F359684

General Info

Members Datasets Scaffolds Average Seq Length
248 172 230 441

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100010983|Ga0070694_1000109834
Length 480
Sequence VKPHSLLKATLARLLVLVIGLSFATINYPKTIGPRAQQNRARARSSRIIAATPPMGWNSWDSYSRTLDEQSIKANALWLAHNLKRFGWEYVVVDEGWYLANLDPRGNASQARFQMDEFGRYVPVPARFPSAAKTFSFRPLADHLHSLGLKFGLHIIRGIPREAVTRNLPIAGSNFRAPDAANTSDVCPWNAYNYGLNVSHPAAQSYYDSLAQQYASWGVDFIKIDCIADHPYKGDEIRMFSEAIRKSGRQMVLSLSPGPTDFAKRAEVDKYSQMWRISDDVWDVWYSDKNFPQGVKNQFEKAALWAGAARLGHWPDADMLPLGSLRPAAGWGEPRETRLTHDEQRTLITLWSMFRSPLIMGGNLLRADAWTTSLLTNAEVIAIDQHSKENRPAITTESLVVWTARPESGRDYYVAIFNISDSPQEVRYAFSELGLAAGVYRLRDLWERRKVGAAKKIEVSLPAHACVLYRVSPESGQSIR

Samples

Sample ID Description Type Environment
1 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
2 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
3 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
4 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
5 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
6 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
7 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
8 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
9 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
10 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
11 2851153111 Caulobacter radicis 736 Isolate Unclassified
12 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
13 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
14 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
15 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
16 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
17 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
18 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
19 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
20 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
21 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
22 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
23 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
24 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
25 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
28 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
29 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
30 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
31 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
32 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
33 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
34 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
37 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
38 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
39 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
40 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
44 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
45 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
106 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
107 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
110 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
111 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
112 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
113 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
114 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
115 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
118 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
134 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
142 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
157 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
158 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
159 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
160 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
161 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
162 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
163 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
164 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
165 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
166 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
171 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
172 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.74
Metatranscriptomes 0
Isolates 7.26

Biome Distribution

Category Percentage (%)
Aerial Root 1.21
Bulb 0
Endosphere 29.44
Nodule 0.4
Rhizoplane 0.4
Rhizosphere 57.66
Stem 0
Stem Tuber 0
Unclassified 10.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000822 3300002067 Bacteria 11030
2 JGI24738J21930_10002800 3300002075 Bacteria 4469
3 rootH1_10057737 3300003316 Bacteria 8009
4 JGI25160J50197_1002622 3300003354 Bacteria 8284
5 JGI25161J50226_1001227 3300003374 Bacteria 8321
6 Ga0055526_1001484 3300003771 Bacteria 16652
7 Ga0055537_1001633 3300003773 Bacteria 8403
8 Ga0055537_1001716 3300003773 Bacteria 8098
9 Ga0055524_1000178 3300003775 Bacteria 72273
10 Ga0055524_1001109 3300003775 Bacteria 16274
11 Ga0055524_1014464 3300003775 Bacteria 2923
12 Ga0055536_1000235 3300003781 Bacteria 44441
13 Ga0055534_1000694 3300003784 Bacteria 16651
14 Ga0055530_10000117 3300003791 Bacteria 69120
15 Ga0055530_10000528 3300003791 Bacteria 33195
16 Ga0055530_10004369 3300003791 Bacteria 7325
17 Ga0055531_10000180 3300003794 Bacteria 71821
18 Ga0055531_10002691 3300003794 Bacteria 11703
19 Ga0055531_10003921 3300003794 Bacteria 9267
20 Ga0065165_1004279 3300005262 Bacteria 9008
21 Ga0065165_1015434 3300005262 Bacteria 2913
22 Ga0070676_10048072 3300005328 Bacteria 2494
23 Ga0070670_100016821 3300005331 Bacteria 6277
24 Ga0070660_100001042 3300005339 Bacteria 18628
25 Ga0070660_100201067 3300005339 Bacteria 1616
26 Ga0070668_100167886 3300005347 Bacteria 1785
27 Ga0070671_100018108 3300005355 Bacteria 5719
28 Ga0070674_100063758 3300005356 Bacteria 2580
29 Ga0070674_100113513 3300005356 Bacteria 1993
30 Ga0070673_100083844 3300005364 Bacteria 2590
31 Ga0070694_100010983 3300005444 Bacteria 5602
32 Ga0070694_100145455 3300005444 Bacteria 1726
33 Ga0070708_100116076 3300005445 Bacteria 2465
34 Ga0070663_100025244 3300005455 Bacteria 4010
35 Ga0070663_100211674 3300005455 Bacteria 1518
36 Ga0070662_100030243 3300005457 Bacteria 3787
37 Ga0070662_100223834 3300005457 Bacteria 1502
38 Ga0070706_100003500 3300005467 Bacteria 15428
39 Ga0070699_100032652 3300005518 Unclassified 4495
40 Ga0070697_100000021 3300005536 Bacteria 138216
41 Ga0068853_100012272 3300005539 Bacteria 6967
42 Ga0068853_100024129 3300005539 Bacteria 5097
43 Ga0070665_100047054 3300005548 Bacteria 4330
44 Ga0068855_100287106 3300005563 Bacteria 1825
45 Ga0070664_100072025 3300005564 Bacteria 2963
46 Ga0070664_100175573 3300005564 Bacteria 1902
47 Ga0068854_100001269 3300005578 Bacteria 15164
48 Ga0068854_100070437 3300005578 Bacteria 2556
49 Ga0068854_100115233 3300005578 Bacteria 2033
50 Ga0068856_100127962 3300005614 Bacteria 2543
51 Ga0068852_100066077 3300005616 Bacteria 3157
52 Ga0068852_100107986 3300005616 Bacteria 2525
53 Ga0068864_100154948 3300005618 Bacteria 2079
54 Ga0068861_100000017 3300005719 Bacteria 78362
55 Ga0068851_10017230 3300005834 Bacteria 3467
56 Ga0068851_10039194 3300005834 Bacteria 2379
57 Ga0068863_100120466 3300005841 Unclassified 2501
58 Ga0075364_10103434 3300006051 Bacteria 1897
59 Ga0075366_10032326 3300006195 Bacteria 3080
60 Ga0075366_10062013 3300006195 Bacteria 2223
61 Ga0097621_100004750 3300006237 Bacteria 9501
62 Ga0068871_100007721 3300006358 Bacteria 7700
63 Ga0068871_100054917 3300006358 Bacteria 3233
64 Ga0068865_100003451 3300006881 Bacteria 9465
65 Ga0099826_10080525 3300006948 Bacteria 2030
66 Ga0105243_10066022 3300009148 Unclassified 2909
67 Ga0105241_10078050 3300009174 Bacteria 2587
68 Ga0105248_10000006 3300009177 Bacteria 595060
69 Ga0105248_10033482 3300009177 Bacteria 5741
70 Ga0105237_10178551 3300009545 Bacteria 2123
71 Ga0105239_10023599 3300010375 Bacteria 6773
72 Ga0105239_10029979 3300010375 Bacteria 5984
73 Ga0105239_10073883 3300010375 Bacteria 3749
74 Ga0157378_10017416 3300013297 Bacteria 6306
75 Ga0183365_10001 3300015684 Bacteria 2090444
76 Ga0163161_10132603 3300017792 Bacteria 1881
77 Ga0213875_10000090 3300021388 Bacteria 105400
78 Ga0209436_100073 3300025208 Bacteria 50582
79 Ga0207425_1000033 3300025245 Bacteria 245540
80 Ga0207425_1011954 3300025245 Bacteria 2053
81 Ga0209129_1003074 3300025258 Bacteria 7533
82 Ga0209565_1000030 3300025263 Bacteria 325058
83 Ga0209565_1001192 3300025263 Bacteria 12386
84 Ga0209565_1001353 3300025263 Bacteria 11080
85 Ga0209130_1001516 3300025284 Bacteria 14939
86 Ga0209130_1004047 3300025284 Bacteria 5809
87 Ga0209675_1001727 3300025291 Bacteria 12034
88 Ga0209676_1000230 3300025292 Bacteria 121783
89 Ga0209564_1003396 3300025295 Bacteria 10963
90 Ga0209758_1025714 3300025297 Bacteria 2572
91 Ga0209050_1000011 3300025298 Bacteria 914037
92 Ga0209050_1000131 3300025298 Bacteria 186028
93 Ga0209050_1000233 3300025298 Bacteria 121806
94 Ga0209050_1000441 3300025298 Bacteria 75474
95 Ga0209050_1002829 3300025298 Bacteria 13812
96 Ga0209256_1000046 3300025299 Bacteria 325040
97 Ga0209256_1000962 3300025299 Bacteria 34745
98 Ga0209256_1004558 3300025299 Bacteria 8600
99 Ga0207426_1006119 3300025302 Bacteria 5302
100 Ga0209051_1001592 3300025303 Bacteria 18620
101 Ga0209257_1000003 3300025304 Bacteria 1702593
102 Ga0209257_1000028 3300025304 Bacteria 699493
103 Ga0209257_1000740 3300025304 Bacteria 49424
104 Ga0209257_1006240 3300025304 Bacteria 7803
105 Ga0209257_1006508 3300025304 Bacteria 7483
106 Ga0209257_1009572 3300025304 Bacteria 5145
107 Ga0207656_10006193 3300025321 Bacteria 4286
108 Ga0207645_10003658 3300025907 Bacteria 11602
109 Ga0207705_10000506 3300025909 Bacteria 33121
110 Ga0207654_10027834 3300025911 Bacteria 3076
111 Ga0207671_10150389 3300025914 Bacteria 1798
112 Ga0207657_10015275 3300025919 Bacteria 7444
113 Ga0207657_10197956 3300025919 Bacteria 1617
114 Ga0207650_10128002 3300025925 Bacteria 1984
115 Ga0207644_10028109 3300025931 Bacteria 3889
116 Ga0207706_10047749 3300025933 Bacteria 3787
117 Ga0207706_10049281 3300025933 Bacteria 3723
118 Ga0207669_10152752 3300025937 Bacteria 1619
119 Ga0207711_10169104 3300025941 Bacteria 1983
120 Ga0207651_10046503 3300025960 Bacteria 2919
121 Ga0207640_10000592 3300025981 Bacteria 21587
122 Ga0207639_10043959 3300026041 Bacteria 3357
123 Ga0207639_10052881 3300026041 Bacteria 3097
124 Ga0207678_10005633 3300026067 Bacteria 11195
125 Ga0207702_10020748 3300026078 Bacteria 5434
126 Ga0207648_10057753 3300026089 Bacteria 3385
127 Ga0207675_100000462 3300026118 Bacteria 39560
128 Ga0207698_10041704 3300026142 Bacteria 3423
129 Ga0268266_10034745 3300028379 Bacteria 4288
130 Ga0307517_10001822 3300028786 Bacteria 34985
131 Ga0307515_10056969 3300028794 Bacteria 5665
132 Ga0265340_10028128 3300031247 Bacteria 2830
133 Ga0395905_0106563 3300037471 Bacteria 2632
134 Ga0436364_0309018 3300037853 Bacteria 153512
135 Ga0439465_0010220 3300041413 Bacteria 2950
136 Ga0439455_0007308 3300042012 Bacteria 2333
137 Ga0439458_0000790 3300042157 Bacteria 8114
138 Ga0495617_013913 3300046452 Bacteria 2736
139 Ga0495627_000108 3300046453 Bacteria 102455
140 Ga0495590_0003540 3300046457 Bacteria 6365
141 Ga0495650_0000435 3300046471 Bacteria 67227
142 Ga0495650_0000782 3300046471 Bacteria 39029
143 Ga0495584_0065366 3300046491 Bacteria 1829
144 Ga0495584_0079345 3300046491 Bacteria 1651
145 Ga0495583_0000702 3300046506 Bacteria 43137
146 Ga0495583_0002971 3300046506 Bacteria 13610
147 Ga0495610_0000615 3300046512 Bacteria 35218
148 Ga0495610_0008091 3300046512 Bacteria 6879
149 Ga0495616_0000039 3300046513 Bacteria 123105
150 Ga0495631_0002611 3300046518 Bacteria 10065
151 Ga0495631_0005766 3300046518 Bacteria 6462
152 Ga0495632_0000798 3300046519 Bacteria 28011
153 Ga0495632_0001544 3300046519 Bacteria 19016
154 Ga0495637_0004018 3300046520 Bacteria 7679
155 Ga0495643_0000047 3300046522 Bacteria 217914
156 Ga0495643_0004206 3300046522 Bacteria 10194
157 Ga0495643_0009851 3300046522 Bacteria 5910
158 Ga0495648_0000021 3300046524 Bacteria 246945
159 Ga0495663_0000009 3300046525 Bacteria 256308
160 Ga0495663_0000218 3300046525 Bacteria 22905
161 Ga0495642_0037463 3300046528 Bacteria 1962
162 Ga0495633_0000290 3300046558 Bacteria 57790
163 Ga0495633_0000494 3300046558 Bacteria 39797
164 Ga0495633_0003563 3300046558 Bacteria 10295
165 Ga0495633_0005398 3300046558 Bacteria 7832
166 Ga0495633_0009107 3300046558 Bacteria 5513
167 Ga0495668_0004427 3300046616 Bacteria 9981
168 Ga0495668_0011648 3300046616 Bacteria 5256
169 Ga0495611_0013285 3300046648 Bacteria 3503
170 Ga0495625_0018906 3300046660 Bacteria 5363
171 Ga0495625_0028927 3300046660 Bacteria 4149
172 Ga0495625_0063371 3300046660 Bacteria 2610
173 Ga0495669_0000058 3300046684 Bacteria 76033
174 Ga0495671_0000028 3300046692 Bacteria 234938
175 Ga0495671_0000038 3300046692 Bacteria 173693
176 Ga0495660_0004407 3300046810 Bacteria 8525
177 Ga0495683_0001990 3300047323 Bacteria 12720
178 Ga0495683_0046810 3300047323 Bacteria 2171
179 Ga0495687_000152 3300047443 Bacteria 105602
180 Ga0495679_004556 3300047446 Bacteria 6338
181 Ga0495673_0000058 3300047469 Bacteria 235044
182 Ga0495673_0000108 3300047469 Bacteria 168459
183 Ga0495681_0000012 3300047470 Bacteria 200275
184 Ga0495681_0000103 3300047470 Bacteria 75088
185 Ga0495681_0006429 3300047470 Bacteria 7727
186 Ga0495681_0018262 3300047470 Bacteria 3867
187 Ga0495686_0000258 3300047472 Bacteria 94953
188 Ga0495686_0044725 3300047472 Bacteria 2803
189 Ga0495615_0000063 3300048090 Bacteria 33860
190 Ga0495626_0000717 3300048091 Bacteria 31095
191 Ga0496116_0000017 3300048919 Bacteria 554463
192 Ga0496117_0009410 3300048920 Bacteria 9095
193 Ga0496118_0017277 3300048921 Bacteria 6579
194 Ga0496121_0000675 3300048924 Bacteria 63670
195 Ga0496122_0014148 3300048925 Bacteria 7736
196 Ga0496122_0044386 3300048925 Bacteria 3469
197 Ga0496123_0001779 3300048926 Bacteria 28398
198 Ga0496123_0002736 3300048926 Bacteria 21137
199 Ga0496124_0000690 3300048927 Bacteria 55368
200 Ga0496124_0016242 3300048927 Bacteria 7092
201 Ga0496124_0031719 3300048927 Bacteria 4675
202 Ga0496125_0022135 3300048928 Bacteria 5908
203 Ga0496125_0046250 3300048928 Bacteria 3653
204 Ga0496125_0145757 3300048928 Bacteria 1637
205 Ga0496126_0000962 3300048929 Bacteria 49354
206 Ga0496126_0037918 3300048929 Bacteria 4489
207 Ga0495678_001243 3300049459 Bacteria 20734
208 nmdc:mga0k408_10339_c1 3300050493 Bacteria 5047
209 nmdc:mga06z11_22699_c1 3300050494 Bacteria 2935
210 nmdc:mga07m45_54583_c1 3300050496 Bacteria 2071
211 Ga0500610_0000155 3300053079 Bacteria 20465
212 Ga0500635_0000799 3300053080 Bacteria 7796
213 Ga0500578_0000005 3300053086 Bacteria 243789
214 Ga0500644_0002371 3300053088 Bacteria 4732
215 Ga0500641_0003669 3300053096 Bacteria 5420
216 Ga0500562_000471 3300053108 Bacteria 9746
217 Ga0500594_0000041 3300053118 Bacteria 42069
218 Ga0500608_000047 3300053122 Bacteria 55485
219 Ga0500608_000145 3300053122 Bacteria 29351
220 Ga0500618_000071 3300053125 Bacteria 85596
221 Ga0500642_0000971 3300053130 Bacteria 8240
222 Ga0500658_0002487 3300053134 Bacteria 7130
223 Ga0500559_0006748 3300053136 Bacteria 5157
224 Ga0500559_0010301 3300053136 Bacteria 4019
225 Ga0500559_0011013 3300053136 Bacteria 3872
226 Ga0500604_0000507 3300053151 Bacteria 10780
227 Ga0500622_0000153 3300053156 Bacteria 72168
228 Ga0500622_0006804 3300053156 Bacteria 6576
229 Ga0500645_000019 3300053730 Bacteria 135445
230 Ga0500609_001237 3300053731 Bacteria 3803

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003316 rootH1_10057737 rootH1_100577373 381
2 3300009545 Ga0105237_10178551 Ga0105237_101785511 404
3 3300005467 Ga0070706_100003500 Ga0070706_10000350012 411
4 3300005518 Ga0070699_100032652 Ga0070699_1000326523 411
5 3300005536 Ga0070697_100000021 Ga0070697_10000002114 411
6 3300005841 Ga0068863_100120466 Ga0068863_1001204661 412
7 3300053730 Ga0500645_000019 Ga0500645_000019_21671_23017 413
8 3300005455 Ga0070663_100211674 Ga0070663_1002116741 414
9 3300005564 Ga0070664_100175573 Ga0070664_1001755732 414
10 3300005614 Ga0068856_100127962 Ga0068856_1001279623 414
11 3300005616 Ga0068852_100066077 Ga0068852_1000660773 414
12 3300006358 Ga0068871_100054917 Ga0068871_1000549172 414
13 3300010375 Ga0105239_10023599 Ga0105239_100235993 414
14 3300005328 Ga0070676_10048072 Ga0070676_100480722 415
15 3300005347 Ga0070668_100167886 Ga0070668_1001678862 415
16 3300005356 Ga0070674_100113513 Ga0070674_1001135132 415
17 3300005364 Ga0070673_100083844 Ga0070673_1000838442 415
18 3300006881 Ga0068865_100003451 Ga0068865_1000034512 415
19 3300025907 Ga0207645_10003658 Ga0207645_100036589 415
20 3300025960 Ga0207651_10046503 Ga0207651_100465032 415
21 3300026089 Ga0207648_10057753 Ga0207648_100577532 415
22 3300028786 Ga0307517_10001822 Ga0307517_1000182219 416
23 3300041413 Ga0439465_0010220 Ga0439465_0010220_1160_2410 416
24 3300046471 Ga0495650_0000435 Ga0495650_0000435_19298_20656 416
25 3300046506 Ga0495583_0000702 Ga0495583_0000702_16554_17912 416
26 3300046558 Ga0495633_0009107 Ga0495633_0009107_3277_4635 416
27 3300005834 Ga0068851_10017230 Ga0068851_100172304 417
28 3300046518 Ga0495631_0002611 Ga0495631_0002611_2294_3652 417
29 3300046558 Ga0495633_0000494 Ga0495633_0000494_29780_31138 417
30 3300046660 Ga0495625_0028927 Ga0495625_0028927_2117_3475 417
31 3300048929 Ga0496126_0037918 Ga0496126_0037918_1434_2687 417
32 3300053151 Ga0500604_0000507 Ga0500604_0000507_3394_4647 417
33 3300003791 Ga0055530_10000117 Ga0055530_1000011746 418
34 3300003794 Ga0055531_10000180 Ga0055531_1000018047 418
35 3300005356 Ga0070674_100063758 Ga0070674_1000637582 418
36 3300005548 Ga0070665_100047054 Ga0070665_1000470543 418
37 3300025298 Ga0209050_1000131 Ga0209050_100013178 418
38 3300025304 Ga0209257_1000028 Ga0209257_1000028444 418
39 3300025937 Ga0207669_10152752 Ga0207669_101527522 418
40 3300028379 Ga0268266_10034745 Ga0268266_100347454 418
41 3300005339 Ga0070660_100201067 Ga0070660_1002010671 420
42 3300005539 Ga0068853_100024129 Ga0068853_1000241295 420
43 3300005578 Ga0068854_100070437 Ga0068854_1000704373 420
44 3300005616 Ga0068852_100107986 Ga0068852_1001079862 420
45 3300010375 Ga0105239_10073883 Ga0105239_100738832 420
46 3300025321 Ga0207656_10006193 Ga0207656_100061935 420
47 3300025919 Ga0207657_10197956 Ga0207657_101979562 420
48 3300026142 Ga0207698_10041704 Ga0207698_100417043 420
49 3300037853 Ga0436364_0309018 Ga0436364_0309018_38631_39944 421
50 3300046810 Ga0495660_0004407 Ga0495660_0004407_759_2117 424
51 3300005262 Ga0065165_1004279 Ga0065165_10042793 425
52 3300026041 Ga0207639_10043959 Ga0207639_100439592 427
53 3300048090 Ga0495615_0000063 Ga0495615_0000063_9622_10911 427
54 3300048925 Ga0496122_0014148 Ga0496122_0014148_6341_7630 427
55 3300048926 Ga0496123_0001779 Ga0496123_0001779_26604_27893 427
56 3300048927 Ga0496124_0016242 Ga0496124_0016242_369_1658 427
57 3300021388 Ga0213875_10000090 Ga0213875_1000009060 428
58 3300048924 Ga0496121_0000675 Ga0496121_0000675_9531_10904 429
59 3300048927 Ga0496124_0031719 Ga0496124_0031719_674_2047 429
60 3300006948 Ga0099826_10080525 Ga0099826_100805252 430
61 3300025298 Ga0209050_1000441 Ga0209050_100044155 430
62 3300046616 Ga0495668_0004427 Ga0495668_0004427_1187_2539 430
63 3300053136 Ga0500559_0011013 Ga0500559_0011013_909_2261 430
64 3300003771 Ga0055526_1001484 Ga0055526_10014847 431
65 3300003773 Ga0055537_1001716 Ga0055537_10017165 431
66 3300003775 Ga0055524_1001109 Ga0055524_10011095 431
67 3300003784 Ga0055534_1000694 Ga0055534_10006947 431
68 3300003791 Ga0055530_10004369 Ga0055530_100043694 431
69 3300003794 Ga0055531_10002691 Ga0055531_100026916 431
70 3300025245 Ga0207425_1000033 Ga0207425_1000033108 431
71 3300025258 Ga0209129_1003074 Ga0209129_10030744 431
72 3300025298 Ga0209050_1000011 Ga0209050_1000011377 431
73 3300025304 Ga0209257_1000003 Ga0209257_10000031149 431
74 3300025304 Ga0209257_1009572 Ga0209257_10095723 431
75 3300003773 Ga0055537_1001633 Ga0055537_10016333 432
76 3300003775 Ga0055524_1000178 Ga0055524_10001786 432
77 3300003794 Ga0055531_10003921 Ga0055531_100039214 432
78 3300025245 Ga0207425_1011954 Ga0207425_10119542 432
79 3300025263 Ga0209565_1000030 Ga0209565_1000030120 432
80 3300025297 Ga0209758_1025714 Ga0209758_10257142 432
81 3300025299 Ga0209256_1000046 Ga0209256_1000046165 432
82 3300025304 Ga0209257_1006240 Ga0209257_10062402 432
83 3300053086 Ga0500578_0000005 Ga0500578_0000005_124980_126326 432
84 3300053136 Ga0500559_0010301 Ga0500559_0010301_2261_3619 432
85 3300046491 Ga0495584_0065366 Ga0495584_0065366_145_1491 433
86 3300046518 Ga0495631_0005766 Ga0495631_0005766_4210_5556 433
87 3300046648 Ga0495611_0013285 Ga0495611_0013285_1917_3263 433
88 3300046684 Ga0495669_0000058 Ga0495669_0000058_14807_16153 433
89 3300047443 Ga0495687_000152 Ga0495687_000152_60814_62160 433
90 3300053079 Ga0500610_0000155 Ga0500610_0000155_7942_9288 433
91 3300053122 Ga0500608_000145 Ga0500608_000145_11628_12959 433
92 3300005355 Ga0070671_100018108 Ga0070671_1000181083 434
93 3300005564 Ga0070664_100072025 Ga0070664_1000720252 434
94 3300025931 Ga0207644_10028109 Ga0207644_100281093 434
95 3300048091 Ga0495626_0000717 Ga0495626_0000717_16597_17994 434
96 3300049459 Ga0495678_001243 Ga0495678_001243_14046_15404 434
97 3300053080 Ga0500635_0000799 Ga0500635_0000799_4954_6306 434
98 3300053118 Ga0500594_0000041 Ga0500594_0000041_21423_22781 434
99 3300003781 Ga0055536_1000235 Ga0055536_10002353 435
100 3300003791 Ga0055530_10000528 Ga0055530_100005283 435
101 3300025292 Ga0209676_1000230 Ga0209676_1000230101 435
102 3300025298 Ga0209050_1000233 Ga0209050_1000233101 435
103 3300025303 Ga0209051_1001592 Ga0209051_10015924 435
104 3300025304 Ga0209257_1006508 Ga0209257_10065083 435
105 3300053136 Ga0500559_0006748 Ga0500559_0006748_3047_4363 437
106 iso_pu_bacteria 2830075706 2830076976 437
107 iso_pu_bacteria 8054302542 8054302761 437
108 3300003354 JGI25160J50197_1002622 JGI25160J50197_10026222 438
109 3300003374 JGI25161J50226_1001227 JGI25161J50226_10012276 438
110 3300025208 Ga0209436_100073 Ga0209436_10007321 438
111 3300025263 Ga0209565_1001192 Ga0209565_10011923 438
112 3300025263 Ga0209565_1001353 Ga0209565_10013536 438
113 3300025284 Ga0209130_1001516 Ga0209130_10015166 438
114 3300025284 Ga0209130_1004047 Ga0209130_10040473 438
115 3300025291 Ga0209675_1001727 Ga0209675_10017277 438
116 3300025295 Ga0209564_1003396 Ga0209564_10033963 438
117 3300025299 Ga0209256_1004558 Ga0209256_10045584 438
118 3300025302 Ga0207426_1006119 Ga0207426_10061193 438
119 3300031247 Ga0265340_10028128 Ga0265340_100281282 438
120 3300046452 Ga0495617_013913 Ga0495617_013913_36_1397 438
121 3300046453 Ga0495627_000108 Ga0495627_000108_36487_37848 438
122 3300046512 Ga0495610_0000615 Ga0495610_0000615_14377_15738 438
123 3300047470 Ga0495681_0000103 Ga0495681_0000103_13089_14450 438
124 3300053134 Ga0500658_0002487 Ga0500658_0002487_818_2149 438
125 3300009177 Ga0105248_10000006 Ga0105248_1000000641 439
126 3300017792 Ga0163161_10132603 Ga0163161_101326032 439
127 3300025304 Ga0209257_1000740 Ga0209257_100074023 439
128 3300042012 Ga0439455_0007308 Ga0439455_0007308_850_2223 439
129 3300048919 Ga0496116_0000017 Ga0496116_0000017_326024_327406 439
130 3300048920 Ga0496117_0009410 Ga0496117_0009410_41_1423 439
131 3300048921 Ga0496118_0017277 Ga0496118_0017277_2032_3414 439
132 3300048925 Ga0496122_0044386 Ga0496122_0044386_1622_3004 439
133 3300048926 Ga0496123_0002736 Ga0496123_0002736_6070_7452 439
134 3300048927 Ga0496124_0000690 Ga0496124_0000690_2060_3442 439
135 3300048928 Ga0496125_0022135 Ga0496125_0022135_283_1665 439
136 3300048928 Ga0496125_0145757 Ga0496125_0145757_61_1389 439
137 3300046471 Ga0495650_0000782 Ga0495650_0000782_8264_9592 440
138 3300046519 Ga0495632_0000798 Ga0495632_0000798_22139_23506 440
139 3300047470 Ga0495681_0000012 Ga0495681_0000012_131861_133189 440
140 3300047470 Ga0495681_0018262 Ga0495681_0018262_35_1393 440
141 3300005444 Ga0070694_100145455 Ga0070694_1001454551 442
142 3300005563 Ga0068855_100287106 Ga0068855_1002871062 442
143 3300005578 Ga0068854_100115233 Ga0068854_1001152332 442
144 3300006195 Ga0075366_10032326 Ga0075366_100323263 442
145 3300025914 Ga0207671_10150389 Ga0207671_101503891 442
146 3300026078 Ga0207702_10020748 Ga0207702_100207482 442
147 3300050496 nmdc:mga07m45_54583_c1 nmdc:mga07m45_54583_c1_374_1723 442
148 iso_pu_bacteria 2739367756 2739792333 442
149 iso_pu_bacteria 2751185897 2753766621 442
150 3300005331 Ga0070670_100016821 Ga0070670_1000168212 443
151 3300009174 Ga0105241_10078050 Ga0105241_100780502 443
152 3300010375 Ga0105239_10029979 Ga0105239_100299793 443
153 3300025925 Ga0207650_10128002 Ga0207650_101280021 443
154 3300037471 Ga0395905_0106563 Ga0395905_0106563_256_1602 443
155 iso_pu_bacteria 2512564014 2512643967 443
156 iso_pu_bacteria 2599185354 2600203066 443
157 3300005445 Ga0070708_100116076 Ga0070708_1001160762 444
158 3300005455 Ga0070663_100025244 Ga0070663_1000252443 444
159 3300005539 Ga0068853_100012272 Ga0068853_1000122722 444
160 3300005578 Ga0068854_100001269 Ga0068854_10000126912 444
161 3300005834 Ga0068851_10039194 Ga0068851_100391942 444
162 3300006237 Ga0097621_100004750 Ga0097621_1000047505 444
163 3300006358 Ga0068871_100007721 Ga0068871_1000077215 444
164 3300015684 Ga0183365_10001 Ga0183365_100011678 444
165 3300025911 Ga0207654_10027834 Ga0207654_100278341 444
166 3300025981 Ga0207640_10000592 Ga0207640_100005922 444
167 3300026041 Ga0207639_10052881 Ga0207639_100528812 444
168 3300026067 Ga0207678_10005633 Ga0207678_100056336 444
169 3300046491 Ga0495584_0079345 Ga0495584_0079345_162_1508 444
170 3300046522 Ga0495643_0009851 Ga0495643_0009851_1083_2429 444
171 3300046528 Ga0495642_0037463 Ga0495642_0037463_161_1507 444
172 3300050493 nmdc:mga0k408_10339_c1 nmdc:mga0k408_10339_c1_2010_3359 444
173 3300053108 Ga0500562_000471 Ga0500562_000471_7774_9114 444
174 3300053122 Ga0500608_000047 Ga0500608_000047_10044_11384 444
175 3300053156 Ga0500622_0006804 Ga0500622_0006804_3960_5297 444
176 iso_pu_bacteria 2582581280 2585155584 444
177 iso_pu_bacteria 2582581293 2585199427 444
178 iso_pu_bacteria 2791355048 2792460891 444
179 iso_pu_bacteria 2843744320 2843745449 444
180 iso_pu_bacteria 2851153111 2851157099 444
181 iso_pu_bacteria 2898329390 2898332755 444
182 iso_pu_bacteria 2928531327 2928531601 444
183 iso_pu_bacteria 2984555340 2984555522 444
184 3300003775 Ga0055524_1014464 Ga0055524_10144642 445
185 3300025299 Ga0209256_1000962 Ga0209256_10009622 445
186 3300028794 Ga0307515_10056969 Ga0307515_100569694 445
187 3300046457 Ga0495590_0003540 Ga0495590_0003540_3482_4828 445
188 3300046512 Ga0495610_0008091 Ga0495610_0008091_4731_6101 445
189 3300046520 Ga0495637_0004018 Ga0495637_0004018_6249_7601 445
190 3300046522 Ga0495643_0000047 Ga0495643_0000047_105393_106745 445
191 3300046525 Ga0495663_0000009 Ga0495663_0000009_182445_183797 445
192 3300046558 Ga0495633_0000290 Ga0495633_0000290_48867_50219 445
193 3300046558 Ga0495633_0003563 Ga0495633_0003563_2330_3682 445
194 3300046692 Ga0495671_0000038 Ga0495671_0000038_66949_68301 445
195 3300047446 Ga0495679_004556 Ga0495679_004556_1835_3205 445
196 3300047470 Ga0495681_0006429 Ga0495681_0006429_6365_7717 445
197 3300047472 Ga0495686_0000258 Ga0495686_0000258_1272_2618 445
198 3300047472 Ga0495686_0044725 Ga0495686_0044725_51_1421 445
199 3300053088 Ga0500644_0002371 Ga0500644_0002371_38_1384 445
200 3300053125 Ga0500618_000071 Ga0500618_000071_73265_74635 445
201 3300053156 Ga0500622_0000153 Ga0500622_0000153_26918_28264 445
202 iso_pu_bacteria 2510917021 2511126352 445
203 iso_pu_bacteria 2928027323 2928028678 445
204 iso_pu_bacteria 2984564862 2984566366 445
205 iso_pu_bacteria 2993356040 2993357380 445
206 3300046513 Ga0495616_0000039 Ga0495616_0000039_111249_112607 446
207 3300046519 Ga0495632_0001544 Ga0495632_0001544_14697_16055 446
208 3300046616 Ga0495668_0011648 Ga0495668_0011648_3389_4747 446
209 3300047323 Ga0495683_0046810 Ga0495683_0046810_98_1456 446
210 3300053731 Ga0500609_001237 Ga0500609_001237_2073_3431 446
211 3300005457 Ga0070662_100223834 Ga0070662_1002238341 448
212 3300005719 Ga0068861_100000017 Ga0068861_10000001770 448
213 3300009148 Ga0105243_10066022 Ga0105243_100660222 448
214 3300009177 Ga0105248_10033482 Ga0105248_100334822 448
215 3300025933 Ga0207706_10049281 Ga0207706_100492812 448
216 3300025941 Ga0207711_10169104 Ga0207711_101691041 448
217 3300026118 Ga0207675_100000462 Ga0207675_10000046216 448
218 3300046506 Ga0495583_0002971 Ga0495583_0002971_554_1912 448
219 3300046525 Ga0495663_0000218 Ga0495663_0000218_12170_13528 448
220 3300046660 Ga0495625_0063371 Ga0495625_0063371_963_2321 448
221 3300047323 Ga0495683_0001990 Ga0495683_0001990_4027_5385 448
222 3300047469 Ga0495673_0000108 Ga0495673_0000108_98527_99879 448
223 3300053130 Ga0500642_0000971 Ga0500642_0000971_5654_7012 448
224 3300005262 Ga0065165_1015434 Ga0065165_10154341 449
225 3300013297 Ga0157378_10017416 Ga0157378_100174162 449
226 3300025298 Ga0209050_1002829 Ga0209050_10028294 449
227 3300046522 Ga0495643_0004206 Ga0495643_0004206_8450_9814 449
228 3300046660 Ga0495625_0018906 Ga0495625_0018906_1702_3066 449
229 3300048928 Ga0496125_0046250 Ga0496125_0046250_1384_2739 449
230 3300048929 Ga0496126_0000962 Ga0496126_0000962_32287_33642 449
231 3300050494 nmdc:mga06z11_22699_c1 nmdc:mga06z11_22699_c1_729_2078 449
232 3300005339 Ga0070660_100001042 Ga0070660_10000104214 450
233 3300025909 Ga0207705_10000506 Ga0207705_1000050615 450
234 3300025919 Ga0207657_10015275 Ga0207657_100152752 450
235 3300042157 Ga0439458_0000790 Ga0439458_0000790_4409_5761 450
236 3300053096 Ga0500641_0003669 Ga0500641_0003669_3468_4847 450
237 3300005618 Ga0068864_100154948 Ga0068864_1001549482 451
238 3300046524 Ga0495648_0000021 Ga0495648_0000021_107964_109346 451
239 3300046558 Ga0495633_0005398 Ga0495633_0005398_1108_2490 451
240 3300046692 Ga0495671_0000028 Ga0495671_0000028_137483_138865 451
241 3300047469 Ga0495673_0000058 Ga0495673_0000058_96126_97508 451
242 3300005444 Ga0070694_100010983 Ga0070694_1000109834 452
243 3300005457 Ga0070662_100030243 Ga0070662_1000302432 452
244 3300006195 Ga0075366_10062013 Ga0075366_100620132 452
245 3300025933 Ga0207706_10047749 Ga0207706_100477492 452
246 3300006051 Ga0075364_10103434 Ga0075364_101034341 455
247 3300002067 JGI24735J21928_10000822 JGI24735J21928_100008227 458
248 3300002075 JGI24738J21930_10002800 JGI24738J21930_100028003 458

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17801

Melibiase_C

Alpha galactosidase C-terminal beta sandwich domain

396

471

0.88

PF16499

Melibiase_2

Alpha galactosidase A

192

386

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nzf-assembly1.cif.gz_A crystal structure of abp-d197a (a gh27-b-l-arabinopyranosidase from geobacillus stearothermophilus), in complex with arabinose 0.9711 37 452
4nx0-assembly1.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9614 37 456
4nzf-assembly1.cif.gz_A crystal structure of abp-d197a (a gh27-b-l-arabinopyranosidase from geobacillus stearothermophilus), in complex with arabinose 0.9358 37 452
4nx0-assembly1.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9267 37 456
6f4c-assembly1.cif.gz_B nicotiana benthamiana alpha-galactosidase 0.8983 37 454
ID Description Score Start End Superfamily
af_K7M508_28_384_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9335 38 362 3.20.20.70
af_A0A0R0FT50_59_332_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9203 37 362 3.20.20.70
af_A0A0R0FT50_59_332_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8946 37 362 3.20.20.70
af_A0A0R0L8J4_2_222_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.893 159 361 3.20.20.70
af_A0A1D6KS92_108_259_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8862 206 361 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A520J8Y4-F1-model_v4 Glycoside hydrolase family 27 protein 0.9909 43 450 GO:0004553
GO:0005576
GO:0005975
AF-A0A087NH17-F1-model_v4 Alpha-galactosidase 0.9905 43 449 GO:0004553
GO:0005576
GO:0005975
AF-A0A519I0H6-F1-model_v4 Glycoside hydrolase family 27 protein 0.9888 37 449 GO:0004553
GO:0005576
GO:0005975
AF-A0A520J8Y4-F1-model_v4 Glycoside hydrolase family 27 protein 0.9885 43 450 GO:0004553
GO:0005576
GO:0005975
AF-A0A4R2P382-F1-model_v4 Alpha-galactosidase (EC 3.2.1.22) (Melibiase) 0.9883 151 450 GO:0004557
GO:0005576
GO:0005975

Feature Viewer

pLDDT pTM Quality
88.68 0.88 High
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Predicted Structure (AlphaFold2)

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