F360773

General Info

Members Datasets Scaffolds Average Seq Length
249 135 498 236

Family's Representative Sequence

Representative Sequence 3300022730|Ga0224570_100030|Ga0224570_1000302
Length 277
Sequence VLLKFIFGPAFHLFLRRKGDVCHKRTHRCASFTSTRRFCHNLPVCGRYKLSRRKQIVEEYFDTASGEEDWSPRYNVAPTQPVPVIRQHPKETVRELSLMRWGLIPSWSKDSSVAASMINARSETAATKPAFRDALKSRRCLIPADGFYEWTRTGKTKQPYCFEVNEGELFAFAGIWDRWKDPSGNWMKTSSILTTTPNAVTSAVHDRMPVILDPDAYDLWLDPGMQNVAAVSDLLKPHNARLMRCYPVSTRINHVANDDEACSAPVELVEIQNRLFQ

Samples

Sample ID Description Type Environment
1 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
60 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
61 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
62 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
100 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.79
Metatranscriptomes 3.21
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.2
Rhizosphere 97.99
Stem 0
Stem Tuber 0
Unclassified 22.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0224570_100030 3300022730 Bacteria 6683
2 Ga0065715_10249792 3300005293 Bacteria 1171
3 Ga0065715_10265563 3300005293 Unclassified 1125
4 Ga0070658_10564712 3300005327 Unclassified 985
5 Ga0070683_100012543 3300005329 Bacteria 7367
6 Ga0070683_100404622 3300005329 Bacteria 1302
7 Ga0070670_100004540 3300005331 Bacteria 11639
8 Ga0070680_100021335 3300005336 Bacteria 5146
9 Ga0068868_100001206 3300005338 Bacteria 17742
10 Ga0070661_100086747 3300005344 Bacteria 2314
11 Ga0070674_100467460 3300005356 Unclassified 1044
12 Ga0070659_100201815 3300005366 Unclassified 1637
13 Ga0070709_10023327 3300005434 Bacteria 3630
14 Ga0070709_10190857 3300005434 Bacteria 1445
15 Ga0070714_100112235 3300005435 Bacteria 2415
16 Ga0070714_100221378 3300005435 Bacteria 1739
17 Ga0070714_100266977 3300005435 Unclassified 1586
18 Ga0070713_100000747 3300005436 Bacteria 20853
19 Ga0070713_100008082 3300005436 Bacteria 7439
20 Ga0070713_100343870 3300005436 Bacteria 1383
21 Ga0070710_10025067 3300005437 Bacteria 3154
22 Ga0070711_100000808 3300005439 Bacteria 16388
23 Ga0070711_100037625 3300005439 Bacteria 3248
24 Ga0070711_100048503 3300005439 Bacteria 2904
25 Ga0070711_100738434 3300005439 Bacteria 831
26 Ga0070708_100002130 3300005445 Bacteria 15293
27 Ga0070708_100002799 3300005445 Bacteria 13552
28 Ga0070662_100033719 3300005457 Unclassified 3607
29 Ga0070681_10003496 3300005458 Bacteria 14711
30 Ga0070681_10012025 3300005458 Bacteria 8583
31 Ga0070681_10123417 3300005458 Bacteria 2523
32 Ga0070681_10175092 3300005458 Bacteria 2067
33 Ga0070706_100021895 3300005467 Bacteria 5886
34 Ga0070706_100022337 3300005467 Bacteria 5826
35 Ga0070706_100034838 3300005467 Bacteria 4649
36 Ga0070706_100057491 3300005467 Bacteria 3589
37 Ga0070706_100062761 3300005467 Bacteria 3433
38 Ga0070706_100296095 3300005467 Bacteria 1510
39 Ga0070706_100471783 3300005467 Bacteria 1167
40 Ga0070707_100014712 3300005468 Bacteria 7334
41 Ga0070707_100027001 3300005468 Bacteria 5459
42 Ga0070707_100138370 3300005468 Bacteria 2369
43 Ga0070707_100760804 3300005468 Unclassified 932
44 Ga0070698_100002491 3300005471 Bacteria 20294
45 Ga0070698_100015591 3300005471 Bacteria 8026
46 Ga0070698_100020950 3300005471 Bacteria 6851
47 Ga0070698_100047853 3300005471 Bacteria 4371
48 Ga0070699_100003407 3300005518 Bacteria 14064
49 Ga0070699_100006100 3300005518 Bacteria 10548
50 Ga0070699_100051298 3300005518 Bacteria 3571
51 Ga0070679_100027129 3300005530 Bacteria 5633
52 Ga0070679_100161071 3300005530 Bacteria 2218
53 Ga0070679_100188846 3300005530 Bacteria 2030
54 Ga0070684_100046104 3300005535 Bacteria 3776
55 Ga0070684_100049655 3300005535 Unclassified 3642
56 Ga0070697_100001563 3300005536 Bacteria 17424
57 Ga0070697_100002555 3300005536 Bacteria 14011
58 Ga0070697_100019944 3300005536 Bacteria 5299
59 Ga0070697_100052969 3300005536 Bacteria 3298
60 Ga0070695_100114609 3300005545 Bacteria 1835
61 Ga0070693_100094584 3300005547 Unclassified 1808
62 Ga0068855_100027531 3300005563 Bacteria 6799
63 Ga0070664_100000309 3300005564 Bacteria 35583
64 Ga0068857_100020557 3300005577 Bacteria 5808
65 Ga0068857_100104320 3300005577 Bacteria 2545
66 Ga0068854_100051730 3300005578 Unclassified 2943
67 Ga0068856_100487562 3300005614 Unclassified 1253
68 Ga0070702_100398894 3300005615 Unclassified 983
69 Ga0068859_100046382 3300005617 Unclassified 4364
70 Ga0068864_100022009 3300005618 Bacteria 5343
71 Ga0068866_10009223 3300005718 Unclassified 4184
72 Ga0068863_100203379 3300005841 Bacteria 1905
73 Ga0068858_100010142 3300005842 Bacteria 8943
74 Ga0068860_100032358 3300005843 Bacteria 5025
75 Ga0070717_10000967 3300006028 Bacteria 19187
76 Ga0070717_10011295 3300006028 Bacteria 6777
77 Ga0070717_10020054 3300006028 Bacteria 5253
78 Ga0070717_10265313 3300006028 Bacteria 1520
79 Ga0070717_10405560 3300006028 Unclassified 1225
80 Ga0070715_10004554 3300006163 Bacteria 4563
81 Ga0070715_10030108 3300006163 Bacteria 2192
82 Ga0070715_10084091 3300006163 Bacteria 1451
83 Ga0070715_10094499 3300006163 Unclassified 1382
84 Ga0070716_100203821 3300006173 Bacteria 1317
85 Ga0070716_100217899 3300006173 Bacteria 1280
86 Ga0070712_100009068 3300006175 Bacteria 6264
87 Ga0070712_100049778 3300006175 Bacteria 2911
88 Ga0070712_100059210 3300006175 Bacteria 2696
89 Ga0070712_100086265 3300006175 Unclassified 2288
90 Ga0070712_100294323 3300006175 Bacteria 1312
91 Ga0097621_100078543 3300006237 Bacteria 2742
92 Ga0068871_100106404 3300006358 Bacteria 2355
93 Ga0075433_10091065 3300006852 Bacteria 2696
94 Ga0075434_100018380 3300006871 Bacteria 6752
95 Ga0075434_100511983 3300006871 Bacteria 1221
96 Ga0075434_100692960 3300006871 Unclassified 1036
97 Ga0068865_100007468 3300006881 Bacteria 6728
98 Ga0097620_100046382 3300006931 Unclassified 4364
99 Ga0075435_100103067 3300007076 Bacteria 2366
100 Ga0105240_10006081 3300009093 Bacteria 17817
101 Ga0105240_10154359 3300009093 Bacteria 2732
102 Ga0105240_10345399 3300009093 Plasmid 1689
103 Ga0105238_10147717 3300009551 Bacteria 2327
104 Ga0099796_10071402 3300010159 Bacteria 1254
105 Ga0105239_11184579 3300010375 Bacteria 880
106 Ga0157370_10209420 3300013104 Bacteria 1807
107 Ga0157369_11007465 3300013105 Unclassified 853
108 Ga0157372_10003952 3300013307 Bacteria 15918
109 Ga0157372_10121279 3300013307 Bacteria 3003
110 Ga0157372_10121582 3300013307 Bacteria 2999
111 Ga0157372_10313997 3300013307 Bacteria 1824
112 Ga0157376_10564641 3300014969 Bacteria 1128
113 Ga0213874_10097709 3300021377 Bacteria 972
114 Ga0224569_100898 3300022732 Bacteria 2533
115 Ga0224572_1006186 3300024225 Bacteria 2159
116 Ga0207692_10333514 3300025898 Bacteria 931
117 Ga0207685_10010448 3300025905 Bacteria 2742
118 Ga0207685_10029267 3300025905 Bacteria 1948
119 Ga0207699_10013797 3300025906 Bacteria 4146
120 Ga0207699_10299329 3300025906 Bacteria 1123
121 Ga0207684_10000375 3300025910 Bacteria 60578
122 Ga0207684_10000895 3300025910 Bacteria 33890
123 Ga0207684_10140199 3300025910 Bacteria 2078
124 Ga0207684_10378673 3300025910 Bacteria 1217
125 Ga0207707_10082050 3300025912 Bacteria 2815
126 Ga0207707_10146122 3300025912 Bacteria 2067
127 Ga0207695_10033518 3300025913 Bacteria 5599
128 Ga0207695_10352786 3300025913 Bacteria 1358
129 Ga0207695_10437497 3300025913 Plasmid 1191
130 Ga0207693_10000158 3300025915 Bacteria 63123
131 Ga0207693_10021904 3300025915 Bacteria 5081
132 Ga0207693_10086061 3300025915 Bacteria 2462
133 Ga0207693_10148319 3300025915 Unclassified 1844
134 Ga0207693_10219267 3300025915 Bacteria 1495
135 Ga0207693_10347899 3300025915 Bacteria 1160
136 Ga0207663_10026475 3300025916 Bacteria 3367
137 Ga0207663_10057697 3300025916 Unclassified 2447
138 Ga0207649_10011246 3300025920 Unclassified 4930
139 Ga0207652_10094990 3300025921 Bacteria 2626
140 Ga0207652_10429344 3300025921 Unclassified 1191
141 Ga0207646_10003461 3300025922 Bacteria 17826
142 Ga0207646_10007184 3300025922 Bacteria 11373
143 Ga0207646_10268494 3300025922 Bacteria 1542
144 Ga0207646_10277346 3300025922 Bacteria 1515
145 Ga0207694_10139524 3300025924 Bacteria 1949
146 Ga0207694_10236324 3300025924 Unclassified 1493
147 Ga0207650_10146319 3300025925 Unclassified 1861
148 Ga0207700_10000940 3300025928 Bacteria 16752
149 Ga0207700_10013302 3300025928 Bacteria 5348
150 Ga0207700_10128673 3300025928 Bacteria 2064
151 Ga0207700_10435588 3300025928 Bacteria 1153
152 Ga0207700_10680160 3300025928 Unclassified 918
153 Ga0207700_10794300 3300025928 Unclassified 846
154 Ga0207664_10004933 3300025929 Bacteria 9074
155 Ga0207664_10088394 3300025929 Bacteria 2535
156 Ga0207664_10115069 3300025929 Bacteria 2242
157 Ga0207664_10226464 3300025929 Unclassified 1624
158 Ga0207664_10451925 3300025929 Bacteria 1147
159 Ga0207664_10675252 3300025929 Bacteria 929
160 Ga0207706_10018585 3300025933 Bacteria 6254
161 Ga0207704_10088700 3300025938 Unclassified 2024
162 Ga0207665_10012410 3300025939 Bacteria 5596
163 Ga0207665_10505276 3300025939 Unclassified 934
164 Ga0207661_10520028 3300025944 Bacteria 1088
165 Ga0207679_10004513 3300025945 Bacteria 8670
166 Ga0207667_10562594 3300025949 Unclassified 1152
167 Ga0207640_10039945 3300025981 Bacteria 2973
168 Ga0207677_10009660 3300026023 Bacteria 5432
169 Ga0207703_10084279 3300026035 Unclassified 2657
170 Ga0207702_10088665 3300026078 Bacteria 2703
171 Ga0207702_10555853 3300026078 Unclassified 1123
172 Ga0207641_10015584 3300026088 Bacteria 6230
173 Ga0207676_10042548 3300026095 Unclassified 3494
174 Ga0207674_10000468 3300026116 Bacteria 52966
175 Ga0207674_10124794 3300026116 Bacteria 2541
176 Ga0207675_100914368 3300026118 Unclassified 894
177 Ga0268264_10088178 3300028381 Unclassified 2669
178 Ga0265338_10003739 3300028800 Bacteria 21157
179 Ga0265338_10116810 3300028800 Unclassified 2136
180 Ga0265338_10130024 3300028800 Unclassified 1990
181 Ga0265338_10368296 3300028800 Unclassified 1029
182 Ga0265762_1000782 3300030760 Bacteria 5691
183 Ga0265762_1001844 3300030760 Bacteria 3850
184 Ga0265762_1004550 3300030760 Bacteria 2482
185 Ga0265762_1017432 3300030760 Bacteria 1307
186 Ga0265762_1028912 3300030760 Bacteria 1046
187 Ga0265760_10000697 3300031090 Bacteria 9560
188 Ga0265760_10031352 3300031090 Bacteria 1568
189 Ga0265760_10102353 3300031090 Unclassified 906
190 Ga0265339_10025025 3300031249 Bacteria 3433
191 Ga0265339_10032362 3300031249 Unclassified 2950
192 Ga0265316_10029230 3300031344 Unclassified 4534
193 Ga0265316_10331132 3300031344 Unclassified 1105
194 Ga0265314_10030350 3300031711 Bacteria 4002
195 Ga0265342_10100419 3300031712 Bacteria 1649
196 Ga0373943_0209261 3300035170 Bacteria 1082
197 Ga0373946_0173860 3300035171 Bacteria 1018
198 Ga0373955_0028670 3300035172 Bacteria 2889
199 Ga0316574_0251325 3300035398 Bacteria 1130
200 Ga0373935_0061961 3300035692 Bacteria 2395
201 Ga0373927_0166830 3300035695 Unclassified 1443
202 Ga0373947_0014690 3300035725 Bacteria 4492
203 Ga0373947_0034231 3300035725 Bacteria 3004
204 Ga0373937_0010588 3300036401 Bacteria 8059
205 Ga0373937_0601062 3300036401 Bacteria 1044
206 Ga0373925_0002359 3300037068 Bacteria 15153
207 Ga0373925_0015847 3300037068 Bacteria 5453
208 Ga0373925_0093921 3300037068 Bacteria 2296
209 Ga0373925_0100269 3300037068 Bacteria 2225
210 Ga0373925_0388587 3300037068 Bacteria 1137
211 Ga0373925_0488010 3300037068 Unclassified 1011
212 Ga0436363_0103427 3300039450 Bacteria 1524
213 Ga0451577_0394206 3300042876 Bacteria 1256
214 Ga0453683_0017958 3300044673 Bacteria 4544
215 Ga0453683_0027726 3300044673 Unclassified 3589
216 Ga0466961_0328513 3300044693 Unclassified 932
217 Ga0466959_0214737 3300045049 Bacteria 1336
218 Ga0451576_0172556 3300045051 Unclassified 2257
219 Ga0495629_0063020 3300046459 Bacteria 2589
220 Ga0495629_0529044 3300046459 Unclassified 793
221 Ga0495641_0057403 3300046461 Bacteria 1764
222 Ga0495580_0000012 3300046472 Bacteria 97735
223 Ga0495580_0000420 3300046472 Bacteria 35207
224 Ga0495580_0005172 3300046472 Bacteria 10850
225 Ga0495580_0096922 3300046472 Unclassified 2051
226 Ga0495580_0119991 3300046472 Bacteria 1826
227 Ga0495580_0232444 3300046472 Bacteria 1265
228 Ga0495582_0004480 3300046473 Bacteria 7853
229 Ga0495582_0008031 3300046473 Bacteria 5826
230 Ga0495608_0178581 3300046511 Bacteria 1344
231 Ga0495652_0236306 3300046529 Bacteria 1363
232 Ga0495588_0245844 3300046674 Bacteria 943
233 Ga0495669_0022072 3300046684 Unclassified 2765
234 Ga0495624_0274996 3300046690 Bacteria 1017
235 Ga0495581_0162895 3300047315 Bacteria 1304
236 Ga0495581_0379266 3300047315 Bacteria 825
237 Ga0495674_0012145 3300047319 Bacteria 8118
238 Ga0495676_0191557 3300047321 Bacteria 1426
239 Ga0495684_0142238 3300047471 Unclassified 1798
240 Ga0495593_0104196 3300047673 Bacteria 1453
241 Ga0496102_1002558 3300048905 Unclassified 756
242 Ga0496105_0546055 3300048908 Bacteria 905
243 Ga0496115_0112351 3300048918 Bacteria 2238
244 Ga0501081_0354533 3300049743 Archaea 1082
245 nmdc:mga0n895_177213_c1 3300050512 Bacteria 2163
246 nmdc:mga0n895_45782_c1 3300050512 Unclassified 4271
247 nmdc:mga0rr50_124552_c1 3300050513 Bacteria 2056
248 nmdc:mga0a205_7105_c2 3300050515 Bacteria 4490
249 Ga0495601_0080588 3300053077 Bacteria 2089
250 Ga0224570_100030
251 Ga0065715_10249792
252 Ga0065715_10265563
253 Ga0070658_10564712
254 Ga0070683_100012543
255 Ga0070683_100404622
256 Ga0070670_100004540
257 Ga0070680_100021335
258 Ga0068868_100001206
259 Ga0070661_100086747
260 Ga0070674_100467460
261 Ga0070659_100201815
262 Ga0070709_10023327
263 Ga0070709_10190857
264 Ga0070714_100112235
265 Ga0070714_100221378
266 Ga0070714_100266977
267 Ga0070713_100000747
268 Ga0070713_100008082
269 Ga0070713_100343870
270 Ga0070710_10025067
271 Ga0070711_100000808
272 Ga0070711_100037625
273 Ga0070711_100048503
274 Ga0070711_100738434
275 Ga0070708_100002130
276 Ga0070708_100002799
277 Ga0070662_100033719
278 Ga0070681_10003496
279 Ga0070681_10012025
280 Ga0070681_10123417
281 Ga0070681_10175092
282 Ga0070706_100021895
283 Ga0070706_100022337
284 Ga0070706_100034838
285 Ga0070706_100057491
286 Ga0070706_100062761
287 Ga0070706_100296095
288 Ga0070706_100471783
289 Ga0070707_100014712
290 Ga0070707_100027001
291 Ga0070707_100138370
292 Ga0070707_100760804
293 Ga0070698_100002491
294 Ga0070698_100015591
295 Ga0070698_100020950
296 Ga0070698_100047853
297 Ga0070699_100003407
298 Ga0070699_100006100
299 Ga0070699_100051298
300 Ga0070679_100027129
301 Ga0070679_100161071
302 Ga0070679_100188846
303 Ga0070684_100046104
304 Ga0070684_100049655
305 Ga0070697_100001563
306 Ga0070697_100002555
307 Ga0070697_100019944
308 Ga0070697_100052969
309 Ga0070695_100114609
310 Ga0070693_100094584
311 Ga0068855_100027531
312 Ga0070664_100000309
313 Ga0068857_100020557
314 Ga0068857_100104320
315 Ga0068854_100051730
316 Ga0068856_100487562
317 Ga0070702_100398894
318 Ga0068859_100046382
319 Ga0068864_100022009
320 Ga0068866_10009223
321 Ga0068863_100203379
322 Ga0068858_100010142
323 Ga0068860_100032358
324 Ga0070717_10000967
325 Ga0070717_10011295
326 Ga0070717_10020054
327 Ga0070717_10265313
328 Ga0070717_10405560
329 Ga0070715_10004554
330 Ga0070715_10030108
331 Ga0070715_10084091
332 Ga0070715_10094499
333 Ga0070716_100203821
334 Ga0070716_100217899
335 Ga0070712_100009068
336 Ga0070712_100049778
337 Ga0070712_100059210
338 Ga0070712_100086265
339 Ga0070712_100294323
340 Ga0097621_100078543
341 Ga0068871_100106404
342 Ga0075433_10091065
343 Ga0075434_100018380
344 Ga0075434_100511983
345 Ga0075434_100692960
346 Ga0068865_100007468
347 Ga0097620_100046382
348 Ga0075435_100103067
349 Ga0105240_10006081
350 Ga0105240_10154359
351 Ga0105240_10345399
352 Ga0105238_10147717
353 Ga0099796_10071402
354 Ga0105239_11184579
355 Ga0157370_10209420
356 Ga0157369_11007465
357 Ga0157372_10003952
358 Ga0157372_10121279
359 Ga0157372_10121582
360 Ga0157372_10313997
361 Ga0157376_10564641
362 Ga0213874_10097709
363 Ga0224569_100898
364 Ga0224572_1006186
365 Ga0207692_10333514
366 Ga0207685_10010448
367 Ga0207685_10029267
368 Ga0207699_10013797
369 Ga0207699_10299329
370 Ga0207684_10000375
371 Ga0207684_10000895
372 Ga0207684_10140199
373 Ga0207684_10378673
374 Ga0207707_10082050
375 Ga0207707_10146122
376 Ga0207695_10033518
377 Ga0207695_10352786
378 Ga0207695_10437497
379 Ga0207693_10000158
380 Ga0207693_10021904
381 Ga0207693_10086061
382 Ga0207693_10148319
383 Ga0207693_10219267
384 Ga0207693_10347899
385 Ga0207663_10026475
386 Ga0207663_10057697
387 Ga0207649_10011246
388 Ga0207652_10094990
389 Ga0207652_10429344
390 Ga0207646_10003461
391 Ga0207646_10007184
392 Ga0207646_10268494
393 Ga0207646_10277346
394 Ga0207694_10139524
395 Ga0207694_10236324
396 Ga0207650_10146319
397 Ga0207700_10000940
398 Ga0207700_10013302
399 Ga0207700_10128673
400 Ga0207700_10435588
401 Ga0207700_10680160
402 Ga0207700_10794300
403 Ga0207664_10004933
404 Ga0207664_10088394
405 Ga0207664_10115069
406 Ga0207664_10226464
407 Ga0207664_10451925
408 Ga0207664_10675252
409 Ga0207706_10018585
410 Ga0207704_10088700
411 Ga0207665_10012410
412 Ga0207665_10505276
413 Ga0207661_10520028
414 Ga0207679_10004513
415 Ga0207667_10562594
416 Ga0207640_10039945
417 Ga0207677_10009660
418 Ga0207703_10084279
419 Ga0207702_10088665
420 Ga0207702_10555853
421 Ga0207641_10015584
422 Ga0207676_10042548
423 Ga0207674_10000468
424 Ga0207674_10124794
425 Ga0207675_100914368
426 Ga0268264_10088178
427 Ga0265338_10003739
428 Ga0265338_10116810
429 Ga0265338_10130024
430 Ga0265338_10368296
431 Ga0265762_1000782
432 Ga0265762_1001844
433 Ga0265762_1004550
434 Ga0265762_1017432
435 Ga0265762_1028912
436 Ga0265760_10000697
437 Ga0265760_10031352
438 Ga0265760_10102353
439 Ga0265339_10025025
440 Ga0265339_10032362
441 Ga0265316_10029230
442 Ga0265316_10331132
443 Ga0265314_10030350
444 Ga0265342_10100419
445 Ga0373943_0209261
446 Ga0373946_0173860
447 Ga0373955_0028670
448 Ga0316574_0251325
449 Ga0373935_0061961
450 Ga0373927_0166830
451 Ga0373947_0014690
452 Ga0373947_0034231
453 Ga0373937_0010588
454 Ga0373937_0601062
455 Ga0373925_0002359
456 Ga0373925_0015847
457 Ga0373925_0093921
458 Ga0373925_0100269
459 Ga0373925_0388587
460 Ga0373925_0488010
461 Ga0436363_0103427
462 Ga0451577_0394206
463 Ga0453683_0017958
464 Ga0453683_0027726
465 Ga0466961_0328513
466 Ga0466959_0214737
467 Ga0451576_0172556
468 Ga0495629_0063020
469 Ga0495629_0529044
470 Ga0495641_0057403
471 Ga0495580_0000012
472 Ga0495580_0000420
473 Ga0495580_0005172
474 Ga0495580_0096922
475 Ga0495580_0119991
476 Ga0495580_0232444
477 Ga0495582_0004480
478 Ga0495582_0008031
479 Ga0495608_0178581
480 Ga0495652_0236306
481 Ga0495588_0245844
482 Ga0495669_0022072
483 Ga0495624_0274996
484 Ga0495581_0162895
485 Ga0495581_0379266
486 Ga0495674_0012145
487 Ga0495676_0191557
488 Ga0495684_0142238
489 Ga0495593_0104196
490 Ga0496102_1002558
491 Ga0496105_0546055
492 Ga0496115_0112351
493 Ga0501081_0354533
494 nmdc:mga0n895_177213_c1
495 nmdc:mga0n895_45782_c1
496 nmdc:mga0rr50_124552_c1
497 nmdc:mga0a205_7105_c2
498 Ga0495601_0080588

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02586

SRAP

SOS response associated peptidase (SRAP)

44

255

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6oea-assembly1.cif.gz_A crystal structure of hmces srap domain in complex with longer 3' overhang dna 0.9112 2 223
6oov-assembly1.cif.gz_B-2 crystal structure of hmces srap domain in complex with palindromic 3' overhang dna 0.9053 2 223
6oeb-assembly1.cif.gz_A crystal structure of hmces srap domain in complex with 3' overhang dna 0.9032 2 223
6oov-assembly1.cif.gz_A crystal structure of hmces srap domain in complex with palindromic 3' overhang dna 0.9009 2 223
2f20-assembly2.cif.gz_B x-ray crystal structure of protein bt_1218 from bacteroides thetaiotaomicron. northeast structural genomics consortium target btr8. 0.8955 4 224
ID Description Score Start End Superfamily
af_I1KYZ5_1_237_3.90.1680.10 Alpha Beta;Alpha-Beta Complex;hypothetical protein yedk fold;SOS response associated peptidase-like 0.9138 1 229 3.90.1680.10
6nlcA00 Alpha Beta;Alpha-Beta Complex;hypothetical protein yedk fold;SOS response associated peptidase-like 0.9111 2 223 3.90.1680.10
af_O05872_1_242_3.90.1680.10 Alpha Beta;Alpha-Beta Complex;hypothetical protein yedk fold;SOS response associated peptidase-like 0.8912 1 223 3.90.1680.10
af_I1KYZ5_1_237_3.90.1680.10 Alpha Beta;Alpha-Beta Complex;hypothetical protein yedk fold;SOS response associated peptidase-like 0.8879 1 229 3.90.1680.10
af_Q9VHI3_1_291_3.90.1680.10 Alpha Beta;Alpha-Beta Complex;hypothetical protein yedk fold;SOS response associated peptidase-like 0.8622 1 222 3.90.1680.10
ID Description Score Start End GO Terms
AF-A0A2N2L8D2-F1-model_v4 Abasic site processing protein (EC 3.4.-.-) 0.9872 74 206 GO:0003697
GO:0006508
GO:0008233
GO:0016829
GO:0106300
AF-A0A518VBK7-F1-model_v4 Abasic site processing protein (EC 3.4.-.-) 0.984 56 214 GO:0003697
GO:0006508
GO:0008233
GO:0016829
GO:0106300
AF-A0A383CZ81-F1-model_v4 Abasic site processing protein 0.9822 56 180 GO:0003697
GO:0006508
GO:0008233
GO:0016829
GO:0106300
AF-A0A2V9WDH9-F1-model_v4 Abasic site processing protein (EC 3.4.-.-) 0.9821 76 211 GO:0003697
GO:0006508
GO:0008233
GO:0016829
GO:0106300
AF-A0A321L6G3-F1-model_v4 Abasic site processing protein (EC 3.4.-.-) 0.9801 1 233 GO:0003697
GO:0006508
GO:0008233
GO:0016829
GO:0106300

Map