F364896

General Info

Members Datasets Scaffolds Average Seq Length
254 155 187 1147

Family's Representative Sequence

Representative Sequence 3300015265|Ga0182005_1002164|Ga0182005_10021642
Length 1217
Sequence MMKSLQICLSLVVLVLAAHFSSTVEAEPKTLGLLGRSNVNGGYHVTLDERDWRWLRSKSILLLGASTPDYASFDMTINHDQMEGVTIDYAQLIGELLGLKVEIRRYDSRGEVVDAVRKGDVDFVGTANEYESQFPNMVLSHPYANDKPTLITRKGDGGDLPVDLNGKTIAMLYHYISPDAVRAFYPKATLQVYPSMLSAIGAVAFGQADVYLGDSVSANYLINNNFINNVELADFSRMEVRDFSFVMNSDNQTLIRVVNAAIAAIPVSARMEIMNRWGAGGENMPGKRRLNFSSSEQRWLDEHPSVRVNVVGGYPPLSFVNKSGEFVGIANDVLSKVSLRTGLKFDIQVVPSVSAMVEAVGNSDSEFLATLTPSPVRERVLHFTRPYLASPYVLIAKADADIPIALEQLAGKRLVLTRNNNMHEWLMSNYPKIRLVEADDSEHAMSMVIRGEVDAMVGTLILSSHMINHRFEGQLRIVSTVGNDFAQMAFATSRGALELHSILDKALLSIPPEEMDEIRNRWRNDVMVEDSYWARNRAFIVEVVCGFLVLLALALVWIAYMKVALRRRDEAEHALNEQLEFMRVLIDGTPHPIYIRDRNGILLICNSSYLKVFGVEREAVIGKGKVKLLHPEDASRYEEEFQRITSTGMSMVEDRVIRLLDDRELQIYHWMLPYRDSNGEVGGVIAGWIDISERQALVEQLREAKLVADEAKEHADDANRAKSLFLATMSHEIRTPMNAVIGMLEIAMKKADQGVTDRFAIEVASGAAHGLLDLIGDILDIARIESGRLSLSPERANLRELLESVLRVFEGVARQKRLSLLLDLDFQMPSDVLVDPLRFKQIVSNLLSNAIKFTQDGQVRLSLQARPAKNSQFMTVALVIEDTGIGISDEDQQSLFSPFTQASNNTQSARSGSGLGLVISRTLCEMMGGRLLMSSVFGKGTKVEVHLNLPALEPLAELPGMMPFDVALQHHVLNVLVIDDYPANRLLLSQQLSHLGHRVSDAEDGARGLQAWRSQWFDVVITDCNMPMMSGYELTQVIREEERTQGRVPCLILGYTANAQQEERVRCIEAGMDDCLFKPIGLEELKACLEAVAPMERSEEQTSVHGSNEIDLSSLEQLTRGDKASINSLIGDLSTANEEDMARLIQLFTKHDLNALSGLAHRVKGGARIIRAQRLIQCCEHLEVVCTGRDTSRLAEAVDELQREMEQLADKLSLYVA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231010 Pseudomonas sp. GM25 Isolate Nodule
3 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
4 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
5 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
6 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
7 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
8 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
9 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
10 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
11 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
12 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
13 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
14 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
15 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
16 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
17 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
18 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
19 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
20 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
21 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
22 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
23 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
24 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
25 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
26 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
27 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
28 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
29 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
30 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
31 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
32 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
33 2600254931 Pseudomonas sp. NFIX28 Isolate Rhizoplane
34 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
35 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
36 2643221713 Pseudomonas sp. Root9 Isolate Unclassified
37 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
38 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
39 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
40 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
41 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
42 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
43 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
44 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
45 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
46 2808606377 Pseudomonas sp. SJZ083 Isolate Rhizosphere
47 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
48 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
49 2808606381 Pseudomonas sp. SJZ077 Isolate Rhizosphere
50 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
51 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
52 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
53 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
54 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
55 2919456309 Pseudomonas sp. 3296 Isolate Rhizosphere
56 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
57 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
58 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
59 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
60 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
61 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
62 3007614139 Pseudomonas sp. PB106 Isolate Unclassified
63 3007855910 Pseudomonas khorasanensis SWRI153 Isolate Rhizosphere
64 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
65 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
66 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
67 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
68 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
69 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
70 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
71 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
72 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
73 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
74 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
84 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
91 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
95 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
96 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
97 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
98 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
99 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
100 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
101 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
102 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
103 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
107 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
108 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
132 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
133 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
134 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
135 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
139 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
140 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
141 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
142 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
152 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
153 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
154 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
155 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.62
Metatranscriptomes 0
Isolates 26.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.63
Nodule 0.39
Rhizoplane 13.78
Rhizosphere 66.54
Stem 0
Stem Tuber 0
Unclassified 8.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2433663 2162886007 Bacteria 5060
2 JGI25162J39368_1000078 3300002737 Bacteria 118049
3 JGI25162J39368_1000304 3300002737 Bacteria 45066
4 JGI25163J39215_1000074 3300002771 Bacteria 44810
5 JGI25163J39215_1000187 3300002771 Bacteria 24003
6 JGI25164J39214_1000223 3300002772 Bacteria 45067
7 JGI25164J39214_1000324 3300002772 Bacteria 30847
8 JGI25165J46597_1000143 3300003214 Bacteria 118216
9 JGI25165J46597_1000410 3300003214 Bacteria 45073
10 Ga0055536_1000222 3300003781 Bacteria 46045
11 Ga0055530_10000267 3300003791 Bacteria 47318
12 Ga0055530_10000286 3300003791 Bacteria 46045
13 Ga0055540_1000265 3300003792 Bacteria 47318
14 Ga0055540_1000407 3300003792 Bacteria 34826
15 Ga0065714_10002220 3300005288 Bacteria 47306
16 Ga0065714_10002252 3300005288 Bacteria 49512
17 Ga0065704_10003518 3300005289 Bacteria 10704
18 Ga0065704_10072640 3300005289 Bacteria 8217
19 Ga0105251_10000049 3300009011 Bacteria 108816
20 Ga0105251_10006878 3300009011 Bacteria 7144
21 Ga0105244_10000738 3300009036 Bacteria 27985
22 Ga0105244_10002161 3300009036 Bacteria 15081
23 Ga0105246_10000701 3300011119 Bacteria 18901
24 Ga0157373_10000431 3300013100 Bacteria 33392
25 Ga0157373_10000747 3300013100 Bacteria 25215
26 Ga0157373_10001238 3300013100 Bacteria 19510
27 Ga0157373_10003256 3300013100 Bacteria 12279
28 Ga0157370_10001147 3300013104 Bacteria 33013
29 Ga0157375_10000140 3300013308 Bacteria 72172
30 Ga0182005_1002164 3300015265 Bacteria 7257
31 Ga0182005_1003026 3300015265 Bacteria 5810
32 Ga0209760_100109 3300025207 Bacteria 58898
33 Ga0209760_100188 3300025207 Bacteria 30705
34 Ga0207427_100048 3300025231 Bacteria 238464
35 Ga0207427_100114 3300025231 Bacteria 104357
36 Ga0209437_100094 3300025233 Bacteria 238465
37 Ga0209437_100219 3300025233 Bacteria 104357
38 Ga0209233_1000012 3300025261 Bacteria 1019519
39 Ga0209233_1000106 3300025261 Bacteria 268795
40 Ga0209676_1000017 3300025292 Bacteria 643409
41 Ga0209676_1003682 3300025292 Bacteria 9176
42 Ga0209050_1000076 3300025298 Bacteria 285628
43 Ga0209050_1000079 3300025298 Bacteria 277803
44 Ga0209051_1000050 3300025303 Bacteria 284349
45 Ga0209051_1000054 3300025303 Bacteria 280804
46 Ga0207696_1000006 3300025711 Bacteria 616498
47 Ga0207696_1003266 3300025711 Bacteria 7479
48 Ga0207655_1002340 3300025728 Bacteria 15516
49 Ga0207655_1003663 3300025728 Bacteria 11331
50 Ga0207713_1000243 3300025735 Bacteria 70146
51 Ga0207713_1013509 3300025735 Bacteria 4298
52 Ga0207713_1015412 3300025735 Bacteria 3925
53 Ga0209371_1002575 3300027312 Bacteria 9994
54 Ga0268256_1001491 3300030500 Bacteria 13889
55 Ga0307408_100011742 3300031548 Bacteria 5791
56 Ga0307412_10000326 3300031911 Bacteria 30129
57 Ga0307412_10013461 3300031911 Bacteria 4799
58 Ga0439438_000505 3300041405 Bacteria 17732
59 Ga0439466_0002052 3300041411 Bacteria 7892
60 Ga0439431_0000638 3300041997 Bacteria 7440
61 Ga0439432_000825 3300042006 Bacteria 11558
62 Ga0439451_000551 3300042009 Bacteria 7123
63 Ga0439452_003396 3300042010 Bacteria 5583
64 Ga0495617_000846 3300046452 Bacteria 14528
65 Ga0495603_0006422 3300046455 Bacteria 7038
66 Ga0495590_0000387 3300046457 Bacteria 22358
67 Ga0495590_0000611 3300046457 Bacteria 16664
68 Ga0495590_0000726 3300046457 Bacteria 15068
69 Ga0495591_000040 3300046458 Bacteria 155841
70 Ga0495591_000335 3300046458 Bacteria 42058
71 Ga0495591_000486 3300046458 Bacteria 31441
72 Ga0495591_000643 3300046458 Bacteria 25805
73 Ga0495591_001217 3300046458 Bacteria 16751
74 Ga0495591_001865 3300046458 Bacteria 12415
75 Ga0495638_0005370 3300046460 Bacteria 9554
76 Ga0495638_0005673 3300046460 Bacteria 9198
77 Ga0495653_0003998 3300046463 Bacteria 11907
78 Ga0495650_0000388 3300046471 Bacteria 75543
79 Ga0495650_0001296 3300046471 Bacteria 25404
80 Ga0495650_0004827 3300046471 Bacteria 9030
81 Ga0495605_0000017 3300046474 Bacteria 273775
82 Ga0495605_0001413 3300046474 Bacteria 15763
83 Ga0495584_0001794 3300046491 Bacteria 12485
84 Ga0495584_0010862 3300046491 Bacteria 4673
85 Ga0495585_0000045 3300046492 Bacteria 123148
86 Ga0495585_0000882 3300046492 Bacteria 25487
87 Ga0495585_0004176 3300046492 Bacteria 9434
88 Ga0495594_0001181 3300046499 Bacteria 13668
89 Ga0495607_0000022 3300046501 Bacteria 162516
90 Ga0495607_0000710 3300046501 Bacteria 32135
91 Ga0495607_0000774 3300046501 Bacteria 30589
92 Ga0495607_0000840 3300046501 Bacteria 29047
93 Ga0495607_0000960 3300046501 Bacteria 26655
94 Ga0495607_0002133 3300046501 Bacteria 16504
95 Ga0495607_0006116 3300046501 Bacteria 8514
96 Ga0495583_0000684 3300046506 Bacteria 43822
97 Ga0495583_0000714 3300046506 Bacteria 42527
98 Ga0495583_0001165 3300046506 Bacteria 28541
99 Ga0495583_0002404 3300046506 Bacteria 16086
100 Ga0495606_0000362 3300046507 Bacteria 77675
101 Ga0495606_0000367 3300046507 Bacteria 77313
102 Ga0495606_0000759 3300046507 Bacteria 49624
103 Ga0495606_0003133 3300046507 Bacteria 17936
104 Ga0495610_0010971 3300046512 Bacteria 5579
105 Ga0495616_0000637 3300046513 Bacteria 26228
106 Ga0495616_0001522 3300046513 Bacteria 15979
107 Ga0495620_0000043 3300046515 Bacteria 110904
108 Ga0495620_0000170 3300046515 Bacteria 51293
109 Ga0495620_0001101 3300046515 Bacteria 16520
110 Ga0495620_0001318 3300046515 Bacteria 15071
111 Ga0495620_0001778 3300046515 Bacteria 12676
112 Ga0495620_0005417 3300046515 Bacteria 7115
113 Ga0495620_0007792 3300046515 Bacteria 5784
114 Ga0495631_0000104 3300046518 Bacteria 55509
115 Ga0495631_0007292 3300046518 Bacteria 5632
116 Ga0495631_0007897 3300046518 Bacteria 5386
117 Ga0495632_0000255 3300046519 Bacteria 52928
118 Ga0495632_0001533 3300046519 Bacteria 19079
119 Ga0495632_0003375 3300046519 Bacteria 11377
120 Ga0495637_0000043 3300046520 Bacteria 112526
121 Ga0495637_0000442 3300046520 Bacteria 30284
122 Ga0495637_0001568 3300046520 Bacteria 13312
123 Ga0495637_0002642 3300046520 Bacteria 9800
124 Ga0495643_0000454 3300046522 Bacteria 52085
125 Ga0495643_0002019 3300046522 Bacteria 16923
126 Ga0495643_0025470 3300046522 Bacteria 3347
127 Ga0495644_0002215 3300046523 Bacteria 7777
128 Ga0495648_0000330 3300046524 Bacteria 52286
129 Ga0495648_0000970 3300046524 Bacteria 29610
130 Ga0495648_0002073 3300046524 Bacteria 18975
131 Ga0495654_0006872 3300046530 Bacteria 6417
132 Ga0495654_0010172 3300046530 Bacteria 5128
133 Ga0495609_0000045 3300046538 Bacteria 159595
134 Ga0495609_0000049 3300046538 Bacteria 155608
135 Ga0495609_0012516 3300046538 Bacteria 4025
136 Ga0495622_0000967 3300046557 Bacteria 15423
137 Ga0495633_0002018 3300046558 Bacteria 14672
138 Ga0495611_0000472 3300046648 Bacteria 24021
139 Ga0495625_0000070 3300046660 Bacteria 167336
140 Ga0495625_0011298 3300046660 Bacteria 7291
141 Ga0495661_0000042 3300046665 Bacteria 150599
142 Ga0495661_0000312 3300046665 Bacteria 54893
143 Ga0495661_0000452 3300046665 Bacteria 43465
144 Ga0495661_0001267 3300046665 Bacteria 21722
145 Ga0495661_0001956 3300046665 Bacteria 16352
146 Ga0495661_0006311 3300046665 Bacteria 8338
147 Ga0495613_0001079 3300046689 Bacteria 20797
148 Ga0495670_0002980 3300046691 Bacteria 8344
149 Ga0495671_0004583 3300046692 Bacteria 8226
150 Ga0495649_0001793 3300046694 Bacteria 15792
151 Ga0495589_0000597 3300046794 Bacteria 24594
152 Ga0495660_0001189 3300046810 Bacteria 18284
153 Ga0495660_0003279 3300046810 Bacteria 10043
154 Ga0495660_0006400 3300046810 Bacteria 6967
155 Ga0495672_0000633 3300047320 Bacteria 39285
156 Ga0495676_0000019 3300047321 Bacteria 167261
157 Ga0495676_0000552 3300047321 Bacteria 30763
158 Ga0495683_0000803 3300047323 Bacteria 22340
159 Ga0495679_000049 3300047446 Bacteria 127408
160 Ga0495679_000521 3300047446 Bacteria 27197
161 Ga0495679_000763 3300047446 Bacteria 20506
162 Ga0495679_002050 3300047446 Bacteria 10640
163 Ga0495673_0000411 3300047469 Bacteria 50011
164 Ga0495673_0002073 3300047469 Bacteria 14654
165 Ga0495673_0013025 3300047469 Bacteria 4382
166 Ga0495681_0000723 3300047470 Bacteria 25313
167 Ga0495681_0000781 3300047470 Bacteria 24488
168 Ga0495681_0006232 3300047470 Bacteria 7860
169 Ga0495626_0000080 3300048091 Bacteria 129112
170 Ga0496112_0008651 3300048915 Bacteria 9128
171 Ga0496114_0000889 3300048917 Bacteria 22342
172 Ga0496117_0000272 3300048920 Bacteria 96736
173 Ga0496121_0000804 3300048924 Bacteria 57222
174 Ga0496121_0022290 3300048924 Bacteria 6157
175 Ga0496122_0000667 3300048925 Bacteria 69054
176 Ga0496123_0000163 3300048926 Bacteria 133536
177 Ga0496124_0000714 3300048927 Bacteria 54365
178 Ga0496124_0002940 3300048927 Bacteria 21430
179 Ga0496124_0014647 3300048927 Bacteria 7570
180 Ga0496124_0018220 3300048927 Bacteria 6585
181 Ga0496124_0026601 3300048927 Bacteria 5213
182 Ga0496125_0000038 3300048928 Bacteria 328120
183 Ga0495678_000047 3300049459 Bacteria 168805
184 Ga0495678_003964 3300049459 Bacteria 8855
185 Ga0495682_0000051 3300049460 Bacteria 109996
186 Ga0495682_0000786 3300049460 Bacteria 20129
187 Ga0501226_000539 3300049853 Bacteria 5250

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009011 Ga0105251_10000049 Ga0105251_10000049127 880
2 3300025735 Ga0207713_1000243 Ga0207713_100024311 880
3 3300046522 Ga0495643_0025470 Ga0495643_0025470_32_3196 890
4 3300047470 Ga0495681_0000781 Ga0495681_0000781_40_3453 947
5 3300046471 Ga0495650_0000388 Ga0495650_0000388_9345_12884 972
6 3300046458 Ga0495591_001217 Ga0495591_001217_10057_13566 979
7 3300046491 Ga0495584_0010862 Ga0495584_0010862_140_3649 979
8 3300046506 Ga0495583_0000714 Ga0495583_0000714_15083_18592 979
9 3300046518 Ga0495631_0007897 Ga0495631_0007897_383_3892 979
10 3300046520 Ga0495637_0000043 Ga0495637_0000043_96252_99761 979
11 3300046523 Ga0495644_0002215 Ga0495644_0002215_3628_7137 979
12 3300046665 Ga0495661_0000042 Ga0495661_0000042_135430_138939 979
13 3300047320 Ga0495672_0000633 Ga0495672_0000633_13173_16745 989
14 3300047446 Ga0495679_000049 Ga0495679_000049_117395_120922 991
15 3300048091 Ga0495626_0000080 Ga0495626_0000080_76703_80230 991
16 3300046660 Ga0495625_0000070 Ga0495625_0000070_19455_22964 992
17 3300009011 Ga0105251_10006878 Ga0105251_100068781 994
18 3300025735 Ga0207713_1013509 Ga0207713_10135093 994
19 3300047321 Ga0495676_0000019 Ga0495676_0000019_12002_15511 1003
20 3300046515 Ga0495620_0007792 Ga0495620_0007792_2158_5703 1010
21 3300046538 Ga0495609_0000045 Ga0495609_0000045_33240_36785 1010
22 3300048928 Ga0496125_0000038 Ga0496125_0000038_5303_8575 1011
23 3300046471 Ga0495650_0004827 Ga0495650_0004827_3460_7050 1014
24 3300046515 Ga0495620_0005417 Ga0495620_0005417_1549_5139 1014
25 3300046530 Ga0495654_0010172 Ga0495654_0010172_528_4118 1014
26 3300046660 Ga0495625_0011298 Ga0495625_0011298_1604_5194 1014
27 3300047470 Ga0495681_0006232 Ga0495681_0006232_1656_5246 1014
28 3300048920 Ga0496117_0000272 Ga0496117_0000272_13597_16869 1014
29 3300025711 Ga0207696_1000006 Ga0207696_1000006285 1016
30 3300046507 Ga0495606_0000367 Ga0495606_0000367_25946_29455 1017
31 3300046522 Ga0495643_0000454 Ga0495643_0000454_26637_29906 1017
32 3300049459 Ga0495678_003964 Ga0495678_003964_1593_5120 1017
33 3300025711 Ga0207696_1003266 Ga0207696_10032663 1018
34 3300046515 Ga0495620_0000043 Ga0495620_0000043_99108_102380 1019
35 3300025735 Ga0207713_1015412 Ga0207713_10154122 1020
36 3300027312 Ga0209371_1002575 Ga0209371_100257510 1022
37 3300030500 Ga0268256_1001491 Ga0268256_100149114 1022
38 3300005289 Ga0065704_10003518 Ga0065704_100035186 1023
39 3300048927 Ga0496124_0026601 Ga0496124_0026601_1348_4620 1024
40 3300013104 Ga0157370_10001147 Ga0157370_1000114721 1028
41 3300046455 Ga0495603_0006422 Ga0495603_0006422_3118_6771 1028
42 3300046499 Ga0495594_0001181 Ga0495594_0001181_5082_8735 1028
43 3300046557 Ga0495622_0000967 Ga0495622_0000967_11375_15028 1028
44 3300046691 Ga0495670_0002980 Ga0495670_0002980_826_4479 1028
45 3300046810 Ga0495660_0003279 Ga0495660_0003279_6284_9937 1028
46 3300048924 Ga0496121_0022290 Ga0496121_0022290_351_4004 1028
47 3300009036 Ga0105244_10000738 Ga0105244_1000073824 1031
48 3300025728 Ga0207655_1002340 Ga0207655_10023407 1031
49 3300046501 Ga0495607_0000774 Ga0495607_0000774_14901_18416 1031
50 3300046515 Ga0495620_0001101 Ga0495620_0001101_2985_6500 1031
51 3300046524 Ga0495648_0000970 Ga0495648_0000970_10349_13864 1031
52 3300046665 Ga0495661_0000452 Ga0495661_0000452_14901_18416 1031
53 3300046458 Ga0495591_001865 Ga0495591_001865_3240_6821 1033
54 3300048927 Ga0496124_0018220 Ga0496124_0018220_2871_6524 1036
55 3300046460 Ga0495638_0005673 Ga0495638_0005673_4030_7668 1039
56 3300046474 Ga0495605_0001413 Ga0495605_0001413_552_4130 1039
57 3300013100 Ga0157373_10001238 Ga0157373_100012384 1040
58 3300046530 Ga0495654_0006872 Ga0495654_0006872_1350_4922 1040
59 3300046694 Ga0495649_0001793 Ga0495649_0001793_3340_6912 1040
60 3300046794 Ga0495589_0000597 Ga0495589_0000597_2307_5900 1040
61 3300047446 Ga0495679_000763 Ga0495679_000763_2647_6240 1040
62 3300047446 Ga0495679_002050 Ga0495679_002050_2838_6410 1040
63 3300048927 Ga0496124_0002940 Ga0496124_0002940_3221_6793 1040
64 3300013100 Ga0157373_10003256 Ga0157373_100032569 1041
65 3300046457 Ga0495590_0000387 Ga0495590_0000387_3350_6976 1041
66 3300047470 Ga0495681_0000723 Ga0495681_0000723_3338_6964 1041
67 3300049460 Ga0495682_0000786 Ga0495682_0000786_13557_17183 1041
68 iso_pu_bacteria 2908446538 2908449912 1042
69 3300031911 Ga0307412_10000326 Ga0307412_1000032616 1043
70 3300048917 Ga0496114_0000889 Ga0496114_0000889_3668_6943 1043
71 3300048924 Ga0496121_0000804 Ga0496121_0000804_25326_28940 1043
72 3300009036 Ga0105244_10002161 Ga0105244_100021616 1044
73 3300013308 Ga0157375_10000140 Ga0157375_1000014010 1044
74 3300046507 Ga0495606_0000759 Ga0495606_0000759_21317_24928 1044
75 3300046665 Ga0495661_0006311 Ga0495661_0006311_174_3830 1046
76 3300046518 Ga0495631_0007292 Ga0495631_0007292_481_4119 1047
77 3300046520 Ga0495637_0000442 Ga0495637_0000442_23614_27252 1047
78 3300046524 Ga0495648_0002073 Ga0495648_0002073_14674_18312 1047
79 3300049459 Ga0495678_000047 Ga0495678_000047_32461_36099 1047
80 3300041405 Ga0439438_000505 Ga0439438_000505_4529_7867 1049
81 3300041997 Ga0439431_0000638 Ga0439431_0000638_682_4020 1049
82 3300042006 Ga0439432_000825 Ga0439432_000825_2223_5561 1049
83 3300046460 Ga0495638_0005370 Ga0495638_0005370_3304_6942 1049
84 3300046471 Ga0495650_0001296 Ga0495650_0001296_14493_18131 1049
85 3300046501 Ga0495607_0000710 Ga0495607_0000710_16508_20146 1049
86 iso_pu_bacteria 8055878733 8055880147 1049
87 3300046458 Ga0495591_000486 Ga0495591_000486_2265_5894 1050
88 iso_pu_bacteria 2738541271 2738688853 1051
89 iso_pu_bacteria 2738543016 2739264836 1051
90 iso_pu_bacteria 8055878733 8055880217 1051
91 3300013100 Ga0157373_10000747 Ga0157373_100007479 1052
92 3300042009 Ga0439451_000551 Ga0439451_000551_661_3909 1052
93 3300046501 Ga0495607_0006116 Ga0495607_0006116_2621_6253 1052
94 iso_pu_bacteria 2600254931 2600368193 1052
95 iso_pu_bacteria 8015687852 8015691914 1053
96 3300002737 JGI25162J39368_1000304 JGI25162J39368_100030431 1054
97 3300002771 JGI25163J39215_1000074 JGI25163J39215_100007431 1054
98 3300002772 JGI25164J39214_1000223 JGI25164J39214_100022331 1054
99 3300003214 JGI25165J46597_1000410 JGI25165J46597_100041031 1054
100 3300005288 Ga0065714_10002252 Ga0065714_1000225212 1054
101 3300005289 Ga0065704_10072640 Ga0065704_100726406 1054
102 3300046538 Ga0495609_0012516 Ga0495609_0012516_262_3915 1054
103 iso_pu_bacteria 2600255283 2601624755 1054
104 3300005288 Ga0065714_10002220 Ga0065714_1000222012 1055
105 3300046452 Ga0495617_000846 Ga0495617_000846_8587_12225 1056
106 3300046457 Ga0495590_0000611 Ga0495590_0000611_12057_15695 1056
107 3300046689 Ga0495613_0001079 Ga0495613_0001079_2273_5911 1056
108 3300003791 Ga0055530_10000267 Ga0055530_1000026717 1057
109 3300003792 Ga0055540_1000265 Ga0055540_100026517 1057
110 3300025292 Ga0209676_1003682 Ga0209676_10036824 1057
111 3300025298 Ga0209050_1000079 Ga0209050_1000079231 1057
112 3300025303 Ga0209051_1000054 Ga0209051_1000054234 1057
113 3300025728 Ga0207655_1003663 Ga0207655_10036635 1057
114 3300046458 Ga0495591_000040 Ga0495591_000040_50039_53677 1057
115 3300046458 Ga0495591_000335 Ga0495591_000335_21846_25457 1057
116 3300046474 Ga0495605_0000017 Ga0495605_0000017_52127_55783 1057
117 3300046501 Ga0495607_0000022 Ga0495607_0000022_50365_54003 1057
118 3300046501 Ga0495607_0000840 Ga0495607_0000840_21526_25197 1057
119 3300046506 Ga0495583_0000684 Ga0495583_0000684_21001_24639 1057
120 3300046507 Ga0495606_0000362 Ga0495606_0000362_28151_31789 1057
121 3300046507 Ga0495606_0003133 Ga0495606_0003133_2547_6164 1057
122 3300046512 Ga0495610_0010971 Ga0495610_0010971_1099_4701 1057
123 3300046513 Ga0495616_0000637 Ga0495616_0000637_5153_8791 1057
124 3300046515 Ga0495620_0000170 Ga0495620_0000170_26598_30236 1057
125 3300046648 Ga0495611_0000472 Ga0495611_0000472_20051_23683 1057
126 3300046692 Ga0495671_0004583 Ga0495671_0004583_1317_4955 1057
127 3300047469 Ga0495673_0002073 Ga0495673_0002073_5183_8821 1057
128 3300047469 Ga0495673_0013025 Ga0495673_0013025_650_4282 1057
129 3300048925 Ga0496122_0000667 Ga0496122_0000667_20977_24609 1057
130 3300048926 Ga0496123_0000163 Ga0496123_0000163_85455_89087 1057
131 3300048927 Ga0496124_0000714 Ga0496124_0000714_2421_6077 1057
132 3300048927 Ga0496124_0014647 Ga0496124_0014647_2917_6555 1057
133 3300049460 Ga0495682_0000051 Ga0495682_0000051_32445_36083 1057
134 iso_pu_bacteria 2913036834 2913040787 1057
135 iso_pu_bacteria 3007614139 3007618351 1057
136 iso_pu_bacteria 3007855910 3007860708 1057
137 3300031548 Ga0307408_100011742 Ga0307408_1000117421 1058
138 3300031911 Ga0307412_10013461 Ga0307412_100134612 1058
139 3300046515 Ga0495620_0001778 Ga0495620_0001778_2841_6482 1058
140 3300046519 Ga0495632_0000255 Ga0495632_0000255_34535_38170 1058
141 3300046520 Ga0495637_0002642 Ga0495637_0002642_363_4004 1058
142 3300046538 Ga0495609_0000049 Ga0495609_0000049_112858_116493 1058
143 3300046665 Ga0495661_0000312 Ga0495661_0000312_13348_16983 1058
144 3300047469 Ga0495673_0000411 Ga0495673_0000411_30920_34561 1058
145 3300049853 Ga0501226_000539 Ga0501226_000539_238_3519 1058
146 3300047446 Ga0495679_000521 Ga0495679_000521_8389_12024 1059
147 iso_pu_bacteria 2511231010 2511290315 1059
148 iso_pu_bacteria 2643221713 2644621694 1059
149 iso_pu_bacteria 2919456309 2919462130 1059
150 3300046506 Ga0495583_0001165 Ga0495583_0001165_19789_23451 1060
151 iso_pu_bacteria 2599185212 2599615176 1060
152 iso_pu_bacteria 2599185316 2600025297 1060
153 iso_pu_bacteria 2599185317 2600029811 1060
154 iso_pu_bacteria 2599185318 2600038245 1060
155 iso_pu_bacteria 2599185322 2600061722 1060
156 iso_pu_bacteria 2599185325 2600075977 1060
157 iso_pu_bacteria 2600254930 2600359406 1060
158 iso_pu_bacteria 2667528176 2671128252 1060
159 3300002737 JGI25162J39368_1000078 JGI25162J39368_100007897 1061
160 3300002771 JGI25163J39215_1000187 JGI25163J39215_100018714 1061
161 3300002772 JGI25164J39214_1000324 JGI25164J39214_10003248 1061
162 3300003214 JGI25165J46597_1000143 JGI25165J46597_10001438 1061
163 3300046519 Ga0495632_0001533 Ga0495632_0001533_8308_11937 1061
164 3300046524 Ga0495648_0000330 Ga0495648_0000330_18319_21567 1061
165 iso_pu_bacteria 2599185248 2599769660 1061
166 iso_pu_bacteria 2599185289 2599888980 1061
167 iso_pu_bacteria 2599185291 2599901656 1061
168 iso_pu_bacteria 2599185302 2599942879 1061
169 iso_pu_bacteria 2599185304 2599953628 1061
170 iso_pu_bacteria 2599185305 2599959317 1061
171 iso_pu_bacteria 2599185306 2599967378 1061
172 iso_pu_bacteria 2599185308 2599978712 1061
173 iso_pu_bacteria 2599185309 2599985960 1061
174 iso_pu_bacteria 2599185310 2599988916 1061
175 iso_pu_bacteria 2599185312 2599999621 1061
176 iso_pu_bacteria 2599185313 2600007365 1061
177 iso_pu_bacteria 2599185314 2600012780 1061
178 iso_pu_bacteria 2599185315 2600020460 1061
179 iso_pu_bacteria 2599185320 2600046865 1061
180 iso_pu_bacteria 2599185321 2600054973 1061
181 iso_pu_bacteria 2599185324 2600071623 1061
182 iso_pu_bacteria 2643221650 2644283846 1061
183 iso_pu_bacteria 2667528170 2671093431 1061
184 iso_pu_bacteria 2808606361 2808857598 1061
185 iso_pu_bacteria 2808606376 2808924846 1061
186 iso_pu_bacteria 2808606378 2808937768 1061
187 iso_pu_bacteria 2808606380 2808946948 1061
188 iso_pu_bacteria 2808606383 2808966082 1061
189 iso_pu_bacteria 2808606389 2809001028 1061
190 iso_pu_bacteria 2825651385 2825656753 1061
191 iso_pu_bacteria 2923586266 2923587661 1061
192 iso_pu_bacteria 2929144301 2929148285 1061
193 iso_pu_bacteria 2974289157 2974294517 1061
194 iso_pu_bacteria 2511231156 2511823851 1062
195 iso_pu_bacteria 2808606377 2808931085 1062
196 iso_pu_bacteria 2808606377 2808931086 1062
197 iso_pu_bacteria 2808606381 2808953207 1062
198 iso_pu_bacteria 2808606381 2808953208 1062
199 3300013100 Ga0157373_10000431 Ga0157373_1000043123 1063
200 3300015265 Ga0182005_1002164 Ga0182005_10021642 1063
201 3300015265 Ga0182005_1003026 Ga0182005_10030263 1063
202 3300025207 Ga0209760_100188 Ga0209760_10018813 1063
203 3300025231 Ga0207427_100048 Ga0207427_100048220 1063
204 3300025233 Ga0209437_100094 Ga0209437_100094220 1063
205 3300025261 Ga0209233_1000106 Ga0209233_100010637 1063
206 3300046457 Ga0495590_0000726 Ga0495590_0000726_9219_12854 1063
207 3300046458 Ga0495591_000643 Ga0495591_000643_8153_11788 1063
208 3300046463 Ga0495653_0003998 Ga0495653_0003998_3552_7187 1063
209 3300046491 Ga0495584_0001794 Ga0495584_0001794_2333_5986 1063
210 3300046492 Ga0495585_0000882 Ga0495585_0000882_13539_17174 1063
211 3300046492 Ga0495585_0004176 Ga0495585_0004176_4623_8276 1063
212 3300046501 Ga0495607_0000960 Ga0495607_0000960_14699_18334 1063
213 3300046501 Ga0495607_0002133 Ga0495607_0002133_9239_12892 1063
214 3300046506 Ga0495583_0002404 Ga0495583_0002404_3601_7254 1063
215 3300046513 Ga0495616_0001522 Ga0495616_0001522_3963_7616 1063
216 3300046515 Ga0495620_0001318 Ga0495620_0001318_3865_7518 1063
217 3300046518 Ga0495631_0000104 Ga0495631_0000104_40504_44157 1063
218 3300046519 Ga0495632_0003375 Ga0495632_0003375_5769_9380 1063
219 3300046520 Ga0495637_0001568 Ga0495637_0001568_6712_10365 1063
220 3300046522 Ga0495643_0002019 Ga0495643_0002019_3335_6988 1063
221 3300046558 Ga0495633_0002018 Ga0495633_0002018_3982_7635 1063
222 3300046665 Ga0495661_0001267 Ga0495661_0001267_10644_14279 1063
223 3300046665 Ga0495661_0001956 Ga0495661_0001956_9829_13482 1063
224 3300046810 Ga0495660_0001189 Ga0495660_0001189_8417_12052 1063
225 3300047321 Ga0495676_0000552 Ga0495676_0000552_8337_11972 1063
226 3300047323 Ga0495683_0000803 Ga0495683_0000803_7608_11243 1063
227 3300011119 Ga0105246_10000701 Ga0105246_1000070112 1064
228 3300041411 Ga0439466_0002052 Ga0439466_0002052_1378_5025 1064
229 iso_pu_bacteria 2599185311 2599997943 1064
230 iso_pu_bacteria 2599185319 2600041955 1064
231 iso_pu_bacteria 2599185323 2600067810 1064
232 3300003781 Ga0055536_1000222 Ga0055536_100022215 1065
233 3300003791 Ga0055530_10000286 Ga0055530_1000028615 1065
234 3300003792 Ga0055540_1000407 Ga0055540_100040714 1065
235 3300025292 Ga0209676_1000017 Ga0209676_100001715 1065
236 3300025298 Ga0209050_1000076 Ga0209050_100007615 1065
237 3300025303 Ga0209051_1000050 Ga0209051_1000050217 1065
238 3300046492 Ga0495585_0000045 Ga0495585_0000045_67965_71588 1065
239 3300046810 Ga0495660_0006400 Ga0495660_0006400_1294_4917 1065
240 iso_pu_bacteria 2599185188 2599503056 1065
241 iso_pu_bacteria 2599185300 2599933605 1065
242 iso_pu_bacteria 2675903515 2678264311 1065
243 iso_pu_bacteria 2744054620 2745004766 1065
244 iso_pu_bacteria 2931369376 2931374306 1065
245 2162886007 SwRhRL2b_contig_2433663 SwRhRL2b_0603.00005990 1066
246 3300025207 Ga0209760_100109 Ga0209760_10010913 1066
247 3300025231 Ga0207427_100114 Ga0207427_10011426 1066
248 3300025233 Ga0209437_100219 Ga0209437_10021926 1066
249 3300025261 Ga0209233_1000012 Ga0209233_1000012904 1066
250 3300042010 Ga0439452_003396 Ga0439452_003396_1624_4872 1066
251 3300048915 Ga0496112_0008651 Ga0496112_0008651_4877_8518 1066
252 iso_pu_bacteria 2791355520 2794596596 1066
253 iso_pu_bacteria 2919481497 2919484194 1066
254 iso_pu_bacteria 2988728565 2988729924 1066

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00989

PAS

PAS fold

580

691

0.97

PF00497

SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

306

525

0.96

PF00497

SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

62

280

0.93

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

721

787

0.93

PF08448

PAS_4

PAS fold

586

696

0.93

PF00072

Response_reg

Response regulator receiver domain

975

1090

0.92

PF01627

Hpt

Hpt domain

1128

1211

0.92

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

834

951

0.92

PF13426

PAS_9

PAS domain

590

693

0.87

Feature Viewer

pLDDT pTM Quality
78.29 0.37 Low
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Predicted Structure (AlphaFold2)

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