F341419

General Info

Members Datasets Scaffolds Average Seq Length
228 153 456 386

Family's Representative Sequence

Representative Sequence 3300049579|Ga0501043_0128304|Ga0501043_0128304_73_1422
Length 449
Sequence LGLSLLPLRLYCLGLSRLRLLRVSGNGENERGQERRCGGDTKELRHSSILAPPPVNITRVTPLPTETARPALTRLSEDERLFMDSVYDFASREVAPLVREMDEHAKVAPALLRQLFDLGVMGIEIPEALGGAGGSFFHAVLAVEALSRVDPSIGVIVDVQNTLVINALLRWGSAEQRQRFLPRLASDTIGAYALSEAGSGSDAFALGTRAVRSGDGWLLTGRKLWITNANEAGVFIVFANANPEAGYRGITAFLLERDTEGFTVGRKEDKLGIRASSTCELILEECRVPSSHVLGEVGKGYRTAIETLNEGRIGIGAQMVGLAQGALDHAVRYTEERRQFGKAIAEFQAVQHQLARAATDVHAARLMVYEAARLRDAGEPFLTEAAMCKLVASEAAERVASLAVNLFGGYGFVKDYPVEKLYRDAKIGQIYEGTSNLQLQTIAKQLLKR

Samples

Sample ID Description Type Environment
1 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
94 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
100 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
101 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
102 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
121 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 1.75
Rhizosphere 96.05
Stem 0
Stem Tuber 0
Unclassified 2.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501043_0128304 3300049579 Bacteria 1988
2 rootH2_10037211 3300003320 Bacteria 2261
3 Ga0065712_10003455 3300005290 Bacteria 4253
4 Ga0065712_10013935 3300005290 Bacteria 2420
5 Ga0070658_10203044 3300005327 Bacteria 1673
6 Ga0070683_100162311 3300005329 Bacteria 2120
7 Ga0070683_100176857 3300005329 Bacteria 2026
8 Ga0070691_10000928 3300005341 Bacteria 11892
9 Ga0070668_100360262 3300005347 Bacteria 1233
10 Ga0070669_100215746 3300005353 Bacteria 1516
11 Ga0070673_100150441 3300005364 Bacteria 1971
12 Ga0070713_100002340 3300005436 Bacteria 12368
13 Ga0070700_100092669 3300005441 Bacteria 1975
14 Ga0070678_100002596 3300005456 Bacteria 9930
15 Ga0068867_100297188 3300005459 Bacteria 1330
16 Ga0070685_10048981 3300005466 Bacteria 2436
17 Ga0070698_100020876 3300005471 Bacteria 6864
18 Ga0070699_100168408 3300005518 Bacteria 1941
19 Ga0070679_100000611 3300005530 Bacteria 30391
20 Ga0070684_100001326 3300005535 Bacteria 17741
21 Ga0070684_100031645 3300005535 Unclassified 4506
22 Ga0070684_100335257 3300005535 Bacteria 1390
23 Ga0068853_100046423 3300005539 Bacteria 3724
24 Ga0070696_100009078 3300005546 Bacteria 6659
25 Ga0068855_100003564 3300005563 Bacteria 19033
26 Ga0068855_100003606 3300005563 Bacteria 18908
27 Ga0068857_100022551 3300005577 Bacteria 5539
28 Ga0068856_100019063 3300005614 Bacteria 6657
29 Ga0068856_100073758 3300005614 Unclassified 3379
30 Ga0068852_100179667 3300005616 Bacteria 1989
31 Ga0068859_100116310 3300005617 Bacteria 2739
32 Ga0068859_100139809 3300005617 Bacteria 2495
33 Ga0068851_10042159 3300005834 Bacteria 2297
34 Ga0068863_100088915 3300005841 Bacteria 2928
35 Ga0068858_100021142 3300005842 Bacteria 6077
36 Ga0068860_100032555 3300005843 Bacteria 5008
37 Ga0081539_10000725 3300005985 Bacteria 66076
38 Ga0070717_10088984 3300006028 Bacteria 2604
39 Ga0070717_10175014 3300006028 Bacteria 1868
40 Ga0070716_100108550 3300006173 Bacteria 1715
41 Ga0097621_100000128 3300006237 Bacteria 44263
42 Ga0097621_100039382 3300006237 Bacteria 3796
43 Ga0097621_100063397 3300006237 Bacteria 3037
44 Ga0068871_100007131 3300006358 Bacteria 7969
45 Ga0068871_100024112 3300006358 Bacteria 4715
46 Ga0068871_100224660 3300006358 Bacteria 1628
47 Ga0075428_100003915 3300006844 Bacteria 16361
48 Ga0075428_100037990 3300006844 Bacteria 5299
49 Ga0075431_100290060 3300006847 Bacteria 1655
50 Ga0075431_100389643 3300006847 Bacteria 1396
51 Ga0075434_100153987 3300006871 Bacteria 2319
52 Ga0068865_100114681 3300006881 Bacteria 1993
53 Ga0097620_100116310 3300006931 Bacteria 2739
54 Ga0097620_100139798 3300006931 Bacteria 2495
55 Ga0105240_10000456 3300009093 Bacteria 75321
56 Ga0105240_10027230 3300009093 Bacteria 7487
57 Ga0105240_10037995 3300009093 Bacteria 6181
58 Ga0105240_10428737 3300009093 Bacteria 1484
59 Ga0111539_10032097 3300009094 Bacteria 6379
60 Ga0105245_10004815 3300009098 Bacteria 11907
61 Ga0105245_10130544 3300009098 Bacteria 2356
62 Ga0114129_10005475 3300009147 Bacteria 17945
63 Ga0114129_10021897 3300009147 Bacteria 9072
64 Ga0114129_10166543 3300009147 Bacteria 3007
65 Ga0114129_10193197 3300009147 Bacteria 2762
66 Ga0105241_10084663 3300009174 Bacteria 2490
67 Ga0105242_10045569 3300009176 Bacteria 3554
68 Ga0105242_10163360 3300009176 Bacteria 1951
69 Ga0105248_10033945 3300009177 Bacteria 5702
70 Ga0105248_10071916 3300009177 Bacteria 3887
71 Ga0105248_10145372 3300009177 Bacteria 2676
72 Ga0105248_10166095 3300009177 Bacteria 2488
73 Ga0105248_10171127 3300009177 Bacteria 2448
74 Ga0105248_10279921 3300009177 Bacteria 1878
75 Ga0105237_10074050 3300009545 Bacteria 3397
76 Ga0105237_10187205 3300009545 Bacteria 2070
77 Ga0105238_10003861 3300009551 Bacteria 14883
78 Ga0105238_10047522 3300009551 Bacteria 4326
79 Ga0105249_10205698 3300009553 Bacteria 1929
80 Ga0105239_10002187 3300010375 Bacteria 25142
81 Ga0105239_10131828 3300010375 Bacteria 2781
82 Ga0105246_10014099 3300011119 Bacteria 5022
83 Ga0105246_10015166 3300011119 Bacteria 4861
84 Ga0157370_10007932 3300013104 Bacteria 11496
85 Ga0157369_10221942 3300013105 Bacteria 1978
86 Ga0157372_10012209 3300013307 Bacteria 9150
87 Ga0157372_10022295 3300013307 Bacteria 6851
88 Ga0157372_10090774 3300013307 Bacteria 3474
89 Ga0157375_10000960 3300013308 Bacteria 24949
90 Ga0163163_10063063 3300014325 Bacteria 3674
91 Ga0157379_10021609 3300014968 Bacteria 5699
92 Ga0157376_10048880 3300014969 Bacteria 3501
93 Ga0157376_10181197 3300014969 Bacteria 1926
94 Ga0207697_10043803 3300025315 Bacteria 1840
95 Ga0207682_10047982 3300025893 Bacteria 1760
96 Ga0207705_10202542 3300025909 Bacteria 1504
97 Ga0207695_10001377 3300025913 Bacteria 41152
98 Ga0207695_10030616 3300025913 Bacteria 5922
99 Ga0207663_10034906 3300025916 Bacteria 3012
100 Ga0207663_10182545 3300025916 Bacteria 1500
101 Ga0207657_10053622 3300025919 Bacteria 3492
102 Ga0207652_10052697 3300025921 Bacteria 3493
103 Ga0207694_10000227 3300025924 Bacteria 54475
104 Ga0207694_10007113 3300025924 Bacteria 8502
105 Ga0207687_10002329 3300025927 Bacteria 12936
106 Ga0207687_10035588 3300025927 Bacteria 3388
107 Ga0207700_10005038 3300025928 Bacteria 7859
108 Ga0207706_10121926 3300025933 Bacteria 2293
109 Ga0207686_10024018 3300025934 Bacteria 3526
110 Ga0207709_10037373 3300025935 Bacteria 2885
111 Ga0207704_10005512 3300025938 Bacteria 5835
112 Ga0207665_10081710 3300025939 Bacteria 2226
113 Ga0207665_10148620 3300025939 Bacteria 1676
114 Ga0207691_10193165 3300025940 Bacteria 1775
115 Ga0207691_10246517 3300025940 Bacteria 1543
116 Ga0207711_10004498 3300025941 Bacteria 11878
117 Ga0207711_10019300 3300025941 Bacteria 5677
118 Ga0207711_10039480 3300025941 Bacteria 4016
119 Ga0207711_10171285 3300025941 Bacteria 1970
120 Ga0207711_10388297 3300025941 Bacteria 1296
121 Ga0207661_10004004 3300025944 Bacteria 10298
122 Ga0207667_10002537 3300025949 Bacteria 22738
123 Ga0207667_10044210 3300025949 Bacteria 4721
124 Ga0207712_10039306 3300025961 Bacteria 3241
125 Ga0207703_10032235 3300026035 Bacteria 4147
126 Ga0207703_10038705 3300026035 Bacteria 3808
127 Ga0207703_10293413 3300026035 Bacteria 1481
128 Ga0207703_10344958 3300026035 Bacteria 1370
129 Ga0207639_10072161 3300026041 Bacteria 2703
130 Ga0207702_10050287 3300026078 Unclassified 3519
131 Ga0207648_10013774 3300026089 Bacteria 7502
132 Ga0207674_10009212 3300026116 Bacteria 11316
133 Ga0207674_10011423 3300026116 Bacteria 9979
134 Ga0207683_10091735 3300026121 Bacteria 2706
135 Ga0207698_10067718 3300026142 Bacteria 2816
136 Ga0209971_1006045 3300027682 Bacteria 2869
137 Ga0207428_10035136 3300027907 Bacteria 4098
138 Ga0268264_10049738 3300028381 Bacteria 3488
139 Ga0268264_10163509 3300028381 Bacteria 2007
140 Ga0268264_10226030 3300028381 Bacteria 1725
141 Ga0265332_10065848 3300031238 Bacteria 1547
142 Ga0265325_10005310 3300031241 Bacteria 7982
143 Ga0265313_10003811 3300031595 Bacteria 11920
144 Ga0265314_10002192 3300031711 Bacteria 20407
145 Ga0265314_10017104 3300031711 Bacteria 5701
146 Ga0265342_10023690 3300031712 Bacteria 3882
147 Ga0316576_10226966 3300031727 Bacteria 1404
148 Ga0307410_10086807 3300031852 Bacteria 2211
149 Ga0307410_10142969 3300031852 Unclassified 1772
150 Ga0307411_10062065 3300032005 Bacteria 2491
151 Ga0307415_100182517 3300032126 Bacteria 1648
152 Ga0307510_10007906 3300033180 Bacteria 12665
153 Ga0373959_0000033 3300034820 Bacteria 30368
154 Ga0373939_0059119 3300035114 Bacteria 1215
155 Ga0373953_0065799 3300035117 Bacteria 1489
156 Ga0373956_0037999 3300035119 Bacteria 2129
157 Ga0373956_0051208 3300035119 Bacteria 1856
158 Ga0373956_0111056 3300035119 Bacteria 1276
159 Ga0373946_0002099 3300035171 Bacteria 6996
160 Ga0373955_0087515 3300035172 Bacteria 1771
161 Ga0373924_0042895 3300035410 Bacteria 1857
162 Ga0373937_0032751 3300036401 Bacteria 4715
163 Ga0373937_0049991 3300036401 Bacteria 3829
164 Ga0373937_0064968 3300036401 Bacteria 3358
165 Ga0373937_0077784 3300036401 Bacteria 3066
166 Ga0373937_0096425 3300036401 Bacteria 2743
167 Ga0373925_0003320 3300037068 Bacteria 12506
168 Ga0373925_0005359 3300037068 Bacteria 9569
169 Ga0373925_0221007 3300037068 Bacteria 1512
170 Ga0436365_0293712 3300039437 Bacteria 1626
171 Ga0436365_0814386 3300039437 Bacteria 2022
172 Ga0451577_0020041 3300042876 Bacteria 6141
173 Ga0451576_0054756 3300045051 Bacteria 4176
174 Ga0451576_0359337 3300045051 Bacteria 1525
175 Ga0495592_0078772 3300046454 Bacteria 2386
176 Ga0495592_0216202 3300046454 Bacteria 1284
177 Ga0495629_0068890 3300046459 Bacteria 2469
178 Ga0495629_0108090 3300046459 Bacteria 1940
179 Ga0495608_0014392 3300046511 Bacteria 5488
180 Ga0495628_0025726 3300046516 Bacteria 4806
181 Ga0495630_0003567 3300046517 Bacteria 10837
182 Ga0495648_0023750 3300046524 Bacteria 4190
183 Ga0495648_0167669 3300046524 Bacteria 1129
184 Ga0495587_0148427 3300046536 Bacteria 1336
185 Ga0495645_0012698 3300046543 Bacteria 5941
186 Ga0495667_0053228 3300046559 Bacteria 2666
187 Ga0495634_0056153 3300046642 Bacteria 2632
188 Ga0495625_0020394 3300046660 Bacteria 5118
189 Ga0495658_0077663 3300046683 Bacteria 1942
190 Ga0495669_0005165 3300046684 Bacteria 5429
191 Ga0495613_0001592 3300046689 Bacteria 17199
192 Ga0495674_0070542 3300047319 Bacteria 3019
193 Ga0495674_0148087 3300047319 Unclassified 1970
194 Ga0495684_0005203 3300047471 Bacteria 10139
195 Ga0496108_0353493 3300048911 Bacteria 1282
196 Ga0496109_0405461 3300048912 Bacteria 1288
197 Ga0496110_0092592 3300048913 Bacteria 2705
198 Ga0496111_0088789 3300048914 Bacteria 2264
199 Ga0501034_0029901 3300049571 Bacteria 5537
200 Ga0501036_0022731 3300049572 Bacteria 5279
201 Ga0501039_0102671 3300049575 Bacteria 2232
202 Ga0501042_0119042 3300049578 Bacteria 1901
203 Ga0501047_0026975 3300049581 Bacteria 5532
204 Ga0501047_0237828 3300049581 Bacteria 1673
205 Ga0501071_0156848 3300049587 Bacteria 1700
206 Ga0501072_0118851 3300049588 Bacteria 2106
207 Ga0501073_0156638 3300049589 Bacteria 1578
208 Ga0501075_0012601 3300049591 Bacteria 6014
209 Ga0501075_0014467 3300049591 Bacteria 5654
210 Ga0501075_0016233 3300049591 Bacteria 5361
211 Ga0501076_0017691 3300049592 Bacteria 5419
212 Ga0501076_0145019 3300049592 Bacteria 1930
213 Ga0501079_0128992 3300049741 Bacteria 1968
214 Ga0501081_0268243 3300049743 Bacteria 1248
215 Ga0501044_0007000 3300049823 Bacteria 12407
216 nmdc:mga05p37_284773_c1 3300050507 Bacteria 1969
217 nmdc:mga05p37_291937_c1 3300050507 Bacteria 1941
218 nmdc:mga05p37_39575_c1 3300050507 Bacteria 5789
219 nmdc:mga06r32_207749_c1 3300050510 Bacteria 1946
220 nmdc:mga08y16_112358_c1 3300050511 Bacteria 2836
221 nmdc:mga0a205_64697_c1 3300050515 Bacteria 3533
222 Ga0495601_0002165 3300053077 Bacteria 11057
223 Ga0495595_0156571 3300053084 Bacteria 1123
224 Ga0495619_0102672 3300053085 Bacteria 1947
225 Ga0500651_0000012 3300053093 Bacteria 243306
226 Ga0501084_0165594 3300054114 Bacteria 1866
227 Ga0530510_0082043 3300061734 Bacteria 2348
228 Ga0530510_0107846 3300061734 Bacteria 2039
229 Ga0501043_0128304
230 rootH2_10037211
231 Ga0065712_10003455
232 Ga0065712_10013935
233 Ga0070658_10203044
234 Ga0070683_100162311
235 Ga0070683_100176857
236 Ga0070691_10000928
237 Ga0070668_100360262
238 Ga0070669_100215746
239 Ga0070673_100150441
240 Ga0070713_100002340
241 Ga0070700_100092669
242 Ga0070678_100002596
243 Ga0068867_100297188
244 Ga0070685_10048981
245 Ga0070698_100020876
246 Ga0070699_100168408
247 Ga0070679_100000611
248 Ga0070684_100001326
249 Ga0070684_100031645
250 Ga0070684_100335257
251 Ga0068853_100046423
252 Ga0070696_100009078
253 Ga0068855_100003564
254 Ga0068855_100003606
255 Ga0068857_100022551
256 Ga0068856_100019063
257 Ga0068856_100073758
258 Ga0068852_100179667
259 Ga0068859_100116310
260 Ga0068859_100139809
261 Ga0068851_10042159
262 Ga0068863_100088915
263 Ga0068858_100021142
264 Ga0068860_100032555
265 Ga0081539_10000725
266 Ga0070717_10088984
267 Ga0070717_10175014
268 Ga0070716_100108550
269 Ga0097621_100000128
270 Ga0097621_100039382
271 Ga0097621_100063397
272 Ga0068871_100007131
273 Ga0068871_100024112
274 Ga0068871_100224660
275 Ga0075428_100003915
276 Ga0075428_100037990
277 Ga0075431_100290060
278 Ga0075431_100389643
279 Ga0075434_100153987
280 Ga0068865_100114681
281 Ga0097620_100116310
282 Ga0097620_100139798
283 Ga0105240_10000456
284 Ga0105240_10027230
285 Ga0105240_10037995
286 Ga0105240_10428737
287 Ga0111539_10032097
288 Ga0105245_10004815
289 Ga0105245_10130544
290 Ga0114129_10005475
291 Ga0114129_10021897
292 Ga0114129_10166543
293 Ga0114129_10193197
294 Ga0105241_10084663
295 Ga0105242_10045569
296 Ga0105242_10163360
297 Ga0105248_10033945
298 Ga0105248_10071916
299 Ga0105248_10145372
300 Ga0105248_10166095
301 Ga0105248_10171127
302 Ga0105248_10279921
303 Ga0105237_10074050
304 Ga0105237_10187205
305 Ga0105238_10003861
306 Ga0105238_10047522
307 Ga0105249_10205698
308 Ga0105239_10002187
309 Ga0105239_10131828
310 Ga0105246_10014099
311 Ga0105246_10015166
312 Ga0157370_10007932
313 Ga0157369_10221942
314 Ga0157372_10012209
315 Ga0157372_10022295
316 Ga0157372_10090774
317 Ga0157375_10000960
318 Ga0163163_10063063
319 Ga0157379_10021609
320 Ga0157376_10048880
321 Ga0157376_10181197
322 Ga0207697_10043803
323 Ga0207682_10047982
324 Ga0207705_10202542
325 Ga0207695_10001377
326 Ga0207695_10030616
327 Ga0207663_10034906
328 Ga0207663_10182545
329 Ga0207657_10053622
330 Ga0207652_10052697
331 Ga0207694_10000227
332 Ga0207694_10007113
333 Ga0207687_10002329
334 Ga0207687_10035588
335 Ga0207700_10005038
336 Ga0207706_10121926
337 Ga0207686_10024018
338 Ga0207709_10037373
339 Ga0207704_10005512
340 Ga0207665_10081710
341 Ga0207665_10148620
342 Ga0207691_10193165
343 Ga0207691_10246517
344 Ga0207711_10004498
345 Ga0207711_10019300
346 Ga0207711_10039480
347 Ga0207711_10171285
348 Ga0207711_10388297
349 Ga0207661_10004004
350 Ga0207667_10002537
351 Ga0207667_10044210
352 Ga0207712_10039306
353 Ga0207703_10032235
354 Ga0207703_10038705
355 Ga0207703_10293413
356 Ga0207703_10344958
357 Ga0207639_10072161
358 Ga0207702_10050287
359 Ga0207648_10013774
360 Ga0207674_10009212
361 Ga0207674_10011423
362 Ga0207683_10091735
363 Ga0207698_10067718
364 Ga0209971_1006045
365 Ga0207428_10035136
366 Ga0268264_10049738
367 Ga0268264_10163509
368 Ga0268264_10226030
369 Ga0265332_10065848
370 Ga0265325_10005310
371 Ga0265313_10003811
372 Ga0265314_10002192
373 Ga0265314_10017104
374 Ga0265342_10023690
375 Ga0316576_10226966
376 Ga0307410_10086807
377 Ga0307410_10142969
378 Ga0307411_10062065
379 Ga0307415_100182517
380 Ga0307510_10007906
381 Ga0373959_0000033
382 Ga0373939_0059119
383 Ga0373953_0065799
384 Ga0373956_0037999
385 Ga0373956_0051208
386 Ga0373956_0111056
387 Ga0373946_0002099
388 Ga0373955_0087515
389 Ga0373924_0042895
390 Ga0373937_0032751
391 Ga0373937_0049991
392 Ga0373937_0064968
393 Ga0373937_0077784
394 Ga0373937_0096425
395 Ga0373925_0003320
396 Ga0373925_0005359
397 Ga0373925_0221007
398 Ga0436365_0293712
399 Ga0436365_0814386
400 Ga0451577_0020041
401 Ga0451576_0054756
402 Ga0451576_0359337
403 Ga0495592_0078772
404 Ga0495592_0216202
405 Ga0495629_0068890
406 Ga0495629_0108090
407 Ga0495608_0014392
408 Ga0495628_0025726
409 Ga0495630_0003567
410 Ga0495648_0023750
411 Ga0495648_0167669
412 Ga0495587_0148427
413 Ga0495645_0012698
414 Ga0495667_0053228
415 Ga0495634_0056153
416 Ga0495625_0020394
417 Ga0495658_0077663
418 Ga0495669_0005165
419 Ga0495613_0001592
420 Ga0495674_0070542
421 Ga0495674_0148087
422 Ga0495684_0005203
423 Ga0496108_0353493
424 Ga0496109_0405461
425 Ga0496110_0092592
426 Ga0496111_0088789
427 Ga0501034_0029901
428 Ga0501036_0022731
429 Ga0501039_0102671
430 Ga0501042_0119042
431 Ga0501047_0026975
432 Ga0501047_0237828
433 Ga0501071_0156848
434 Ga0501072_0118851
435 Ga0501073_0156638
436 Ga0501075_0012601
437 Ga0501075_0014467
438 Ga0501075_0016233
439 Ga0501076_0017691
440 Ga0501076_0145019
441 Ga0501079_0128992
442 Ga0501081_0268243
443 Ga0501044_0007000
444 nmdc:mga05p37_284773_c1
445 nmdc:mga05p37_291937_c1
446 nmdc:mga05p37_39575_c1
447 nmdc:mga06r32_207749_c1
448 nmdc:mga08y16_112358_c1
449 nmdc:mga0a205_64697_c1
450 Ga0495601_0002165
451 Ga0495595_0156571
452 Ga0495619_0102672
453 Ga0500651_0000012
454 Ga0501084_0165594
455 Ga0530510_0082043
456 Ga0530510_0107846

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

298

447

0.99

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

76

188

0.98

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

313

436

0.98

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

191

286

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jif-assembly1.cif.gz_D structure of human short-branched chain acyl-coa dehydrogenase (acadsb) 0.9827 5 380
5ol2-assembly2.cif.gz_F the electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile 0.9823 10 381
4l1f-assembly1.cif.gz_A electron transferring flavoprotein of acidaminococcus fermentans: towards a mechanism of flavin-based electron bifurcation 0.9812 8 381
1jqi-assembly1.cif.gz_B crystal structure of rat short chain acyl-coa dehydrogenase complexed with acetoacetyl-coa 0.9781 8 380
4n5f-assembly1.cif.gz_A-2 crystal structure of a putative acyl-coa dehydrogenase with bound fadh2 from burkholderia cenocepacia j2315 0.9775 9 379
ID Description Score Start End Superfamily
af_I6Y0W5_249_394_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9917 239 380 1.20.140.10
1bucB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9914 243 380 1.20.140.10
af_Q6AXI7_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9891 238 380 1.20.140.10
1jqiB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9886 243 380 1.20.140.10
6fahD03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9886 243 381 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A2N2FR64-F1-model_v4 Acyl-CoA dehydrogenase 0.9948 252 380 GO:0003995
AF-A0A2G8K828-F1-model_v4 Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) (2-methyl branched chain acyl-CoA dehydrogenase) (2-methylbutyryl-coenzyme A dehydrogenase) 0.9898 5 177 GO:0003995
GO:0005739
GO:0006631
GO:0050660
AF-A0A7S3K3H5-F1-model_v4 Acyl-CoA dehydrogenase 0.9886 9 380 GO:0003995
GO:0005739
GO:0006631
GO:0050660
AF-G4ZI63-F1-model_v4 short-chain 2-methylacyl-CoA dehydrogenase (EC 1.3.8.5) 0.9876 2 380 GO:0003995
GO:0005739
GO:0006631
GO:0050660
AF-A0A5J6SGM7-F1-model_v4 Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (EC 1.3.8.5) (2-methyl branched chain acyl-CoA dehydrogenase) (2-methylbutyryl-coenzyme A dehydrogenase) 0.9872 1 380 GO:0003995
GO:0005739
GO:0006631
GO:0050660

Map