F348529

General Info

Members Datasets Scaffolds Average Seq Length
235 175 470 736

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0003129|Ga0501031_0003129_1802_4150
Length 782
Sequence MNLAASPSAMVCTKPAYAVMMIPRRTFLRLSLVWPFALPIAPTALLQAAERSDSDHEKQREETLTKGRPTTVESLADAVVCKNENVFFVARPDGNVPLKDSHGLGLYYHDCRYVNGYEFQLAGKKPAPLSASSVQGSIGIFILTNPKIELAGGDVLDKEELGLTWWRLVDSEALALRDRLQIENFTQRAIRFPITLTIESAFEDLFAVRGLLPKQLGTLHPPSWDGDILRLSYDGKDGIVRTLTVHFDPPPATRRDTTAEFVVHLSPRARQQINVTLVIGESKDRTAAARKPDPQTFDRLEAKQEEETQAWMAHVTKVSTNGSSLDELLERSFRGLRVLRTHLGHETYFAAGVPWFVTLFGRDSLITAWQMLAFHPRIAEQTLRLLARYQGTKEDHWRDEQPGKILHELRVGEMAHVDAIPHTPFYGTVDATPLFLMLLAQHAAWTGSLDLFEELRSPVERALSWMDDYGDRHGEGYLAYVSRAKKNLINKGWKDSGDAIVNADGHLAHPPIALVEVQGYGYAAKLGMAALFERAGDPDRAHRLRREAGQLRERFNRDFWMESLGCYVLALQAEGRPAAVISSNPGQALWTGIADEDKAERTIRRLMADDMFSGWGVRTLSSKERAYNPIAYHLGTVWPHDNSLVAAGCRRYGHDEEALRIFHGLFDAAFHFRAHQLPELFCGFSRKEYEIPVSYPVACHPQAWASGSIPFLLTTLLGLSPVAFDKRLRIVRPLLPEFLDRLELRRLRVGEATADLRFQRGPKGIHVDVMKLDGKLDIEVEK

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
84 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
92 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
98 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
99 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
100 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
101 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
102 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
112 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
113 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
114 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
115 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
116 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
117 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
118 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
119 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
120 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
121 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
122 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
123 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
124 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
125 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
126 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
127 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
128 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
129 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
130 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
131 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
132 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
133 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
134 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
135 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
136 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
137 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
146 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
147 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
148 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
149 2847686936 Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 Isolate Nodule
150 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
151 2871444079 Mesorhizobium sp. M1A.F.Ca.IN.020.06.1.1 Isolate Nodule
152 2874102143 Mesorhizobium sp. M1A.F.Ca.IN.022.04.1.1 Isolate Nodule
153 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
154 2876377896 Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 Isolate Nodule
155 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
156 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
157 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
158 2906328253 Mesorhizobium sp. M1A.T.Ca.IN.004.03.1.1 Isolate Nodule
159 2922158528 Mesorhizobium sp. M1A.F.Ca.IN.022.05.2.1 Isolate Nodule
160 2924726620 Mesorhizobium sp. M1A.F.Ca.IN.020.03.2.1 Isolate Nodule
161 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
162 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
163 2958115193 Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 Isolate Nodule
164 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
165 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
166 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
167 2968097103 Mesorhizobium sp. M1A.F.Ca.IN.020.30.1.1 Isolate Nodule
168 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
169 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
170 2977858184 Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 Isolate Nodule
171 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
172 2979779861 Mesorhizobium sp. M1A.F.Ca.IN.022.02.1.1 Isolate Nodule
173 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
174 8004445564 Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 Isolate Nodule
175 8004703790 Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.81
Metatranscriptomes 0
Isolates 13.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.28
Nodule 10.21
Rhizoplane 3.4
Rhizosphere 79.57
Stem 0
Stem Tuber 0
Unclassified 4.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0003129 3300049568 Bacteria 10608
2 JGI25165J46597_1000019 3300003214 Bacteria 371528
3 Ga0065704_10078560 3300005289 Bacteria 4394
4 Ga0070683_100004652 3300005329 Bacteria 11344
5 Ga0070683_100029596 3300005329 Bacteria 4960
6 Ga0070683_100037585 3300005329 Bacteria 4432
7 Ga0070670_100018479 3300005331 Bacteria 5981
8 Ga0070660_100009831 3300005339 Bacteria 6744
9 Ga0070673_100021419 3300005364 Bacteria 4686
10 Ga0070659_100019316 3300005366 Bacteria 5161
11 Ga0070659_100041149 3300005366 Bacteria 3611
12 Ga0070714_100020198 3300005435 Bacteria 5436
13 Ga0070714_100033360 3300005435 Bacteria 4303
14 Ga0070714_100041443 3300005435 Bacteria 3885
15 Ga0070713_100004218 3300005436 Bacteria 9601
16 Ga0070705_100013870 3300005440 Bacteria 4131
17 Ga0070708_100001742 3300005445 Bacteria 16701
18 Ga0070708_100014386 3300005445 Bacteria 6509
19 Ga0070708_100060632 3300005445 Bacteria 3377
20 Ga0070708_100098068 3300005445 Bacteria 2680
21 Ga0070663_100057196 3300005455 Bacteria 2797
22 Ga0070678_100032268 3300005456 Bacteria 3623
23 Ga0070681_10003440 3300005458 Bacteria 14823
24 Ga0070681_10017920 3300005458 Bacteria 7079
25 Ga0070681_10019907 3300005458 Bacteria 6724
26 Ga0070706_100022683 3300005467 Bacteria 5780
27 Ga0070707_100008703 3300005468 Bacteria 9412
28 Ga0070707_100019450 3300005468 Bacteria 6398
29 Ga0070707_100057852 3300005468 Bacteria 3719
30 Ga0070698_100081163 3300005471 Unclassified 3238
31 Ga0070698_100089580 3300005471 Unclassified 3060
32 Ga0070679_100019144 3300005530 Bacteria 6652
33 Ga0070679_100025659 3300005530 Bacteria 5783
34 Ga0070684_100006189 3300005535 Bacteria 9233
35 Ga0070697_100041755 3300005536 Bacteria 3713
36 Ga0068853_100056783 3300005539 Bacteria 3376
37 Ga0068855_100008224 3300005563 Bacteria 12611
38 Ga0068855_100098064 3300005563 Bacteria 3376
39 Ga0070664_100010701 3300005564 Bacteria 7440
40 Ga0068857_100008199 3300005577 Bacteria 9027
41 Ga0068857_100047891 3300005577 Bacteria 3796
42 Ga0068856_100002451 3300005614 Bacteria 19090
43 Ga0068856_100011702 3300005614 Bacteria 8510
44 Ga0081539_10006656 3300005985 Bacteria 10949
45 Ga0070717_10055973 3300006028 Unclassified 3256
46 Ga0097621_100001424 3300006237 Bacteria 16415
47 Ga0068871_100001749 3300006358 Bacteria 14642
48 Ga0075433_10012099 3300006852 Bacteria 6960
49 Ga0075434_100049617 3300006871 Bacteria 4168
50 Ga0105240_10021068 3300009093 Bacteria 8676
51 Ga0105240_10024557 3300009093 Bacteria 7944
52 Ga0105240_10034822 3300009093 Bacteria 6492
53 Ga0105240_10052081 3300009093 Bacteria 5146
54 Ga0105240_10071314 3300009093 Bacteria 4297
55 Ga0105240_10145729 3300009093 Bacteria 2826
56 Ga0111539_10076413 3300009094 Bacteria 3943
57 Ga0105238_10003086 3300009551 Bacteria 16610
58 Ga0105238_10037917 3300009551 Bacteria 4897
59 Ga0105238_10073458 3300009551 Bacteria 3414
60 Ga0105238_10131876 3300009551 Bacteria 2477
61 Ga0105249_10042667 3300009553 Bacteria 4127
62 Ga0105239_10001234 3300010375 Bacteria 34856
63 Ga0105239_10019212 3300010375 Bacteria 7548
64 Ga0105239_10074568 3300010375 Bacteria 3730
65 Ga0105239_10157209 3300010375 Unclassified 2539
66 Ga0157373_10044474 3300013100 Bacteria 3170
67 Ga0157370_10026157 3300013104 Bacteria 5764
68 Ga0157369_10005905 3300013105 Bacteria 14223
69 Ga0157369_10081860 3300013105 Bacteria 3454
70 Ga0157374_10000794 3300013296 Bacteria 27675
71 Ga0157374_10017215 3300013296 Bacteria 6362
72 Ga0157374_10026211 3300013296 Bacteria 5244
73 Ga0157378_10014768 3300013297 Bacteria 6840
74 Ga0157372_10002184 3300013307 Bacteria 21290
75 Ga0157372_10004244 3300013307 Bacteria 15323
76 Ga0157372_10026232 3300013307 Bacteria 6340
77 Ga0157372_10050440 3300013307 Bacteria 4629
78 Ga0163163_10056849 3300014325 Unclassified 3867
79 Ga0213876_10000792 3300021384 Bacteria 21440
80 Ga0213876_10010083 3300021384 Bacteria 5077
81 Ga0209233_1000034 3300025261 Bacteria 578898
82 Ga0207645_10002250 3300025907 Bacteria 15353
83 Ga0207645_10036594 3300025907 Bacteria 3152
84 Ga0207684_10015813 3300025910 Bacteria 6488
85 Ga0207684_10047158 3300025910 Unclassified 3655
86 Ga0207654_10048409 3300025911 Bacteria 2433
87 Ga0207707_10000894 3300025912 Bacteria 29148
88 Ga0207707_10007611 3300025912 Bacteria 9441
89 Ga0207707_10052494 3300025912 Bacteria 3549
90 Ga0207695_10024157 3300025913 Bacteria 6846
91 Ga0207695_10038441 3300025913 Bacteria 5152
92 Ga0207695_10070442 3300025913 Bacteria 3574
93 Ga0207695_10111833 3300025913 Bacteria 2710
94 Ga0207657_10001442 3300025919 Bacteria 25436
95 Ga0207657_10023277 3300025919 Bacteria 5771
96 Ga0207652_10008221 3300025921 Bacteria 8380
97 Ga0207652_10052237 3300025921 Bacteria 3507
98 Ga0207646_10003117 3300025922 Bacteria 19032
99 Ga0207646_10024312 3300025922 Bacteria 5550
100 Ga0207694_10072361 3300025924 Bacteria 2695
101 Ga0207650_10020500 3300025925 Bacteria 4663
102 Ga0207664_10073639 3300025929 Bacteria 2757
103 Ga0207706_10012695 3300025933 Bacteria 7669
104 Ga0207691_10020774 3300025940 Bacteria 6207
105 Ga0207661_10002685 3300025944 Bacteria 12240
106 Ga0207679_10007288 3300025945 Bacteria 7009
107 Ga0207667_10027321 3300025949 Bacteria 6213
108 Ga0207667_10073310 3300025949 Bacteria 3557
109 Ga0207651_10054828 3300025960 Unclassified 2734
110 Ga0207639_10021621 3300026041 Bacteria 4624
111 Ga0207708_10029550 3300026075 Bacteria 4154
112 Ga0207702_10003358 3300026078 Bacteria 14674
113 Ga0207702_10004822 3300026078 Bacteria 11889
114 Ga0207674_10001423 3300026116 Bacteria 30895
115 Ga0207674_10005207 3300026116 Bacteria 15481
116 Ga0207683_10002083 3300026121 Bacteria 17643
117 Ga0207683_10016096 3300026121 Bacteria 6364
118 Ga0207698_10067315 3300026142 Bacteria 2824
119 Ga0265338_10000622 3300028800 Bacteria 61770
120 Ga0265325_10001834 3300031241 Bacteria 14689
121 Ga0265339_10001427 3300031249 Bacteria 17727
122 Ga0265327_10000175 3300031251 Bacteria 137193
123 Ga0307408_100037408 3300031548 Bacteria 3418
124 Ga0265313_10000574 3300031595 Bacteria 38429
125 Ga0265314_10056875 3300031711 Bacteria 2690
126 Ga0307405_10036462 3300031731 Bacteria 2947
127 Ga0307410_10012760 3300031852 Bacteria 4873
128 Ga0307406_10005160 3300031901 Bacteria 7125
129 Ga0373925_0029869 3300037068 Bacteria 3999
130 Ga0373925_0038225 3300037068 Bacteria 3548
131 Ga0395900_0031636 3300037418 Bacteria 5439
132 Ga0436365_1298604 3300039437 Bacteria 3616
133 Ga0436365_1541037 3300039437 Bacteria 3262
134 Ga0436365_1542239 3300039437 Bacteria 5666
135 Ga0436365_1586327 3300039437 Bacteria 63407
136 Ga0436363_0340667 3300039450 Bacteria 5867
137 Ga0436362_0462201 3300039453 Bacteria 3547
138 Ga0466972_0004629 3300044658 Bacteria 6887
139 Ga0466965_0008773 3300044683 Bacteria 4685
140 Ga0466968_0001299 3300044735 Bacteria 8914
141 Ga0466957_0000065 3300044842 Bacteria 40207
142 Ga0466958_0036423 3300045836 Unclassified 2945
143 Ga0466967_0050205 3300045976 Bacteria 3652
144 Ga0496101_0031478 3300048904 Bacteria 3730
145 Ga0496102_0035057 3300048905 Bacteria 4516
146 Ga0496104_0017718 3300048907 Bacteria 6491
147 Ga0496106_0076897 3300048909 Unclassified 2559
148 Ga0496112_0009732 3300048915 Bacteria 8678
149 Ga0496112_0122924 3300048915 Unclassified 2566
150 Ga0496114_0018743 3300048917 Bacteria 5600
151 Ga0501292_000204 3300049515 Bacteria 9223
152 Ga0501296_000041 3300049519 Bacteria 14370
153 Ga0501297_000333 3300049520 Bacteria 4502
154 Ga0501300_000204 3300049523 Bacteria 9025
155 Ga0501303_000101 3300049526 Bacteria 7241
156 Ga0501031_0021909 3300049568 Bacteria 4163
157 Ga0501036_0021689 3300049572 Bacteria 5400
158 Ga0501037_0007303 3300049573 Bacteria 8079
159 Ga0501037_0025780 3300049573 Unclassified 4342
160 Ga0501037_0035578 3300049573 Bacteria 3672
161 Ga0501038_0031663 3300049574 Bacteria 4672
162 Ga0501039_0003540 3300049575 Bacteria 11699
163 Ga0501039_0004399 3300049575 Bacteria 10625
164 Ga0501039_0015894 3300049575 Bacteria 5762
165 Ga0501039_0018111 3300049575 Bacteria 5405
166 Ga0501041_0004515 3300049577 Bacteria 8070
167 Ga0501042_0001555 3300049578 Bacteria 13573
168 Ga0501046_0014706 3300049580 Bacteria 6590
169 Ga0501048_0005036 3300049582 Bacteria 10072
170 Ga0501076_0045270 3300049592 Bacteria 3474
171 Ga0501199_000061 3300049650 Bacteria 7302
172 Ga0501202_003451 3300049652 Bacteria 2707
173 Ga0501207_001519 3300049654 Bacteria 2912
174 Ga0501216_000321 3300049660 Bacteria 5407
175 Ga0501217_006506 3300049661 Bacteria 2483
176 Ga0501227_000441 3300049665 Bacteria 8786
177 Ga0501230_000243 3300049667 Bacteria 4920
178 Ga0501233_001579 3300049668 Bacteria 3917
179 Ga0501236_000501 3300049670 Bacteria 4413
180 Ga0501239_000179 3300049672 Bacteria 4427
181 Ga0501219_001565 3300049703 Bacteria 2106
182 Ga0501221_003915 3300049704 Bacteria 2457
183 Ga0501225_0002691 3300049705 Bacteria 5457
184 Ga0501234_000402 3300049707 Bacteria 6407
185 Ga0501245_000774 3300049708 Bacteria 3988
186 Ga0501264_000526 3300049761 Bacteria 5636
187 Ga0501269_002246 3300049766 Bacteria 2400
188 Ga0501270_000042 3300049767 Bacteria 9575
189 Ga0501272_000073 3300049769 Bacteria 7344
190 Ga0501273_000079 3300049770 Bacteria 6116
191 Ga0501274_000582 3300049771 Bacteria 2630
192 Ga0501279_000803 3300049775 Bacteria 4125
193 Ga0501282_000494 3300049778 Bacteria 4694
194 Ga0501283_002522 3300049779 Bacteria 2379
195 Ga0501204_000296 3300049850 Bacteria 4114
196 Ga0501212_000235 3300049851 Bacteria 4982
197 Ga0501226_000279 3300049853 Bacteria 7679
198 nmdc:mga0n895_1199_c1 3300050512 Bacteria 19110
199 nmdc:mga0rr50_26967_c1 3300050513 Bacteria 4017
200 nmdc:mga0a205_3286_c1 3300050515 Bacteria 14381
201 Ga0495612_0001378 3300053078 Bacteria 10021
202 Ga0495619_0022138 3300053085 Bacteria 4064
203 Ga0500608_000377 3300053122 Bacteria 17215
204 Ga0501084_0078333 3300054114 Bacteria 2770
205 2513609664 2513237090 Bacteria 7096802
206 2599935600 2599185301 Bacteria 6161860
207 2657684226 2657244999 Bacteria 5946535
208 2804754188 2802429268 Bacteria 6094027
209 2847689574 2847686936 Bacteria 6278406
210 2869168638 2869162929 Bacteria 6399702
211 2871446937 2871444079 Bacteria 6423508
212 2874102822 2874102143 Bacteria 6342645
213 2876377320 2876369609 Bacteria 6807521
214 2876385783 2876377896 Bacteria 6565995
215 2876397456 2876392853 Bacteria 6660880
216 2881147764 2881147464 Bacteria 7779814
217 2904664210 2904659560 Bacteria 6685615
218 2906334410 2906328253 Bacteria 6585166
219 2922158833 2922158528 Bacteria 6573167
220 2924728847 2924726620 Bacteria 6271473
221 2937893426 2937891427 Bacteria 6357007
222 2958068151 2958064165 Bacteria 7158582
223 2958119539 2958115193 Bacteria 6923548
224 2961118650 2961114664 Bacteria 6680456
225 2965068647 2965062239 Bacteria 7412989
226 2968093966 2968091066 Bacteria 6052692
227 2968100555 2968097103 Bacteria 6107094
228 2968115349 2968110612 Bacteria 6814636
229 2968134242 2968128360 Bacteria 6270294
230 2977858295 2977858184 Bacteria 6215359
231 2977870756 2977864932 Bacteria 7534097
232 2979781888 2979779861 Bacteria 6219781
233 2996346480 2996341866 Bacteria 6643098
234 8004450452 8004445564 Bacteria 6322258
235 8004707124 8004703790 Bacteria 8006957
236 Ga0501031_0003129
237 JGI25165J46597_1000019
238 Ga0065704_10078560
239 Ga0070683_100004652
240 Ga0070683_100029596
241 Ga0070683_100037585
242 Ga0070670_100018479
243 Ga0070660_100009831
244 Ga0070673_100021419
245 Ga0070659_100019316
246 Ga0070659_100041149
247 Ga0070714_100020198
248 Ga0070714_100033360
249 Ga0070714_100041443
250 Ga0070713_100004218
251 Ga0070705_100013870
252 Ga0070708_100001742
253 Ga0070708_100014386
254 Ga0070708_100060632
255 Ga0070708_100098068
256 Ga0070663_100057196
257 Ga0070678_100032268
258 Ga0070681_10003440
259 Ga0070681_10017920
260 Ga0070681_10019907
261 Ga0070706_100022683
262 Ga0070707_100008703
263 Ga0070707_100019450
264 Ga0070707_100057852
265 Ga0070698_100081163
266 Ga0070698_100089580
267 Ga0070679_100019144
268 Ga0070679_100025659
269 Ga0070684_100006189
270 Ga0070697_100041755
271 Ga0068853_100056783
272 Ga0068855_100008224
273 Ga0068855_100098064
274 Ga0070664_100010701
275 Ga0068857_100008199
276 Ga0068857_100047891
277 Ga0068856_100002451
278 Ga0068856_100011702
279 Ga0081539_10006656
280 Ga0070717_10055973
281 Ga0097621_100001424
282 Ga0068871_100001749
283 Ga0075433_10012099
284 Ga0075434_100049617
285 Ga0105240_10021068
286 Ga0105240_10024557
287 Ga0105240_10034822
288 Ga0105240_10052081
289 Ga0105240_10071314
290 Ga0105240_10145729
291 Ga0111539_10076413
292 Ga0105238_10003086
293 Ga0105238_10037917
294 Ga0105238_10073458
295 Ga0105238_10131876
296 Ga0105249_10042667
297 Ga0105239_10001234
298 Ga0105239_10019212
299 Ga0105239_10074568
300 Ga0105239_10157209
301 Ga0157373_10044474
302 Ga0157370_10026157
303 Ga0157369_10005905
304 Ga0157369_10081860
305 Ga0157374_10000794
306 Ga0157374_10017215
307 Ga0157374_10026211
308 Ga0157378_10014768
309 Ga0157372_10002184
310 Ga0157372_10004244
311 Ga0157372_10026232
312 Ga0157372_10050440
313 Ga0163163_10056849
314 Ga0213876_10000792
315 Ga0213876_10010083
316 Ga0209233_1000034
317 Ga0207645_10002250
318 Ga0207645_10036594
319 Ga0207684_10015813
320 Ga0207684_10047158
321 Ga0207654_10048409
322 Ga0207707_10000894
323 Ga0207707_10007611
324 Ga0207707_10052494
325 Ga0207695_10024157
326 Ga0207695_10038441
327 Ga0207695_10070442
328 Ga0207695_10111833
329 Ga0207657_10001442
330 Ga0207657_10023277
331 Ga0207652_10008221
332 Ga0207652_10052237
333 Ga0207646_10003117
334 Ga0207646_10024312
335 Ga0207694_10072361
336 Ga0207650_10020500
337 Ga0207664_10073639
338 Ga0207706_10012695
339 Ga0207691_10020774
340 Ga0207661_10002685
341 Ga0207679_10007288
342 Ga0207667_10027321
343 Ga0207667_10073310
344 Ga0207651_10054828
345 Ga0207639_10021621
346 Ga0207708_10029550
347 Ga0207702_10003358
348 Ga0207702_10004822
349 Ga0207674_10001423
350 Ga0207674_10005207
351 Ga0207683_10002083
352 Ga0207683_10016096
353 Ga0207698_10067315
354 Ga0265338_10000622
355 Ga0265325_10001834
356 Ga0265339_10001427
357 Ga0265327_10000175
358 Ga0307408_100037408
359 Ga0265313_10000574
360 Ga0265314_10056875
361 Ga0307405_10036462
362 Ga0307410_10012760
363 Ga0307406_10005160
364 Ga0373925_0029869
365 Ga0373925_0038225
366 Ga0395900_0031636
367 Ga0436365_1298604
368 Ga0436365_1541037
369 Ga0436365_1542239
370 Ga0436365_1586327
371 Ga0436363_0340667
372 Ga0436362_0462201
373 Ga0466972_0004629
374 Ga0466965_0008773
375 Ga0466968_0001299
376 Ga0466957_0000065
377 Ga0466958_0036423
378 Ga0466967_0050205
379 Ga0496101_0031478
380 Ga0496102_0035057
381 Ga0496104_0017718
382 Ga0496106_0076897
383 Ga0496112_0009732
384 Ga0496112_0122924
385 Ga0496114_0018743
386 Ga0501292_000204
387 Ga0501296_000041
388 Ga0501297_000333
389 Ga0501300_000204
390 Ga0501303_000101
391 Ga0501031_0021909
392 Ga0501036_0021689
393 Ga0501037_0007303
394 Ga0501037_0025780
395 Ga0501037_0035578
396 Ga0501038_0031663
397 Ga0501039_0003540
398 Ga0501039_0004399
399 Ga0501039_0015894
400 Ga0501039_0018111
401 Ga0501041_0004515
402 Ga0501042_0001555
403 Ga0501046_0014706
404 Ga0501048_0005036
405 Ga0501076_0045270
406 Ga0501199_000061
407 Ga0501202_003451
408 Ga0501207_001519
409 Ga0501216_000321
410 Ga0501217_006506
411 Ga0501227_000441
412 Ga0501230_000243
413 Ga0501233_001579
414 Ga0501236_000501
415 Ga0501239_000179
416 Ga0501219_001565
417 Ga0501221_003915
418 Ga0501225_0002691
419 Ga0501234_000402
420 Ga0501245_000774
421 Ga0501264_000526
422 Ga0501269_002246
423 Ga0501270_000042
424 Ga0501272_000073
425 Ga0501273_000079
426 Ga0501274_000582
427 Ga0501279_000803
428 Ga0501282_000494
429 Ga0501283_002522
430 Ga0501204_000296
431 Ga0501212_000235
432 Ga0501226_000279
433 nmdc:mga0n895_1199_c1
434 nmdc:mga0rr50_26967_c1
435 nmdc:mga0a205_3286_c1
436 Ga0495612_0001378
437 Ga0495619_0022138
438 Ga0500608_000377
439 Ga0501084_0078333
440 2513609664
441 2599935600
442 2657684226
443 2804754188
444 2847689574
445 2869168638
446 2871446937
447 2874102822
448 2876377320
449 2876385783
450 2876397456
451 2881147764
452 2904664210
453 2906334410
454 2922158833
455 2924728847
456 2937893426
457 2958068151
458 2958119539
459 2961118650
460 2965068647
461 2968093966
462 2968100555
463 2968115349
464 2968134242
465 2977858295
466 2977870756
467 2979781888
468 2996346480
469 8004450452
470 8004707124

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14742

GDE_N_bis

N-terminal domain of (some) glycogen debranching enzymes

81

276

0.95

PF22422

MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

359

684

0.77

PF06202

GDE_C

Amylo-alpha-1,6-glucosidase

337

710

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.9105 35 729
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.9077 35 729
5fzq-assembly1.cif.gz_B designed tpr protein m4n 0.8349 475 510
3kd7-assembly1.cif.gz_A designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.8124 475 510
7qsj-assembly2.cif.gz_B methylmannose polysaccharide hydrolase mmph from m. hassiacum 0.769 283 674
ID Description Score Start End Superfamily
af_C4J723_93_162_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9789 481 512 1.25.40.10
af_Q5N719_75_151_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9752 481 510 1.25.40.10
af_I1MMJ3_632_690_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9656 481 512 1.25.40.10
af_Q9CB03_636_690_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9604 481 512 1.25.40.10
3mpsA01 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.9491 474 513 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A7V3BJH4-F1-model_v4 Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain-containing protein 0.9853 549 740 GO:0005975
AF-A0A531KVD8-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9821 307 600 GO:0005975
AF-A0A0K2QXN2-F1-model_v4 deleted 0.9821 437 606
AF-A0A519WUP7-F1-model_v4 deleted 0.9812 397 697
AF-A0A3M1PJX2-F1-model_v4 Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain-containing protein 0.981 308 741 GO:0005975

Map