F360293

General Info

Members Datasets Scaffolds Average Seq Length
248 165 241 422

Family's Representative Sequence

Representative Sequence 3300053092|Ga0500583_0000120|Ga0500583_0000120_16643_18073
Length 476
Sequence VHLFIYNIFLILYSFGIRITALWNPKARLWLKGRKNIWVELQGIRDAEGRTAGTRNTKRPIRTPKINGQNAEGEVSNAVPEGGRTQNPEPETQNPKLVWMHCSSLGEFEQGRPVLEAIRQQYPDSRILLTFFSPSGYEVRKNNSGADYVMYLPLDSKANVRKFLNIVQPDLAIWIKYEYWYYYLTELKKRHIPLLLVSGIFRKDQPFFKWYGRLHWYMLESFNHLFVQTPASKQLLGTIGFTNNVSISGDTRFDRVVQIAEQFKPIDVITQFCGDSTVIVAGSTWPEDEEELDHYANTHPEIKFIIAPHEIDEDHLKSIEKLFKYSVRFSKLPLSNSPVPVPRNRPLETEKRPPNTLIIDNIGMLSKLYKYATITYVGGGFGDDGVHNVLEAAVYGKPVVFGPVYEKYVEAVDLEQEGGALVINTALELEETLNELLTDTTFYQVSCQSARNYVYNNKGATEKIMQYIQENRLLTN

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
3 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
6 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
7 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
18 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
28 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
70 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
73 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
78 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
115 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
116 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
117 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
118 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
119 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
120 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
121 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
122 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
126 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
127 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
128 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
129 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
149 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
158 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
159 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
160 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.18
Metatranscriptomes 0
Isolates 2.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.73
Nodule 0
Rhizoplane 0
Rhizosphere 74.19
Stem 0
Stem Tuber 0
Unclassified 10.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10017550 3300003215 Bacteria 2815
2 rootH1_10012273 3300003316 Bacteria 4360
3 rootH1_10162563 3300003316 Bacteria 4356
4 rootH2_10017760 3300003320 Bacteria 10169
5 rootH2_10067129 3300003320 Bacteria 28673
6 rootH2_10098337 3300003320 Bacteria 2169
7 rootH2_10113989 3300003320 Bacteria 3455
8 rootH1_10027127 3300003323 Bacteria 41560
9 rootH1_10043692 3300003323 Bacteria 17024
10 JGI25160J50197_1003289 3300003354 Bacteria 7276
11 JGI25160J50197_1008297 3300003354 Bacteria 3966
12 Ga0055526_1015505 3300003771 Bacteria 3057
13 Ga0055528_1000308 3300003790 Bacteria 41407
14 Ga0055528_1000809 3300003790 Bacteria 21549
15 Ga0055530_10000385 3300003791 Bacteria 39749
16 Ga0065165_1000053 3300005262 Bacteria 189081
17 Ga0065165_1004556 3300005262 Bacteria 8464
18 Ga0065712_10070505 3300005290 Bacteria 5942
19 Ga0070690_100075622 3300005330 Bacteria 2195
20 Ga0070670_100068080 3300005331 Bacteria 3055
21 Ga0068869_100067682 3300005334 Unclassified 2636
22 Ga0070666_10000536 3300005335 Bacteria 22907
23 Ga0070666_10010512 3300005335 Bacteria 5791
24 Ga0068868_100006435 3300005338 Bacteria 8312
25 Ga0068868_100113367 3300005338 Bacteria 2204
26 Ga0070689_100073789 3300005340 Bacteria 2669
27 Ga0070675_100017651 3300005354 Bacteria 5675
28 Ga0070674_100039279 3300005356 Unclassified 3195
29 Ga0070673_100004723 3300005364 Bacteria 8650
30 Ga0070673_100063032 3300005364 Unclassified 2948
31 Ga0070688_100157818 3300005365 Unclassified 1556
32 Ga0070701_10084388 3300005438 Unclassified 1727
33 Ga0070684_100007426 3300005535 Bacteria 8518
34 Ga0068853_100052563 3300005539 Unclassified 3509
35 Ga0070672_100025969 3300005543 Bacteria 4351
36 Ga0070686_100069549 3300005544 Bacteria 2299
37 Ga0070665_100000008 3300005548 Bacteria 606341
38 Ga0068855_100006607 3300005563 Bacteria 14090
39 Ga0068855_100015945 3300005563 Bacteria 9037
40 Ga0070664_100042128 3300005564 Bacteria 3854
41 Ga0068857_100024321 3300005577 Bacteria 5331
42 Ga0068857_100053179 3300005577 Bacteria 3593
43 Ga0068856_100078413 3300005614 Unclassified 3275
44 Ga0068852_100000180 3300005616 Bacteria 43078
45 Ga0068859_100000007 3300005617 Bacteria 390070
46 Ga0068859_100001403 3300005617 Bacteria 24458
47 Ga0068864_100001316 3300005618 Bacteria 20650
48 Ga0068863_100000444 3300005841 Bacteria 41977
49 Ga0068858_100000829 3300005842 Bacteria 32222
50 Ga0068858_100327948 3300005842 Unclassified 1464
51 Ga0068860_100000029 3300005843 Bacteria 259192
52 Ga0068860_100018174 3300005843 Bacteria 6844
53 Ga0068860_100024948 3300005843 Bacteria 5771
54 Ga0068860_100026695 3300005843 Bacteria 5566
55 Ga0081540_1010761 3300005983 Bacteria 6156
56 Ga0075366_10027870 3300006195 Bacteria 3315
57 Ga0097621_100012629 3300006237 Bacteria 6268
58 Ga0097621_100033462 3300006237 Bacteria 4094
59 Ga0068871_100020023 3300006358 Bacteria 5119
60 Ga0097620_100000007 3300006931 Bacteria 390070
61 Ga0097620_100001403 3300006931 Bacteria 24458
62 Ga0105240_10003982 3300009093 Bacteria 22790
63 Ga0105240_10047995 3300009093 Bacteria 5399
64 Ga0105240_10083925 3300009093 Unclassified 3907
65 Ga0105240_10108611 3300009093 Bacteria 3361
66 Ga0105240_10110580 3300009093 Bacteria 3326
67 Ga0105240_10219410 3300009093 Unclassified 2217
68 Ga0111539_10270245 3300009094 Bacteria 1979
69 Ga0111539_10351395 3300009094 Unclassified 1716
70 Ga0105247_10021089 3300009101 Bacteria 3919
71 Ga0114129_10005196 3300009147 Bacteria 18339
72 Ga0105241_10001098 3300009174 Bacteria 20609
73 Ga0105241_10013783 3300009174 Bacteria 5922
74 Ga0105241_10083867 3300009174 Unclassified 2501
75 Ga0105237_10000780 3300009545 Bacteria 43609
76 Ga0105237_10077525 3300009545 Bacteria 3313
77 Ga0105237_10086923 3300009545 Unclassified 3117
78 Ga0105238_10003171 3300009551 Bacteria 16392
79 Ga0105238_10032669 3300009551 Bacteria 5296
80 Ga0105238_10037294 3300009551 Bacteria 4941
81 Ga0105238_10056683 3300009551 Bacteria 3931
82 Ga0105249_10014005 3300009553 Bacteria 7089
83 Ga0105239_10000135 3300010375 Bacteria 103223
84 Ga0105239_10000337 3300010375 Bacteria 68698
85 Ga0105239_10009606 3300010375 Bacteria 10882
86 Ga0105239_10011821 3300010375 Bacteria 9742
87 Ga0105239_10222351 3300010375 Bacteria 2117
88 Ga0105246_10261178 3300011119 Bacteria 1380
89 Ga0157373_10048519 3300013100 Bacteria 3027
90 Ga0157370_10030890 3300013104 Bacteria 5246
91 Ga0157369_10014091 3300013105 Bacteria 9036
92 Ga0157369_10040227 3300013105 Bacteria 5105
93 Ga0157374_10049158 3300013296 Bacteria 3917
94 Ga0157374_10171851 3300013296 Bacteria 2114
95 Ga0157378_10000837 3300013297 Bacteria 28570
96 Ga0163162_10000795 3300013306 Bacteria 29353
97 Ga0163162_10008664 3300013306 Bacteria 9901
98 Ga0163162_10346918 3300013306 Unclassified 1617
99 Ga0157372_10000258 3300013307 Bacteria 58520
100 Ga0157372_10002260 3300013307 Bacteria 20878
101 Ga0157372_10011005 3300013307 Bacteria 9628
102 Ga0157372_10158379 3300013307 Unclassified 2616
103 Ga0157375_10026705 3300013308 Bacteria 5386
104 Ga0157375_10057461 3300013308 Unclassified 3846
105 Ga0157375_10070266 3300013308 Unclassified 3511
106 Ga0157380_10057217 3300014326 Bacteria 3104
107 Ga0157379_10155525 3300014968 Bacteria 2063
108 Ga0182005_1000081 3300015265 Bacteria 73899
109 Ga0209436_100566 3300025208 Bacteria 15905
110 Ga0209258_100041 3300025242 Bacteria 381381
111 Ga0209646_1002181 3300025246 Bacteria 4528
112 Ga0209148_1000090 3300025254 Bacteria 250982
113 Ga0209673_1000034 3300025273 Bacteria 328788
114 Ga0209130_1001027 3300025284 Bacteria 21399
115 Ga0209564_1022953 3300025295 Bacteria 2185
116 Ga0209564_1034363 3300025295 Bacteria 1488
117 Ga0209758_1014477 3300025297 Bacteria 4190
118 Ga0209758_1020661 3300025297 Bacteria 3102
119 Ga0209050_1000353 3300025298 Bacteria 88509
120 Ga0207426_1000177 3300025302 Bacteria 159426
121 Ga0207426_1000592 3300025302 Bacteria 47901
122 Ga0207426_1043531 3300025302 Bacteria 1378
123 Ga0209257_1002086 3300025304 Bacteria 21027
124 Ga0207656_10068605 3300025321 Bacteria 1571
125 Ga0207710_10017175 3300025900 Bacteria 3067
126 Ga0207680_10000067 3300025903 Bacteria 46002
127 Ga0207680_10068723 3300025903 Unclassified 2187
128 Ga0207647_10005595 3300025904 Bacteria 9181
129 Ga0207654_10000661 3300025911 Bacteria 19557
130 Ga0207707_10119442 3300025912 Unclassified 2304
131 Ga0207695_10000445 3300025913 Bacteria 90509
132 Ga0207695_10003973 3300025913 Bacteria 20423
133 Ga0207695_10004873 3300025913 Bacteria 18099
134 Ga0207695_10028507 3300025913 Bacteria 6190
135 Ga0207671_10001466 3300025914 Bacteria 27257
136 Ga0207671_10001776 3300025914 Bacteria 24234
137 Ga0207671_10001778 3300025914 Bacteria 24205
138 Ga0207671_10008365 3300025914 Bacteria 8783
139 Ga0207657_10048087 3300025919 Bacteria 3725
140 Ga0207652_10040645 3300025921 Bacteria 3950
141 Ga0207694_10166257 3300025924 Bacteria 1784
142 Ga0207650_10039104 3300025925 Bacteria 3466
143 Ga0207659_10018400 3300025926 Bacteria 4581
144 Ga0207659_10019887 3300025926 Bacteria 4428
145 Ga0207706_10001156 3300025933 Bacteria 26853
146 Ga0207704_10154052 3300025938 Unclassified 1626
147 Ga0207691_10004566 3300025940 Bacteria 13407
148 Ga0207691_10004949 3300025940 Bacteria 12848
149 Ga0207689_10002959 3300025942 Bacteria 15685
150 Ga0207689_10016883 3300025942 Bacteria 6176
151 Ga0207667_10000100 3300025949 Bacteria 138482
152 Ga0207651_10049868 3300025960 Bacteria 2839
153 Ga0207668_10170590 3300025972 Bacteria 1706
154 Ga0207658_10005017 3300025986 Bacteria 9121
155 Ga0207677_10005993 3300026023 Bacteria 6623
156 Ga0207677_10036911 3300026023 Bacteria 3189
157 Ga0207703_10017680 3300026035 Bacteria 5567
158 Ga0207639_10002436 3300026041 Bacteria 12511
159 Ga0207639_10051314 3300026041 Unclassified 3137
160 Ga0207641_10000090 3300026088 Bacteria 127735
161 Ga0207641_10020789 3300026088 Bacteria 5394
162 Ga0207641_10066455 3300026088 Bacteria 3086
163 Ga0207648_10050695 3300026089 Bacteria 3629
164 Ga0207648_10101139 3300026089 Bacteria 2526
165 Ga0207676_10138053 3300026095 Bacteria 2083
166 Ga0207674_10003443 3300026116 Bacteria 19359
167 Ga0207674_10018575 3300026116 Bacteria 7551
168 Ga0207674_10231179 3300026116 Bacteria 1797
169 Ga0207675_100066296 3300026118 Bacteria 3374
170 Ga0207698_10000108 3300026142 Bacteria 51893
171 Ga0268266_10000016 3300028379 Bacteria 629101
172 Ga0268264_10000072 3300028381 Bacteria 260791
173 Ga0268264_10002720 3300028381 Bacteria 15431
174 Ga0268264_10003011 3300028381 Bacteria 14612
175 Ga0268264_10007515 3300028381 Bacteria 9093
176 Ga0307515_10000078 3300028794 Bacteria 227988
177 Ga0307511_10001896 3300030521 Bacteria 21954
178 Ga0307509_10036817 3300031507 Bacteria 5354
179 Ga0307509_10045284 3300031507 Bacteria 4746
180 Ga0307508_10001912 3300031616 Bacteria 22869
181 Ga0316576_10028682 3300031727 Bacteria 3926
182 Ga0316576_10030421 3300031727 Bacteria 3824
183 Ga0307510_10001712 3300033180 Bacteria 24371
184 Ga0316574_0086885 3300035398 Bacteria 1991
185 Ga0400483_073690 3300039062 Bacteria 14993
186 Ga0400483_233176 3300039062 Bacteria 26214
187 Ga0439436_0006955 3300041404 Bacteria 3479
188 Ga0451855_0376564 3300041511 Unclassified 3783
189 Ga0451577_0025828 3300042876 Bacteria 5326
190 Ga0466972_0000309 3300044658 Bacteria 28496
191 Ga0466972_0008365 3300044658 Bacteria 5184
192 Ga0466972_0051995 3300044658 Bacteria 1975
193 Ga0453683_0012609 3300044673 Bacteria 5536
194 Ga0453683_0062909 3300044673 Unclassified 2320
195 Ga0466965_0031830 3300044683 Bacteria 2574
196 Ga0466966_0000030 3300044684 Bacteria 103300
197 Ga0466961_0034900 3300044693 Bacteria 3230
198 Ga0466971_0009829 3300044719 Bacteria 4177
199 Ga0466957_0011478 3300044842 Bacteria 5113
200 Ga0466959_0000269 3300045049 Bacteria 31896
201 Ga0466959_0002150 3300045049 Bacteria 12505
202 Ga0495638_0017086 3300046460 Bacteria 4846
203 Ga0495606_0004456 3300046507 Bacteria 13980
204 Ga0495648_0011969 3300046524 Bacteria 6504
205 Ga0495611_0000011 3300046648 Bacteria 146643
206 Ga0495611_0013841 3300046648 Bacteria 3440
207 Ga0495625_0064244 3300046660 Bacteria 2590
208 Ga0495687_000004 3300047443 Bacteria 779298
209 Ga0495686_0000165 3300047472 Bacteria 125611
210 Ga0496121_0000030 3300048924 Bacteria 412079
211 Ga0501032_0005352 3300049569 Bacteria 9547
212 Ga0501034_0009826 3300049571 Bacteria 10003
213 Ga0501036_0028950 3300049572 Bacteria 4681
214 Ga0501037_0004568 3300049573 Bacteria 10064
215 Ga0501038_0009375 3300049574 Bacteria 8980
216 Ga0501039_0069294 3300049575 Bacteria 2739
217 Ga0501043_0030975 3300049579 Bacteria 4206
218 Ga0501043_0170219 3300049579 Unclassified 1699
219 Ga0501047_0048805 3300049581 Bacteria 4087
220 Ga0501047_0057440 3300049581 Bacteria 3763
221 Ga0501219_000812 3300049703 Bacteria 4068
222 Ga0501225_0002530 3300049705 Bacteria 5650
223 Ga0501035_0034157 3300049822 Bacteria 4622
224 Ga0501044_0004625 3300049823 Bacteria 15403
225 nmdc:mga0k408_18789_c1 3300050493 Bacteria 3859
226 nmdc:mga05p37_3553_c1 3300050507 Bacteria 18203
227 nmdc:mga08y16_401257_c1 3300050511 Unclassified 1403
228 Ga0500578_0000120 3300053086 Bacteria 95463
229 Ga0500578_0036454 3300053086 Bacteria 3159
230 Ga0500644_0000182 3300053088 Bacteria 40141
231 Ga0500646_0017101 3300053090 Bacteria 1898
232 Ga0500583_0000120 3300053092 Bacteria 37819
233 Ga0500583_0006739 3300053092 Bacteria 3981
234 Ga0500555_032923 3300053103 Bacteria 1463
235 Ga0500569_000517 3300053109 Bacteria 6437
236 Ga0500559_0003554 3300053136 Bacteria 7625
237 Ga0500577_0003098 3300053142 Bacteria 4304
238 Ga0500616_0007492 3300053153 Bacteria 6924
239 Ga0500622_0002131 3300053156 Bacteria 14740
240 Ga0500636_0007397 3300053177 Bacteria 6354
241 Ga0500636_0040858 3300053177 Bacteria 2743

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005290 Ga0065712_10070505 Ga0065712_100705055 345
2 3300009553 Ga0105249_10014005 Ga0105249_100140052 345
3 3300013306 Ga0163162_10346918 Ga0163162_103469181 345
4 3300013308 Ga0157375_10026705 Ga0157375_100267054 355
5 3300049705 Ga0501225_0002530 Ga0501225_0002530_46_1179 364
6 3300013104 Ga0157370_10030890 Ga0157370_100308901 365
7 3300041404 Ga0439436_0006955 Ga0439436_0006955_11_1147 365
8 3300025913 Ga0207695_10000445 Ga0207695_1000044561 366
9 3300044693 Ga0466961_0034900 Ga0466961_0034900_636_1799 374
10 3300044719 Ga0466971_0009829 Ga0466971_0009829_815_1978 374
11 3300045049 Ga0466959_0002150 Ga0466959_0002150_8377_9540 374
12 3300009147 Ga0114129_10005196 Ga0114129_1000519618 377
13 3300050507 nmdc:mga05p37_3553_c1 nmdc:mga05p37_3553_c1_15665_16879 377
14 3300025914 Ga0207671_10001466 Ga0207671_1000146623 381
15 3300005365 Ga0070688_100157818 Ga0070688_1001578182 384
16 3300005544 Ga0070686_100069549 Ga0070686_1000695492 384
17 3300005843 Ga0068860_100018174 Ga0068860_1000181746 384
18 3300006358 Ga0068871_100020023 Ga0068871_1000200232 384
19 3300013306 Ga0163162_10000795 Ga0163162_1000079513 384
20 3300026088 Ga0207641_10066455 Ga0207641_100664553 384
21 3300028381 Ga0268264_10003011 Ga0268264_100030112 384
22 3300048924 Ga0496121_0000030 Ga0496121_0000030_302960_304207 386
23 3300013307 Ga0157372_10002260 Ga0157372_100022602 388
24 3300053103 Ga0500555_032923 Ga0500555_032923_132_1451 390
25 3300049579 Ga0501043_0030975 Ga0501043_0030975_2703_3986 391
26 3300050493 nmdc:mga0k408_18789_c1 nmdc:mga0k408_18789_c1_1941_3320 392
27 3300026089 Ga0207648_10050695 Ga0207648_100506955 395
28 3300005334 Ga0068869_100067682 Ga0068869_1000676822 397
29 3300006195 Ga0075366_10027870 Ga0075366_100278702 397
30 3300013297 Ga0157378_10000837 Ga0157378_1000083712 397
31 3300013308 Ga0157375_10070266 Ga0157375_100702662 397
32 3300014968 Ga0157379_10155525 Ga0157379_101555252 397
33 3300025942 Ga0207689_10016883 Ga0207689_100168833 397
34 3300053090 Ga0500646_0017101 Ga0500646_0017101_344_1567 397
35 3300053109 Ga0500569_000517 Ga0500569_000517_799_2022 397
36 3300053142 Ga0500577_0003098 Ga0500577_0003098_547_1770 397
37 3300053153 Ga0500616_0007492 Ga0500616_0007492_525_1748 397
38 3300005356 Ga0070674_100039279 Ga0070674_1000392793 399
39 3300025940 Ga0207691_10004949 Ga0207691_100049497 399
40 3300026089 Ga0207648_10101139 Ga0207648_101011392 399
41 3300005617 Ga0068859_100001403 Ga0068859_10000140311 401
42 3300006237 Ga0097621_100033462 Ga0097621_1000334625 401
43 3300006931 Ga0097620_100001403 Ga0097620_10000140311 401
44 3300025926 Ga0207659_10019887 Ga0207659_100198872 401
45 3300025940 Ga0207691_10004566 Ga0207691_1000456612 401
46 3300025986 Ga0207658_10005017 Ga0207658_100050177 401
47 3300026023 Ga0207677_10036911 Ga0207677_100369113 401
48 3300026095 Ga0207676_10138053 Ga0207676_101380532 401
49 3300025924 Ga0207694_10166257 Ga0207694_101662572 402
50 3300025903 Ga0207680_10068723 Ga0207680_100687231 403
51 3300026041 Ga0207639_10051314 Ga0207639_100513142 403
52 3300039062 Ga0400483_073690 Ga0400483_073690_3442_4674 403
53 3300039062 Ga0400483_233176 Ga0400483_233176_2432_3664 403
54 3300044673 Ga0453683_0062909 Ga0453683_0062909_1020_2243 403
55 3300044658 Ga0466972_0000309 Ga0466972_0000309_802_2148 404
56 3300009094 Ga0111539_10351395 Ga0111539_103513952 405
57 3300050511 nmdc:mga08y16_401257_c1 nmdc:mga08y16_401257_c1_109_1371 405
58 3300009093 Ga0105240_10003982 Ga0105240_1000398212 406
59 3300009174 Ga0105241_10001098 Ga0105241_1000109812 406
60 3300009551 Ga0105238_10003171 Ga0105238_100031712 406
61 3300013307 Ga0157372_10011005 Ga0157372_100110056 406
62 3300025913 Ga0207695_10003973 Ga0207695_100039738 406
63 3300025914 Ga0207671_10008365 Ga0207671_100083652 406
64 3300035398 Ga0316574_0086885 Ga0316574_0086885_83_1318 406
65 3300041511 Ga0451855_0376564 Ga0451855_0376564_1312_2544 406
66 3300025242 Ga0209258_100041 Ga0209258_10004193 407
67 3300025254 Ga0209148_1000090 Ga0209148_1000090142 407
68 3300031727 Ga0316576_10030421 Ga0316576_100304213 407
69 3300044673 Ga0453683_0012609 Ga0453683_0012609_394_1632 407
70 3300044684 Ga0466966_0000030 Ga0466966_0000030_29998_31275 407
71 3300045049 Ga0466959_0000269 Ga0466959_0000269_5461_6738 407
72 3300053088 Ga0500644_0000182 Ga0500644_0000182_19302_20525 407
73 3300053136 Ga0500559_0003554 Ga0500559_0003554_2172_3395 407
74 3300053177 Ga0500636_0007397 Ga0500636_0007397_1973_3196 407
75 3300031727 Ga0316576_10028682 Ga0316576_100286822 408
76 3300047472 Ga0495686_0000165 Ga0495686_0000165_84103_85491 409
77 3300015265 Ga0182005_1000081 Ga0182005_10000819 410
78 3300031507 Ga0307509_10045284 Ga0307509_100452845 410
79 3300031507 Ga0307509_10036817 Ga0307509_100368173 411
80 3300042876 Ga0451577_0025828 Ga0451577_0025828_1722_3011 411
81 iso_pu_bacteria 2818991442 2819573236 411
82 iso_pu_bacteria 2821136567 2821136656 411
83 iso_pu_bacteria 2904467357 2904468599 411
84 3300031616 Ga0307508_10001912 Ga0307508_1000191214 413
85 iso_pu_bacteria 2738541278 2738731493 414
86 3300005262 Ga0065165_1004556 Ga0065165_10045564 415
87 3300005330 Ga0070690_100075622 Ga0070690_1000756222 415
88 3300005338 Ga0068868_100113367 Ga0068868_1001133671 415
89 3300005354 Ga0070675_100017651 Ga0070675_1000176512 415
90 3300005364 Ga0070673_100004723 Ga0070673_1000047233 415
91 3300005364 Ga0070673_100063032 Ga0070673_1000630323 415
92 3300005438 Ga0070701_10084388 Ga0070701_100843881 415
93 3300005543 Ga0070672_100025969 Ga0070672_1000259692 415
94 3300025938 Ga0207704_10154052 Ga0207704_101540522 415
95 3300026118 Ga0207675_100066296 Ga0207675_1000662962 415
96 3300030521 Ga0307511_10001896 Ga0307511_100018964 415
97 3300046648 Ga0495611_0000011 Ga0495611_0000011_49384_50946 415
98 3300049703 Ga0501219_000812 Ga0501219_000812_81_1337 415
99 3300005563 Ga0068855_100015945 Ga0068855_1000159452 416
100 3300009093 Ga0105240_10108611 Ga0105240_101086112 416
101 3300009093 Ga0105240_10219410 Ga0105240_102194101 416
102 3300010375 Ga0105239_10000135 Ga0105239_1000013518 416
103 3300013296 Ga0157374_10049158 Ga0157374_100491583 416
104 3300033180 Ga0307510_10001712 Ga0307510_1000171213 416
105 3300044658 Ga0466972_0051995 Ga0466972_0051995_235_1593 416
106 3300044842 Ga0466957_0011478 Ga0466957_0011478_2683_4053 416
107 3300046507 Ga0495606_0004456 Ga0495606_0004456_4665_5981 416
108 3300049569 Ga0501032_0005352 Ga0501032_0005352_649_1956 416
109 3300049571 Ga0501034_0009826 Ga0501034_0009826_3033_4340 416
110 3300049572 Ga0501036_0028950 Ga0501036_0028950_2200_3507 416
111 3300049573 Ga0501037_0004568 Ga0501037_0004568_6513_7820 416
112 3300049574 Ga0501038_0009375 Ga0501038_0009375_863_2170 416
113 3300049575 Ga0501039_0069294 Ga0501039_0069294_1213_2520 416
114 3300049579 Ga0501043_0170219 Ga0501043_0170219_62_1369 416
115 3300049581 Ga0501047_0048805 Ga0501047_0048805_2033_3340 416
116 3300049581 Ga0501047_0057440 Ga0501047_0057440_913_2283 416
117 3300049822 Ga0501035_0034157 Ga0501035_0034157_2931_4238 416
118 3300049823 Ga0501044_0004625 Ga0501044_0004625_7185_8492 416
119 3300053086 Ga0500578_0000120 Ga0500578_0000120_20019_21365 416
120 3300053086 Ga0500578_0036454 Ga0500578_0036454_918_2267 416
121 iso_pu_bacteria 2818991460 2819681932 416
122 iso_pu_bacteria 2929177148 2929178512 416
123 iso_pu_bacteria 2946013367 2946019686 416
124 3300003316 rootH1_10162563 rootH1_101625633 417
125 3300003320 rootH2_10098337 rootH2_100983371 417
126 3300005548 Ga0070665_100000008 Ga0070665_100000008353 417
127 3300005563 Ga0068855_100006607 Ga0068855_1000066076 417
128 3300005577 Ga0068857_100053179 Ga0068857_1000531793 417
129 3300009093 Ga0105240_10047995 Ga0105240_100479952 417
130 3300009093 Ga0105240_10110580 Ga0105240_101105802 417
131 3300009094 Ga0111539_10270245 Ga0111539_102702452 417
132 3300009174 Ga0105241_10013783 Ga0105241_100137834 417
133 3300009545 Ga0105237_10077525 Ga0105237_100775252 417
134 3300009551 Ga0105238_10056683 Ga0105238_100566832 417
135 3300010375 Ga0105239_10009606 Ga0105239_100096069 417
136 3300010375 Ga0105239_10222351 Ga0105239_102223512 417
137 3300025913 Ga0207695_10004873 Ga0207695_100048732 417
138 3300025913 Ga0207695_10028507 Ga0207695_100285072 417
139 3300026041 Ga0207639_10002436 Ga0207639_100024369 417
140 3300026116 Ga0207674_10018575 Ga0207674_100185752 417
141 3300028379 Ga0268266_10000016 Ga0268266_10000016351 417
142 3300046660 Ga0495625_0064244 Ga0495625_0064244_196_1524 417
143 3300003316 rootH1_10012273 rootH1_100122733 418
144 3300003320 rootH2_10067129 rootH2_1006712923 418
145 3300003323 rootH1_10027127 rootH1_100271276 418
146 3300005335 Ga0070666_10010512 Ga0070666_100105127 418
147 3300005539 Ga0068853_100052563 Ga0068853_1000525632 418
148 3300005983 Ga0081540_1010761 Ga0081540_10107615 418
149 3300044658 Ga0466972_0008365 Ga0466972_0008365_447_1805 418
150 3300047443 Ga0495687_000004 Ga0495687_000004_482163_483470 418
151 3300053092 Ga0500583_0000120 Ga0500583_0000120_16643_18073 418
152 3300005577 Ga0068857_100024321 Ga0068857_1000243214 419
153 3300005614 Ga0068856_100078413 Ga0068856_1000784132 419
154 3300005616 Ga0068852_100000180 Ga0068852_10000018016 419
155 3300005843 Ga0068860_100000029 Ga0068860_100000029187 419
156 3300005843 Ga0068860_100026695 Ga0068860_1000266955 419
157 3300009093 Ga0105240_10083925 Ga0105240_100839253 419
158 3300009174 Ga0105241_10083867 Ga0105241_100838672 419
159 3300009545 Ga0105237_10086923 Ga0105237_100869232 419
160 3300009551 Ga0105238_10037294 Ga0105238_100372945 419
161 3300010375 Ga0105239_10011821 Ga0105239_100118213 419
162 3300013100 Ga0157373_10048519 Ga0157373_100485191 419
163 3300013105 Ga0157369_10014091 Ga0157369_100140913 419
164 3300013307 Ga0157372_10000258 Ga0157372_1000025826 419
165 3300025904 Ga0207647_10005595 Ga0207647_100055958 419
166 3300025914 Ga0207671_10001778 Ga0207671_100017782 419
167 3300025949 Ga0207667_10000100 Ga0207667_10000100102 419
168 3300026116 Ga0207674_10003443 Ga0207674_1000344316 419
169 3300026142 Ga0207698_10000108 Ga0207698_1000010827 419
170 3300028381 Ga0268264_10000072 Ga0268264_10000072188 419
171 3300028381 Ga0268264_10007515 Ga0268264_100075158 419
172 3300053177 Ga0500636_0040858 Ga0500636_0040858_683_2077 419
173 3300003320 rootH2_10017760 rootH2_100177604 420
174 3300003323 rootH1_10043692 rootH1_100436929 420
175 3300003354 JGI25160J50197_1008297 JGI25160J50197_10082973 420
176 3300009551 Ga0105238_10032669 Ga0105238_100326693 420
177 3300010375 Ga0105239_10000337 Ga0105239_1000033717 420
178 3300013296 Ga0157374_10171851 Ga0157374_101718512 420
179 3300025208 Ga0209436_100566 Ga0209436_1005669 420
180 3300025246 Ga0209646_1002181 Ga0209646_10021813 420
181 3300025284 Ga0209130_1001027 Ga0209130_100102716 420
182 3300025302 Ga0207426_1000177 Ga0207426_1000177116 420
183 3300046460 Ga0495638_0017086 Ga0495638_0017086_533_1852 420
184 3300046524 Ga0495648_0011969 Ga0495648_0011969_4919_6238 420
185 3300046648 Ga0495611_0013841 Ga0495611_0013841_419_1738 420
186 3300053156 Ga0500622_0002131 Ga0500622_0002131_4009_5328 420
187 3300006237 Ga0097621_100012629 Ga0097621_1000126293 421
188 3300053092 Ga0500583_0006739 Ga0500583_0006739_2546_3952 421
189 3300005331 Ga0070670_100068080 Ga0070670_1000680804 422
190 3300005338 Ga0068868_100006435 Ga0068868_1000064354 422
191 3300005535 Ga0070684_100007426 Ga0070684_1000074265 422
192 3300005564 Ga0070664_100042128 Ga0070664_1000421283 422
193 3300005842 Ga0068858_100327948 Ga0068858_1003279481 422
194 3300009545 Ga0105237_10000780 Ga0105237_1000078016 422
195 3300013105 Ga0157369_10040227 Ga0157369_100402272 422
196 3300013307 Ga0157372_10158379 Ga0157372_101583792 422
197 3300014326 Ga0157380_10057217 Ga0157380_100572172 422
198 3300025912 Ga0207707_10119442 Ga0207707_101194422 422
199 3300025919 Ga0207657_10048087 Ga0207657_100480872 422
200 3300025921 Ga0207652_10040645 Ga0207652_100406454 422
201 3300025925 Ga0207650_10039104 Ga0207650_100391042 422
202 3300025926 Ga0207659_10018400 Ga0207659_100184004 422
203 3300025933 Ga0207706_10001156 Ga0207706_100011563 422
204 3300025960 Ga0207651_10049868 Ga0207651_100498682 422
205 3300026023 Ga0207677_10005993 Ga0207677_100059933 422
206 3300026088 Ga0207641_10020789 Ga0207641_100207894 422
207 3300026116 Ga0207674_10231179 Ga0207674_102311791 422
208 3300028794 Ga0307515_10000078 Ga0307515_10000078172 423
209 3300005335 Ga0070666_10000536 Ga0070666_1000053618 424
210 3300005340 Ga0070689_100073789 Ga0070689_1000737893 424
211 3300005617 Ga0068859_100000007 Ga0068859_100000007184 424
212 3300005618 Ga0068864_100001316 Ga0068864_10000131617 424
213 3300005841 Ga0068863_100000444 Ga0068863_1000004444 424
214 3300005842 Ga0068858_100000829 Ga0068858_10000082926 424
215 3300005843 Ga0068860_100024948 Ga0068860_1000249484 424
216 3300006931 Ga0097620_100000007 Ga0097620_100000007185 424
217 3300025321 Ga0207656_10068605 Ga0207656_100686052 424
218 3300025900 Ga0207710_10017175 Ga0207710_100171752 424
219 3300025903 Ga0207680_10000067 Ga0207680_100000673 424
220 3300025911 Ga0207654_10000661 Ga0207654_1000066114 424
221 3300025914 Ga0207671_10001776 Ga0207671_100017764 424
222 3300025942 Ga0207689_10002959 Ga0207689_100029596 424
223 3300025972 Ga0207668_10170590 Ga0207668_101705901 424
224 3300026035 Ga0207703_10017680 Ga0207703_100176804 424
225 3300026088 Ga0207641_10000090 Ga0207641_1000009024 424
226 3300028381 Ga0268264_10002720 Ga0268264_100027207 424
227 3300009101 Ga0105247_10021089 Ga0105247_100210892 425
228 3300011119 Ga0105246_10261178 Ga0105246_102611781 425
229 3300013306 Ga0163162_10008664 Ga0163162_100086646 425
230 3300013308 Ga0157375_10057461 Ga0157375_100574614 425
231 3300003215 JGI25153J46596_10017550 JGI25153J46596_100175503 429
232 3300003320 rootH2_10113989 rootH2_101139893 429
233 3300003354 JGI25160J50197_1003289 JGI25160J50197_10032895 429
234 3300003771 Ga0055526_1015505 Ga0055526_10155052 429
235 3300003790 Ga0055528_1000308 Ga0055528_10003089 429
236 3300003790 Ga0055528_1000809 Ga0055528_100080913 429
237 3300003791 Ga0055530_10000385 Ga0055530_1000038511 429
238 3300005262 Ga0065165_1000053 Ga0065165_100005360 429
239 3300025273 Ga0209673_1000034 Ga0209673_1000034137 429
240 3300025295 Ga0209564_1022953 Ga0209564_10229532 429
241 3300025295 Ga0209564_1034363 Ga0209564_10343631 429
242 3300025297 Ga0209758_1014477 Ga0209758_10144771 429
243 3300025297 Ga0209758_1020661 Ga0209758_10206612 429
244 3300025298 Ga0209050_1000353 Ga0209050_100035363 429
245 3300025302 Ga0207426_1000592 Ga0207426_100059220 429
246 3300025302 Ga0207426_1043531 Ga0207426_10435311 429
247 3300025304 Ga0209257_1002086 Ga0209257_100208623 429
248 3300044683 Ga0466965_0031830 Ga0466965_0031830_164_1453 429

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04413

Glycos_transf_N

3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

80

255

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xci-assembly1.cif.gz_A membrane-embedded monofunctional glycosyltransferase waaa of aquifex aeolicus, substrate-free form 0.7861 43 422
4bfc-assembly1.cif.gz_A crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii 0.7629 209 407
2xci-assembly1.cif.gz_A membrane-embedded monofunctional glycosyltransferase waaa of aquifex aeolicus, substrate-free form 0.7442 43 422
4bfc-assembly1.cif.gz_A crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii 0.7375 209 407
6vlc-assembly1.cif.gz_B crystal structure of udp-glcnac 2-epimerase from neisseria meningitidis bound to udp-glcnac 0.711 53 422
ID Description Score Start End Superfamily
af_P0AC75_41_209_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9136 51 208 3.40.50.11720
af_A0A1D6L6D3_126_238_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9056 51 149 3.40.50.11720
af_A0A0P0VAM2_51_200_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.8984 48 182 3.40.50.11720
af_A0A1D6N6V1_47_223_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.8978 48 208 3.40.50.11720
2xciD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.8794 42 209 3.40.50.11720
ID Description Score Start End GO Terms
AF-A0A3C0IDU3-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9885 4 218 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A836SXN7-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.981 5 269 GO:0005886
GO:0009244
GO:0009245
GO:0016740
AF-A0A519SBQ6-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9808 4 149 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A4Q6AGN0-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9784 1 187 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A519SLN1-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.977 4 134 GO:0005886
GO:0009244
GO:0009245
GO:0016740

Feature Viewer

pLDDT pTM Quality
91.51 0.86 High
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Predicted Structure (AlphaFold2)

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