGDGINIAVRLEGNADPGGILISEKVYSEVEGKLDVDFEDRGERQLKNISKPVRAFAVRAGAHSALVDSLSAVPPLPDKPSIAVLPFENMSGDPEQEYFADGMVEEIITALSRFKWLFVIARNSSFTFKGKAVDVKEVGRRLGVRYVLEGSVRKASGKVRITGQLIDAATGTHLWADRFERDLTDVFALQDEVTVAVVSAIEPKLLQTEIAMAARRRPENLTAYDFYLRAMQQYYQTTRDGLAEAIRLAHRALELDPGFGVVAALAGSCHGLNVLMGYAADPQFDRKEAVRLLRLALSLDDSDPDILAWASLTSAFMVGDCEGAIEMADRAVTLNPNSYWAWNARGWAYRNAGLPEQAVGSFERAVRMSPIDPLLHRAFVGVAQALIELHRFDEAIVAGKKAQRQNSSFSSAYRCLASAFAHLGRDAEARDAAARLLEVDPGFTISAWIARGGQSNAKLVIEGLRKAGLPE

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
73 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
74 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
82 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
97 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
98 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
104 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
107 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
131 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
132 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
133 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
134 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
135 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
136 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
137 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
138 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
139 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
140 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
141 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
142 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
143 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
144 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
145 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
146 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
147 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
148 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
149 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
150 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
151 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
152 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
153 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
154 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
155 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
156 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
157 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
158 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
159 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
160 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
161 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
162 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
163 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
164 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
165 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
166 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
167 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
168 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
169 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
170 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
171 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
172 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
173 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
174 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
175 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
176 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
177 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
178 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
179 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
180 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
181 2936002035 Bradyrhizobium sp. I1.8.5 Isolate Nodule
182 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
183 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
184 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
185 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
186 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
187 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
188 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
189 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
190 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
191 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
192 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
193 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 76.28
Metatranscriptomes 0
Isolates 23.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.47
Nodule 20.8
Rhizoplane 3.28
Rhizosphere 61.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100010912 3300005329 Bacteria 7823
2 JGI25404J52841_10000111 3300003659 Bacteria 8184
3 JGI25404J52841_10001413 3300003659 Bacteria 4214
4 JGI25404J52841_10004707 3300003659 Bacteria 2785
5 Ga0070658_10057093 3300005327 Bacteria 3174
6 Ga0070683_100011103 3300005329 Bacteria 7767
7 Ga0070683_100014558 3300005329 Bacteria 6886
8 Ga0070680_100021279 3300005336 Bacteria 5153
9 Ga0070680_100042331 3300005336 Bacteria 3695
10 Ga0070680_100058473 3300005336 Bacteria 3152
11 Ga0070660_100005468 3300005339 Bacteria 8795
12 Ga0070668_100008492 3300005347 Bacteria 7629
13 Ga0070668_100050433 3300005347 Bacteria 3204
14 Ga0070668_100050496 3300005347 Bacteria 3202
15 Ga0070709_10011838 3300005434 Bacteria 4871
16 Ga0070714_100028453 3300005435 Bacteria 4638
17 Ga0070713_100021383 3300005436 Bacteria 4975
18 Ga0070713_100154896 3300005436 Bacteria 2042
19 Ga0070713_100163329 3300005436 Bacteria 1989
20 Ga0070710_10020507 3300005437 Bacteria 3430
21 Ga0070711_100023648 3300005439 Bacteria 3999
22 Ga0070711_100030792 3300005439 Bacteria 3556
23 Ga0070694_100049929 3300005444 Bacteria 2818
24 Ga0070678_100096318 3300005456 Bacteria 2282
25 Ga0070681_10014525 3300005458 Bacteria 7837
26 Ga0070681_10032087 3300005458 Bacteria 5271
27 Ga0070681_10046304 3300005458 Bacteria 4348
28 Ga0070681_10098991 3300005458 Bacteria 2862
29 Ga0070679_100015371 3300005530 Bacteria 7354
30 Ga0070679_100018059 3300005530 Bacteria 6836
31 Ga0070679_100098248 3300005530 Bacteria 2915
32 Ga0070679_100102935 3300005530 Bacteria 2841
33 Ga0070684_100015276 3300005535 Bacteria 6248
34 Ga0068853_100006153 3300005539 Bacteria 9505
35 Ga0070665_100093349 3300005548 Bacteria 3014
36 Ga0068855_100038902 3300005563 Bacteria 5648
37 Ga0068855_100085155 3300005563 Bacteria 3658
38 Ga0068855_100198941 3300005563 Bacteria 2257
39 Ga0068857_100010917 3300005577 Bacteria 7907
40 Ga0068857_100088850 3300005577 Bacteria 2765
41 Ga0068854_100064180 3300005578 Bacteria 2668
42 Ga0068859_100043162 3300005617 Bacteria 4531
43 Ga0068851_10010287 3300005834 Bacteria 4363
44 Ga0068860_100156931 3300005843 Bacteria 2193
45 Ga0081455_10005311 3300005937 Bacteria 14144
46 Ga0081455_10006849 3300005937 Bacteria 12142
47 Ga0081455_10008960 3300005937 Bacteria 10340
48 Ga0081455_10020493 3300005937 Bacteria 6222
49 Ga0081455_10058656 3300005937 Bacteria 3255
50 Ga0081540_1000635 3300005983 Bacteria 33393
51 Ga0081540_1002176 3300005983 Bacteria 16229
52 Ga0081540_1002419 3300005983 Bacteria 15213
53 Ga0081540_1003501 3300005983 Bacteria 12388
54 Ga0081540_1003671 3300005983 Bacteria 12041
55 Ga0081540_1006285 3300005983 Bacteria 8694
56 Ga0081540_1007076 3300005983 Bacteria 8062
57 Ga0081540_1008658 3300005983 Bacteria 7088
58 Ga0081540_1008716 3300005983 Bacteria 7059
59 Ga0081540_1013276 3300005983 Bacteria 5365
60 Ga0081540_1016895 3300005983 Bacteria 4543
61 Ga0081540_1018351 3300005983 Bacteria 4295
62 Ga0081540_1049246 3300005983 Bacteria 2103
63 Ga0075364_10055463 3300006051 Bacteria 2593
64 Ga0070712_100015694 3300006175 Bacteria 4882
65 Ga0070712_100027072 3300006175 Bacteria 3825
66 Ga0070712_100047607 3300006175 Bacteria 2968
67 Ga0075367_10019502 3300006178 Bacteria 3762
68 Ga0075367_10034087 3300006178 Bacteria 2938
69 Ga0075369_10004943 3300006186 Bacteria 4958
70 Ga0075366_10009592 3300006195 Bacteria 5407
71 Ga0075366_10025399 3300006195 Bacteria 3460
72 Ga0075370_10031276 3300006353 Bacteria 2970
73 Ga0097620_100043163 3300006931 Bacteria 4531
74 Ga0099794_10001580 3300007265 Bacteria 8025
75 Ga0099794_10039921 3300007265 Bacteria 2230
76 Ga0105240_10017355 3300009093 Bacteria 9703
77 Ga0105241_10120331 3300009174 Bacteria 2113
78 Ga0105248_10060206 3300009177 Bacteria 4263
79 Ga0105237_10086682 3300009545 Bacteria 3121
80 Ga0105238_10012141 3300009551 Bacteria 8682
81 Ga0105238_10074446 3300009551 Bacteria 3388
82 Ga0105238_10077763 3300009551 Bacteria 3309
83 Ga0099796_10005714 3300010159 Bacteria 3123
84 Ga0099796_10016080 3300010159 Bacteria 2202
85 Ga0105239_10048511 3300010375 Bacteria 4656
86 Ga0105239_10056685 3300010375 Bacteria 4298
87 Ga0157369_10039701 3300013105 Bacteria 5143
88 Ga0157369_10045795 3300013105 Bacteria 4756
89 Ga0171462_1063 3300013250 Bacteria 15657
90 Ga0157378_10073625 3300013297 Bacteria 3071
91 Ga0163162_10083321 3300013306 Bacteria 3271
92 Ga0163162_10125930 3300013306 Bacteria 2668
93 Ga0163163_10050477 3300014325 Bacteria 4097
94 Ga0157379_10097777 3300014968 Bacteria 2635
95 Ga0213874_10003144 3300021377 Bacteria 3638
96 Ga0213876_10000626 3300021384 Bacteria 25893
97 Ga0209758_1007483 3300025297 Bacteria 7409
98 Ga0207426_1007460 3300025302 Bacteria 4575
99 Ga0207696_1016086 3300025711 Bacteria 2514
100 Ga0207707_10000359 3300025912 Bacteria 47942
101 Ga0207707_10002825 3300025912 Bacteria 15475
102 Ga0207707_10035778 3300025912 Bacteria 4342
103 Ga0207707_10047965 3300025912 Bacteria 3720
104 Ga0207695_10090864 3300025913 Bacteria 3068
105 Ga0207693_10011622 3300025915 Bacteria 7123
106 Ga0207693_10034525 3300025915 Bacteria 3989
107 Ga0207663_10014454 3300025916 Bacteria 4321
108 Ga0207663_10025854 3300025916 Bacteria 3401
109 Ga0207657_10002618 3300025919 Bacteria 19440
110 Ga0207652_10004841 3300025921 Bacteria 10906
111 Ga0207652_10051372 3300025921 Bacteria 3534
112 Ga0207652_10068422 3300025921 Bacteria 3081
113 Ga0207652_10104045 3300025921 Bacteria 2511
114 Ga0207652_10127060 3300025921 Bacteria 2271
115 Ga0207687_10012765 3300025927 Bacteria 5488
116 Ga0207664_10145831 3300025929 Bacteria 2007
117 Ga0207691_10169331 3300025940 Bacteria 1913
118 Ga0207689_10040126 3300025942 Bacteria 3875
119 Ga0207661_10040391 3300025944 Bacteria 3667
120 Ga0207661_10044679 3300025944 Bacteria 3502
121 Ga0207667_10086748 3300025949 Bacteria 3238
122 Ga0207667_10148886 3300025949 Bacteria 2410
123 Ga0207667_10158046 3300025949 Bacteria 2332
124 Ga0207712_10007590 3300025961 Bacteria 6853
125 Ga0207712_10019320 3300025961 Bacteria 4448
126 Ga0207668_10027028 3300025972 Bacteria 3734
127 Ga0207668_10038677 3300025972 Bacteria 3204
128 Ga0207668_10040644 3300025972 Bacteria 3139
129 Ga0207703_10042844 3300026035 Bacteria 3631
130 Ga0207639_10020535 3300026041 Bacteria 4729
131 Ga0207648_10113624 3300026089 Bacteria 2378
132 Ga0207674_10024911 3300026116 Bacteria 6386
133 Ga0207674_10047088 3300026116 Bacteria 4423
134 Ga0207675_100160436 3300026118 Bacteria 2144
135 Ga0209389_1036628 3300027296 Bacteria 3934
136 Ga0209489_118858 3300027361 Bacteria 2533
137 Ga0209700_100067 3300027363 Bacteria 144074
138 Ga0268266_10025526 3300028379 Bacteria 5026
139 Ga0268265_10129049 3300028380 Bacteria 2097
140 Ga0268265_10137308 3300028380 Bacteria 2041
141 Ga0268264_10034612 3300028381 Bacteria 4156
142 Ga0307509_10066911 3300031507 Bacteria 3767
143 Ga0307508_10004755 3300031616 Bacteria 13126
144 Ga0307516_10000455 3300031730 Bacteria 54123
145 Ga0307516_10037600 3300031730 Bacteria 4837
146 Ga0307510_10041690 3300033180 Bacteria 5013
147 Ga0373935_0000221 3300035692 Bacteria 27665
148 Ga0373927_0014918 3300035695 Bacteria 5139
149 Ga0373927_0030569 3300035695 Bacteria 3513
150 Ga0373927_0045184 3300035695 Bacteria 2849
151 Ga0373925_0003263 3300037068 Bacteria 12637
152 Ga0373925_0055409 3300037068 Bacteria 2968
153 Ga0395905_0050271 3300037471 Bacteria 3906
154 Ga0436365_0800470 3300039437 Bacteria 2670
155 Ga0436363_1359834 3300039450 Bacteria 5034
156 Ga0495617_023337 3300046452 Bacteria 2090
157 Ga0495638_0022581 3300046460 Bacteria 4128
158 Ga0495580_0016448 3300046472 Bacteria 5550
159 Ga0495582_0014211 3300046473 Bacteria 4379
160 Ga0495639_0033791 3300046475 Bacteria 2285
161 Ga0495664_0031324 3300046477 Bacteria 3117
162 Ga0495664_0074156 3300046477 Bacteria 2035
163 Ga0495584_0048083 3300046491 Bacteria 2151
164 Ga0495606_0046607 3300046507 Bacteria 2864
165 Ga0495610_0030998 3300046512 Bacteria 2794
166 Ga0495616_0035428 3300046513 Bacteria 2583
167 Ga0495616_0050597 3300046513 Bacteria 2077
168 Ga0495618_0015308 3300046514 Bacteria 4680
169 Ga0495628_0044633 3300046516 Bacteria 3525
170 Ga0495630_0051716 3300046517 Bacteria 3075
171 Ga0495652_0101417 3300046529 Bacteria 2333
172 Ga0495640_0007257 3300046533 Bacteria 8733
173 Ga0495656_0004390 3300046615 Bacteria 4828
174 Ga0495588_0027671 3300046674 Bacteria 2834
175 Ga0495657_0092534 3300046675 Bacteria 1937
176 Ga0495669_0032714 3300046684 Bacteria 2286
177 Ga0495624_0033938 3300046690 Bacteria 3304
178 Ga0495670_0050051 3300046691 Bacteria 2091
179 Ga0495581_0022576 3300047315 Bacteria 3646
180 Ga0495674_0013945 3300047319 Bacteria 7539
181 Ga0495674_0020391 3300047319 Bacteria 6137
182 Ga0495674_0022785 3300047319 Bacteria 5772
183 Ga0495674_0072711 3300047319 Bacteria 2965
184 Ga0495680_0059247 3300047322 Bacteria 2957
185 Ga0495684_0031472 3300047471 Bacteria 4073
186 Ga0495593_0022823 3300047673 Bacteria 3482
187 Ga0496101_0048047 3300048904 Bacteria 3065
188 Ga0496103_0041861 3300048906 Bacteria 2817
189 Ga0496104_0102870 3300048907 Bacteria 2736
190 Ga0496104_0224914 3300048907 Bacteria 1789
191 Ga0496106_0060536 3300048909 Bacteria 2870
192 Ga0496107_0104321 3300048910 Bacteria 2080
193 Ga0496109_0092780 3300048912 Bacteria 2793
194 Ga0496114_0039619 3300048917 Bacteria 3899
195 Ga0496115_0149455 3300048918 Bacteria 1928
196 Ga0496121_0054924 3300048924 Bacteria 3323
197 Ga0496125_0117171 3300048928 Bacteria 1911
198 Ga0496126_0031511 3300048929 Bacteria 5008
199 Ga0496126_0048170 3300048929 Bacteria 3897
200 Ga0496126_0082601 3300048929 Bacteria 2838
201 nmdc:mga00v17_52386_c1 3300050491 Bacteria 2483
202 nmdc:mga0yw44_56095_c1 3300050492 Bacteria 2399
203 nmdc:mga06z11_19704_c1 3300050494 Bacteria 3107
204 nmdc:mga06z11_8165_c1 3300050494 Bacteria 4349
205 nmdc:mga07m45_28074_c1 3300050496 Bacteria 3106
206 nmdc:mga0n895_222749_c1 3300050512 Bacteria 1915
207 nmdc:mga0n895_64318_c1 3300050512 Bacteria 3628
208 Ga0495619_0024957 3300053085 Bacteria 3836
209 Ga0500645_009528 3300053730 Bacteria 3259
210 2513654496 2513237096 Bacteria 8722461
211 2513720145 2513237104 Bacteria 10034502
212 2513915325 2513237145 Bacteria 8979722
213 2524443384 2524023205 Bacteria 8918781
214 2824668298 2824661429 Bacteria 9877870
215 2824758251 2824753945 Bacteria 9787441
216 2824768232 2824763712 Bacteria 9792355
217 2847939042 2847930680 Bacteria 9342022
218 2879105696 2879099564 Bacteria 10442239
219 2885414708 2885409591 Bacteria 9235467
220 2889034617 2889033259 Bacteria 9099371
221 2904691293 2904690495 Bacteria 9412302
222 2904693301 2904690495 Bacteria 9412302
223 2904695581 2904690495 Bacteria 9412302
224 2904714674 2904711408 Bacteria 9771557
225 2906638678 2906635258 Bacteria 8601019
226 2906664080 2906660503 Bacteria 8595048
227 2908759060 2908756301 Bacteria 8864324
228 2908759377 2908756301 Bacteria 8864324
229 2917703320 2917699015 Bacteria 7043791
230 2922368508 2922361189 Bacteria 7436256
231 2922387556 2922386360 Bacteria 7017218
232 2929617251 2929615660 Bacteria 9193770
233 2929626955 2929624759 Bacteria 9339455
234 2932790579 2932784394 Bacteria 9704911
235 2932811000 2932809354 Bacteria 9135765
236 2932823670 2932818245 Bacteria 9955613
237 2932830210 2932828146 Bacteria 9745859
238 2933579208 2933577622 Bacteria 9116884
239 2935622564 2935616580 Bacteria 9032984
240 2935642636 2935638405 Bacteria 10015038
241 2935668060 2935665750 Bacteria 9571747
242 2935676093 2935675223 Bacteria 9928132
243 2935686077 2935684952 Bacteria 9590419
244 2935701297 2935694250 Bacteria 9291695
245 2935705920 2935703347 Bacteria 10242284
246 2935714629 2935713505 Bacteria 9608509
247 2935725248 2935722832 Bacteria 9608746
248 2935732392 2935732158 Bacteria 9706831
249 2935741771 2935741537 Bacteria 9707219
250 2935752042 2935750917 Bacteria 9590372
251 2935766390 2935760218 Bacteria 9817913
252 2935802918 2935801545 Bacteria 9301974
253 2935814236 2935810662 Bacteria 9401221
254 2935831373 2935827899 Bacteria 10038562
255 2935838233 2935837841 Bacteria 9454360
256 2935860813 2935855204 Bacteria 9035059
257 2935869850 2935864058 Bacteria 9784707
258 2935878731 2935873716 Bacteria 9632195
259 2935887950 2935883170 Bacteria 7964738
260 2935989779 2935984226 Bacteria 8302647
261 2935994873 2935992306 Bacteria 9802711
262 2936003516 2936002035 Bacteria 9362176
263 2936039792 2936037263 Bacteria 9446081
264 2940557155 2940556831 Bacteria 9590747
265 2941539099 2941538514 Bacteria 9402094
266 8006993232 8006984368 Bacteria 9651211
267 8017063569 8017057580 Bacteria 10023680
268 8019559788 8019555841 Bacteria 9642137
269 8019569894 8019565922 Bacteria 9639779
270 8019582888 8019576017 Bacteria 10049540
271 8019590683 8019586578 Bacteria 10212056
272 8019600666 8019597564 Bacteria 10041141
273 8019617880 8019608314 Bacteria 10042931
274 8055747134 8055742211 Bacteria 9226248
275 Ga0070683_100010912
276 JGI25404J52841_10000111
277 JGI25404J52841_10001413
278 JGI25404J52841_10004707
279 Ga0070658_10057093
280 Ga0070683_100011103
281 Ga0070683_100014558
282 Ga0070680_100021279
283 Ga0070680_100042331
284 Ga0070680_100058473
285 Ga0070660_100005468
286 Ga0070668_100008492
287 Ga0070668_100050433
288 Ga0070668_100050496
289 Ga0070709_10011838
290 Ga0070714_100028453
291 Ga0070713_100021383
292 Ga0070713_100154896
293 Ga0070713_100163329
294 Ga0070710_10020507
295 Ga0070711_100023648
296 Ga0070711_100030792
297 Ga0070694_100049929
298 Ga0070678_100096318
299 Ga0070681_10014525
300 Ga0070681_10032087
301 Ga0070681_10046304
302 Ga0070681_10098991
303 Ga0070679_100015371
304 Ga0070679_100018059
305 Ga0070679_100098248
306 Ga0070679_100102935
307 Ga0070684_100015276
308 Ga0068853_100006153
309 Ga0070665_100093349
310 Ga0068855_100038902
311 Ga0068855_100085155
312 Ga0068855_100198941
313 Ga0068857_100010917
314 Ga0068857_100088850
315 Ga0068854_100064180
316 Ga0068859_100043162
317 Ga0068851_10010287
318 Ga0068860_100156931
319 Ga0081455_10005311
320 Ga0081455_10006849
321 Ga0081455_10008960
322 Ga0081455_10020493
323 Ga0081455_10058656
324 Ga0081540_1000635
325 Ga0081540_1002176
326 Ga0081540_1002419
327 Ga0081540_1003501
328 Ga0081540_1003671
329 Ga0081540_1006285
330 Ga0081540_1007076
331 Ga0081540_1008658
332 Ga0081540_1008716
333 Ga0081540_1013276
334 Ga0081540_1016895
335 Ga0081540_1018351
336 Ga0081540_1049246
337 Ga0075364_10055463
338 Ga0070712_100015694
339 Ga0070712_100027072
340 Ga0070712_100047607
341 Ga0075367_10019502
342 Ga0075367_10034087
343 Ga0075369_10004943
344 Ga0075366_10009592
345 Ga0075366_10025399
346 Ga0075370_10031276
347 Ga0097620_100043163
348 Ga0099794_10001580
349 Ga0099794_10039921
350 Ga0105240_10017355
351 Ga0105241_10120331
352 Ga0105248_10060206
353 Ga0105237_10086682
354 Ga0105238_10012141
355 Ga0105238_10074446
356 Ga0105238_10077763
357 Ga0099796_10005714
358 Ga0099796_10016080
359 Ga0105239_10048511
360 Ga0105239_10056685
361 Ga0157369_10039701
362 Ga0157369_10045795
363 Ga0171462_1063
364 Ga0157378_10073625
365 Ga0163162_10083321
366 Ga0163162_10125930
367 Ga0163163_10050477
368 Ga0157379_10097777
369 Ga0213874_10003144
370 Ga0213876_10000626
371 Ga0209758_1007483
372 Ga0207426_1007460
373 Ga0207696_1016086
374 Ga0207707_10000359
375 Ga0207707_10002825
376 Ga0207707_10035778
377 Ga0207707_10047965
378 Ga0207695_10090864
379 Ga0207693_10011622
380 Ga0207693_10034525
381 Ga0207663_10014454
382 Ga0207663_10025854
383 Ga0207657_10002618
384 Ga0207652_10004841
385 Ga0207652_10051372
386 Ga0207652_10068422
387 Ga0207652_10104045
388 Ga0207652_10127060
389 Ga0207687_10012765
390 Ga0207664_10145831
391 Ga0207691_10169331
392 Ga0207689_10040126
393 Ga0207661_10040391
394 Ga0207661_10044679
395 Ga0207667_10086748
396 Ga0207667_10148886
397 Ga0207667_10158046
398 Ga0207712_10007590
399 Ga0207712_10019320
400 Ga0207668_10027028
401 Ga0207668_10038677
402 Ga0207668_10040644
403 Ga0207703_10042844
404 Ga0207639_10020535
405 Ga0207648_10113624
406 Ga0207674_10024911
407 Ga0207674_10047088
408 Ga0207675_100160436
409 Ga0209389_1036628
410 Ga0209489_118858
411 Ga0209700_100067
412 Ga0268266_10025526
413 Ga0268265_10129049
414 Ga0268265_10137308
415 Ga0268264_10034612
416 Ga0307509_10066911
417 Ga0307508_10004755
418 Ga0307516_10000455
419 Ga0307516_10037600
420 Ga0307510_10041690
421 Ga0373935_0000221
422 Ga0373927_0014918
423 Ga0373927_0030569
424 Ga0373927_0045184
425 Ga0373925_0003263
426 Ga0373925_0055409
427 Ga0395905_0050271
428 Ga0436365_0800470
429 Ga0436363_1359834
430 Ga0495617_023337
431 Ga0495638_0022581
432 Ga0495580_0016448
433 Ga0495582_0014211
434 Ga0495639_0033791
435 Ga0495664_0031324
436 Ga0495664_0074156
437 Ga0495584_0048083
438 Ga0495606_0046607
439 Ga0495610_0030998
440 Ga0495616_0035428
441 Ga0495616_0050597
442 Ga0495618_0015308
443 Ga0495628_0044633
444 Ga0495630_0051716
445 Ga0495652_0101417
446 Ga0495640_0007257
447 Ga0495656_0004390
448 Ga0495588_0027671
449 Ga0495657_0092534
450 Ga0495669_0032714
451 Ga0495624_0033938
452 Ga0495670_0050051
453 Ga0495581_0022576
454 Ga0495674_0013945
455 Ga0495674_0020391
456 Ga0495674_0022785
457 Ga0495674_0072711
458 Ga0495680_0059247
459 Ga0495684_0031472
460 Ga0495593_0022823
461 Ga0496101_0048047
462 Ga0496103_0041861
463 Ga0496104_0102870
464 Ga0496104_0224914
465 Ga0496106_0060536
466 Ga0496107_0104321
467 Ga0496109_0092780
468 Ga0496114_0039619
469 Ga0496115_0149455
470 Ga0496121_0054924
471 Ga0496125_0117171
472 Ga0496126_0031511
473 Ga0496126_0048170
474 Ga0496126_0082601
475 nmdc:mga00v17_52386_c1
476 nmdc:mga0yw44_56095_c1
477 nmdc:mga06z11_19704_c1
478 nmdc:mga06z11_8165_c1
479 nmdc:mga07m45_28074_c1
480 nmdc:mga0n895_222749_c1
481 nmdc:mga0n895_64318_c1
482 Ga0495619_0024957
483 Ga0500645_009528
484 2513654496
485 2513720145
486 2513915325
487 2524443384
488 2824668298
489 2824758251
490 2824768232
491 2847939042
492 2879105696
493 2885414708
494 2889034617
495 2904691293
496 2904693301
497 2904695581
498 2904714674
499 2906638678
500 2906664080
501 2908759060
502 2908759377
503 2917703320
504 2922368508
505 2922387556
506 2929617251
507 2929626955
508 2932790579
509 2932811000
510 2932823670
511 2932830210
512 2933579208
513 2935622564
514 2935642636
515 2935668060
516 2935676093
517 2935686077
518 2935701297
519 2935705920
520 2935714629
521 2935725248
522 2935732392
523 2935741771
524 2935752042
525 2935766390
526 2935802918
527 2935814236
528 2935831373
529 2935838233
530 2935860813
531 2935869850
532 2935878731
533 2935887950
534 2935989779
535 2935994873
536 2936003516
537 2936039792
538 2940557155
539 2941539099
540 8006993232
541 8017063569
542 8019559788
543 8019569894
544 8019582888
545 8019590683
546 8019600666
547 8019617880
548 8055747134

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13181

TPR_8

Tetratricopeptide repeat

529

560

0.95

PF13431

TPR_17

Tetratricopeptide repeat

515

548

0.94

PF13432

TPR_16

Tetratricopeptide repeat

501

561

0.93

PF13432

TPR_16

Tetratricopeptide repeat

570

630

0.93

PF00211

Guanylate_cyc

Adenylate and Guanylate cyclase catalytic domain

85

248

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.9592 463 526
4wp9-assembly1.cif.gz_B crystal structure of adenylyl cyclase ma1120 from mycobacterium avium bound to 2'5'-dd-3'-atp, calcium and magnesium ion 0.9383 22 181
1ybu-assembly2.cif.gz_C mycobacterium tuberculosis adenylyl cyclase rv1900c chd, in complex with a substrate analog. 0.9361 20 181
3mr7-assembly1.cif.gz_B crystal structure of adenylate/guanylate cyclase/hydrolase from silicibacter pomeroyi 0.9346 19 181
5d15-assembly1.cif.gz_A crystal structure of an adenylyl cyclase ma1120 from mycobacterium avium in complex with atp and calcium ion 0.9344 22 181
ID Description Score Start End Superfamily
1ybuC00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Nucleotide cyclase, GGDEF domain 0.9361 20 181 3.30.70.1230
4n3cA01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9146 425 526 1.25.40.10
4j8eB00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9138 433 528 1.25.40.10
af_P94982_82_280_3.30.70.1230 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Nucleotide cyclase, GGDEF domain 0.9109 23 155 3.30.70.1230
3kd7B00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9098 433 526 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A529IIZ6-F1-model_v4 deleted 0.9587 22 113
AF-A0A525JM45-F1-model_v4 Adenylate/guanylate cyclase domain-containing protein 0.9533 20 141 GO:0004016
GO:0006171
GO:0035556
AF-A0A537VCJ8-F1-model_v4 Adenylate/guanylate cyclase domain-containing protein 0.9526 21 181 GO:0004016
GO:0009190
GO:0035556
AF-A0A7W1F7H8-F1-model_v4 Adenylate/guanylate cyclase domain-containing protein 0.9434 21 181 GO:0004016
GO:0009190
GO:0035556
AF-A0A2P6FXT9-F1-model_v4 deleted 0.9388 21 181

Map