F367165

General Info

Members Datasets Scaffolds Average Seq Length
257 200 241 323

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100057584|Ga0068859_1000575844
Length 360
Sequence MARRPTAAQRYRVSQEKRRQLPRMGAAFSMLVHSPDVRQRNDSPNAPSPTDDMVWVPGATFRMGSDSHYPEEGPAHRVAVDGFWIDRHPVTNERFARFVAETGHVTFAEIPPNVADYPHAIPELLHPGSLVFRKPPGRVDLRHIGSWWEFCLGADWRHPGGPGTTLEQLASHPVVHVAYGDAIAFATWEGKSLPTEAEWEFAARGGLDGAKFAWGDQLMPNGRPMANFWQGEFPHENTLIDGWEGTSPVGTYSANGYGIHDMIGNVWEWTDDWYMPRHDAGDTRKACCIPRNPRGGAMGESFDPRHPDMKIPRKVLKGGSHLCSENYCMRYRPAARFPEPIDTSTSHVGFRCIIRPAPAA

Samples

Sample ID Description Type Environment
1 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
2 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
3 2643221734 Bosea sp. Root670 Isolate Unclassified
4 2643221736 Bosea sp. Root483D1 Isolate Unclassified
5 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
6 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
7 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
8 2851182111 Bosea sp. Tri-44 Isolate Nodule
9 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
10 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
11 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
12 2941479691
13 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
14 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
20 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
21 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
24 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
25 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
29 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
30 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
31 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
32 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
33 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
34 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
35 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
36 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
37 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
38 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
39 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
40 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
41 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
42 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
43 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
46 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
47 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
48 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
55 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
81 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
82 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
126 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
127 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
128 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
132 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
133 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
134 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
135 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
136 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
141 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
142 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
143 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
144 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
145 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
146 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
147 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
148 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
149 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
150 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
156 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
157 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
158 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
159 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
160 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
161 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
162 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
163 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
175 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
179 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
180 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
181 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
185 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
186 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
187 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
188 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
189 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
194 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
195 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
196 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
197 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
198 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
199 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
200 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.61
Metatranscriptomes 1.17
Isolates 6.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.56
Nodule 3.11
Rhizoplane 2.33
Rhizosphere 72.37
Stem 0
Stem Tuber 0
Unclassified 6.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000096 3300002987 Bacteria 41782
2 JGI25159J45721_1000150 3300002987 Bacteria 32467
3 JGI25406J46586_10026587 3300003203 Bacteria 2229
4 JGI25153J46596_10000249 3300003215 Bacteria 44163
5 JGI25153J46596_10001599 3300003215 Bacteria 13428
6 JGI25160J50197_1000070 3300003354 Bacteria 110748
7 JGI25161J50226_1000026 3300003374 Bacteria 146134
8 Ga0055526_1000399 3300003771 Bacteria 35090
9 Ga0055524_1003933 3300003775 Bacteria 7034
10 Ga0055528_1011785 3300003790 Bacteria 3442
11 Ga0055540_1000581 3300003792 Bacteria 26766
12 Ga0055543_1000042 3300004625 Bacteria 117438
13 Ga0058863_11504797 3300004799 Bacteria 2642
14 Ga0058861_11553195 3300004800 Bacteria 1925
15 Ga0058862_12878892 3300004803 Bacteria 6275
16 Ga0065165_1000512 3300005262 Bacteria 59678
17 Ga0070658_10003661 3300005327 Bacteria 12586
18 Ga0070683_100014280 3300005329 Bacteria 6943
19 Ga0070683_100020797 3300005329 Bacteria 5847
20 Ga0070683_100178619 3300005329 Bacteria 2015
21 Ga0070683_100196253 3300005329 Bacteria 1917
22 Ga0070690_100045867 3300005330 Bacteria 2778
23 Ga0070670_100034883 3300005331 Bacteria 4330
24 Ga0068869_100046981 3300005334 Bacteria 3116
25 Ga0068869_100128727 3300005334 Bacteria 1944
26 Ga0070666_10190764 3300005335 Bacteria 1440
27 Ga0070680_100011039 3300005336 Bacteria 6981
28 Ga0070660_100052264 3300005339 Bacteria 3150
29 Ga0070689_100137197 3300005340 Bacteria 1965
30 Ga0070687_100019178 3300005343 Bacteria 3178
31 Ga0070661_100272746 3300005344 Bacteria 1310
32 Ga0070668_100151904 3300005347 Bacteria 1873
33 Ga0070675_100005086 3300005354 Bacteria 10036
34 Ga0070675_100024825 3300005354 Bacteria 4801
35 Ga0070674_100052990 3300005356 Bacteria 2800
36 Ga0070673_100274448 3300005364 Bacteria 1477
37 Ga0070688_100089625 3300005365 Bacteria 2007
38 Ga0070659_100084666 3300005366 Bacteria 2535
39 Ga0070667_100001643 3300005367 Bacteria 19988
40 Ga0070667_100043429 3300005367 Bacteria 3772
41 Ga0070667_100078017 3300005367 Bacteria 2829
42 Ga0070667_100078309 3300005367 Bacteria 2824
43 Ga0070662_100175725 3300005457 Bacteria 1685
44 Ga0070681_10004885 3300005458 Bacteria 12858
45 Ga0068867_100050119 3300005459 Bacteria 3076
46 Ga0068867_100262310 3300005459 Bacteria 1409
47 Ga0070679_100001163 3300005530 Bacteria 23048
48 Ga0070679_100083665 3300005530 Bacteria 3179
49 Ga0070684_100000814 3300005535 Bacteria 21770
50 Ga0070684_100106612 3300005535 Bacteria 2509
51 Ga0070684_100252856 3300005535 Bacteria 1611
52 Ga0070672_100018213 3300005543 Bacteria 5072
53 Ga0070665_100001353 3300005548 Bacteria 29032
54 Ga0070665_100051983 3300005548 Bacteria 4110
55 Ga0070665_100131034 3300005548 Bacteria 2510
56 Ga0070664_100020012 3300005564 Bacteria 5509
57 Ga0070664_100045143 3300005564 Bacteria 3722
58 Ga0070664_100194719 3300005564 Bacteria 1807
59 Ga0068857_100006825 3300005577 Bacteria 9826
60 Ga0068857_100147841 3300005577 Bacteria 2127
61 Ga0068854_100176965 3300005578 Bacteria 1664
62 Ga0070702_100182639 3300005615 Bacteria 1374
63 Ga0068859_100057584 3300005617 Bacteria 3914
64 Ga0068859_100128957 3300005617 Bacteria 2600
65 Ga0068870_10094700 3300005840 Bacteria 1676
66 Ga0068860_100118257 3300005843 Bacteria 2537
67 Ga0068860_100165054 3300005843 Bacteria 2137
68 Ga0081539_10003223 3300005985 Bacteria 20591
69 Ga0075369_10059538 3300006186 Bacteria 1664
70 Ga0075428_100115100 3300006844 Bacteria 2929
71 Ga0075430_100008239 3300006846 Bacteria 8802
72 Ga0075431_100003652 3300006847 Bacteria 14922
73 Ga0075431_100017756 3300006847 Bacteria 7234
74 Ga0075429_100009896 3300006880 Bacteria 8267
75 Ga0068865_100060789 3300006881 Bacteria 2646
76 Ga0097620_100057588 3300006931 Bacteria 3914
77 Ga0097620_100128959 3300006931 Bacteria 2600
78 Ga0111539_10005081 3300009094 Bacteria 17086
79 Ga0111539_10049736 3300009094 Bacteria 4998
80 Ga0114129_10000054 3300009147 Bacteria 99951
81 Ga0114129_10095396 3300009147 Bacteria 4120
82 Ga0114129_10780526 3300009147 Bacteria 1221
83 Ga0105243_10017124 3300009148 Bacteria 5481
84 Ga0105243_10104369 3300009148 Bacteria 2359
85 Ga0105242_10018590 3300009176 Bacteria 5436
86 Ga0105242_10205341 3300009176 Bacteria 1752
87 Ga0105248_10037370 3300009177 Bacteria 5433
88 Ga0105248_10114075 3300009177 Bacteria 3048
89 Ga0105248_10219179 3300009177 Bacteria 2142
90 Ga0105249_10143237 3300009553 Bacteria 2294
91 Ga0105249_10552602 3300009553 Bacteria 1202
92 Ga0157371_10101197 3300013102 Bacteria 2044
93 Ga0157369_10362442 3300013105 Bacteria 1505
94 Ga0171462_1013 3300013250 Bacteria 202864
95 Ga0163162_10063243 3300013306 Bacteria 3742
96 Ga0157372_10035589 3300013307 Bacteria 5482
97 Ga0157375_10009966 3300013308 Bacteria 8355
98 Ga0157375_10035172 3300013308 Bacteria 4780
99 Ga0163163_10089770 3300014325 Bacteria 3086
100 Ga0207425_1000558 3300025245 Bacteria 22120
101 Ga0207425_1002224 3300025245 Bacteria 7036
102 Ga0209129_1000092 3300025258 Bacteria 173874
103 Ga0209673_1000987 3300025273 Bacteria 34806
104 Ga0209130_1000073 3300025284 Bacteria 174439
105 Ga0209025_1019429 3300025294 Bacteria 3780
106 Ga0209564_1000168 3300025295 Bacteria 158368
107 Ga0209758_1000201 3300025297 Bacteria 132855
108 Ga0209256_1000102 3300025299 Bacteria 199097
109 Ga0209256_1002173 3300025299 Bacteria 16844
110 Ga0207426_1000140 3300025302 Bacteria 195664
111 Ga0209051_1001138 3300025303 Bacteria 24291
112 Ga0209257_1011055 3300025304 Bacteria 4425
113 Ga0207642_10085191 3300025899 Bacteria 1546
114 Ga0207680_10219068 3300025903 Bacteria 1304
115 Ga0207645_10163079 3300025907 Bacteria 1459
116 Ga0207643_10021652 3300025908 Bacteria 3535
117 Ga0207705_10009222 3300025909 Bacteria 7184
118 Ga0207707_10004525 3300025912 Bacteria 12225
119 Ga0207660_10011643 3300025917 Bacteria 5735
120 Ga0207662_10057172 3300025918 Bacteria 2331
121 Ga0207657_10062476 3300025919 Bacteria 3188
122 Ga0207649_10028008 3300025920 Bacteria 3314
123 Ga0207652_10005811 3300025921 Bacteria 10004
124 Ga0207681_10011611 3300025923 Bacteria 5414
125 Ga0207659_10047291 3300025926 Bacteria 3043
126 Ga0207659_10088822 3300025926 Bacteria 2303
127 Ga0207644_10055012 3300025931 Bacteria 2868
128 Ga0207706_10179564 3300025933 Bacteria 1859
129 Ga0207669_10007172 3300025937 Bacteria 5133
130 Ga0207669_10105910 3300025937 Bacteria 1872
131 Ga0207704_10006347 3300025938 Bacteria 5508
132 Ga0207691_10030857 3300025940 Bacteria 5006
133 Ga0207691_10076045 3300025940 Bacteria 3026
134 Ga0207689_10066957 3300025942 Bacteria 2952
135 Ga0207689_10153024 3300025942 Bacteria 1901
136 Ga0207661_10018245 3300025944 Bacteria 5211
137 Ga0207661_10049642 3300025944 Bacteria 3340
138 Ga0207679_10041774 3300025945 Bacteria 3291
139 Ga0207679_10104173 3300025945 Bacteria 2225
140 Ga0207712_10157797 3300025961 Bacteria 1759
141 Ga0207712_10314715 3300025961 Bacteria 1289
142 Ga0207668_10000003 3300025972 Bacteria 206959
143 Ga0207640_10187319 3300025981 Bacteria 1557
144 Ga0207658_10004355 3300025986 Bacteria 9847
145 Ga0207658_10076127 3300025986 Bacteria 2556
146 Ga0207708_10177745 3300026075 Bacteria 1689
147 Ga0207648_10074128 3300026089 Bacteria 2966
148 Ga0207648_10303097 3300026089 Bacteria 1433
149 Ga0207676_10027748 3300026095 Bacteria 4221
150 Ga0207674_10004876 3300026116 Bacteria 16058
151 Ga0207674_10184343 3300026116 Bacteria 2038
152 Ga0207675_100285389 3300026118 Bacteria 1605
153 Ga0268266_10000221 3300028379 Bacteria 99332
154 Ga0268266_10176851 3300028379 Bacteria 1941
155 Ga0268265_10041810 3300028380 Bacteria 3396
156 Ga0268264_10351309 3300028381 Bacteria 1403
157 Ga0307406_10208457 3300031901 Bacteria 1444
158 Ga0307409_100113910 3300031995 Bacteria 2274
159 Ga0373954_0021039 3300035118 Bacteria 2953
160 Ga0373955_0025590 3300035172 Bacteria 3033
161 Ga0373961_0044248 3300035241 Bacteria 1298
162 Ga0373937_0455673 3300036401 Bacteria 1215
163 Ga0436365_1367441 3300039437 Bacteria 8113
164 Ga0451835_0154583 3300041492 Bacteria 9541
165 Ga0451839_1329932 3300041496 Bacteria 1719
166 Ga0451851_0111376 3300041507 Bacteria 8204
167 Ga0451853_1409747 3300041512 Bacteria 4076
168 Ga0439454_010505 3300042011 Bacteria 1221
169 Ga0439458_0013960 3300042157 Bacteria 1811
170 Ga0466957_0076536 3300044842 Bacteria 2078
171 Ga0495629_0055008 3300046459 Bacteria 2783
172 Ga0495638_0002804 3300046460 Bacteria 13963
173 Ga0495638_0007956 3300046460 Bacteria 7562
174 Ga0495605_0016610 3300046474 Bacteria 3982
175 Ga0495662_0041423 3300046476 Bacteria 2223
176 Ga0495585_0020331 3300046492 Bacteria 3819
177 Ga0495607_0050062 3300046501 Bacteria 2434
178 Ga0495632_0005220 3300046519 Bacteria 8657
179 Ga0495643_0095013 3300046522 Bacteria 1534
180 Ga0495640_0174584 3300046533 Bacteria 1372
181 Ga0495609_0076941 3300046538 Bacteria 1462
182 Ga0495622_0114055 3300046557 Bacteria 1236
183 Ga0495633_0063349 3300046558 Bacteria 1730
184 Ga0495656_0120896 3300046615 Bacteria 1236
185 Ga0495668_0009665 3300046616 Bacteria 5898
186 Ga0495611_0101884 3300046648 Bacteria 1334
187 Ga0495625_0011521 3300046660 Bacteria 7203
188 Ga0495635_0078307 3300046663 Bacteria 2263
189 Ga0495659_0091552 3300046664 Bacteria 1168
190 Ga0495657_0058596 3300046675 Bacteria 2557
191 Ga0495657_0059812 3300046675 Bacteria 2526
192 Ga0495623_0054096 3300046679 Bacteria 2533
193 Ga0495670_0035822 3300046691 Bacteria 2472
194 Ga0495589_0047020 3300046794 Bacteria 2139
195 Ga0495660_0007229 3300046810 Bacteria 6536
196 Ga0495604_0021272 3300047317 Bacteria 5178
197 Ga0495681_0066248 3300047470 Bacteria 1649
198 Ga0495602_0122577 3300048088 Bacteria 2089
199 Ga0496106_0000746 3300048909 Bacteria 23470
200 Ga0496109_0068187 3300048912 Bacteria 3261
201 Ga0496109_0116186 3300048912 Bacteria 2490
202 Ga0496110_0125359 3300048913 Bacteria 2317
203 Ga0496112_0008292 3300048915 Bacteria 9298
204 Ga0496112_0064769 3300048915 Bacteria 3607
205 Ga0496116_0122969 3300048919 Bacteria 1497
206 Ga0496118_0019669 3300048921 Bacteria 6026
207 Ga0496122_0033892 3300048925 Bacteria 4191
208 Ga0496122_0045552 3300048925 Bacteria 3408
209 Ga0496123_0006170 3300048926 Bacteria 11723
210 Ga0496124_0010326 3300048927 Bacteria 9472
211 Ga0496124_0099432 3300048927 Bacteria 2359
212 Ga0496125_0007147 3300048928 Bacteria 11918
213 Ga0495678_054200 3300049459 Bacteria 1536
214 Ga0501039_0090966 3300049575 Bacteria 2378
215 Ga0501040_0069924 3300049576 Bacteria 2422
216 Ga0501041_0147490 3300049577 Bacteria 1468
217 Ga0501075_0081349 3300049591 Bacteria 2452
218 Ga0501076_0023876 3300049592 Bacteria 4718
219 Ga0501077_0015174 3300049593 Bacteria 4845
220 Ga0501081_0044221 3300049743 Bacteria 3057
221 nmdc:mga05p37_11_c1 3300050507 Bacteria 149577
222 nmdc:mga05p37_516085_c1 3300050507 Bacteria 1368
223 nmdc:mga08y16_23722_c1 3300050511 Bacteria 6477
224 Ga0495601_0080579 3300053077 Bacteria 2089
225 Ga0500610_0026686 3300053079 Bacteria 2893
226 Ga0500643_007699 3300053087 Bacteria 4309
227 Ga0500643_014062 3300053087 Bacteria 2798
228 Ga0500644_0002300 3300053088 Bacteria 4813
229 Ga0500557_001410 3300053105 Bacteria 3897
230 Ga0500658_0000363 3300053134 Bacteria 20007
231 Ga0500658_0007699 3300053134 Bacteria 3977
232 Ga0500568_0000738 3300053139 Bacteria 23375
233 Ga0500590_000378 3300053148 Bacteria 14791
234 Ga0500590_001751 3300053148 Bacteria 9140
235 Ga0500616_0003400 3300053153 Bacteria 12210
236 Ga0500622_0000116 3300053156 Bacteria 82811
237 Ga0500622_0000533 3300053156 Bacteria 35317
238 Ga0500636_0061428 3300053177 Bacteria 2193
239 Ga0501084_0024501 3300054114 Bacteria 5035
240 Ga0501084_0427015 3300054114 Bacteria 1120
241 Ga0530510_0011611 3300061734 Bacteria 6181

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009094 Ga0111539_10049736 Ga0111539_100497364 276
2 3300009147 Ga0114129_10000054 Ga0114129_1000005453 289
3 3300031995 Ga0307409_100113910 Ga0307409_1001139102 289
4 3300050507 nmdc:mga05p37_11_c1 nmdc:mga05p37_11_c1_142662_143684 289
5 3300042011 Ga0439454_010505 Ga0439454_010505_330_1205 290
6 3300046675 Ga0495657_0059812 Ga0495657_0059812_1034_1918 293
7 3300046679 Ga0495623_0054096 Ga0495623_0054096_1054_1938 293
8 3300036401 Ga0373937_0455673 Ga0373937_0455673_177_1130 296
9 3300009177 Ga0105248_10114075 Ga0105248_101140754 299
10 iso_pu_bacteria 2841911363 2841916633 299
11 iso_pu_bacteria 2841917233 2841922530 299
12 3300005347 Ga0070668_100151904 Ga0070668_1001519042 300
13 3300005367 Ga0070667_100001643 Ga0070667_1000016438 300
14 3300005548 Ga0070665_100001353 Ga0070665_10000135313 300
15 3300005615 Ga0070702_100182639 Ga0070702_1001826392 300
16 3300009177 Ga0105248_10219179 Ga0105248_102191793 300
17 3300025961 Ga0207712_10314715 Ga0207712_103147152 300
18 3300025972 Ga0207668_10000003 Ga0207668_1000000322 300
19 3300025986 Ga0207658_10004355 Ga0207658_100043558 300
20 3300028379 Ga0268266_10000221 Ga0268266_1000022132 300
21 3300028380 Ga0268265_10041810 Ga0268265_100418102 300
22 3300009147 Ga0114129_10780526 Ga0114129_107805262 303
23 3300009148 Ga0105243_10104369 Ga0105243_101043693 303
24 3300009176 Ga0105242_10018590 Ga0105242_100185904 303
25 3300009177 Ga0105248_10037370 Ga0105248_100373703 303
26 3300013102 Ga0157371_10101197 Ga0157371_101011973 303
27 3300013306 Ga0163162_10063243 Ga0163162_100632434 303
28 3300013307 Ga0157372_10035589 Ga0157372_100355895 303
29 3300013308 Ga0157375_10009966 Ga0157375_100099665 303
30 3300014325 Ga0163163_10089770 Ga0163163_100897702 303
31 3300048913 Ga0496110_0125359 Ga0496110_0125359_469_1383 303
32 3300048915 Ga0496112_0064769 Ga0496112_0064769_890_1804 303
33 3300050507 nmdc:mga05p37_516085_c1 nmdc:mga05p37_516085_c1_162_1109 303
34 3300053087 Ga0500643_014062 Ga0500643_014062_1831_2745 303
35 3300005329 Ga0070683_100178619 Ga0070683_1001786192 304
36 3300005535 Ga0070684_100106612 Ga0070684_1001066123 304
37 3300035241 Ga0373961_0044248 Ga0373961_0044248_240_1160 304
38 3300048912 Ga0496109_0068187 Ga0496109_0068187_1331_2251 304
39 3300048915 Ga0496112_0008292 Ga0496112_0008292_6594_7514 304
40 3300009148 Ga0105243_10017124 Ga0105243_100171244 305
41 3300009553 Ga0105249_10552602 Ga0105249_105526021 305
42 3300013308 Ga0157375_10035172 Ga0157375_100351725 305
43 3300025908 Ga0207643_10021652 Ga0207643_100216523 305
44 3300053087 Ga0500643_007699 Ga0500643_007699_1512_2432 305
45 3300026089 Ga0207648_10303097 Ga0207648_103030971 306
46 3300042157 Ga0439458_0013960 Ga0439458_0013960_241_1170 307
47 3300026089 Ga0207648_10074128 Ga0207648_100741282 308
48 3300039437 Ga0436365_1367441 Ga0436365_1367441_3337_4302 308
49 iso_pu_bacteria 2643221736 2644744068 308
50 3300025294 Ga0209025_1019429 Ga0209025_10194292 309
51 3300049743 Ga0501081_0044221 Ga0501081_0044221_647_1627 309
52 iso_pu_bacteria 2851182111 2851184682 309
53 3300013250 Ga0171462_1013 Ga0171462_1013196 310
54 3300048925 Ga0496122_0045552 Ga0496122_0045552_2180_3139 310
55 iso_pu_bacteria 2917699015 2917702830 310
56 3300006844 Ga0075428_100115100 Ga0075428_1001151002 311
57 3300006846 Ga0075430_100008239 Ga0075430_1000082393 311
58 3300006847 Ga0075431_100017756 Ga0075431_1000177566 311
59 3300009147 Ga0114129_10095396 Ga0114129_100953963 311
60 3300035118 Ga0373954_0021039 Ga0373954_0021039_1374_2327 311
61 3300035172 Ga0373955_0025590 Ga0373955_0025590_664_1617 311
62 iso_pu_bacteria 2643221734 2644735622 311
63 3300025299 Ga0209256_1000102 Ga0209256_1000102167 312
64 3300026118 Ga0207675_100285389 Ga0207675_1002853891 312
65 3300031901 Ga0307406_10208457 Ga0307406_102084572 312
66 3300005334 Ga0068869_100046981 Ga0068869_1000469812 313
67 3300005548 Ga0070665_100131034 Ga0070665_1001310344 313
68 3300006186 Ga0075369_10059538 Ga0075369_100595381 313
69 3300025907 Ga0207645_10163079 Ga0207645_101630791 313
70 3300025937 Ga0207669_10105910 Ga0207669_101059101 313
71 3300025942 Ga0207689_10066957 Ga0207689_100669571 313
72 3300028379 Ga0268266_10176851 Ga0268266_101768511 313
73 3300046460 Ga0495638_0002804 Ga0495638_0002804_9188_10141 313
74 3300046474 Ga0495605_0016610 Ga0495605_0016610_235_1188 313
75 3300046519 Ga0495632_0005220 Ga0495632_0005220_7499_8452 313
76 3300046616 Ga0495668_0009665 Ga0495668_0009665_88_1041 313
77 3300046660 Ga0495625_0011521 Ga0495625_0011521_5709_6662 313
78 3300046810 Ga0495660_0007229 Ga0495660_0007229_448_1401 313
79 3300049459 Ga0495678_054200 Ga0495678_054200_414_1367 313
80 3300053079 Ga0500610_0026686 Ga0500610_0026686_147_1100 313
81 3300053105 Ga0500557_001410 Ga0500557_001410_2453_3406 313
82 3300053134 Ga0500658_0000363 Ga0500658_0000363_12421_13374 313
83 3300053139 Ga0500568_0000738 Ga0500568_0000738_14105_15058 313
84 3300053153 Ga0500616_0003400 Ga0500616_0003400_4559_5512 313
85 3300005530 Ga0070679_100083665 Ga0070679_1000836654 314
86 3300044842 Ga0466957_0076536 Ga0466957_0076536_838_1818 314
87 iso_pu_bacteria 2513237159 2513996952 314
88 iso_pu_bacteria 2582581866 2585397220 314
89 iso_pu_bacteria 2842521101 2842522808 314
90 iso_pu_bacteria 2887478801 2887483105 315
91 3300003215 JGI25153J46596_10001599 JGI25153J46596_100015993 316
92 3300046794 Ga0495589_0047020 Ga0495589_0047020_926_1921 316
93 3300049576 Ga0501040_0069924 Ga0501040_0069924_267_1277 316
94 3300049591 Ga0501075_0081349 Ga0501075_0081349_176_1186 316
95 3300049592 Ga0501076_0023876 Ga0501076_0023876_3176_4186 316
96 3300054114 Ga0501084_0427015 Ga0501084_0427015_58_1068 316
97 3300005327 Ga0070658_10003661 Ga0070658_100036617 317
98 3300005329 Ga0070683_100014280 Ga0070683_1000142804 317
99 3300005329 Ga0070683_100020797 Ga0070683_1000207973 317
100 3300005331 Ga0070670_100034883 Ga0070670_1000348832 317
101 3300005339 Ga0070660_100052264 Ga0070660_1000522642 317
102 3300005344 Ga0070661_100272746 Ga0070661_1002727461 317
103 3300005366 Ga0070659_100084666 Ga0070659_1000846663 317
104 3300005535 Ga0070684_100000814 Ga0070684_1000008146 317
105 3300005535 Ga0070684_100252856 Ga0070684_1002528563 317
106 3300005564 Ga0070664_100020012 Ga0070664_1000200121 317
107 3300005564 Ga0070664_100045143 Ga0070664_1000451432 317
108 3300005577 Ga0068857_100006825 Ga0068857_1000068255 317
109 3300009553 Ga0105249_10143237 Ga0105249_101432372 317
110 3300025909 Ga0207705_10009222 Ga0207705_100092224 317
111 3300025919 Ga0207657_10062476 Ga0207657_100624762 317
112 3300025920 Ga0207649_10028008 Ga0207649_100280081 317
113 3300025944 Ga0207661_10018245 Ga0207661_100182453 317
114 3300025944 Ga0207661_10049642 Ga0207661_100496423 317
115 3300025945 Ga0207679_10104173 Ga0207679_101041732 317
116 3300026095 Ga0207676_10027748 Ga0207676_100277485 317
117 3300026116 Ga0207674_10004876 Ga0207674_100048767 317
118 3300046558 Ga0495633_0063349 Ga0495633_0063349_293_1246 317
119 3300046615 Ga0495656_0120896 Ga0495656_0120896_164_1117 317
120 3300046663 Ga0495635_0078307 Ga0495635_0078307_340_1515 317
121 3300048088 Ga0495602_0122577 Ga0495602_0122577_476_1465 317
122 3300053077 Ga0495601_0080579 Ga0495601_0080579_662_1651 317
123 3300053148 Ga0500590_000378 Ga0500590_000378_1448_2437 317
124 3300053177 Ga0500636_0061428 Ga0500636_0061428_299_1288 317
125 3300005577 Ga0068857_100147841 Ga0068857_1001478412 318
126 3300006847 Ga0075431_100003652 Ga0075431_10000365210 318
127 3300006880 Ga0075429_100009896 Ga0075429_1000098963 318
128 3300013105 Ga0157369_10362442 Ga0157369_103624422 318
129 3300025245 Ga0207425_1002224 Ga0207425_10022243 318
130 3300026116 Ga0207674_10184343 Ga0207674_101843433 318
131 3300046664 Ga0495659_0091552 Ga0495659_0091552_164_1156 318
132 3300048909 Ga0496106_0000746 Ga0496106_0000746_2703_3659 318
133 3300048921 Ga0496118_0019669 Ga0496118_0019669_2302_3258 318
134 3300048925 Ga0496122_0033892 Ga0496122_0033892_569_1525 318
135 3300048926 Ga0496123_0006170 Ga0496123_0006170_2493_3449 318
136 3300048927 Ga0496124_0010326 Ga0496124_0010326_1368_2348 318
137 3300048927 Ga0496124_0099432 Ga0496124_0099432_630_1586 318
138 3300048928 Ga0496125_0007147 Ga0496125_0007147_10128_11084 318
139 3300053156 Ga0500622_0000533 Ga0500622_0000533_2696_3652 318
140 iso_pu_bacteria 2919100787 2919103313 318
141 3300005330 Ga0070690_100045867 Ga0070690_1000458673 319
142 3300005334 Ga0068869_100128727 Ga0068869_1001287272 319
143 3300005335 Ga0070666_10190764 Ga0070666_101907641 319
144 3300005343 Ga0070687_100019178 Ga0070687_1000191784 319
145 3300005354 Ga0070675_100005086 Ga0070675_1000050869 319
146 3300005364 Ga0070673_100274448 Ga0070673_1002744482 319
147 3300005365 Ga0070688_100089625 Ga0070688_1000896252 319
148 3300005367 Ga0070667_100078017 Ga0070667_1000780173 319
149 3300005367 Ga0070667_100078309 Ga0070667_1000783094 319
150 3300005459 Ga0068867_100262310 Ga0068867_1002623101 319
151 3300005617 Ga0068859_100057584 Ga0068859_1000575844 319
152 3300005840 Ga0068870_10094700 Ga0068870_100947001 319
153 3300006881 Ga0068865_100060789 Ga0068865_1000607893 319
154 3300006931 Ga0097620_100057588 Ga0097620_1000575882 319
155 3300009176 Ga0105242_10205341 Ga0105242_102053411 319
156 3300025903 Ga0207680_10219068 Ga0207680_102190682 319
157 3300025918 Ga0207662_10057172 Ga0207662_100571721 319
158 3300025926 Ga0207659_10088822 Ga0207659_100888222 319
159 3300025961 Ga0207712_10157797 Ga0207712_101577971 319
160 3300026075 Ga0207708_10177745 Ga0207708_101777453 319
161 3300041492 Ga0451835_0154583 Ga0451835_0154583_2311_3270 319
162 3300041496 Ga0451839_1329932 Ga0451839_1329932_185_1144 319
163 3300041507 Ga0451851_0111376 Ga0451851_0111376_1785_2744 319
164 3300046459 Ga0495629_0055008 Ga0495629_0055008_110_1078 319
165 3300046460 Ga0495638_0007956 Ga0495638_0007956_2709_3674 319
166 3300046476 Ga0495662_0041423 Ga0495662_0041423_208_1176 319
167 3300046492 Ga0495585_0020331 Ga0495585_0020331_1487_2446 319
168 3300046501 Ga0495607_0050062 Ga0495607_0050062_835_1794 319
169 3300046522 Ga0495643_0095013 Ga0495643_0095013_174_1181 319
170 3300046533 Ga0495640_0174584 Ga0495640_0174584_225_1193 319
171 3300046538 Ga0495609_0076941 Ga0495609_0076941_145_1104 319
172 3300046557 Ga0495622_0114055 Ga0495622_0114055_73_1041 319
173 3300046648 Ga0495611_0101884 Ga0495611_0101884_46_1005 319
174 3300046675 Ga0495657_0058596 Ga0495657_0058596_1067_2035 319
175 3300046691 Ga0495670_0035822 Ga0495670_0035822_868_1827 319
176 3300047317 Ga0495604_0021272 Ga0495604_0021272_3745_4713 319
177 3300047470 Ga0495681_0066248 Ga0495681_0066248_639_1598 319
178 3300053088 Ga0500644_0002300 Ga0500644_0002300_2417_3382 319
179 3300053134 Ga0500658_0007699 Ga0500658_0007699_2976_3935 319
180 3300053148 Ga0500590_001751 Ga0500590_001751_6729_7697 319
181 3300053156 Ga0500622_0000116 Ga0500622_0000116_71277_72242 319
182 iso_pu_bacteria 2941479691 2941481753 319
183 iso_pu_bacteria 8024486573 8024492494 319
184 3300003203 JGI25406J46586_10026587 JGI25406J46586_100265871 320
185 3300005329 Ga0070683_100196253 Ga0070683_1001962532 320
186 3300005356 Ga0070674_100052990 Ga0070674_1000529902 320
187 3300005367 Ga0070667_100043429 Ga0070667_1000434293 320
188 3300005457 Ga0070662_100175725 Ga0070662_1001757252 320
189 3300005459 Ga0068867_100050119 Ga0068867_1000501194 320
190 3300005543 Ga0070672_100018213 Ga0070672_1000182132 320
191 3300005564 Ga0070664_100194719 Ga0070664_1001947193 320
192 3300005578 Ga0068854_100176965 Ga0068854_1001769651 320
193 3300005843 Ga0068860_100165054 Ga0068860_1001650541 320
194 3300005985 Ga0081539_10003223 Ga0081539_1000322318 320
195 3300009094 Ga0111539_10005081 Ga0111539_100050817 320
196 3300025899 Ga0207642_10085191 Ga0207642_100851912 320
197 3300025933 Ga0207706_10179564 Ga0207706_101795642 320
198 3300025937 Ga0207669_10007172 Ga0207669_100071725 320
199 3300025938 Ga0207704_10006347 Ga0207704_100063475 320
200 3300025940 Ga0207691_10030857 Ga0207691_100308575 320
201 3300025945 Ga0207679_10041774 Ga0207679_100417743 320
202 3300025981 Ga0207640_10187319 Ga0207640_101873192 320
203 3300041512 Ga0451853_1409747 Ga0451853_1409747_2750_3715 320
204 3300049575 Ga0501039_0090966 Ga0501039_0090966_1042_2046 320
205 3300049577 Ga0501041_0147490 Ga0501041_0147490_147_1151 320
206 3300049593 Ga0501077_0015174 Ga0501077_0015174_1460_2464 320
207 3300050511 nmdc:mga08y16_23722_c1 nmdc:mga08y16_23722_c1_3395_4384 320
208 3300054114 Ga0501084_0024501 Ga0501084_0024501_187_1191 320
209 3300061734 Ga0530510_0011611 Ga0530510_0011611_4031_5035 320
210 3300004799 Ga0058863_11504797 Ga0058863_115047973 321
211 3300004800 Ga0058861_11553195 Ga0058861_115531953 321
212 3300004803 Ga0058862_12878892 Ga0058862_128788927 321
213 3300005336 Ga0070680_100011039 Ga0070680_1000110393 321
214 3300005458 Ga0070681_10004885 Ga0070681_100048856 321
215 3300005530 Ga0070679_100001163 Ga0070679_10000116320 321
216 3300005843 Ga0068860_100118257 Ga0068860_1001182571 321
217 3300025912 Ga0207707_10004525 Ga0207707_100045253 321
218 3300025917 Ga0207660_10011643 Ga0207660_100116434 321
219 3300025921 Ga0207652_10005811 Ga0207652_100058114 321
220 3300025931 Ga0207644_10055012 Ga0207644_100550121 321
221 3300025940 Ga0207691_10076045 Ga0207691_100760451 321
222 3300025986 Ga0207658_10076127 Ga0207658_100761272 321
223 3300028381 Ga0268264_10351309 Ga0268264_103513091 321
224 iso_pu_bacteria 8045864390 8045869125 321
225 3300002987 JGI25159J45721_1000096 JGI25159J45721_100009620 322
226 3300002987 JGI25159J45721_1000150 JGI25159J45721_10001507 322
227 3300003215 JGI25153J46596_10000249 JGI25153J46596_1000024959 322
228 3300003354 JGI25160J50197_1000070 JGI25160J50197_100007047 322
229 3300003374 JGI25161J50226_1000026 JGI25161J50226_1000026153 322
230 3300003771 Ga0055526_1000399 Ga0055526_10003993 322
231 3300003775 Ga0055524_1003933 Ga0055524_10039334 322
232 3300003790 Ga0055528_1011785 Ga0055528_10117852 322
233 3300003792 Ga0055540_1000581 Ga0055540_10005814 322
234 3300004625 Ga0055543_1000042 Ga0055543_1000042102 322
235 3300005262 Ga0065165_1000512 Ga0065165_100051212 322
236 3300005340 Ga0070689_100137197 Ga0070689_1001371972 322
237 3300005354 Ga0070675_100024825 Ga0070675_1000248255 322
238 3300005548 Ga0070665_100051983 Ga0070665_1000519836 322
239 3300005617 Ga0068859_100128957 Ga0068859_1001289572 322
240 3300006931 Ga0097620_100128959 Ga0097620_1001289592 322
241 3300025245 Ga0207425_1000558 Ga0207425_10005587 322
242 3300025258 Ga0209129_1000092 Ga0209129_1000092117 322
243 3300025273 Ga0209673_1000987 Ga0209673_100098714 322
244 3300025284 Ga0209130_1000073 Ga0209130_1000073103 322
245 3300025295 Ga0209564_1000168 Ga0209564_100016850 322
246 3300025297 Ga0209758_1000201 Ga0209758_100020168 322
247 3300025299 Ga0209256_1002173 Ga0209256_10021733 322
248 3300025302 Ga0207426_1000140 Ga0207426_1000140148 322
249 3300025303 Ga0209051_1001138 Ga0209051_10011383 322
250 3300025304 Ga0209257_1011055 Ga0209257_10110553 322
251 3300025923 Ga0207681_10011611 Ga0207681_100116111 322
252 3300025926 Ga0207659_10047291 Ga0207659_100472913 322
253 3300025942 Ga0207689_10153024 Ga0207689_101530243 322
254 3300048912 Ga0496109_0116186 Ga0496109_0116186_317_1486 322
255 3300048919 Ga0496116_0122969 Ga0496116_0122969_19_987 322
256 iso_pu_bacteria 8005556819 8005558758 322
257 iso_pu_bacteria 8018163183 8018164112 322

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03781

FGE-sulfatase

Sulfatase-modifying factor enzyme 1

49

354

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y1f-assembly1.cif.gz_X human formylglycine generating enzyme with cysteine sulfenic acid 0.916 13 320
2hib-assembly1.cif.gz_X human formylglycine generating enzyme, c336s mutant, iodide co-crystallization 0.9129 15 320
2aii-assembly1.cif.gz_X wild-type formylglycine generating enzyme reacted with iodoacetamide 0.9124 13 320
2afy-assembly1.cif.gz_X formylglycine generating enzyme c341s mutant 0.91 13 320
1y1f-assembly1.cif.gz_X human formylglycine generating enzyme with cysteine sulfenic acid 0.9094 13 320
ID Description Score Start End Superfamily
af_I6Y8I5_2_297_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.9098 17 320 3.90.1580.10
af_I6Y8I5_2_297_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.9008 17 320 3.90.1580.10
af_A0A2R8Q5G7_74_369_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.8569 4 319 3.90.1580.10
af_A0A2R8Q5G7_74_369_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.8456 4 319 3.90.1580.10
af_Q8NBJ7_27_294_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.812 17 319 3.90.1580.10
ID Description Score Start End GO Terms
AF-A0A256FK39-F1-model_v4 Formylglycine-generating sulfatase enzyme family protein 0.9841 19 319 GO:0120147
AF-A0A1G9R1I8-F1-model_v4 Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain 0.9823 17 319 GO:0120147
AF-A0A1W6ZQ04-F1-model_v4 Gliding motility-associated lipoprotein GldK 0.9822 19 319 GO:0120147
AF-A0A7Y8R1M7-F1-model_v4 deleted 0.9821 19 322
AF-I4YN29-F1-model_v4 Sulfatase-modifying factor enzyme domain-containing protein 0.9811 19 319 GO:0120147

Feature Viewer

pLDDT pTM Quality
85.3 0.88 High
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Predicted Structure (AlphaFold2)

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