F371694

General Info

Members Datasets Scaffolds Average Seq Length
263 145 263 565

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100028265|Ga0070698_1000282652
Length 640
Sequence MSYPECLALVLRIPQRRLSTSNLLTNLISENTPLLGLRGLVTALVEGGYNTRVHSSNDARYQSGDRSPHSKEKRLYTRALYQRVIGVCWIILVVATACIGQQFSYSREFETPETISVFIKNRDGRVSVVADEEFQKKARVEARSAGIPVAETDIVAAANGGKLEIEVKQRREDDRIDLVVRIPVRSKVEIESRAGAVDVIGNLESALVRTDTGTIHADVPLETLKYDFLWEASKPRYMSDVPLNDVKEKAGGWFRLSGKLGDKDAKKEERVALDFRTQRGVVLLNVDPSMAPADLRERPLTEAARAIVRSGDPQLVEAIRKVSPKMFGDYAKTLPPPEREPTLRKGSSPGQIVSSVAPQLLRFNASVTDRNGRAIPGMKETDFTVFENGIERRVTNVSPANEPFNLVLLLDVSGSVQERMDFIRKAARDFLRTASPQDRISIISFRDDIQVISDFSTDRAMLSRKLDEIDAGGGTALYDALGYILAQPVKQMQGERTAVVVMSDGDDNKSFLPFPAILEALSESGALIYPLYVPSGLIPESSVPKPEITIDPLRTRYLTLTTRAEGEGRKLAAASGGVYYPIRRIEDLQKAYNDVVLQLRTAYTITYASNSVSSTAPRIRLRTNRDGASVRLSPVIGVNP

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
51 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
121 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
122 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300042117 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0415F_E14_082316_1937 Metagenome Rhizosphere
127 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
130 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
131 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
139 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0
Rhizoplane 1.9
Rhizosphere 97.34
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000060 3300002459 Bacteria 61937
2 JGI25406J46586_10001684 3300003203 Bacteria 10432
3 Ga0065714_10064657 3300005288 Bacteria 25431
4 Ga0065704_10004323 3300005289 Bacteria 4573
5 Ga0065704_10094088 3300005289 Unclassified 2555
6 Ga0065712_10000176 3300005290 Bacteria 26017
7 Ga0065712_10013626 3300005290 Unclassified 2282
8 Ga0065715_10003191 3300005293 Bacteria 5855
9 Ga0065715_10095170 3300005293 Unclassified 4147
10 Ga0065715_10100166 3300005293 Unclassified 3312
11 Ga0065715_10108607 3300005293 Bacteria 2710
12 Ga0070690_100002525 3300005330 Bacteria 9842
13 Ga0070690_100003497 3300005330 Bacteria 8594
14 Ga0070670_100000932 3300005331 Bacteria 22941
15 Ga0070670_100063854 3300005331 Bacteria 3159
16 Ga0070670_100095039 3300005331 Unclassified 2563
17 Ga0070677_10019863 3300005333 Bacteria 2440
18 Ga0068869_100009951 3300005334 Bacteria 6181
19 Ga0068869_100098588 3300005334 Bacteria 2208
20 Ga0070680_100017293 3300005336 Bacteria 5682
21 Ga0070682_100000051 3300005337 Bacteria 123476
22 Ga0070682_100001497 3300005337 Bacteria 13091
23 Ga0070682_100037847 3300005337 Bacteria 2956
24 Ga0070687_100000462 3300005343 Bacteria 13672
25 Ga0070669_100001235 3300005353 Bacteria 18520
26 Ga0070669_100010969 3300005353 Bacteria 6430
27 Ga0070673_100096853 3300005364 Bacteria 2422
28 Ga0070659_100005180 3300005366 Bacteria 9356
29 Ga0070703_10000915 3300005406 Bacteria 9391
30 Ga0070703_10008055 3300005406 Bacteria 2962
31 Ga0070701_10012725 3300005438 Bacteria 3802
32 Ga0070701_10057952 3300005438 Bacteria 2031
33 Ga0070705_100012085 3300005440 Bacteria 4377
34 Ga0070705_100034835 3300005440 Unclassified 2818
35 Ga0070700_100000055 3300005441 Bacteria 83561
36 Ga0070700_100044688 3300005441 Bacteria 2730
37 Ga0070694_100005098 3300005444 Bacteria 7921
38 Ga0070694_100014769 3300005444 Bacteria 4893
39 Ga0070694_100019206 3300005444 Bacteria 4346
40 Ga0070694_100028677 3300005444 Bacteria 3624
41 Ga0070708_100005104 3300005445 Bacteria 10394
42 Ga0070708_100103172 3300005445 Unclassified 2614
43 Ga0070662_100066687 3300005457 Bacteria 2641
44 Ga0070662_100084046 3300005457 Bacteria 2377
45 Ga0070681_10161930 3300005458 Bacteria 2161
46 Ga0070685_10007820 3300005466 Bacteria 5471
47 Ga0070706_100000138 3300005467 Bacteria 91724
48 Ga0070706_100008151 3300005467 Bacteria 9773
49 Ga0070706_100119772 3300005467 Bacteria 2453
50 Ga0070706_100133668 3300005467 Bacteria 2315
51 Ga0070707_100043859 3300005468 Bacteria 4281
52 Ga0070698_100016811 3300005471 Bacteria 7716
53 Ga0070698_100028265 3300005471 Bacteria 5827
54 Ga0070698_100036112 3300005471 Bacteria 5108
55 Ga0070699_100002884 3300005518 Bacteria 15318
56 Ga0070699_100016660 3300005518 Bacteria 6308
57 Ga0070699_100022538 3300005518 Bacteria 5428
58 Ga0070699_100090037 3300005518 Bacteria 2681
59 Ga0070699_100098625 3300005518 Unclassified 2560
60 Ga0070679_100021929 3300005530 Bacteria 6238
61 Ga0070679_100059503 3300005530 Bacteria 3808
62 Ga0070679_100164146 3300005530 Bacteria 2195
63 Ga0070684_100129436 3300005535 Bacteria 2276
64 Ga0070697_100000176 3300005536 Bacteria 52306
65 Ga0070697_100001824 3300005536 Bacteria 16279
66 Ga0070697_100003300 3300005536 Bacteria 12397
67 Ga0070697_100103057 3300005536 Bacteria 2372
68 Ga0070686_100002761 3300005544 Bacteria 9669
69 Ga0070686_100005328 3300005544 Bacteria 7116
70 Ga0070695_100037224 3300005545 Bacteria 3066
71 Ga0070695_100064152 3300005545 Unclassified 2389
72 Ga0070696_100015576 3300005546 Bacteria 5108
73 Ga0070696_100036666 3300005546 Bacteria 3382
74 Ga0070693_100043414 3300005547 Bacteria 2539
75 Ga0070664_100042815 3300005564 Bacteria 3821
76 Ga0068857_100020209 3300005577 Bacteria 5855
77 Ga0068857_100022006 3300005577 Bacteria 5611
78 Ga0068854_100054649 3300005578 Bacteria 2873
79 Ga0068856_100027807 3300005614 Bacteria 5517
80 Ga0070702_100018248 3300005615 Unclassified 3636
81 Ga0070702_100036698 3300005615 Unclassified 2717
82 Ga0070702_100075857 3300005615 Bacteria 1999
83 Ga0068859_100091410 3300005617 Unclassified 3094
84 Ga0068859_100104301 3300005617 Bacteria 2894
85 Ga0068859_100194268 3300005617 Unclassified 2114
86 Ga0068864_100003176 3300005618 Bacteria 13587
87 Ga0068864_100033058 3300005618 Bacteria 4396
88 Ga0068864_100091923 3300005618 Bacteria 2678
89 Ga0068861_100049774 3300005719 Bacteria 3174
90 Ga0068851_10003226 3300005834 Bacteria 7227
91 Ga0068863_100016031 3300005841 Bacteria 7186
92 Ga0068863_100021449 3300005841 Bacteria 6165
93 Ga0068863_100035305 3300005841 Unclassified 4762
94 Ga0068860_100162237 3300005843 Unclassified 2155
95 Ga0068862_100006009 3300005844 Bacteria 10110
96 Ga0068862_100017053 3300005844 Bacteria 6043
97 Ga0068862_100087181 3300005844 Bacteria 2715
98 Ga0068862_100118713 3300005844 Unclassified 2328
99 Ga0081539_10000279 3300005985 Bacteria 115766
100 Ga0081539_10000695 3300005985 Bacteria 67496
101 Ga0081539_10000956 3300005985 Bacteria 54160
102 Ga0070715_10000002 3300006163 Bacteria 389554
103 Ga0070716_100000004 3300006173 Bacteria 296614
104 Ga0097621_100003566 3300006237 Bacteria 10754
105 Ga0097621_100005199 3300006237 Bacteria 9144
106 Ga0097621_100065108 3300006237 Bacteria 2999
107 Ga0068871_100018657 3300006358 Bacteria 5279
108 Ga0068871_100041068 3300006358 Bacteria 3707
109 Ga0075433_10019239 3300006852 Bacteria 5686
110 Ga0075429_100018120 3300006880 Bacteria 6093
111 Ga0097620_100091411 3300006931 Unclassified 3094
112 Ga0097620_100104306 3300006931 Bacteria 2894
113 Ga0097620_100194274 3300006931 Unclassified 2114
114 Ga0075435_100001548 3300007076 Bacteria 14818
115 Ga0105240_10032254 3300009093 Bacteria 6785
116 Ga0111539_10004547 3300009094 Bacteria 18137
117 Ga0111539_10006832 3300009094 Bacteria 14667
118 Ga0105247_10000358 3300009101 Bacteria 39248
119 Ga0114129_10009579 3300009147 Bacteria 13818
120 Ga0114129_10016346 3300009147 Bacteria 10563
121 Ga0114129_10046060 3300009147 Bacteria 6130
122 Ga0114129_10075479 3300009147 Bacteria 4693
123 Ga0114129_10099383 3300009147 Unclassified 4027
124 Ga0114129_10116326 3300009147 Bacteria 3685
125 Ga0114129_10222849 3300009147 Unclassified 2543
126 Ga0105243_10004417 3300009148 Bacteria 11120
127 Ga0105243_10043920 3300009148 Unclassified 3504
128 Ga0105241_10107899 3300009174 Unclassified 2225
129 Ga0105242_10061403 3300009176 Bacteria 3091
130 Ga0105248_10001808 3300009177 Bacteria 23766
131 Ga0105248_10029152 3300009177 Bacteria 6155
132 Ga0105248_10036222 3300009177 Bacteria 5518
133 Ga0105237_10000662 3300009545 Bacteria 47667
134 Ga0105238_10005026 3300009551 Bacteria 13073
135 Ga0105238_10019754 3300009551 Bacteria 6860
136 Ga0105249_10001124 3300009553 Bacteria 23799
137 Ga0105249_10039958 3300009553 Bacteria 4260
138 Ga0105249_10092084 3300009553 Unclassified 2838
139 Ga0157374_10120351 3300013296 Bacteria 2533
140 Ga0157378_10002620 3300013297 Bacteria 16015
141 Ga0157378_10157488 3300013297 Bacteria 2121
142 Ga0163162_10001246 3300013306 Bacteria 23799
143 Ga0163162_10002805 3300013306 Bacteria 16570
144 Ga0163162_10044173 3300013306 Bacteria 4462
145 Ga0163162_10097949 3300013306 Bacteria 3022
146 Ga0157372_10008942 3300013307 Bacteria 10645
147 Ga0157375_10086960 3300013308 Unclassified 3177
148 Ga0163163_10002597 3300014325 Bacteria 15311
149 Ga0163163_10014159 3300014325 Bacteria 7326
150 Ga0163163_10022852 3300014325 Bacteria 5929
151 Ga0163163_10037274 3300014325 Bacteria 4729
152 Ga0163163_10218748 3300014325 Bacteria 1953
153 Ga0157380_10002050 3300014326 Bacteria 13483
154 Ga0157380_10015407 3300014326 Bacteria 5619
155 Ga0157380_10026949 3300014326 Bacteria 4366
156 Ga0157380_10037832 3300014326 Unclassified 3742
157 Ga0157377_10023498 3300014745 Unclassified 3268
158 Ga0163161_10017810 3300017792 Unclassified 4977
159 Ga0207697_10014283 3300025315 Unclassified 3295
160 Ga0207656_10000427 3300025321 Bacteria 14193
161 Ga0207653_10000878 3300025885 Bacteria 9979
162 Ga0207710_10000360 3300025900 Bacteria 32103
163 Ga0207688_10029850 3300025901 Unclassified 3005
164 Ga0207647_10011775 3300025904 Bacteria 6118
165 Ga0207685_10000002 3300025905 Bacteria 438088
166 Ga0207643_10002989 3300025908 Bacteria 9113
167 Ga0207684_10000023 3300025910 Bacteria 334838
168 Ga0207684_10003122 3300025910 Bacteria 16333
169 Ga0207684_10019373 3300025910 Bacteria 5822
170 Ga0207707_10000006 3300025912 Bacteria 374131
171 Ga0207707_10008074 3300025912 Bacteria 9140
172 Ga0207707_10011551 3300025912 Bacteria 7689
173 Ga0207707_10103982 3300025912 Bacteria 2482
174 Ga0207695_10108633 3300025913 Bacteria 2758
175 Ga0207671_10006471 3300025914 Bacteria 10428
176 Ga0207671_10114193 3300025914 Bacteria 2058
177 Ga0207660_10012007 3300025917 Bacteria 5657
178 Ga0207662_10028989 3300025918 Bacteria 3204
179 Ga0207652_10000216 3300025921 Bacteria 61049
180 Ga0207652_10104550 3300025921 Bacteria 2505
181 Ga0207646_10042335 3300025922 Bacteria 4091
182 Ga0207646_10079818 3300025922 Bacteria 2926
183 Ga0207681_10002302 3300025923 Bacteria 12145
184 Ga0207681_10030401 3300025923 Bacteria 3521
185 Ga0207650_10000001 3300025925 Bacteria 1545726
186 Ga0207650_10000979 3300025925 Bacteria 21453
187 Ga0207644_10011498 3300025931 Bacteria 5858
188 Ga0207706_10065636 3300025933 Bacteria 3196
189 Ga0207686_10033888 3300025934 Unclassified 3051
190 Ga0207709_10001778 3300025935 Bacteria 14459
191 Ga0207709_10023912 3300025935 Bacteria 3483
192 Ga0207670_10000275 3300025936 Bacteria 31956
193 Ga0207665_10000006 3300025939 Bacteria 184957
194 Ga0207691_10003452 3300025940 Bacteria 15374
195 Ga0207711_10002998 3300025941 Bacteria 14756
196 Ga0207711_10023522 3300025941 Bacteria 5157
197 Ga0207711_10074703 3300025941 Unclassified 2948
198 Ga0207689_10002981 3300025942 Bacteria 15621
199 Ga0207689_10025322 3300025942 Unclassified 4972
200 Ga0207689_10065711 3300025942 Bacteria 2983
201 Ga0207689_10089910 3300025942 Bacteria 2522
202 Ga0207712_10000206 3300025961 Bacteria 59587
203 Ga0207712_10009473 3300025961 Bacteria 6162
204 Ga0207640_10011387 3300025981 Bacteria 5035
205 Ga0207640_10121375 3300025981 Bacteria 1873
206 Ga0207658_10057851 3300025986 Unclassified 2883
207 Ga0207703_10045146 3300026035 Bacteria 3543
208 Ga0207703_10067030 3300026035 Bacteria 2954
209 Ga0207703_10075261 3300026035 Unclassified 2798
210 Ga0207708_10000026 3300026075 Bacteria 168232
211 Ga0207708_10016563 3300026075 Bacteria 5544
212 Ga0207708_10067440 3300026075 Bacteria 2737
213 Ga0207641_10012182 3300026088 Bacteria 7058
214 Ga0207648_10007997 3300026089 Bacteria 10313
215 Ga0207676_10001186 3300026095 Bacteria 19551
216 Ga0207676_10003266 3300026095 Bacteria 11542
217 Ga0207676_10083306 3300026095 Bacteria 2604
218 Ga0207674_10000192 3300026116 Bacteria 75255
219 Ga0207674_10062880 3300026116 Bacteria 3748
220 Ga0207675_100001329 3300026118 Bacteria 24766
221 Ga0207675_100006393 3300026118 Bacteria 11164
222 Ga0207675_100058558 3300026118 Bacteria 3595
223 Ga0207675_100064560 3300026118 Bacteria 3422
224 Ga0207675_100073238 3300026118 Bacteria 3205
225 Ga0207675_100121749 3300026118 Bacteria 2469
226 Ga0207683_10042431 3300026121 Bacteria 3973
227 Ga0207428_10001935 3300027907 Bacteria 20989
228 Ga0268266_10048937 3300028379 Bacteria 3624
229 Ga0268265_10018862 3300028380 Bacteria 4787
230 Ga0268265_10079000 3300028380 Unclassified 2590
231 Ga0307408_100077540 3300031548 Bacteria 2474
232 Ga0307411_10042686 3300032005 Bacteria 2896
233 Ga0373949_0003249 3300035090 Bacteria 3923
234 Ga0373951_0002098 3300035091 Bacteria 5111
235 Ga0395900_0110125 3300037418 Unclassified 2829
236 Ga0395898_0059522 3300037466 Bacteria 3715
237 Ga0436365_1027055 3300039437 Bacteria 18711
238 Ga0450913_000117 3300042117 Bacteria 2249
239 Ga0439458_0000541 3300042157 Bacteria 9701
240 Ga0495632_0005991 3300046519 Bacteria 7912
241 Ga0495663_0000083 3300046525 Bacteria 43451
242 Ga0495598_0000055 3300046537 Bacteria 17943
243 Ga0495621_0000137 3300046539 Bacteria 15458
244 Ga0496102_0060803 3300048905 Unclassified 3456
245 Ga0496104_0014869 3300048907 Bacteria 7035
246 Ga0496106_0045836 3300048909 Bacteria 3285
247 Ga0496108_0086919 3300048911 Unclassified 2655
248 Ga0496112_0093390 3300048915 Unclassified 2979
249 Ga0501038_0000710 3300049574 Bacteria 29744
250 Ga0501235_010049 3300049669 Bacteria 2069
251 Ga0501257_001178 3300049686 Bacteria 5349
252 nmdc:mga05p37_180634_c1 3300050507 Bacteria 2567
253 nmdc:mga05p37_26644_c1 3300050507 Bacteria 7029
254 nmdc:mga05p37_64124_c1 3300050507 Bacteria 4521
255 nmdc:mga08y16_2591_c1 3300050511 Bacteria 18568
256 nmdc:mga08y16_3238_c1 3300050511 Bacteria 16861
257 nmdc:mga0n895_132147_c1 3300050512 Unclassified 2521
258 nmdc:mga0n895_51946_c1 3300050512 Bacteria 4023
259 nmdc:mga0rr50_47672_c1 3300050513 Bacteria 3163
260 nmdc:mga0a205_151502_c1 3300050515 Bacteria 2218
261 nmdc:mga0a205_15345_c1 3300050515 Bacteria 7158
262 nmdc:mga0a205_48507_c1 3300050515 Bacteria 4098
263 Ga0500616_0001684 3300053153 Bacteria 20357

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025939 Ga0207665_10000006 Ga0207665_1000000690 500
2 3300025921 Ga0207652_10104550 Ga0207652_101045502 504
3 3300014326 Ga0157380_10037832 Ga0157380_100378321 510
4 3300005518 Ga0070699_100022538 Ga0070699_1000225384 513
5 3300013308 Ga0157375_10086960 Ga0157375_100869602 517
6 3300005614 Ga0068856_100027807 Ga0068856_1000278075 521
7 3300009553 Ga0105249_10001124 Ga0105249_100011242 521
8 3300013306 Ga0163162_10001246 Ga0163162_100012462 521
9 3300025914 Ga0207671_10114193 Ga0207671_101141931 521
10 3300025961 Ga0207712_10000206 Ga0207712_1000020620 521
11 3300048905 Ga0496102_0060803 Ga0496102_0060803_152_1882 521
12 3300048907 Ga0496104_0014869 Ga0496104_0014869_5155_6885 521
13 3300005518 Ga0070699_100098625 Ga0070699_1000986252 527
14 3300050507 nmdc:mga05p37_180634_c1 nmdc:mga05p37_180634_c1_69_1679 527
15 3300005336 Ga0070680_100017293 Ga0070680_1000172931 531
16 3300005458 Ga0070681_10161930 Ga0070681_101619301 531
17 3300005530 Ga0070679_100021929 Ga0070679_1000219296 531
18 3300025912 Ga0207707_10000006 Ga0207707_10000006171 531
19 3300025917 Ga0207660_10012007 Ga0207660_100120072 531
20 3300025921 Ga0207652_10000216 Ga0207652_1000021633 531
21 3300013297 Ga0157378_10157488 Ga0157378_101574882 533
22 3300005467 Ga0070706_100133668 Ga0070706_1001336681 534
23 3300005293 Ga0065715_10100166 Ga0065715_101001662 535
24 3300005334 Ga0068869_100009951 Ga0068869_1000099513 535
25 3300005564 Ga0070664_100042815 Ga0070664_1000428152 535
26 3300005615 Ga0070702_100036698 Ga0070702_1000366982 535
27 3300005618 Ga0068864_100003176 Ga0068864_1000031768 535
28 3300006237 Ga0097621_100003566 Ga0097621_1000035669 535
29 3300009177 Ga0105248_10001808 Ga0105248_1000180810 535
30 3300013296 Ga0157374_10120351 Ga0157374_101203512 535
31 3300013297 Ga0157378_10002620 Ga0157378_100026207 535
32 3300013306 Ga0163162_10002805 Ga0163162_100028052 535
33 3300014325 Ga0163163_10022852 Ga0163163_100228522 535
34 3300025931 Ga0207644_10011498 Ga0207644_100114981 535
35 3300025941 Ga0207711_10074703 Ga0207711_100747032 535
36 3300025942 Ga0207689_10025322 Ga0207689_100253222 535
37 3300025986 Ga0207658_10057851 Ga0207658_100578512 535
38 3300026035 Ga0207703_10075261 Ga0207703_100752611 535
39 3300026095 Ga0207676_10003266 Ga0207676_100032667 535
40 3300028379 Ga0268266_10048937 Ga0268266_100489372 535
41 3300005985 Ga0081539_10000956 Ga0081539_1000095661 536
42 3300006173 Ga0070716_100000004 Ga0070716_100000004122 536
43 3300005545 Ga0070695_100037224 Ga0070695_1000372242 538
44 3300005618 Ga0068864_100091923 Ga0068864_1000919232 538
45 3300009177 Ga0105248_10029152 Ga0105248_100291525 538
46 3300025941 Ga0207711_10023522 Ga0207711_100235224 538
47 3300009147 Ga0114129_10116326 Ga0114129_101163263 539
48 3300005406 Ga0070703_10008055 Ga0070703_100080552 542
49 3300005615 Ga0070702_100018248 Ga0070702_1000182483 543
50 3300006237 Ga0097621_100005199 Ga0097621_1000051996 543
51 3300025904 Ga0207647_10011775 Ga0207647_100117755 543
52 3300025922 Ga0207646_10042335 Ga0207646_100423352 543
53 3300026035 Ga0207703_10067030 Ga0207703_100670302 543
54 3300046519 Ga0495632_0005991 Ga0495632_0005991_4948_6597 543
55 3300005438 Ga0070701_10012725 Ga0070701_100127252 544
56 3300005536 Ga0070697_100103057 Ga0070697_1001030572 544
57 3300005844 Ga0068862_100017053 Ga0068862_1000170532 544
58 3300009553 Ga0105249_10039958 Ga0105249_100399582 544
59 3300028380 Ga0268265_10018862 Ga0268265_100188624 544
60 3300050515 nmdc:mga0a205_151502_c1 nmdc:mga0a205_151502_c1_305_1942 544
61 3300005985 Ga0081539_10000695 Ga0081539_1000069517 545
62 3300006358 Ga0068871_100041068 Ga0068871_1000410682 545
63 3300037418 Ga0395900_0110125 Ga0395900_0110125_287_1924 545
64 3300037466 Ga0395898_0059522 Ga0395898_0059522_471_2108 545
65 3300049686 Ga0501257_001178 Ga0501257_001178_1633_3270 545
66 3300005445 Ga0070708_100005104 Ga0070708_1000051041 546
67 3300005518 Ga0070699_100016660 Ga0070699_1000166606 546
68 3300009148 Ga0105243_10004417 Ga0105243_100044177 546
69 3300009176 Ga0105242_10061403 Ga0105242_100614032 546
70 3300009553 Ga0105249_10092084 Ga0105249_100920842 546
71 3300014745 Ga0157377_10023498 Ga0157377_100234983 546
72 3300048909 Ga0496106_0045836 Ga0496106_0045836_1062_2741 546
73 3300005366 Ga0070659_100005180 Ga0070659_1000051805 547
74 3300005457 Ga0070662_100084046 Ga0070662_1000840461 547
75 3300005467 Ga0070706_100008151 Ga0070706_1000081518 547
76 3300005530 Ga0070679_100059503 Ga0070679_1000595033 547
77 3300005535 Ga0070684_100129436 Ga0070684_1001294362 547
78 3300005536 Ga0070697_100003300 Ga0070697_1000033002 547
79 3300005577 Ga0068857_100020209 Ga0068857_1000202093 547
80 3300005843 Ga0068860_100162237 Ga0068860_1001622372 547
81 3300009551 Ga0105238_10019754 Ga0105238_100197542 547
82 3300014325 Ga0163163_10037274 Ga0163163_100372742 547
83 3300025910 Ga0207684_10003122 Ga0207684_1000312210 547
84 3300025912 Ga0207707_10011551 Ga0207707_100115517 547
85 3300025922 Ga0207646_10079818 Ga0207646_100798181 547
86 3300026116 Ga0207674_10000192 Ga0207674_1000019237 547
87 3300026118 Ga0207675_100001329 Ga0207675_1000013297 547
88 3300005546 Ga0070696_100036666 Ga0070696_1000366662 548
89 3300009147 Ga0114129_10009579 Ga0114129_1000957910 548
90 3300013306 Ga0163162_10097949 Ga0163162_100979491 548
91 3300050507 nmdc:mga05p37_26644_c1 nmdc:mga05p37_26644_c1_2389_4122 548
92 3300005438 Ga0070701_10057952 Ga0070701_100579521 549
93 3300053153 Ga0500616_0001684 Ga0500616_0001684_3609_5315 549
94 3300003203 JGI25406J46586_10001684 JGI25406J46586_100016848 550
95 3300005293 Ga0065715_10095170 Ga0065715_100951701 550
96 3300005331 Ga0070670_100095039 Ga0070670_1000950392 550
97 3300005985 Ga0081539_10000279 Ga0081539_1000027970 550
98 3300009101 Ga0105247_10000358 Ga0105247_1000035832 550
99 3300025900 Ga0207710_10000360 Ga0207710_1000036016 550
100 3300050513 nmdc:mga0rr50_47672_c1 nmdc:mga0rr50_47672_c1_656_2308 550
101 3300014326 Ga0157380_10002050 Ga0157380_100020504 551
102 3300005289 Ga0065704_10004323 Ga0065704_100043232 552
103 3300005337 Ga0070682_100037847 Ga0070682_1000378472 552
104 3300009094 Ga0111539_10004547 Ga0111539_100045473 552
105 3300014325 Ga0163163_10218748 Ga0163163_102187481 552
106 3300027907 Ga0207428_10001935 Ga0207428_1000193516 552
107 3300050511 nmdc:mga08y16_2591_c1 nmdc:mga08y16_2591_c1_9982_11670 552
108 3300050512 nmdc:mga0n895_132147_c1 nmdc:mga0n895_132147_c1_529_2217 552
109 3300005337 Ga0070682_100000051 Ga0070682_10000005140 554
110 3300005468 Ga0070707_100043859 Ga0070707_1000438592 554
111 3300006163 Ga0070715_10000002 Ga0070715_10000002211 554
112 3300025905 Ga0207685_10000002 Ga0207685_10000002233 554
113 3300039437 Ga0436365_1027055 Ga0436365_1027055_8897_10633 554
114 3300046525 Ga0495663_0000083 Ga0495663_0000083_27639_29366 554
115 3300046537 Ga0495598_0000055 Ga0495598_0000055_8449_10176 554
116 3300046539 Ga0495621_0000137 Ga0495621_0000137_11083_12810 554
117 3300048911 Ga0496108_0086919 Ga0496108_0086919_120_1844 554
118 3300005289 Ga0065704_10094088 Ga0065704_100940881 555
119 3300005518 Ga0070699_100090037 Ga0070699_1000900372 555
120 3300005536 Ga0070697_100000176 Ga0070697_10000017628 555
121 3300042117 Ga0450913_000117 Ga0450913_000117_357_2144 555
122 3300025910 Ga0207684_10019373 Ga0207684_100193734 557
123 3300005290 Ga0065712_10013626 Ga0065712_100136261 558
124 3300005293 Ga0065715_10003191 Ga0065715_100031912 558
125 3300005330 Ga0070690_100002525 Ga0070690_1000025258 558
126 3300005330 Ga0070690_100003497 Ga0070690_1000034974 558
127 3300005334 Ga0068869_100098588 Ga0068869_1000985882 558
128 3300005343 Ga0070687_100000462 Ga0070687_1000004628 558
129 3300005444 Ga0070694_100028677 Ga0070694_1000286772 558
130 3300005466 Ga0070685_10007820 Ga0070685_100078204 558
131 3300005467 Ga0070706_100119772 Ga0070706_1001197721 558
132 3300005471 Ga0070698_100016811 Ga0070698_1000168115 558
133 3300005536 Ga0070697_100001824 Ga0070697_1000018249 558
134 3300005544 Ga0070686_100002761 Ga0070686_1000027614 558
135 3300005544 Ga0070686_100005328 Ga0070686_1000053282 558
136 3300005545 Ga0070695_100064152 Ga0070695_1000641521 558
137 3300005617 Ga0068859_100091410 Ga0068859_1000914102 558
138 3300005719 Ga0068861_100049774 Ga0068861_1000497741 558
139 3300005841 Ga0068863_100035305 Ga0068863_1000353053 558
140 3300005844 Ga0068862_100118713 Ga0068862_1001187132 558
141 3300006237 Ga0097621_100065108 Ga0097621_1000651082 558
142 3300006358 Ga0068871_100018657 Ga0068871_1000186575 558
143 3300006931 Ga0097620_100091411 Ga0097620_1000914112 558
144 3300009147 Ga0114129_10016346 Ga0114129_100163465 558
145 3300009147 Ga0114129_10099383 Ga0114129_100993832 558
146 3300009174 Ga0105241_10107899 Ga0105241_101078992 558
147 3300014326 Ga0157380_10026949 Ga0157380_100269494 558
148 3300017792 Ga0163161_10017810 Ga0163161_100178102 558
149 3300025315 Ga0207697_10014283 Ga0207697_100142832 558
150 3300025901 Ga0207688_10029850 Ga0207688_100298501 558
151 3300025918 Ga0207662_10028989 Ga0207662_100289891 558
152 3300025934 Ga0207686_10033888 Ga0207686_100338882 558
153 3300025940 Ga0207691_10003452 Ga0207691_1000345213 558
154 3300025942 Ga0207689_10002981 Ga0207689_1000298112 558
155 3300025942 Ga0207689_10089910 Ga0207689_100899102 558
156 3300026089 Ga0207648_10007997 Ga0207648_100079972 558
157 3300026118 Ga0207675_100006393 Ga0207675_1000063935 558
158 3300026118 Ga0207675_100121749 Ga0207675_1001217491 558
159 3300026121 Ga0207683_10042431 Ga0207683_100424312 558
160 3300005337 Ga0070682_100001497 Ga0070682_1000014975 559
161 3300005406 Ga0070703_10000915 Ga0070703_100009154 559
162 3300005440 Ga0070705_100012085 Ga0070705_1000120852 559
163 3300005444 Ga0070694_100005098 Ga0070694_1000050985 559
164 3300005444 Ga0070694_100019206 Ga0070694_1000192062 559
165 3300005471 Ga0070698_100028265 Ga0070698_1000282652 559
166 3300005547 Ga0070693_100043414 Ga0070693_1000434142 559
167 3300005615 Ga0070702_100075857 Ga0070702_1000758571 559
168 3300005617 Ga0068859_100194268 Ga0068859_1001942681 559
169 3300005834 Ga0068851_10003226 Ga0068851_100032263 559
170 3300005841 Ga0068863_100016031 Ga0068863_1000160314 559
171 3300006931 Ga0097620_100194274 Ga0097620_1001942741 559
172 3300009093 Ga0105240_10032254 Ga0105240_100322542 559
173 3300009147 Ga0114129_10046060 Ga0114129_100460604 559
174 3300009148 Ga0105243_10043920 Ga0105243_100439201 559
175 3300009545 Ga0105237_10000662 Ga0105237_100006626 559
176 3300013306 Ga0163162_10044173 Ga0163162_100441732 559
177 3300013307 Ga0157372_10008942 Ga0157372_100089422 559
178 3300025321 Ga0207656_10000427 Ga0207656_1000042711 559
179 3300025885 Ga0207653_10000878 Ga0207653_100008782 559
180 3300025908 Ga0207643_10002989 Ga0207643_100029894 559
181 3300025913 Ga0207695_10108633 Ga0207695_101086332 559
182 3300025914 Ga0207671_10006471 Ga0207671_100064715 559
183 3300025936 Ga0207670_10000275 Ga0207670_1000027513 559
184 3300025981 Ga0207640_10121375 Ga0207640_101213751 559
185 3300026116 Ga0207674_10062880 Ga0207674_100628802 559
186 3300028380 Ga0268265_10079000 Ga0268265_100790002 559
187 3300032005 Ga0307411_10042686 Ga0307411_100426862 559
188 3300035090 Ga0373949_0003249 Ga0373949_0003249_726_2405 559
189 3300048915 Ga0496112_0093390 Ga0496112_0093390_54_1733 559
190 3300050507 nmdc:mga05p37_64124_c1 nmdc:mga05p37_64124_c1_2418_4097 559
191 3300050515 nmdc:mga0a205_15345_c1 nmdc:mga0a205_15345_c1_5118_6848 559
192 3300005288 Ga0065714_10064657 Ga0065714_1006465722 560
193 3300005290 Ga0065712_10000176 Ga0065712_1000017622 560
194 3300005293 Ga0065715_10108607 Ga0065715_101086072 560
195 3300005331 Ga0070670_100063854 Ga0070670_1000638542 560
196 3300005333 Ga0070677_10019863 Ga0070677_100198631 560
197 3300005353 Ga0070669_100001235 Ga0070669_1000012353 560
198 3300005353 Ga0070669_100010969 Ga0070669_1000109692 560
199 3300005364 Ga0070673_100096853 Ga0070673_1000968531 560
200 3300005440 Ga0070705_100034835 Ga0070705_1000348352 560
201 3300005441 Ga0070700_100000055 Ga0070700_10000005527 560
202 3300005441 Ga0070700_100044688 Ga0070700_1000446882 560
203 3300005444 Ga0070694_100014769 Ga0070694_1000147693 560
204 3300005445 Ga0070708_100103172 Ga0070708_1001031721 560
205 3300005457 Ga0070662_100066687 Ga0070662_1000666872 560
206 3300005467 Ga0070706_100000138 Ga0070706_10000013846 560
207 3300005518 Ga0070699_100002884 Ga0070699_1000028846 560
208 3300005546 Ga0070696_100015576 Ga0070696_1000155764 560
209 3300005578 Ga0068854_100054649 Ga0068854_1000546492 560
210 3300005617 Ga0068859_100104301 Ga0068859_1001043012 560
211 3300005618 Ga0068864_100033058 Ga0068864_1000330582 560
212 3300005841 Ga0068863_100021449 Ga0068863_1000214492 560
213 3300005844 Ga0068862_100006009 Ga0068862_1000060096 560
214 3300005844 Ga0068862_100087181 Ga0068862_1000871812 560
215 3300006852 Ga0075433_10019239 Ga0075433_100192395 560
216 3300006880 Ga0075429_100018120 Ga0075429_1000181203 560
217 3300006931 Ga0097620_100104306 Ga0097620_1001043062 560
218 3300007076 Ga0075435_100001548 Ga0075435_1000015486 560
219 3300009094 Ga0111539_10006832 Ga0111539_100068328 560
220 3300009147 Ga0114129_10075479 Ga0114129_100754793 560
221 3300009147 Ga0114129_10222849 Ga0114129_102228492 560
222 3300009177 Ga0105248_10036222 Ga0105248_100362223 560
223 3300014325 Ga0163163_10014159 Ga0163163_100141595 560
224 3300014326 Ga0157380_10015407 Ga0157380_100154072 560
225 3300025910 Ga0207684_10000023 Ga0207684_1000002332 560
226 3300025912 Ga0207707_10008074 Ga0207707_100080743 560
227 3300025912 Ga0207707_10103982 Ga0207707_101039821 560
228 3300025923 Ga0207681_10002302 Ga0207681_100023024 560
229 3300025923 Ga0207681_10030401 Ga0207681_100304012 560
230 3300025925 Ga0207650_10000979 Ga0207650_100009798 560
231 3300025933 Ga0207706_10065636 Ga0207706_100656362 560
232 3300025941 Ga0207711_10002998 Ga0207711_100029982 560
233 3300025961 Ga0207712_10009473 Ga0207712_100094735 560
234 3300025981 Ga0207640_10011387 Ga0207640_100113872 560
235 3300026075 Ga0207708_10000026 Ga0207708_1000002644 560
236 3300026075 Ga0207708_10067440 Ga0207708_100674402 560
237 3300026088 Ga0207641_10012182 Ga0207641_100121825 560
238 3300026095 Ga0207676_10001186 Ga0207676_100011866 560
239 3300026118 Ga0207675_100058558 Ga0207675_1000585581 560
240 3300026118 Ga0207675_100064560 Ga0207675_1000645602 560
241 3300031548 Ga0307408_100077540 Ga0307408_1000775402 560
242 3300035091 Ga0373951_0002098 Ga0373951_0002098_1312_2994 560
243 3300042157 Ga0439458_0000541 Ga0439458_0000541_77_1762 560
244 3300049574 Ga0501038_0000710 Ga0501038_0000710_23662_25353 560
245 3300049669 Ga0501235_010049 Ga0501235_010049_52_1737 560
246 3300050511 nmdc:mga08y16_3238_c1 nmdc:mga08y16_3238_c1_5264_6955 560
247 3300050512 nmdc:mga0n895_51946_c1 nmdc:mga0n895_51946_c1_1093_2826 560
248 3300050515 nmdc:mga0a205_48507_c1 nmdc:mga0a205_48507_c1_811_2496 560
249 3300002459 JGI24751J29686_10000060 JGI24751J29686_1000006047 561
250 3300005331 Ga0070670_100000932 Ga0070670_1000009323 561
251 3300005471 Ga0070698_100036112 Ga0070698_1000361122 561
252 3300005530 Ga0070679_100164146 Ga0070679_1001641462 561
253 3300005577 Ga0068857_100022006 Ga0068857_1000220062 561
254 3300009551 Ga0105238_10005026 Ga0105238_100050268 561
255 3300014325 Ga0163163_10002597 Ga0163163_100025976 561
256 3300025925 Ga0207650_10000001 Ga0207650_10000001399 561
257 3300025935 Ga0207709_10001778 Ga0207709_100017781 561
258 3300025935 Ga0207709_10023912 Ga0207709_100239122 561
259 3300025942 Ga0207689_10065711 Ga0207689_100657112 561
260 3300026035 Ga0207703_10045146 Ga0207703_100451463 561
261 3300026075 Ga0207708_10016563 Ga0207708_100165635 561
262 3300026095 Ga0207676_10083306 Ga0207676_100833062 561
263 3300026118 Ga0207675_100073238 Ga0207675_1000732382 561

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13519

VWA_2

von Willebrand factor type A domain

406

506

0.92

PF00092

VWA

von Willebrand factor type A domain

405

533

0.89

PF05762

VWA_CoxE

VWA domain containing CoxE-like protein

389

537

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mpe-assembly2.cif.gz_W 26s proteasome in presence of atp (s2) 0.8118 325 456
5ln1-assembly1.cif.gz_A-2 structure of ubiquitylated-rpn10 from yeast; 0.7871 324 451
1pt6-assembly1.cif.gz_A i domain from human integrin alpha1-beta1 0.7846 325 520
6pyx-assembly2.cif.gz_B calcium activated chloride channel regulator 1 (clca1) vwa domain 0.7808 323 500
5vnm-assembly1.cif.gz_A crystal structure of sec23a/sec24a/sec22 complexed with 4-phenylbutyric acid (15mm soaking) 0.7806 321 456
ID Description Score Start End Superfamily
af_Q13349_134_288_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8563 323 454 3.40.50.410
af_I1JH43_261_411_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8454 327 429 3.40.50.410
af_A0A0R4IGD8_95_248_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8442 319 454 3.40.50.410
af_A0A0P0WT04_289_392_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8233 327 413 3.40.50.410
af_Q5NJJ5_31_218_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8215 322 451 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A7V9IEJ4-F1-model_v4 Uncharacterized protein 0.8766 21 170
AF-A0A3M1SMJ6-F1-model_v4 VWA domain-containing protein 0.8724 21 559
AF-A0A6L6AUR5-F1-model_v4 VWA domain-containing protein 0.8723 319 518 GO:0005886
AF-A0A3N5EV26-F1-model_v4 VWA domain-containing protein 0.8597 318 536
AF-A0A2V9HBJ1-F1-model_v4 VWA domain-containing protein 0.8567 326 520

Feature Viewer

pLDDT pTM Quality
76.27 0.61 Medium
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Predicted Structure (AlphaFold2)

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