F359485

General Info

Members Datasets Scaffolds Average Seq Length
247 151 494 291

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954691527|2954700334
Length 327
Sequence SSARAHRPLVQPASEWDGEMKALAACEAAWRKAVRTMTLPLVVGVDGSDASLLAVDWAVDEAARRDVPLRLIYASLWERYEGALPSTGRKRPSEQVLAEHIVASAAERAARRDAAVKVSTDIVSAEAADALLRAGNNAFALVTGARGRGELQGLLLGSVGLAVAARAHCPVVVVRGDNASLAGTHERILLGAGDPATGGEAVRFAFDEAAVRGCALDAVRAWRCPAHEGADHPALADEPMHQHEEQASAQLDELMREAMAEHPDVRVRRTTVEGPARRILVNRSAAADLVIIGARRRQGHFGLQLGRVSHTLLHHAHCPVAVVPQLV

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
5 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
6 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
7 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
8 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
9 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
10 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
11 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
12 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
13 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
14 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
15 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
16 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
17 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
18 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
19 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
20 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
21 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
22 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
23 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
24 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
25 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
26 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
27 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
28 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
29 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
30 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
31 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
32 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
33 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
34 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
35 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
36 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
39 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
40 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
41 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
42 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
43 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
44 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
45 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
46 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
47 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
48 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
49 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
50 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
51 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
56 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
57 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
58 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
59 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
60 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
61 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
62 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
63 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
64 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
65 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
66 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
67 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
68 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
72 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
73 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
74 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
75 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
76 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
77 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
82 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
83 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
84 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
89 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
104 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
105 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
106 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
107 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
108 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
109 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
110 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
111 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
112 2643221647 Streptomyces sp. Root369 Isolate Unclassified
113 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
114 2643221714 Streptomyces sp. Root264 Isolate Unclassified
115 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
116 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
117 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
118 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
119 2808606448 Streptomyces sp. 193411 Isolate Unclassified
120 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
121 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
122 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
123 2862574272 Streptomyces sp. AcE210 Isolate Nodule
124 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
125 2867428634 Streptomyces sp. RP5T Isolate Unclassified
126 2867475112 Streptomyces sp. TM32 Isolate Unclassified
127 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
128 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
129 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
130 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
131 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
132 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
133 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
134 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
135 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
136 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
137 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
138 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
139 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
140 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
141 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
142 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
143 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
144 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
145 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
146 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
147 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
148 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
149 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
150 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
151 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.52
Metatranscriptomes 0.4
Isolates 23.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.05
Nodule 0.4
Rhizoplane 0.81
Rhizosphere 77.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10022847 3300003323 Bacteria 16725
2 Ga0006562J51391_1125027 3300003578 Bacteria 2270
3 Ga0081455_10081529 3300005937 Bacteria 2649
4 Ga0075365_10133219 3300006038 Bacteria 1721
5 Ga0182008_10005073 3300014497 Bacteria 7565
6 Ga0182007_10001930 3300015262 Bacteria 10727
7 Ga0183367_1012 3300015688 Bacteria 347438
8 Ga0209758_1010697 3300025297 Bacteria 5446
9 Ga0207426_1000748 3300025302 Bacteria 36575
10 Ga0209371_1007584 3300027312 Bacteria 3751
11 Ga0209813_10004709 3300027866 Bacteria 3269
12 Ga0307515_10000683 3300028794 Bacteria 78103
13 Ga0307515_10204486 3300028794 Bacteria 1840
14 Ga0268256_1007417 3300030500 Bacteria 3918
15 Ga0307511_10000869 3300030521 Bacteria 32211
16 Ga0307511_10049614 3300030521 Bacteria 3393
17 Ga0307512_10002064 3300030522 Bacteria 26392
18 Ga0307509_10032739 3300031507 Bacteria 5727
19 Ga0307509_10080814 3300031507 Bacteria 3360
20 Ga0307508_10037960 3300031616 Bacteria 4331
21 Ga0307508_10198752 3300031616 Bacteria 1605
22 Ga0307514_10022384 3300031649 Bacteria 5138
23 Ga0307514_10060160 3300031649 Bacteria 2899
24 Ga0307507_10045075 3300033179 Bacteria 4346
25 Ga0307507_10164806 3300033179 Bacteria 1627
26 Ga0307510_10006076 3300033180 Bacteria 14392
27 Ga0307510_10031956 3300033180 Bacteria 5937
28 Ga0307510_10129365 3300033180 Bacteria 2203
29 Ga0395898_0008827 3300037466 Bacteria 10623
30 Ga0395898_0029977 3300037466 Bacteria 5446
31 Ga0451837_1155772 3300041494 Bacteria 2365
32 Ga0451853_0181679 3300041512 Bacteria 2748
33 Ga0451853_1128814 3300041512 Bacteria 1377
34 Ga0451853_1348885 3300041512 Bacteria 1242
35 Ga0451853_2887686 3300041512 Bacteria 1155
36 Ga0439448_0015299 3300042005 Bacteria 2322
37 Ga0439457_030155 3300042014 Bacteria 1202
38 Ga0450895_003049 3300042132 Bacteria 1279
39 Ga0450896_004083 3300042133 Bacteria 1968
40 Ga0450898_004467 3300042134 Bacteria 2070
41 Ga0450899_008689 3300042135 Bacteria 1113
42 Ga0450902_011740 3300042137 Bacteria 1395
43 Ga0450903_000341 3300042138 Bacteria 10267
44 Ga0450903_000820 3300042138 Bacteria 6053
45 Ga0450906_000641 3300042145 Bacteria 7465
46 Ga0439458_0001976 3300042157 Bacteria 5087
47 Ga0439458_0042417 3300042157 Bacteria 1108
48 Ga0495617_002539 3300046452 Bacteria 7205
49 Ga0495592_0020494 3300046454 Bacteria 5029
50 Ga0495603_0000018 3300046455 Bacteria 65755
51 Ga0495603_0000591 3300046455 Bacteria 20377
52 Ga0495603_0003509 3300046455 Bacteria 9330
53 Ga0495603_0018348 3300046455 Bacteria 4232
54 Ga0495603_0033877 3300046455 Bacteria 3072
55 Ga0495629_0001131 3300046459 Bacteria 21102
56 Ga0495629_0010103 3300046459 Bacteria 6885
57 Ga0495629_0021562 3300046459 Bacteria 4597
58 Ga0495629_0087933 3300046459 Bacteria 2168
59 Ga0495629_0183898 3300046459 Bacteria 1448
60 Ga0495651_0007168 3300046462 Bacteria 8522
61 Ga0495653_0320357 3300046463 Bacteria 1005
62 Ga0495580_0125245 3300046472 Bacteria 1783
63 Ga0495582_0041296 3300046473 Bacteria 2542
64 Ga0495639_0030996 3300046475 Bacteria 2378
65 Ga0495662_0010405 3300046476 Bacteria 4557
66 Ga0495662_0035943 3300046476 Bacteria 2391
67 Ga0495662_0103983 3300046476 Bacteria 1389
68 Ga0495664_0000080 3300046477 Bacteria 47313
69 Ga0495664_0078710 3300046477 Bacteria 1975
70 Ga0495585_0002629 3300046492 Bacteria 12648
71 Ga0495594_0002172 3300046499 Bacteria 10211
72 Ga0495594_0004773 3300046499 Bacteria 6980
73 Ga0495594_0043448 3300046499 Bacteria 2463
74 Ga0495594_0110883 3300046499 Bacteria 1547
75 Ga0495583_0014378 3300046506 Bacteria 4371
76 Ga0495618_0149762 3300046514 Bacteria 1491
77 Ga0495618_0348664 3300046514 Bacteria 913
78 Ga0495620_0016105 3300046515 Bacteria 3762
79 Ga0495628_0031221 3300046516 Bacteria 4309
80 Ga0495628_0053819 3300046516 Bacteria 3174
81 Ga0495630_0028342 3300046517 Bacteria 4162
82 Ga0495643_0017216 3300046522 Bacteria 4229
83 Ga0495666_0015444 3300046526 Bacteria 3801
84 Ga0495666_0043735 3300046526 Bacteria 2163
85 Ga0495652_0019350 3300046529 Bacteria 6065
86 Ga0495652_0082368 3300046529 Bacteria 2652
87 Ga0495640_0001159 3300046533 Bacteria 20639
88 Ga0495587_0000196 3300046536 Bacteria 44727
89 Ga0495645_0027167 3300046543 Bacteria 4157
90 Ga0495645_0107114 3300046543 Bacteria 1981
91 Ga0495622_0001900 3300046557 Bacteria 10277
92 Ga0495622_0005797 3300046557 Bacteria 5732
93 Ga0495622_0040674 3300046557 Bacteria 2163
94 Ga0495667_0149494 3300046559 Bacteria 1504
95 Ga0495634_0007397 3300046642 Bacteria 8259
96 Ga0495634_0068630 3300046642 Bacteria 2341
97 Ga0495611_0147089 3300046648 Bacteria 1100
98 Ga0495625_0008892 3300046660 Bacteria 8493
99 Ga0495625_0206849 3300046660 Bacteria 1292
100 Ga0495635_0000275 3300046663 Bacteria 33061
101 Ga0495635_0287292 3300046663 Bacteria 1104
102 Ga0495588_0037655 3300046674 Bacteria 2458
103 Ga0495588_0044957 3300046674 Bacteria 2262
104 Ga0495657_0000646 3300046675 Bacteria 31644
105 Ga0495657_0003159 3300046675 Bacteria 13581
106 Ga0495657_0004869 3300046675 Bacteria 10690
107 Ga0495657_0008727 3300046675 Bacteria 7737
108 Ga0495657_0069534 3300046675 Bacteria 2303
109 Ga0495657_0215539 3300046675 Bacteria 1165
110 Ga0495623_0071011 3300046679 Bacteria 2168
111 Ga0495646_0011772 3300046680 Bacteria 5562
112 Ga0495658_0005482 3300046683 Bacteria 6236
113 Ga0495613_0001012 3300046689 Bacteria 21374
114 Ga0495613_0002837 3300046689 Bacteria 12997
115 Ga0495613_0009552 3300046689 Bacteria 7203
116 Ga0495613_0021478 3300046689 Bacteria 4810
117 Ga0495613_0024169 3300046689 Bacteria 4528
118 Ga0495613_0088520 3300046689 Bacteria 2243
119 Ga0495624_0059012 3300046690 Bacteria 2408
120 Ga0495649_0031826 3300046694 Bacteria 2908
121 Ga0495649_0054091 3300046694 Bacteria 2172
122 Ga0495589_0003938 3300046794 Bacteria 7969
123 Ga0495589_0014748 3300046794 Bacteria 4021
124 Ga0495589_0021048 3300046794 Bacteria 3333
125 Ga0495600_0007133 3300046809 Bacteria 6824
126 Ga0495660_0020415 3300046810 Bacteria 3798
127 Ga0495660_0026360 3300046810 Bacteria 3296
128 Ga0495581_0003161 3300047315 Bacteria 9433
129 Ga0495581_0072186 3300047315 Bacteria 1997
130 Ga0495604_0010371 3300047317 Bacteria 7380
131 Ga0495636_0000236 3300047318 Bacteria 21900
132 Ga0495636_0009454 3300047318 Bacteria 3841
133 Ga0495636_0010068 3300047318 Bacteria 3730
134 Ga0495674_0025935 3300047319 Bacteria 5365
135 Ga0495674_0079975 3300047319 Bacteria 2806
136 Ga0495676_0000364 3300047321 Bacteria 37208
137 Ga0495676_0001567 3300047321 Bacteria 19835
138 Ga0495676_0003304 3300047321 Bacteria 14576
139 Ga0495676_0013496 3300047321 Bacteria 7342
140 Ga0495676_0120695 3300047321 Bacteria 1907
141 Ga0495680_0082217 3300047322 Bacteria 2430
142 Ga0495683_0000997 3300047323 Bacteria 19774
143 Ga0495687_003722 3300047443 Bacteria 10818
144 Ga0495687_007869 3300047443 Bacteria 6199
145 Ga0495687_028965 3300047443 Bacteria 2568
146 Ga0495687_092057 3300047443 Bacteria 1158
147 Ga0495675_0014194 3300047444 Bacteria 5037
148 Ga0495675_0140504 3300047444 Bacteria 1497
149 Ga0495685_000829 3300047447 Bacteria 9424
150 Ga0495685_008336 3300047447 Bacteria 3440
151 Ga0495685_008664 3300047447 Bacteria 3384
152 Ga0495685_010165 3300047447 Bacteria 3154
153 Ga0495685_011202 3300047447 Bacteria 3021
154 Ga0495685_019276 3300047447 Bacteria 2344
155 Ga0495685_025049 3300047447 Bacteria 2053
156 Ga0495685_055780 3300047447 Bacteria 1336
157 Ga0495685_063939 3300047447 Bacteria 1238
158 Ga0495684_0104558 3300047471 Bacteria 2140
159 Ga0495684_0235172 3300047471 Bacteria 1339
160 Ga0495593_0001503 3300047673 Bacteria 13704
161 Ga0495593_0011122 3300047673 Bacteria 5177
162 Ga0495602_0024293 3300048088 Bacteria 5882
163 Ga0495614_0000107 3300048089 Bacteria 28466
164 Ga0495614_0003054 3300048089 Bacteria 7461
165 Ga0495614_0082284 3300048089 Bacteria 1395
166 Ga0495614_0151910 3300048089 Bacteria 1033
167 Ga0495626_0105349 3300048091 Bacteria 1226
168 Ga0496109_0068566 3300048912 Bacteria 3251
169 Ga0501033_0001250 3300049570 Bacteria 22764
170 Ga0501034_0002302 3300049571 Bacteria 23386
171 Ga0501034_0010623 3300049571 Bacteria 9580
172 Ga0501036_0004419 3300049572 Bacteria 11351
173 Ga0501036_0006156 3300049572 Bacteria 9733
174 Ga0501038_0000522 3300049574 Bacteria 33756
175 Ga0501038_0310133 3300049574 Bacteria 1237
176 Ga0501039_0003046 3300049575 Bacteria 12539
177 Ga0501043_0000604 3300049579 Bacteria 31726
178 Ga0501046_0133638 3300049580 Bacteria 1880
179 Ga0501047_0128573 3300049581 Bacteria 2413
180 Ga0501070_0001030 3300049586 Bacteria 25055
181 Ga0501074_0002915 3300049590 Bacteria 12005
182 Ga0501035_0003903 3300049822 Bacteria 14218
183 Ga0501035_0035591 3300049822 Bacteria 4518
184 Ga0501044_0084318 3300049823 Bacteria 3212
185 nmdc:mga0yw44_49023_c1 3300050492 Bacteria 2547
186 nmdc:mga06z11_4434_c1 3300050494 Bacteria 5525
187 nmdc:mga06z11_7135_c1 3300050494 Bacteria 4588
188 Ga0500583_0155064 3300053092 Bacteria 1140
189 Ga0500560_000561 3300053107 Bacteria 5331
190 Ga0500624_001632 3300053157 Bacteria 3393
191 2954700334 2954691527 Bacteria 10720516
192 2547410747 2547132111 Bacteria 8013147
193 2547412929 2547132111 Bacteria 8013147
194 2585303041 2582581313 Bacteria 10042643
195 2616699569 2616644814 Bacteria 11555299
196 2616699587 2616644814 Bacteria 11555299
197 2644267806 2643221647 Bacteria 10741251
198 2644440469 2643221678 Bacteria 9540101
199 2644627870 2643221714 Bacteria 9015452
200 2785373547 2784746768 Bacteria 10036182
201 2786667417 2786546132 Bacteria 10419719
202 2786667480 2786546132 Bacteria 10419719
203 2808845948 2808606359 Bacteria 9866990
204 2808917614 2808606375 Bacteria 9466072
205 2809235715 2808606448 Bacteria 8656184
206 2809235741 2808606448 Bacteria 8656184
207 2812361377 2811994879 Bacteria 9313447
208 2812361489 2811994879 Bacteria 9313447
209 2852641793 2852635781 Bacteria 8251373
210 2862282167 2862281513 Bacteria 9621493
211 2862575550 2862574272 Bacteria 10567477
212 2863410943 2863404153 Bacteria 9672205
213 2867431039 2867428634 Bacteria 9590268
214 2867433261 2867428634 Bacteria 9590268
215 2867475192 2867475112 Bacteria 6909112
216 2912715717 2912715099 Bacteria 9460473
217 2912723592 2912715099 Bacteria 9460473
218 2912727006 2912723979 Bacteria 8557534
219 2919470740 2919468124 Bacteria 9133025
220 2919470771 2919468124 Bacteria 9133025
221 2946064675 2946064051 Bacteria 8957905
222 2954010767 2954002825 Bacteria 9173742
223 2954389853 2954380949 Bacteria 10050426
224 2954673570 2954673503 Bacteria 9685905
225 2954673620 2954673503 Bacteria 9685905
226 2954690370 2954682443 Bacteria 9862841
227 2954690420 2954682443 Bacteria 9862841
228 2954700779 2954691527 Bacteria 10720516
229 2954701898 2954701450 Bacteria 10834262
230 2954706568 2954701450 Bacteria 10834262
231 2954712642 2954711539 Bacteria 10867210
232 2954722599 2954721474 Bacteria 10456478
233 2954739261 2954731030 Bacteria 10243860
234 2954741478 2954740390 Bacteria 10229294
235 2954758089 2954749733 Bacteria 10366972
236 2954760492 2954759201 Bacteria 9358192
237 2966604649 2966598605 Bacteria 7676064
238 3006394500 3006393351 Bacteria 6615579
239 3006498518 3006493962 Bacteria 8825450
240 8008581727 8008574985 Bacteria 7815457
241 8023623846 8023623736 Bacteria 8593882
242 8023623886 8023623736 Bacteria 8593882
243 8047901103 8047893842 Bacteria 11723082
244 8048133815 8048127548 Bacteria 11053136
245 8048357798 8048356638 Bacteria 11044339
246 8048378042 8048369669 Bacteria 11666822
247 8048387140 8048379754 Bacteria 11877923
248 rootH1_10022847
249 Ga0006562J51391_1125027
250 Ga0081455_10081529
251 Ga0075365_10133219
252 Ga0182008_10005073
253 Ga0182007_10001930
254 Ga0183367_1012
255 Ga0209758_1010697
256 Ga0207426_1000748
257 Ga0209371_1007584
258 Ga0209813_10004709
259 Ga0307515_10000683
260 Ga0307515_10204486
261 Ga0268256_1007417
262 Ga0307511_10000869
263 Ga0307511_10049614
264 Ga0307512_10002064
265 Ga0307509_10032739
266 Ga0307509_10080814
267 Ga0307508_10037960
268 Ga0307508_10198752
269 Ga0307514_10022384
270 Ga0307514_10060160
271 Ga0307507_10045075
272 Ga0307507_10164806
273 Ga0307510_10006076
274 Ga0307510_10031956
275 Ga0307510_10129365
276 Ga0395898_0008827
277 Ga0395898_0029977
278 Ga0451837_1155772
279 Ga0451853_0181679
280 Ga0451853_1128814
281 Ga0451853_1348885
282 Ga0451853_2887686
283 Ga0439448_0015299
284 Ga0439457_030155
285 Ga0450895_003049
286 Ga0450896_004083
287 Ga0450898_004467
288 Ga0450899_008689
289 Ga0450902_011740
290 Ga0450903_000341
291 Ga0450903_000820
292 Ga0450906_000641
293 Ga0439458_0001976
294 Ga0439458_0042417
295 Ga0495617_002539
296 Ga0495592_0020494
297 Ga0495603_0000018
298 Ga0495603_0000591
299 Ga0495603_0003509
300 Ga0495603_0018348
301 Ga0495603_0033877
302 Ga0495629_0001131
303 Ga0495629_0010103
304 Ga0495629_0021562
305 Ga0495629_0087933
306 Ga0495629_0183898
307 Ga0495651_0007168
308 Ga0495653_0320357
309 Ga0495580_0125245
310 Ga0495582_0041296
311 Ga0495639_0030996
312 Ga0495662_0010405
313 Ga0495662_0035943
314 Ga0495662_0103983
315 Ga0495664_0000080
316 Ga0495664_0078710
317 Ga0495585_0002629
318 Ga0495594_0002172
319 Ga0495594_0004773
320 Ga0495594_0043448
321 Ga0495594_0110883
322 Ga0495583_0014378
323 Ga0495618_0149762
324 Ga0495618_0348664
325 Ga0495620_0016105
326 Ga0495628_0031221
327 Ga0495628_0053819
328 Ga0495630_0028342
329 Ga0495643_0017216
330 Ga0495666_0015444
331 Ga0495666_0043735
332 Ga0495652_0019350
333 Ga0495652_0082368
334 Ga0495640_0001159
335 Ga0495587_0000196
336 Ga0495645_0027167
337 Ga0495645_0107114
338 Ga0495622_0001900
339 Ga0495622_0005797
340 Ga0495622_0040674
341 Ga0495667_0149494
342 Ga0495634_0007397
343 Ga0495634_0068630
344 Ga0495611_0147089
345 Ga0495625_0008892
346 Ga0495625_0206849
347 Ga0495635_0000275
348 Ga0495635_0287292
349 Ga0495588_0037655
350 Ga0495588_0044957
351 Ga0495657_0000646
352 Ga0495657_0003159
353 Ga0495657_0004869
354 Ga0495657_0008727
355 Ga0495657_0069534
356 Ga0495657_0215539
357 Ga0495623_0071011
358 Ga0495646_0011772
359 Ga0495658_0005482
360 Ga0495613_0001012
361 Ga0495613_0002837
362 Ga0495613_0009552
363 Ga0495613_0021478
364 Ga0495613_0024169
365 Ga0495613_0088520
366 Ga0495624_0059012
367 Ga0495649_0031826
368 Ga0495649_0054091
369 Ga0495589_0003938
370 Ga0495589_0014748
371 Ga0495589_0021048
372 Ga0495600_0007133
373 Ga0495660_0020415
374 Ga0495660_0026360
375 Ga0495581_0003161
376 Ga0495581_0072186
377 Ga0495604_0010371
378 Ga0495636_0000236
379 Ga0495636_0009454
380 Ga0495636_0010068
381 Ga0495674_0025935
382 Ga0495674_0079975
383 Ga0495676_0000364
384 Ga0495676_0001567
385 Ga0495676_0003304
386 Ga0495676_0013496
387 Ga0495676_0120695
388 Ga0495680_0082217
389 Ga0495683_0000997
390 Ga0495687_003722
391 Ga0495687_007869
392 Ga0495687_028965
393 Ga0495687_092057
394 Ga0495675_0014194
395 Ga0495675_0140504
396 Ga0495685_000829
397 Ga0495685_008336
398 Ga0495685_008664
399 Ga0495685_010165
400 Ga0495685_011202
401 Ga0495685_019276
402 Ga0495685_025049
403 Ga0495685_055780
404 Ga0495685_063939
405 Ga0495684_0104558
406 Ga0495684_0235172
407 Ga0495593_0001503
408 Ga0495593_0011122
409 Ga0495602_0024293
410 Ga0495614_0000107
411 Ga0495614_0003054
412 Ga0495614_0082284
413 Ga0495614_0151910
414 Ga0495626_0105349
415 Ga0496109_0068566
416 Ga0501033_0001250
417 Ga0501034_0002302
418 Ga0501034_0010623
419 Ga0501036_0004419
420 Ga0501036_0006156
421 Ga0501038_0000522
422 Ga0501038_0310133
423 Ga0501039_0003046
424 Ga0501043_0000604
425 Ga0501046_0133638
426 Ga0501047_0128573
427 Ga0501070_0001030
428 Ga0501074_0002915
429 Ga0501035_0003903
430 Ga0501035_0035591
431 Ga0501044_0084318
432 nmdc:mga0yw44_49023_c1
433 nmdc:mga06z11_4434_c1
434 nmdc:mga06z11_7135_c1
435 Ga0500583_0155064
436 Ga0500560_000561
437 Ga0500624_001632
438 2954700334
439 2547410747
440 2547412929
441 2585303041
442 2616699569
443 2616699587
444 2644267806
445 2644440469
446 2644627870
447 2785373547
448 2786667417
449 2786667480
450 2808845948
451 2808917614
452 2809235715
453 2809235741
454 2812361377
455 2812361489
456 2852641793
457 2862282167
458 2862575550
459 2863410943
460 2867431039
461 2867433261
462 2867475192
463 2912715717
464 2912723592
465 2912727006
466 2919470740
467 2919470771
468 2946064675
469 2954010767
470 2954389853
471 2954673570
472 2954673620
473 2954690370
474 2954690420
475 2954700779
476 2954701898
477 2954706568
478 2954712642
479 2954722599
480 2954739261
481 2954741478
482 2954758089
483 2954760492
484 2966604649
485 3006394500
486 3006498518
487 8008581727
488 8023623846
489 8023623886
490 8047901103
491 8048133815
492 8048357798
493 8048378042
494 8048387140

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

184

324

0.96

PF00582

Usp

Universal stress protein family

37

175

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qtb-assembly1.cif.gz_A structure of the universal stress protein from archaeoglobus fulgidus in complex with damp 0.8463 3 142
2jax-assembly1.cif.gz_A-2 universal stress protein rv2623 from mycobaterium tuberculosis 0.835 3 290
6hcd-assembly2.cif.gz_D structure of universal stress protein from archaeoglobus fulgidus 0.8345 1 142
6hcd-assembly1.cif.gz_A structure of universal stress protein from archaeoglobus fulgidus 0.8304 1 142
2jax-assembly1.cif.gz_A-2 universal stress protein rv2623 from mycobaterium tuberculosis 0.8264 3 290
ID Description Score Start End Superfamily
af_Q556D4_2_158_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8709 154 292 3.40.50.620
af_P9WFD5_3_145_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8598 1 140 3.40.50.620
af_P9WLN1_2_148_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8469 2 140 3.40.50.620
3qtbA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8368 3 142 3.40.50.620
af_Q2FXL6_6_143_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8324 5 142 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A4R1DM57-F1-model_v4 deleted 0.94 90 294
AF-A0A3A9WD85-F1-model_v4 Universal stress protein 0.9352 2 293
AF-A0A7K2RYM2-F1-model_v4 deleted 0.9188 1 292
AF-A0A3A9WD85-F1-model_v4 Universal stress protein 0.9161 2 293
AF-A0A7K2RYM2-F1-model_v4 deleted 0.9127 1 292

Map