F356384

General Info

Members Datasets Scaffolds Average Seq Length
244 140 488 245

Family's Representative Sequence

Representative Sequence 3300006358|Ga0068871_100002616|Ga0068871_1000026163
Length 287
Sequence MVGVFKCVHREKTDQAYGEISREDVTVTSGLIVSLVTAIALTQVATFSTTIYLHRCATHRALTLHPAMAWLFRFALWITTGLATKEWVAVHRKHHAFTDEEGDPHSPRLYGLWPVQLGNVFYYVREARNPATVEKYAHDITVDRWDRLLFNHGLVGPVVGTVALCALIGVGWGVLAAGLHGVIYVFFLSSSINGLCHTRGYRTFDNTATNIPWLALLTGGEGLHNNHHGFPRSPKFSVRSDEFDPSWTIIQLLTRLRLARPYQTIEQIDEGRQARLSARHPEKATGR

Samples

Sample ID Description Type Environment
1 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
91 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
95 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
102 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
117 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0.41
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.87
Nodule 0
Rhizoplane 4.51
Rhizosphere 92.62
Stem 0
Stem Tuber 0
Unclassified 12.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068871_100002616 3300006358 Bacteria 12292
2 Ga0070676_10078379 3300005328 Unclassified 1999
3 Ga0070666_10185556 3300005335 Bacteria 1460
4 Ga0068868_100093631 3300005338 Bacteria 2423
5 Ga0068868_100509491 3300005338 Bacteria 1055
6 Ga0070687_100405247 3300005343 Bacteria 895
7 Ga0070668_100181610 3300005347 Bacteria 1719
8 Ga0070675_100000301 3300005354 Bacteria 33216
9 Ga0070675_100000520 3300005354 Bacteria 26280
10 Ga0070675_100509045 3300005354 Bacteria 1085
11 Ga0070671_100008102 3300005355 Bacteria 8415
12 Ga0070673_100014110 3300005364 Bacteria 5552
13 Ga0070673_100377562 3300005364 Bacteria 1263
14 Ga0070688_100057623 3300005365 Bacteria 2443
15 Ga0070667_100016501 3300005367 Bacteria 6112
16 Ga0070708_100025970 3300005445 Bacteria 5009
17 Ga0070678_100494871 3300005456 Bacteria 1078
18 Ga0068867_100053064 3300005459 Bacteria 2993
19 Ga0068867_100083688 3300005459 Bacteria 2409
20 Ga0068867_100148786 3300005459 Bacteria 1837
21 Ga0070685_10191059 3300005466 Unclassified 1325
22 Ga0070685_10455595 3300005466 Unclassified 897
23 Ga0070707_100157451 3300005468 Bacteria 2213
24 Ga0070707_100609753 3300005468 Bacteria 1054
25 Ga0070699_100005305 3300005518 Bacteria 11306
26 Ga0070699_100241427 3300005518 Bacteria 1613
27 Ga0070697_100353829 3300005536 Bacteria 1269
28 Ga0070686_100134697 3300005544 Bacteria 1713
29 Ga0070665_100010025 3300005548 Bacteria 9584
30 Ga0070704_100088248 3300005549 Bacteria 2304
31 Ga0070664_100166180 3300005564 Bacteria 1955
32 Ga0068854_100012983 3300005578 Bacteria 5458
33 Ga0068854_100619268 3300005578 Unclassified 926
34 Ga0068859_100083167 3300005617 Bacteria 3244
35 Ga0068859_100182467 3300005617 Bacteria 2182
36 Ga0068864_100622216 3300005618 Bacteria 1049
37 Ga0068863_100026230 3300005841 Bacteria 5561
38 Ga0068858_100176491 3300005842 Bacteria 2016
39 Ga0068858_100217505 3300005842 Bacteria 1809
40 Ga0068858_100223036 3300005842 Bacteria 1786
41 Ga0068860_100025891 3300005843 Bacteria 5659
42 Ga0068862_100001890 3300005844 Bacteria 18988
43 Ga0068862_100359782 3300005844 Bacteria 1352
44 Ga0081455_10199264 3300005937 Bacteria 1500
45 Ga0081539_10003534 3300005985 Bacteria 19012
46 Ga0081539_10034122 3300005985 Bacteria 3085
47 Ga0075364_10055291 3300006051 Unclassified 2597
48 Ga0075367_10071073 3300006178 Bacteria 2093
49 Ga0097621_100126491 3300006237 Bacteria 2171
50 Ga0075370_10228923 3300006353 Unclassified 1100
51 Ga0068871_100137943 3300006358 Bacteria 2072
52 Ga0075428_100093224 3300006844 Unclassified 3283
53 Ga0075428_100312871 3300006844 Bacteria 1688
54 Ga0075433_10403602 3300006852 Bacteria 1206
55 Ga0075434_100002382 3300006871 Bacteria 16506
56 Ga0075434_100022077 3300006871 Bacteria 6197
57 Ga0075434_100085823 3300006871 Bacteria 3147
58 Ga0075434_100164104 3300006871 Bacteria 2241
59 Ga0075429_100284244 3300006880 Bacteria 1449
60 Ga0068865_100628328 3300006881 Bacteria 910
61 Ga0075436_100011734 3300006914 Bacteria 6014
62 Ga0075436_100013123 3300006914 Bacteria 5680
63 Ga0097620_100083171 3300006931 Bacteria 3244
64 Ga0097620_100182456 3300006931 Bacteria 2182
65 Ga0075435_100000964 3300007076 Bacteria 18176
66 Ga0075435_100017093 3300007076 Bacteria 5481
67 Ga0075435_100030307 3300007076 Bacteria 4252
68 Ga0075435_100058558 3300007076 Bacteria 3120
69 Ga0075435_100072235 3300007076 Unclassified 2819
70 Ga0099794_10025213 3300007265 Bacteria 2737
71 Ga0111539_10135700 3300009094 Bacteria 2882
72 Ga0111539_10146982 3300009094 Bacteria 2760
73 Ga0105245_10006055 3300009098 Bacteria 10633
74 Ga0105247_10011099 3300009101 Bacteria 5433
75 Ga0105247_10097172 3300009101 Bacteria 1878
76 Ga0114129_10000382 3300009147 Bacteria 51464
77 Ga0114129_10014894 3300009147 Bacteria 11079
78 Ga0114129_10016294 3300009147 Bacteria 10579
79 Ga0114129_10017759 3300009147 Bacteria 10130
80 Ga0114129_10024078 3300009147 Bacteria 8627
81 Ga0114129_10063165 3300009147 Bacteria 5172
82 Ga0114129_10092407 3300009147 Bacteria 4192
83 Ga0114129_10110045 3300009147 Bacteria 3803
84 Ga0114129_10131298 3300009147 Bacteria 3439
85 Ga0114129_10893988 3300009147 Bacteria 1126
86 Ga0105242_10086396 3300009176 Bacteria 2632
87 Ga0105248_10008586 3300009177 Bacteria 11220
88 Ga0105248_10012675 3300009177 Bacteria 9302
89 Ga0105248_10134479 3300009177 Bacteria 2790
90 Ga0105248_10237025 3300009177 Unclassified 2054
91 Ga0105248_10252461 3300009177 Bacteria 1985
92 Ga0105248_10483970 3300009177 Bacteria 1395
93 Ga0105248_10675930 3300009177 Bacteria 1165
94 Ga0105237_10016470 3300009545 Bacteria 7679
95 Ga0105237_10027993 3300009545 Bacteria 5743
96 Ga0105237_10049884 3300009545 Bacteria 4206
97 Ga0105239_11197243 3300010375 Unclassified 875
98 Ga0157374_10090967 3300013296 Bacteria 2909
99 Ga0157378_10645730 3300013297 Bacteria 1073
100 Ga0157378_10794452 3300013297 Bacteria 972
101 Ga0163162_10102349 3300013306 Bacteria 2957
102 Ga0157375_10163267 3300013308 Bacteria 2371
103 Ga0163163_10649072 3300014325 Bacteria 1119
104 Ga0157380_10130827 3300014326 Unclassified 2141
105 Ga0157380_10206215 3300014326 Bacteria 1748
106 Ga0157380_10563365 3300014326 Bacteria 1120
107 Ga0163161_10226412 3300017792 Bacteria 1450
108 Ga0207710_10072439 3300025900 Bacteria 1582
109 Ga0207680_10090384 3300025903 Bacteria 1946
110 Ga0207680_10097148 3300025903 Unclassified 1885
111 Ga0207684_10641773 3300025910 Bacteria 905
112 Ga0207654_10228152 3300025911 Bacteria 1239
113 Ga0207654_10508726 3300025911 Bacteria 851
114 Ga0207707_10428186 3300025912 Unclassified 1134
115 Ga0207671_10017196 3300025914 Bacteria 5586
116 Ga0207671_10066274 3300025914 Bacteria 2687
117 Ga0207646_10381153 3300025922 Bacteria 1274
118 Ga0207659_10005728 3300025926 Bacteria 7566
119 Ga0207659_10006211 3300025926 Bacteria 7309
120 Ga0207687_10038575 3300025927 Bacteria 3265
121 Ga0207664_10087195 3300025929 Bacteria 2551
122 Ga0207644_10005063 3300025931 Bacteria 8602
123 Ga0207670_10127255 3300025936 Bacteria 1861
124 Ga0207669_10004534 3300025937 Bacteria 6128
125 Ga0207669_10261395 3300025937 Bacteria 1295
126 Ga0207704_10118617 3300025938 Bacteria 1805
127 Ga0207691_10075364 3300025940 Bacteria 3042
128 Ga0207711_10023325 3300025941 Bacteria 5179
129 Ga0207711_10069455 3300025941 Bacteria 3054
130 Ga0207689_10274223 3300025942 Bacteria 1396
131 Ga0207651_10119179 3300025960 Bacteria 1998
132 Ga0207668_10105072 3300025972 Bacteria 2107
133 Ga0207668_10711012 3300025972 Unclassified 884
134 Ga0207640_10010622 3300025981 Bacteria 5193
135 Ga0207677_10040706 3300026023 Bacteria 3066
136 Ga0207677_10075757 3300026023 Bacteria 2392
137 Ga0207677_10475634 3300026023 Unclassified 1075
138 Ga0207678_10227154 3300026067 Bacteria 1598
139 Ga0207641_10000334 3300026088 Bacteria 57516
140 Ga0207641_10086214 3300026088 Bacteria 2738
141 Ga0207648_10044161 3300026089 Bacteria 3910
142 Ga0207675_100213062 3300026118 Bacteria 1859
143 Ga0207675_100746146 3300026118 Bacteria 990
144 Ga0207683_10012815 3300026121 Bacteria 7157
145 Ga0207428_10086489 3300027907 Bacteria 2440
146 Ga0268266_10199672 3300028379 Unclassified 1830
147 Ga0268264_10012959 3300028381 Bacteria 6855
148 Ga0268264_10894134 3300028381 Unclassified 891
149 Ga0268264_11042846 3300028381 Bacteria 825
150 Ga0265314_10042605 3300031711 Bacteria 3236
151 Ga0373949_0068396 3300035090 Bacteria 926
152 Ga0373943_0222439 3300035170 Bacteria 1052
153 Ga0373931_0156739 3300035691 Bacteria 1331
154 Ga0373937_0186947 3300036401 Bacteria 1946
155 Ga0439431_0048529 3300041997 Unclassified 1097
156 Ga0439435_0010116 3300042436 Bacteria 2230
157 Ga0466963_0101343 3300044694 Bacteria 1971
158 Ga0451576_0316564 3300045051 Bacteria 1633
159 Ga0495638_0028870 3300046460 Bacteria 3579
160 Ga0495580_0085023 3300046472 Bacteria 2204
161 Ga0495580_0301396 3300046472 Bacteria 1091
162 Ga0495640_0201386 3300046533 Bacteria 1261
163 Ga0495621_0051935 3300046539 Unclassified 1468
164 Ga0495672_0023581 3300047320 Bacteria 3981
165 Ga0496104_0076560 3300048907 Bacteria 3187
166 Ga0496104_0101188 3300048907 Bacteria 2759
167 Ga0496104_0312038 3300048907 Unclassified 1486
168 Ga0496105_0045053 3300048908 Bacteria 3640
169 Ga0496106_0392006 3300048909 Bacteria 1116
170 Ga0496108_0056780 3300048911 Bacteria 3290
171 Ga0496108_0451063 3300048911 Bacteria 1124
172 Ga0496109_0039313 3300048912 Bacteria 4282
173 Ga0496109_0142221 3300048912 Unclassified 2244
174 Ga0496109_0236474 3300048912 Bacteria 1719
175 Ga0496112_0107649 3300048915 Bacteria 2758
176 Ga0501034_0012791 3300049571 Bacteria 8656
177 Ga0501039_0015223 3300049575 Bacteria 5887
178 Ga0501040_0011329 3300049576 Bacteria 5835
179 Ga0501040_0142637 3300049576 Unclassified 1688
180 Ga0501042_0000590 3300049578 Bacteria 19274
181 Ga0501042_0169956 3300049578 Bacteria 1573
182 Ga0501046_0002991 3300049580 Bacteria 15623
183 Ga0501047_0084531 3300049581 Bacteria 3050
184 Ga0501048_0352654 3300049582 Bacteria 1049
185 Ga0501071_0016677 3300049587 Bacteria 5053
186 Ga0501072_0008980 3300049588 Bacteria 7602
187 Ga0501072_0045811 3300049588 Bacteria 3440
188 Ga0501075_0030982 3300049591 Unclassified 3966
189 Ga0501076_0002822 3300049592 Bacteria 12012
190 Ga0501076_0076550 3300049592 Bacteria 2683
191 Ga0501077_0214574 3300049593 Unclassified 1223
192 Ga0501079_0005361 3300049741 Bacteria 9550
193 Ga0501079_0162930 3300049741 Bacteria 1739
194 Ga0501080_0335119 3300049742 Bacteria 1368
195 Ga0501081_0011176 3300049743 Bacteria 5871
196 Ga0501081_0030480 3300049743 Bacteria 3651
197 Ga0501081_0154208 3300049743 Bacteria 1652
198 Ga0501083_0077618 3300049744 Bacteria 2204
199 Ga0501035_0081148 3300049822 Bacteria 2863
200 Ga0501045_0003790 3300049824 Bacteria 10399
201 nmdc:mga00v17_114375_c1 3300050491 Bacteria 1714
202 nmdc:mga00v17_24820_c1 3300050491 Unclassified 3479
203 nmdc:mga06z11_48486_c1 3300050494 Bacteria 2162
204 nmdc:mga05p37_101297_c1 3300050507 Bacteria 3547
205 nmdc:mga05p37_101736_c1 3300050507 Bacteria 3538
206 nmdc:mga05p37_104510_c1 3300050507 Bacteria 3485
207 nmdc:mga05p37_111396_c1 3300050507 Bacteria 3366
208 nmdc:mga05p37_113252_c1 3300050507 Bacteria 3335
209 nmdc:mga05p37_124996_c1 3300050507 Bacteria 3159
210 nmdc:mga05p37_15416_c1 3300050507 Bacteria 9182
211 nmdc:mga05p37_240200_c1 3300050507 Bacteria 2178
212 nmdc:mga05p37_4217_c1 3300050507 Bacteria 16790
213 nmdc:mga05p37_9064_c1 3300050507 Bacteria 11762
214 nmdc:mga05p37_9569_c1 3300050507 Bacteria 11478
215 nmdc:mga06r32_786305_c1 3300050510 Bacteria 913
216 nmdc:mga06r32_881497_c1 3300050510 Unclassified 852
217 nmdc:mga08y16_101782_c1 3300050511 Bacteria 2991
218 nmdc:mga08y16_243966_c1 3300050511 Bacteria 1857
219 nmdc:mga0n895_25825_c1 3300050512 Bacteria 5555
220 nmdc:mga0n895_309328_c1 3300050512 Bacteria 1602
221 nmdc:mga0n895_32655_c1 3300050512 Bacteria 4997
222 nmdc:mga0n895_454688_c1 3300050512 Bacteria 1293
223 nmdc:mga0n895_63387_c1 3300050512 Bacteria 3655
224 nmdc:mga0n895_860435_c1 3300050512 Unclassified 894
225 nmdc:mga0rr50_137212_c1 3300050513 Bacteria 1965
226 nmdc:mga0rr50_204128_c1 3300050513 Bacteria 1626
227 nmdc:mga0rr50_216887_c1 3300050513 Bacteria 1579
228 nmdc:mga0rr50_383972_c1 3300050513 Bacteria 1185
229 nmdc:mga0rr50_60776_c1 3300050513 Unclassified 2844
230 nmdc:mga0rr50_92139_c1 3300050513 Unclassified 2362
231 nmdc:mga08x19_112278_c1 3300050514 Bacteria 1819
232 nmdc:mga08x19_151332_c1 3300050514 Bacteria 1571
233 nmdc:mga08x19_15850_c1 3300050514 Bacteria 4590
234 nmdc:mga08x19_398610_c1 3300050514 Unclassified 965
235 nmdc:mga08x19_4494_c1 3300050514 Bacteria 8267
236 nmdc:mga0a205_141294_c1 3300050515 Bacteria 2308
237 nmdc:mga0a205_201722_c1 3300050515 Bacteria 1879
238 nmdc:mga0a205_213342_c1 3300050515 Bacteria 1818
239 nmdc:mga0a205_480324_c1 3300050515 Archaea 1101
240 Ga0500568_0001689 3300053139 Bacteria 13776
241 Ga0501084_0001688 3300054114 Bacteria 17539
242 Ga0587084_029875 3300059477 Bacteria 871
243 Ga0501082_0052194 3300060353 Bacteria 3524
244 Ga0530510_0051792 3300061734 Bacteria 2967
245 Ga0068871_100002616
246 Ga0070676_10078379
247 Ga0070666_10185556
248 Ga0068868_100093631
249 Ga0068868_100509491
250 Ga0070687_100405247
251 Ga0070668_100181610
252 Ga0070675_100000301
253 Ga0070675_100000520
254 Ga0070675_100509045
255 Ga0070671_100008102
256 Ga0070673_100014110
257 Ga0070673_100377562
258 Ga0070688_100057623
259 Ga0070667_100016501
260 Ga0070708_100025970
261 Ga0070678_100494871
262 Ga0068867_100053064
263 Ga0068867_100083688
264 Ga0068867_100148786
265 Ga0070685_10191059
266 Ga0070685_10455595
267 Ga0070707_100157451
268 Ga0070707_100609753
269 Ga0070699_100005305
270 Ga0070699_100241427
271 Ga0070697_100353829
272 Ga0070686_100134697
273 Ga0070665_100010025
274 Ga0070704_100088248
275 Ga0070664_100166180
276 Ga0068854_100012983
277 Ga0068854_100619268
278 Ga0068859_100083167
279 Ga0068859_100182467
280 Ga0068864_100622216
281 Ga0068863_100026230
282 Ga0068858_100176491
283 Ga0068858_100217505
284 Ga0068858_100223036
285 Ga0068860_100025891
286 Ga0068862_100001890
287 Ga0068862_100359782
288 Ga0081455_10199264
289 Ga0081539_10003534
290 Ga0081539_10034122
291 Ga0075364_10055291
292 Ga0075367_10071073
293 Ga0097621_100126491
294 Ga0075370_10228923
295 Ga0068871_100137943
296 Ga0075428_100093224
297 Ga0075428_100312871
298 Ga0075433_10403602
299 Ga0075434_100002382
300 Ga0075434_100022077
301 Ga0075434_100085823
302 Ga0075434_100164104
303 Ga0075429_100284244
304 Ga0068865_100628328
305 Ga0075436_100011734
306 Ga0075436_100013123
307 Ga0097620_100083171
308 Ga0097620_100182456
309 Ga0075435_100000964
310 Ga0075435_100017093
311 Ga0075435_100030307
312 Ga0075435_100058558
313 Ga0075435_100072235
314 Ga0099794_10025213
315 Ga0111539_10135700
316 Ga0111539_10146982
317 Ga0105245_10006055
318 Ga0105247_10011099
319 Ga0105247_10097172
320 Ga0114129_10000382
321 Ga0114129_10014894
322 Ga0114129_10016294
323 Ga0114129_10017759
324 Ga0114129_10024078
325 Ga0114129_10063165
326 Ga0114129_10092407
327 Ga0114129_10110045
328 Ga0114129_10131298
329 Ga0114129_10893988
330 Ga0105242_10086396
331 Ga0105248_10008586
332 Ga0105248_10012675
333 Ga0105248_10134479
334 Ga0105248_10237025
335 Ga0105248_10252461
336 Ga0105248_10483970
337 Ga0105248_10675930
338 Ga0105237_10016470
339 Ga0105237_10027993
340 Ga0105237_10049884
341 Ga0105239_11197243
342 Ga0157374_10090967
343 Ga0157378_10645730
344 Ga0157378_10794452
345 Ga0163162_10102349
346 Ga0157375_10163267
347 Ga0163163_10649072
348 Ga0157380_10130827
349 Ga0157380_10206215
350 Ga0157380_10563365
351 Ga0163161_10226412
352 Ga0207710_10072439
353 Ga0207680_10090384
354 Ga0207680_10097148
355 Ga0207684_10641773
356 Ga0207654_10228152
357 Ga0207654_10508726
358 Ga0207707_10428186
359 Ga0207671_10017196
360 Ga0207671_10066274
361 Ga0207646_10381153
362 Ga0207659_10005728
363 Ga0207659_10006211
364 Ga0207687_10038575
365 Ga0207664_10087195
366 Ga0207644_10005063
367 Ga0207670_10127255
368 Ga0207669_10004534
369 Ga0207669_10261395
370 Ga0207704_10118617
371 Ga0207691_10075364
372 Ga0207711_10023325
373 Ga0207711_10069455
374 Ga0207689_10274223
375 Ga0207651_10119179
376 Ga0207668_10105072
377 Ga0207668_10711012
378 Ga0207640_10010622
379 Ga0207677_10040706
380 Ga0207677_10075757
381 Ga0207677_10475634
382 Ga0207678_10227154
383 Ga0207641_10000334
384 Ga0207641_10086214
385 Ga0207648_10044161
386 Ga0207675_100213062
387 Ga0207675_100746146
388 Ga0207683_10012815
389 Ga0207428_10086489
390 Ga0268266_10199672
391 Ga0268264_10012959
392 Ga0268264_10894134
393 Ga0268264_11042846
394 Ga0265314_10042605
395 Ga0373949_0068396
396 Ga0373943_0222439
397 Ga0373931_0156739
398 Ga0373937_0186947
399 Ga0439431_0048529
400 Ga0439435_0010116
401 Ga0466963_0101343
402 Ga0451576_0316564
403 Ga0495638_0028870
404 Ga0495580_0085023
405 Ga0495580_0301396
406 Ga0495640_0201386
407 Ga0495621_0051935
408 Ga0495672_0023581
409 Ga0496104_0076560
410 Ga0496104_0101188
411 Ga0496104_0312038
412 Ga0496105_0045053
413 Ga0496106_0392006
414 Ga0496108_0056780
415 Ga0496108_0451063
416 Ga0496109_0039313
417 Ga0496109_0142221
418 Ga0496109_0236474
419 Ga0496112_0107649
420 Ga0501034_0012791
421 Ga0501039_0015223
422 Ga0501040_0011329
423 Ga0501040_0142637
424 Ga0501042_0000590
425 Ga0501042_0169956
426 Ga0501046_0002991
427 Ga0501047_0084531
428 Ga0501048_0352654
429 Ga0501071_0016677
430 Ga0501072_0008980
431 Ga0501072_0045811
432 Ga0501075_0030982
433 Ga0501076_0002822
434 Ga0501076_0076550
435 Ga0501077_0214574
436 Ga0501079_0005361
437 Ga0501079_0162930
438 Ga0501080_0335119
439 Ga0501081_0011176
440 Ga0501081_0030480
441 Ga0501081_0154208
442 Ga0501083_0077618
443 Ga0501035_0081148
444 Ga0501045_0003790
445 nmdc:mga00v17_114375_c1
446 nmdc:mga00v17_24820_c1
447 nmdc:mga06z11_48486_c1
448 nmdc:mga05p37_101297_c1
449 nmdc:mga05p37_101736_c1
450 nmdc:mga05p37_104510_c1
451 nmdc:mga05p37_111396_c1
452 nmdc:mga05p37_113252_c1
453 nmdc:mga05p37_124996_c1
454 nmdc:mga05p37_15416_c1
455 nmdc:mga05p37_240200_c1
456 nmdc:mga05p37_4217_c1
457 nmdc:mga05p37_9064_c1
458 nmdc:mga05p37_9569_c1
459 nmdc:mga06r32_786305_c1
460 nmdc:mga06r32_881497_c1
461 nmdc:mga08y16_101782_c1
462 nmdc:mga08y16_243966_c1
463 nmdc:mga0n895_25825_c1
464 nmdc:mga0n895_309328_c1
465 nmdc:mga0n895_32655_c1
466 nmdc:mga0n895_454688_c1
467 nmdc:mga0n895_63387_c1
468 nmdc:mga0n895_860435_c1
469 nmdc:mga0rr50_137212_c1
470 nmdc:mga0rr50_204128_c1
471 nmdc:mga0rr50_216887_c1
472 nmdc:mga0rr50_383972_c1
473 nmdc:mga0rr50_60776_c1
474 nmdc:mga0rr50_92139_c1
475 nmdc:mga08x19_112278_c1
476 nmdc:mga08x19_151332_c1
477 nmdc:mga08x19_15850_c1
478 nmdc:mga08x19_398610_c1
479 nmdc:mga08x19_4494_c1
480 nmdc:mga0a205_141294_c1
481 nmdc:mga0a205_201722_c1
482 nmdc:mga0a205_213342_c1
483 nmdc:mga0a205_480324_c1
484 Ga0500568_0001689
485 Ga0501084_0001688
486 Ga0587084_029875
487 Ga0501082_0052194
488 Ga0530510_0051792

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00487

FA_desaturase

Fatty acid desaturase

30

240

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ymk-assembly2.cif.gz_D crystal structure of stearoyl-coenzyme a desaturase 1 0.7668 6 243
4zyo-assembly1.cif.gz_A crystal structure of human integral membrane stearoyl-coa desaturase with substrate 0.7612 12 243
4ymk-assembly2.cif.gz_D crystal structure of stearoyl-coenzyme a desaturase 1 0.7477 6 243
4zyo-assembly1.cif.gz_A crystal structure of human integral membrane stearoyl-coa desaturase with substrate 0.7261 12 243
3ipu-assembly1.cif.gz_B x-ray structure of benzisoxazole urea synthetic agonist bound to the lxr-alpha 0.2659 5 232
ID Description Score Start End Superfamily
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.4702 2 230 3.30.40.10
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.4466 2 230 3.30.40.10
af_A0A1D6HBC2_48_308_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3053 15 205 1.20.1250.20
af_M0RA42_232_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2799 2 197 1.20.1250.20
af_Q39872_14_142_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2716 11 141 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A383CHY3-F1-model_v4 Fatty acid desaturase domain-containing protein 0.9292 3 158 GO:0006631
GO:0016020
GO:0016717
AF-A0A2V6X793-F1-model_v4 Fatty acid desaturase domain-containing protein 0.9202 10 160 GO:0006631
GO:0016020
GO:0016717
AF-A0A538LP80-F1-model_v4 Fatty acid desaturase domain-containing protein 0.9073 2 237 GO:0006631
GO:0016020
GO:0016717
AF-A0A2V8E4S1-F1-model_v4 Fatty acid desaturase domain-containing protein 0.906 2 242 GO:0006631
GO:0016020
GO:0016717
AF-A0A2V8GNB7-F1-model_v4 Fatty acid desaturase domain-containing protein 0.9043 2 244 GO:0006631
GO:0016020
GO:0016717

Map