F365171

General Info

Members Datasets Scaffolds Average Seq Length
254 164 187 302

Family's Representative Sequence

Representative Sequence 3300047321|Ga0495676_0009826|Ga0495676_0009826_2586_3587
Length 333
Sequence MIECMEFNSSIESVMFTSERLKGIDVFVCVADQGSFTAAAERLNLSSSAVSKSIARLENRLGTRLFQRTTRRLALTDAGTAFYRTCTQVLADLEEAELALDIENTEPRGRVRIDLPASYGRLHVLPAILRFVADHPLLLPHISFSDRFVQPVEEGIDIVVRIGGPDAWPAALGHRYLGAQRLIFCASPQYLRVHGEPLVERDLEAHSCVVYGDGNGMANPWYFAGAQPGEMERRVMPARIAVGDGEGQLMAVLAGQGIAQLPTWLASRYLHDASVVEVLPHLATDGLPMNLVWLKSREMLPKVRALLDMLTQCLTPSGASPLATLHALQTRPL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231006 Pseudomonas sp. GM17 Isolate Nodule
3 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
4 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
5 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
6 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
7 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
8 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
9 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
10 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
11 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
12 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
13 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
14 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
15 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
16 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
17 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
18 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
19 2599185257 Pseudomonas sp. NFACC41-3 Isolate Rhizoplane
20 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
21 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
22 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
23 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
24 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
25 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
26 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
27 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
28 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
29 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
30 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
31 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
32 2600254931 Pseudomonas sp. NFIX28 Isolate Rhizoplane
33 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
34 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
35 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
36 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
37 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
38 2671180172 Pseudomonas sp. NFIX51 Isolate Rhizoplane
39 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
40 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
41 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
42 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
43 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
44 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
45 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
46 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
47 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
48 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
49 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
50 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
51 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
52 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
53 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
54 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
55 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
56 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
57 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
58 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
59 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
60 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
61 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
62 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
63 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
64 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
65 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
66 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
67 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
68 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
69 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
84 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
85 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
90 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
91 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
92 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
93 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
94 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
95 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
96 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
97 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
98 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
99 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
100 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
101 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
102 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
103 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
104 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
105 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
109 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
110 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
111 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
112 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
122 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
123 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
124 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
131 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
134 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
135 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
136 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
137 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
152 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
153 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
154 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
155 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
156 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
157 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
158 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
159 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
160 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
161 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere
162 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere
163 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere
164 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.62
Metatranscriptomes 0
Isolates 26.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.72
Nodule 0.79
Rhizoplane 15.35
Rhizosphere 63.78
Stem 0
Stem Tuber 0
Unclassified 15.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_211735 2162886007 Bacteria 4815
2 SwRhRL2b_contig_679659 2162886007 Bacteria 2507
3 JGI25162J39368_1000004 3300002737 Bacteria 441040
4 JGI25163J39215_1000104 3300002771 Bacteria 35186
5 JGI25164J39214_1000026 3300002772 Bacteria 156863
6 JGI25165J46597_1000011 3300003214 Bacteria 441040
7 Ga0065714_10065788 3300005288 Bacteria 8505
8 Ga0065704_10001113 3300005289 Bacteria 12320
9 Ga0065704_10077291 3300005289 Bacteria 4782
10 Ga0070670_100008090 3300005331 Bacteria 8943
11 Ga0105251_10000037 3300009011 Bacteria 117409
12 Ga0105251_10000246 3300009011 Bacteria 54734
13 Ga0105251_10003166 3300009011 Bacteria 12179
14 Ga0105251_10008635 3300009011 Bacteria 6109
15 Ga0105251_10022838 3300009011 Bacteria 3239
16 Ga0105244_10001567 3300009036 Bacteria 18162
17 Ga0105244_10005495 3300009036 Bacteria 8414
18 Ga0105244_10007599 3300009036 Bacteria 6871
19 Ga0105244_10049339 3300009036 Bacteria 2152
20 Ga0105250_10000197 3300009092 Bacteria 51321
21 Ga0105243_10003172 3300009148 Bacteria 13472
22 Ga0105243_10004634 3300009148 Bacteria 10832
23 Ga0105243_10016433 3300009148 Bacteria 5596
24 Ga0105249_10102056 3300009553 Bacteria 2699
25 Ga0157373_10001460 3300013100 Bacteria 18078
26 Ga0157373_10007550 3300013100 Bacteria 8084
27 Ga0157371_10000384 3300013102 Bacteria 55628
28 Ga0157371_10002236 3300013102 Bacteria 18713
29 Ga0157371_10009764 3300013102 Bacteria 7529
30 Ga0157371_10209086 3300013102 Bacteria 1400
31 Ga0157369_10009387 3300013105 Bacteria 11186
32 Ga0157369_10018680 3300013105 Bacteria 7773
33 Ga0157372_10324501 3300013307 Bacteria 1792
34 Ga0157375_10017308 3300013308 Bacteria 6501
35 Ga0182008_10001789 3300014497 Bacteria 14059
36 Ga0182008_10006111 3300014497 Bacteria 6771
37 Ga0182008_10010464 3300014497 Bacteria 4963
38 Ga0182006_1021607 3300015261 Bacteria 2682
39 Ga0182007_10002806 3300015262 Bacteria 8479
40 Ga0163161_10027916 3300017792 Bacteria 4004
41 Ga0163161_10036258 3300017792 Bacteria 3531
42 Ga0163161_10220815 3300017792 Bacteria 1467
43 Ga0209760_100096 3300025207 Bacteria 68022
44 Ga0207427_100003 3300025231 Bacteria 1035004
45 Ga0209437_100002 3300025233 Bacteria 1574801
46 Ga0209233_1000004 3300025261 Bacteria 1574798
47 Ga0207696_1000006 3300025711 Bacteria 616498
48 Ga0207696_1000117 3300025711 Bacteria 148004
49 Ga0207655_1000262 3300025728 Bacteria 83031
50 Ga0207655_1017419 3300025728 Bacteria 3877
51 Ga0207655_1020013 3300025728 Bacteria 3467
52 Ga0207713_1000160 3300025735 Bacteria 100682
53 Ga0207713_1000226 3300025735 Bacteria 76459
54 Ga0207713_1004478 3300025735 Bacteria 9054
55 Ga0207713_1005449 3300025735 Bacteria 7961
56 Ga0207713_1041723 3300025735 Bacteria 1911
57 Ga0207709_10001956 3300025935 Bacteria 13475
58 Ga0207709_10008674 3300025935 Bacteria 5609
59 Ga0209371_1018001 3300027312 Bacteria 1810
60 Ga0268256_1015819 3300030500 Bacteria 2186
61 Ga0439438_000008 3300041405 Bacteria 178072
62 Ga0439438_000746 3300041405 Bacteria 14598
63 Ga0439466_0000722 3300041411 Bacteria 12478
64 Ga0439466_0003058 3300041411 Bacteria 6518
65 Ga0439431_0000047 3300041997 Bacteria 17900
66 Ga0439445_0000397 3300042004 Bacteria 8767
67 Ga0439432_000037 3300042006 Bacteria 41453
68 Ga0439451_001023 3300042009 Bacteria 5428
69 Ga0439452_001915 3300042010 Bacteria 7982
70 Ga0439456_000939 3300042013 Bacteria 5828
71 Ga0439456_001539 3300042013 Bacteria 4648
72 Ga0439463_000368 3300042016 Bacteria 12481
73 Ga0439463_009052 3300042016 Bacteria 2451
74 Ga0439463_011810 3300042016 Bacteria 2144
75 Ga0450900_000862 3300042136 Bacteria 2686
76 Ga0450905_000461 3300042142 Bacteria 4967
77 Ga0450906_001770 3300042145 Bacteria 4730
78 Ga0439446_0001730 3300042156 Bacteria 5069
79 Ga0439440_0001995 3300042993 Bacteria 3797
80 Ga0495591_000054 3300046458 Bacteria 135364
81 Ga0495591_000116 3300046458 Bacteria 92275
82 Ga0495591_019983 3300046458 Bacteria 2226
83 Ga0495653_0002851 3300046463 Bacteria 13814
84 Ga0495650_0000073 3300046471 Bacteria 253286
85 Ga0495650_0002240 3300046471 Bacteria 16176
86 Ga0495605_0000001 3300046474 Bacteria 614538
87 Ga0495605_0000128 3300046474 Bacteria 100439
88 Ga0495605_0004976 3300046474 Bacteria 7764
89 Ga0495584_0023391 3300046491 Bacteria 3133
90 Ga0495585_0001439 3300046492 Bacteria 18676
91 Ga0495596_0020083 3300046500 Bacteria 2736
92 Ga0495607_0000037 3300046501 Bacteria 138869
93 Ga0495607_0000053 3300046501 Bacteria 118035
94 Ga0495607_0000101 3300046501 Bacteria 91495
95 Ga0495607_0000448 3300046501 Bacteria 41496
96 Ga0495607_0000493 3300046501 Bacteria 39452
97 Ga0495607_0014300 3300046501 Bacteria 5173
98 Ga0495583_0000281 3300046506 Bacteria 82123
99 Ga0495583_0000924 3300046506 Bacteria 34532
100 Ga0495583_0002312 3300046506 Bacteria 16608
101 Ga0495606_0000047 3300046507 Bacteria 207892
102 Ga0495606_0000191 3300046507 Bacteria 107427
103 Ga0495606_0006339 3300046507 Bacteria 10943
104 Ga0495606_0010276 3300046507 Bacteria 7794
105 Ga0495610_0003405 3300046512 Bacteria 12410
106 Ga0495610_0017361 3300046512 Bacteria 4106
107 Ga0495610_0088995 3300046512 Bacteria 1402
108 Ga0495616_0070208 3300046513 Bacteria 1696
109 Ga0495620_0000006 3300046515 Bacteria 273098
110 Ga0495620_0000069 3300046515 Bacteria 86730
111 Ga0495620_0009709 3300046515 Bacteria 5108
112 Ga0495632_0000031 3300046519 Bacteria 166613
113 Ga0495632_0000037 3300046519 Bacteria 158699
114 Ga0495637_0000313 3300046520 Bacteria 37785
115 Ga0495637_0016334 3300046520 Bacteria 3471
116 Ga0495637_0036169 3300046520 Bacteria 2152
117 Ga0495643_0000095 3300046522 Bacteria 148901
118 Ga0495643_0000143 3300046522 Bacteria 114897
119 Ga0495643_0002120 3300046522 Bacteria 16364
120 Ga0495648_0000267 3300046524 Bacteria 58885
121 Ga0495648_0002358 3300046524 Bacteria 17539
122 Ga0495648_0132324 3300046524 Unclassified 1324
123 Ga0495654_0000853 3300046530 Bacteria 23109
124 Ga0495654_0022033 3300046530 Bacteria 3313
125 Ga0495654_0063829 3300046530 Bacteria 1762
126 Ga0495609_0000013 3300046538 Bacteria 328540
127 Ga0495609_0001600 3300046538 Bacteria 14800
128 Ga0495622_0023185 3300046557 Bacteria 2893
129 Ga0495668_0013422 3300046616 Bacteria 4832
130 Ga0495611_0001509 3300046648 Bacteria 11486
131 Ga0495611_0001615 3300046648 Bacteria 10973
132 Ga0495625_0000016 3300046660 Bacteria 311353
133 Ga0495625_0085892 3300046660 Bacteria 2183
134 Ga0495661_0000057 3300046665 Bacteria 135044
135 Ga0495671_0001131 3300046692 Bacteria 18367
136 Ga0495649_0000110 3300046694 Bacteria 72175
137 Ga0495649_0029765 3300046694 Bacteria 3017
138 Ga0495660_0010044 3300046810 Bacteria 5505
139 Ga0495660_0010196 3300046810 Bacteria 5465
140 Ga0495660_0063588 3300046810 Bacteria 1975
141 Ga0495676_0000001 3300047321 Bacteria 624167
142 Ga0495676_0009826 3300047321 Bacteria 8692
143 Ga0495680_0012913 3300047322 Bacteria 7318
144 Ga0495679_001223 3300047446 Bacteria 15226
145 Ga0495679_031321 3300047446 Bacteria 1716
146 Ga0495673_0003650 3300047469 Bacteria 10051
147 Ga0495673_0014445 3300047469 Bacteria 4106
148 Ga0495681_0051289 3300047470 Bacteria 1941
149 Ga0495681_0126855 3300047470 Bacteria 1089
150 Ga0495626_0000008 3300048091 Bacteria 271853
151 Ga0496102_0092530 3300048905 Bacteria 2800
152 Ga0496102_0138977 3300048905 Bacteria 2277
153 Ga0496103_0006099 3300048906 Bacteria 7202
154 Ga0496110_0274505 3300048913 Bacteria 1535
155 Ga0496112_0210139 3300048915 Bacteria 1904
156 Ga0496116_0000038 3300048919 Bacteria 370217
157 Ga0496116_0018935 3300048919 Bacteria 5287
158 Ga0496117_0000460 3300048920 Bacteria 68039
159 Ga0496117_0000492 3300048920 Bacteria 65349
160 Ga0496117_0001030 3300048920 Bacteria 42551
161 Ga0496117_0005942 3300048920 Bacteria 12585
162 Ga0496117_0220568 3300048920 Bacteria 1056
163 Ga0496118_0000106 3300048921 Bacteria 155884
164 Ga0496118_0001543 3300048921 Bacteria 34234
165 Ga0496118_0083581 3300048921 Bacteria 2231
166 Ga0496118_0088367 3300048921 Bacteria 2144
167 Ga0496121_0000377 3300048924 Bacteria 91399
168 Ga0496121_0003237 3300048924 Bacteria 23413
169 Ga0496121_0242199 3300048924 Bacteria 1256
170 Ga0496122_0004726 3300048925 Bacteria 16713
171 Ga0496122_0011698 3300048925 Bacteria 8844
172 Ga0496122_0021476 3300048925 Bacteria 5778
173 Ga0496123_0000713 3300048926 Bacteria 54331
174 Ga0496124_0000229 3300048927 Bacteria 109277
175 Ga0496124_0000284 3300048927 Bacteria 96345
176 Ga0496124_0034976 3300048927 Bacteria 4399
177 Ga0496124_0080881 3300048927 Bacteria 2672
178 Ga0496124_0093246 3300048927 Bacteria 2451
179 Ga0496124_0110717 3300048927 Bacteria 2210
180 Ga0496125_0000038 3300048928 Bacteria 328120
181 Ga0496126_0127412 3300048929 Bacteria 2202
182 Ga0495678_000008 3300049459 Bacteria 445926
183 Ga0495682_0000014 3300049460 Bacteria 249706
184 Ga0500651_0005239 3300053093 Bacteria 7386
185 Ga0500618_000439 3300053125 Bacteria 27279
186 Ga0500618_004826 3300053125 Bacteria 4217
187 Ga0500634_0063017 3300053161 Bacteria 1962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053125 Ga0500618_000439 Ga0500618_000439_21416_22348 276
2 3300017792 Ga0163161_10036258 Ga0163161_100362582 280
3 3300046507 Ga0495606_0010276 Ga0495606_0010276_5126_6037 281
4 3300046522 Ga0495643_0002120 Ga0495643_0002120_6739_7662 282
5 3300017792 Ga0163161_10220815 Ga0163161_102208151 283
6 3300048925 Ga0496122_0011698 Ga0496122_0011698_1867_2778 283
7 iso_pu_bacteria 2844665904 2844670872 283
8 3300009011 Ga0105251_10000037 Ga0105251_1000003770 284
9 3300009148 Ga0105243_10003172 Ga0105243_1000317214 284
10 3300009553 Ga0105249_10102056 Ga0105249_101020562 284
11 3300013102 Ga0157371_10002236 Ga0157371_100022364 284
12 3300014497 Ga0182008_10001789 Ga0182008_100017899 284
13 3300025735 Ga0207713_1000226 Ga0207713_10002266 284
14 3300025935 Ga0207709_10001956 Ga0207709_100019562 284
15 3300046501 Ga0495607_0000101 Ga0495607_0000101_10035_10991 284
16 3300046538 Ga0495609_0001600 Ga0495609_0001600_8670_9596 284
17 3300048919 Ga0496116_0000038 Ga0496116_0000038_35679_36587 284
18 3300048920 Ga0496117_0001030 Ga0496117_0001030_15805_16713 284
19 3300048921 Ga0496118_0083581 Ga0496118_0083581_309_1217 284
20 3300048924 Ga0496121_0000377 Ga0496121_0000377_35740_36648 284
21 3300048925 Ga0496122_0004726 Ga0496122_0004726_1439_2347 284
22 3300048926 Ga0496123_0000713 Ga0496123_0000713_17658_18566 284
23 3300046501 Ga0495607_0014300 Ga0495607_0014300_773_1702 285
24 3300048927 Ga0496124_0093246 Ga0496124_0093246_1455_2432 285
25 3300046471 Ga0495650_0000073 Ga0495650_0000073_66260_67180 287
26 3300046474 Ga0495605_0004976 Ga0495605_0004976_3521_4441 287
27 3300046491 Ga0495584_0023391 Ga0495584_0023391_1285_2205 287
28 3300046500 Ga0495596_0020083 Ga0495596_0020083_849_1769 287
29 3300046507 Ga0495606_0000047 Ga0495606_0000047_101272_102192 287
30 3300046512 Ga0495610_0003405 Ga0495610_0003405_11263_12183 287
31 3300046515 Ga0495620_0009709 Ga0495620_0009709_309_1229 287
32 3300046520 Ga0495637_0000313 Ga0495637_0000313_22401_23321 287
33 3300046524 Ga0495648_0132324 Ga0495648_0132324_81_1001 287
34 3300046530 Ga0495654_0000853 Ga0495654_0000853_7139_8059 287
35 3300046538 Ga0495609_0000013 Ga0495609_0000013_94199_95119 287
36 3300046557 Ga0495622_0023185 Ga0495622_0023185_34_954 287
37 3300046648 Ga0495611_0001615 Ga0495611_0001615_7770_8690 287
38 3300046660 Ga0495625_0000016 Ga0495625_0000016_308724_309644 287
39 3300046810 Ga0495660_0010044 Ga0495660_0010044_4427_5347 287
40 3300047321 Ga0495676_0000001 Ga0495676_0000001_412036_412956 287
41 3300047446 Ga0495679_001223 Ga0495679_001223_161_1081 287
42 3300047469 Ga0495673_0014445 Ga0495673_0014445_1784_2704 287
43 3300048091 Ga0495626_0000008 Ga0495626_0000008_62303_63223 287
44 3300048927 Ga0496124_0000229 Ga0496124_0000229_49862_50845 287
45 3300049459 Ga0495678_000008 Ga0495678_000008_438306_439226 287
46 3300053161 Ga0500634_0063017 Ga0500634_0063017_988_1908 288
47 3300002737 JGI25162J39368_1000004 JGI25162J39368_1000004355 289
48 3300002771 JGI25163J39215_1000104 JGI25163J39215_100010425 289
49 3300002772 JGI25164J39214_1000026 JGI25164J39214_100002627 289
50 3300003214 JGI25165J46597_1000011 JGI25165J46597_1000011355 289
51 3300025207 Ga0209760_100096 Ga0209760_10009635 289
52 3300025231 Ga0207427_100003 Ga0207427_100003353 289
53 3300025233 Ga0209437_100002 Ga0209437_100002660 289
54 3300025261 Ga0209233_1000004 Ga0209233_1000004765 289
55 3300053125 Ga0500618_004826 Ga0500618_004826_1888_2832 289
56 3300013105 Ga0157369_10009387 Ga0157369_100093875 290
57 3300009011 Ga0105251_10008635 Ga0105251_100086355 291
58 3300009036 Ga0105244_10007599 Ga0105244_100075995 291
59 3300013102 Ga0157371_10009764 Ga0157371_100097642 291
60 3300013102 Ga0157371_10209086 Ga0157371_102090862 291
61 3300025728 Ga0207655_1020013 Ga0207655_10200131 291
62 3300009011 Ga0105251_10000246 Ga0105251_1000024620 292
63 3300009092 Ga0105250_10000197 Ga0105250_1000019721 292
64 3300017792 Ga0163161_10027916 Ga0163161_100279162 292
65 3300025711 Ga0207696_1000117 Ga0207696_1000117110 292
66 3300025735 Ga0207713_1000160 Ga0207713_100016020 292
67 3300041411 Ga0439466_0000722 Ga0439466_0000722_1818_2741 292
68 3300046522 Ga0495643_0000095 Ga0495643_0000095_29134_30057 292
69 3300046660 Ga0495625_0085892 Ga0495625_0085892_438_1361 292
70 3300046692 Ga0495671_0001131 Ga0495671_0001131_2110_3033 292
71 3300053093 Ga0500651_0005239 Ga0500651_0005239_3873_4886 292
72 3300047470 Ga0495681_0126855 Ga0495681_0126855_69_1007 294
73 3300027312 Ga0209371_1018001 Ga0209371_10180012 295
74 3300030500 Ga0268256_1015819 Ga0268256_10158192 295
75 3300046501 Ga0495607_0000493 Ga0495607_0000493_14816_15733 295
76 3300047322 Ga0495680_0012913 Ga0495680_0012913_3666_4631 295
77 3300048924 Ga0496121_0242199 Ga0496121_0242199_203_1135 295
78 iso_pu_bacteria 3000376612 3000380857 297
79 iso_pu_bacteria 8055817908 8055822188 297
80 iso_pu_bacteria 2554235341 2555669765 298
81 iso_pu_bacteria 2599185160 2599353225 298
82 iso_pu_bacteria 2599185161 2599359562 298
83 iso_pu_bacteria 2599185162 2599364917 298
84 iso_pu_bacteria 2599185163 2599372256 298
85 iso_pu_bacteria 2599185164 2599378333 298
86 iso_pu_bacteria 2599185165 2599384290 298
87 iso_pu_bacteria 2599185166 2599391114 298
88 iso_pu_bacteria 2599185168 2599403299 298
89 iso_pu_bacteria 2599185181 2599460059 298
90 iso_pu_bacteria 2599185182 2599465603 298
91 iso_pu_bacteria 2599185186 2599489080 298
92 iso_pu_bacteria 2599185356 2600212666 298
93 iso_pu_bacteria 2600255313 2601772834 298
94 iso_pu_bacteria 2643221571 2643874170 298
95 iso_pu_bacteria 2667528171 2671095199 298
96 iso_pu_bacteria 2818991464 2819701320 298
97 iso_pu_bacteria 2908446538 2908449838 298
98 iso_pu_bacteria 2917070673 2917073583 298
99 iso_pu_bacteria 2935353572 2935357405 298
100 iso_pu_bacteria 2946006987 2946010045 298
101 iso_pu_bacteria 2947233263 2947237801 298
102 iso_pu_bacteria 637000220 637320103 298
103 iso_pu_bacteria 8019769354 8019771817 298
104 iso_pu_bacteria 8054285046 8054285635 298
105 iso_pu_bacteria 8056148874 8056154807 298
106 iso_pu_bacteria 8057798959 8057800070 298
107 3300046501 Ga0495607_0000037 Ga0495607_0000037_4710_5630 299
108 iso_pu_bacteria 2740892503 2743736839 299
109 iso_pu_bacteria 2923153595 2923155865 299
110 3300009011 Ga0105251_10003166 Ga0105251_100031666 300
111 3300009036 Ga0105244_10001567 Ga0105244_1000156713 300
112 3300014497 Ga0182008_10006111 Ga0182008_100061117 300
113 3300025728 Ga0207655_1000262 Ga0207655_100026240 300
114 3300025735 Ga0207713_1005449 Ga0207713_10054493 300
115 3300046810 Ga0495660_0010196 Ga0495660_0010196_2745_3695 300
116 3300048905 Ga0496102_0138977 Ga0496102_0138977_1089_2063 300
117 3300048906 Ga0496103_0006099 Ga0496103_0006099_1860_2834 300
118 3300048920 Ga0496117_0005942 Ga0496117_0005942_6760_7734 300
119 3300048921 Ga0496118_0001543 Ga0496118_0001543_30747_31721 300
120 iso_pu_bacteria 2599185248 2599768899 300
121 iso_pu_bacteria 2599185289 2599884683 300
122 iso_pu_bacteria 2599185291 2599896138 300
123 iso_pu_bacteria 2599185305 2599958024 300
124 iso_pu_bacteria 2599185306 2599968828 300
125 iso_pu_bacteria 2599185308 2599980028 300
126 iso_pu_bacteria 2599185313 2600003888 300
127 iso_pu_bacteria 2599185314 2600013930 300
128 iso_pu_bacteria 2599185315 2600015747 300
129 iso_pu_bacteria 2599185321 2600050954 300
130 iso_pu_bacteria 2599185324 2600069024 300
131 iso_pu_bacteria 2667528170 2671088832 300
132 iso_pu_bacteria 2923586266 2923588264 300
133 iso_pu_bacteria 2931369376 2931375009 300
134 iso_pu_bacteria 3007395558 3007401409 300
135 3300013105 Ga0157369_10018680 Ga0157369_100186805 301
136 3300014497 Ga0182008_10010464 Ga0182008_100104645 301
137 3300015261 Ga0182006_1021607 Ga0182006_10216072 301
138 3300015262 Ga0182007_10002806 Ga0182007_100028065 301
139 3300042013 Ga0439456_001539 Ga0439456_001539_579_1505 301
140 3300042016 Ga0439463_011810 Ga0439463_011810_727_1653 301
141 3300046512 Ga0495610_0088995 Ga0495610_0088995_281_1186 301
142 3300046520 Ga0495637_0036169 Ga0495637_0036169_699_1607 301
143 3300047470 Ga0495681_0051289 Ga0495681_0051289_909_1817 301
144 iso_pu_bacteria 2511231006 2511265056 301
145 iso_pu_bacteria 2597489887 2597857423 301
146 iso_pu_bacteria 2599185185 2599484641 301
147 iso_pu_bacteria 2599185257 2599802092 301
148 iso_pu_bacteria 2600254931 2600367420 301
149 iso_pu_bacteria 2671180172 2671769040 301
150 iso_pu_bacteria 2919481497 2919483256 301
151 3300005288 Ga0065714_10065788 Ga0065714_100657886 302
152 3300005331 Ga0070670_100008090 Ga0070670_1000080905 302
153 3300013100 Ga0157373_10007550 Ga0157373_100075505 302
154 3300046458 Ga0495591_019983 Ga0495591_019983_566_1474 302
155 3300046530 Ga0495654_0022033 Ga0495654_0022033_1511_2419 302
156 3300046530 Ga0495654_0063829 Ga0495654_0063829_395_1303 302
157 3300046694 Ga0495649_0029765 Ga0495649_0029765_1711_2619 302
158 3300047446 Ga0495679_031321 Ga0495679_031321_309_1217 302
159 3300048927 Ga0496124_0080881 Ga0496124_0080881_359_1267 302
160 iso_pu_bacteria 2600255283 2601623696 302
161 iso_pu_bacteria 8055878733 8055881018 302
162 3300046524 Ga0495648_0002358 Ga0495648_0002358_14660_15577 303
163 iso_pu_bacteria 2599185188 2599501605 303
164 iso_pu_bacteria 2599185300 2599931474 303
165 iso_pu_bacteria 2738543021 2739291875 303
166 iso_pu_bacteria 2791355520 2794597955 303
167 iso_pu_bacteria 8015687852 8015690108 303
168 iso_pu_bacteria 3007803356 3007803824 304
169 3300042009 Ga0439451_001023 Ga0439451_001023_1117_2052 305
170 3300042013 Ga0439456_000939 Ga0439456_000939_3222_4157 305
171 3300042016 Ga0439463_000368 Ga0439463_000368_9740_10681 305
172 3300042016 Ga0439463_009052 Ga0439463_009052_1088_2023 305
173 3300042145 Ga0450906_001770 Ga0450906_001770_1108_2043 305
174 3300042993 Ga0439440_0001995 Ga0439440_0001995_817_1758 305
175 3300046810 Ga0495660_0063588 Ga0495660_0063588_430_1347 305
176 iso_pu_bacteria 3007419365 3007423516 305
177 iso_pu_bacteria 8054929484 8054931506 305
178 3300013100 Ga0157373_10001460 Ga0157373_100014607 306
179 3300013102 Ga0157371_10000384 Ga0157371_1000038430 306
180 3300046458 Ga0495591_000054 Ga0495591_000054_29169_30089 306
181 3300046458 Ga0495591_000116 Ga0495591_000116_6190_7110 306
182 3300046471 Ga0495650_0002240 Ga0495650_0002240_3142_4062 306
183 3300046474 Ga0495605_0000001 Ga0495605_0000001_423836_424756 306
184 3300046474 Ga0495605_0000128 Ga0495605_0000128_28895_29815 306
185 3300046501 Ga0495607_0000053 Ga0495607_0000053_79326_80246 306
186 3300046506 Ga0495583_0000281 Ga0495583_0000281_20077_20997 306
187 3300046506 Ga0495583_0000924 Ga0495583_0000924_1058_1978 306
188 3300046506 Ga0495583_0002312 Ga0495583_0002312_198_1118 306
189 3300046512 Ga0495610_0017361 Ga0495610_0017361_1427_2347 306
190 3300046515 Ga0495620_0000069 Ga0495620_0000069_17390_18310 306
191 3300046519 Ga0495632_0000037 Ga0495632_0000037_114446_115366 306
192 3300046520 Ga0495637_0016334 Ga0495637_0016334_1386_2306 306
193 3300046616 Ga0495668_0013422 Ga0495668_0013422_2943_3863 306
194 3300046665 Ga0495661_0000057 Ga0495661_0000057_79937_80857 306
195 3300047469 Ga0495673_0003650 Ga0495673_0003650_2532_3452 306
196 3300048905 Ga0496102_0092530 Ga0496102_0092530_131_1051 306
197 3300048913 Ga0496110_0274505 Ga0496110_0274505_576_1496 306
198 3300048915 Ga0496112_0210139 Ga0496112_0210139_16_936 306
199 3300048920 Ga0496117_0220568 Ga0496117_0220568_37_957 306
200 3300048921 Ga0496118_0088367 Ga0496118_0088367_1045_1965 306
201 3300048924 Ga0496121_0003237 Ga0496121_0003237_15170_16090 306
202 3300048925 Ga0496122_0021476 Ga0496122_0021476_751_1671 306
203 3300048927 Ga0496124_0000284 Ga0496124_0000284_59292_60212 306
204 3300048927 Ga0496124_0034976 Ga0496124_0034976_865_1785 306
205 3300049460 Ga0495682_0000014 Ga0495682_0000014_150813_151733 306
206 iso_pu_bacteria 2857576091 2857577008 306
207 3300041405 Ga0439438_000008 Ga0439438_000008_107441_108439 307
208 3300041411 Ga0439466_0003058 Ga0439466_0003058_5014_6012 307
209 3300041997 Ga0439431_0000047 Ga0439431_0000047_4816_5814 307
210 3300042004 Ga0439445_0000397 Ga0439445_0000397_4751_5749 307
211 3300042006 Ga0439432_000037 Ga0439432_000037_25097_26095 307
212 3300042010 Ga0439452_001915 Ga0439452_001915_4590_5588 307
213 3300042136 Ga0450900_000862 Ga0450900_000862_981_1916 307
214 3300042142 Ga0450905_000461 Ga0450905_000461_2665_3600 307
215 3300042156 Ga0439446_0001730 Ga0439446_0001730_1759_2757 307
216 3300046492 Ga0495585_0001439 Ga0495585_0001439_14975_15919 307
217 3300046507 Ga0495606_0006339 Ga0495606_0006339_8146_9087 307
218 3300046463 Ga0495653_0002851 Ga0495653_0002851_7889_8815 308
219 3300046507 Ga0495606_0000191 Ga0495606_0000191_100532_101458 308
220 3300046513 Ga0495616_0070208 Ga0495616_0070208_411_1337 308
221 3300046648 Ga0495611_0001509 Ga0495611_0001509_6715_7641 308
222 iso_pu_bacteria 2738541271 2738688851 308
223 iso_pu_bacteria 2738543016 2739264838 308
224 3300009011 Ga0105251_10022838 Ga0105251_100228384 309
225 3300013307 Ga0157372_10324501 Ga0157372_103245012 309
226 3300025735 Ga0207713_1041723 Ga0207713_10417233 309
227 3300041405 Ga0439438_000746 Ga0439438_000746_8050_9012 309
228 3300013308 Ga0157375_10017308 Ga0157375_100173083 310
229 3300046694 Ga0495649_0000110 Ga0495649_0000110_24968_25927 310
230 3300047321 Ga0495676_0009826 Ga0495676_0009826_2586_3587 310
231 2162886007 SwRhRL2b_contig_211735 SwRhRL2b_0549.00000460 311
232 2162886007 SwRhRL2b_contig_679659 SwRhRL2b_0650.00001850 311
233 3300005289 Ga0065704_10001113 Ga0065704_100011137 311
234 3300005289 Ga0065704_10077291 Ga0065704_100772914 311
235 3300009036 Ga0105244_10005495 Ga0105244_100054955 311
236 3300009036 Ga0105244_10049339 Ga0105244_100493393 311
237 3300009148 Ga0105243_10004634 Ga0105243_100046345 311
238 3300009148 Ga0105243_10016433 Ga0105243_100164334 311
239 3300025711 Ga0207696_1000006 Ga0207696_1000006213 311
240 3300025728 Ga0207655_1017419 Ga0207655_10174194 311
241 3300025735 Ga0207713_1004478 Ga0207713_10044784 311
242 3300025935 Ga0207709_10008674 Ga0207709_100086743 311
243 3300046501 Ga0495607_0000448 Ga0495607_0000448_4413_5375 311
244 3300046515 Ga0495620_0000006 Ga0495620_0000006_195772_196707 311
245 3300046519 Ga0495632_0000031 Ga0495632_0000031_5469_6404 311
246 3300046522 Ga0495643_0000143 Ga0495643_0000143_112535_113470 311
247 3300046524 Ga0495648_0000267 Ga0495648_0000267_11844_12779 311
248 3300048919 Ga0496116_0018935 Ga0496116_0018935_3689_4624 311
249 3300048920 Ga0496117_0000460 Ga0496117_0000460_61303_62244 311
250 3300048920 Ga0496117_0000492 Ga0496117_0000492_3657_4592 311
251 3300048921 Ga0496118_0000106 Ga0496118_0000106_22420_23361 311
252 3300048927 Ga0496124_0110717 Ga0496124_0110717_530_1471 311
253 3300048928 Ga0496125_0000038 Ga0496125_0000038_84966_85907 311
254 3300048929 Ga0496126_0127412 Ga0496126_0127412_1030_1971 311

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

21

80

0.96

PF03466

LysR_substrate

LysR substrate binding domain

104

314

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7trv-assembly1.cif.gz_B crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9516 7 87
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9395 7 88
4pzj-assembly1.cif.gz_A-2 1.60 angstrom resolution crystal structure of a transcriptional regulator of the lysr family from eggerthella lenta dsm 2243 0.9391 9 73
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.9389 7 88
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.9361 7 88
ID Description Score Start End Superfamily
af_P30864_1_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9975 7 88 1.10.10.10
af_P77744_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9882 7 88 1.10.10.10
af_P77700_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.984 8 88 1.10.10.10
af_P67662_3_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9837 7 87 1.10.10.10
af_P77171_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.976 7 83 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A258CPL3-F1-model_v4 LysR family transcriptional regulator 0.9959 6 86 GO:0003700
GO:0006351
GO:0043565
AF-A0A658JMP9-F1-model_v4 deleted 0.9775 7 84
AF-A0A376JFC9-F1-model_v4 deleted 0.9494 7 88
AF-A0A6G9Y200-F1-model_v4 LysR family transcriptional regulator 0.9412 7 87 GO:0003677
GO:0003700
GO:0032993
AF-A0A258CPL3-F1-model_v4 LysR family transcriptional regulator 0.9383 6 86 GO:0003700
GO:0006351
GO:0043565

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pLDDT pTM Quality
87.29 0.72 High
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Predicted Structure (AlphaFold2)

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