F339176

General Info

Members Datasets Scaffolds Average Seq Length
226 164 211 334

Family's Representative Sequence

Representative Sequence 3300046500|Ga0495596_0005447|Ga0495596_0005447_4139_5215
Length 358
Sequence VPIGTEGDTMQQTGLSTAFSAPFALGSFSVAGGKRFGGLVIGERVIALDALKDIARANGLVLAGTDSVFELLQDWHANFAVVQAILEQVKRDKEEVFAPLSALKVHAPVDLPRQIFCTGANYYRHVVQLLVDQGAGANPGTENMTPEELYQYAHKVMNERARTGSPYVFSKVPSAVTGPYDPIVLPAIAEKPDWELELAVVIGKAARHVSREQALDYVAGYTIANDITSRDLIWCKDPKAMGTDWTSSKNAPTFLPLGPYVVPAAFVADPQNLRIHLSLNGETKQDDRTSDMLFDIARQIEYISSRAQLWPGDIICTGSPAGNGTHYNRFLQDGDVVDGAIEGLGAQRNRCVAERTNA

Samples

Sample ID Description Type Environment
1 2124908027 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v1 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 2511231008 Pseudomonas sp. GM21 Isolate Nodule
4 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
5 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
6 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
7 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
8 2818991450 Burkholderia sp. 604 Isolate Unclassified
9 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
10 2928070936 Variovorax gossypii 1167 Isolate Unclassified
11 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
12 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
13 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
43 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
44 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
45 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
55 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
80 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
81 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
82 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
85 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
86 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
87 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
88 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
89 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
93 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
94 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
99 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
120 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
121 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
124 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
127 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
135 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
136 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
157 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
163 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
164 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.36
Metatranscriptomes 0
Isolates 6.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.04
Nodule 2.65
Rhizoplane 2.21
Rhizosphere 69.91
Stem 0
Stem Tuber 0
Unclassified 10.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS2a_Contig_1752 2124908027 Bacteria 35744
2 MRS2a_Contig_9023 2124908027 Bacteria 13664
3 MRS1b_contig_1384097 2162886011 Unclassified 2432
4 JGI24735J21928_10000349 3300002067 Bacteria 16109
5 Ga0055537_1000184 3300003773 Bacteria 46494
6 Ga0055536_1000127 3300003781 Bacteria 65326
7 Ga0055534_1000014 3300003784 Bacteria 150629
8 Ga0055528_1003341 3300003790 Bacteria 8125
9 Ga0055530_10002236 3300003791 Bacteria 12738
10 Ga0055540_1000078 3300003792 Bacteria 114243
11 Ga0055531_10000034 3300003794 Bacteria 150210
12 Ga0065714_10001088 3300005288 Bacteria 7210
13 Ga0065714_10107568 3300005288 Bacteria 1529
14 Ga0065704_10073272 3300005289 Bacteria 7368
15 Ga0065712_10080479 3300005290 Unclassified 3101
16 Ga0070676_10078056 3300005328 Unclassified 2002
17 Ga0068868_100295107 3300005338 Bacteria 1375
18 Ga0070673_100208439 3300005364 Bacteria 1687
19 Ga0070708_100071030 3300005445 Bacteria 3133
20 Ga0070706_100062694 3300005467 Bacteria 3435
21 Ga0070706_100180043 3300005467 Bacteria 1973
22 Ga0070707_100007455 3300005468 Bacteria 10158
23 Ga0070698_100009725 3300005471 Bacteria 10279
24 Ga0070697_100008166 3300005536 Bacteria 8171
25 Ga0068860_100000513 3300005843 Bacteria 47736
26 Ga0068862_100143168 3300005844 Bacteria 2123
27 Ga0070717_10001729 3300006028 Bacteria 15238
28 Ga0075363_100023895 3300006048 Bacteria 3103
29 Ga0075364_10131226 3300006051 Bacteria 1681
30 Ga0075362_10028802 3300006177 Bacteria 2388
31 Ga0075366_10004132 3300006195 Bacteria 7769
32 Ga0075366_10075048 3300006195 Bacteria 2017
33 Ga0075366_10093585 3300006195 Bacteria 1801
34 Ga0075370_10014555 3300006353 Bacteria 4199
35 Ga0075431_100140111 3300006847 Bacteria 2493
36 Ga0099826_10000173 3300006948 Bacteria 27163
37 Ga0105251_10000043 3300009011 Bacteria 113848
38 Ga0105251_10000112 3300009011 Bacteria 80692
39 Ga0105251_10000287 3300009011 Bacteria 50861
40 Ga0105251_10003954 3300009011 Bacteria 10510
41 Ga0105251_10045785 3300009011 Bacteria 2108
42 Ga0105244_10006453 3300009036 Bacteria 7590
43 Ga0105244_10010649 3300009036 Bacteria 5561
44 Ga0105244_10011062 3300009036 Bacteria 5436
45 Ga0105250_10007225 3300009092 Bacteria 4783
46 Ga0105250_10028308 3300009092 Unclassified 2257
47 Ga0105240_10000052 3300009093 Bacteria 232583
48 Ga0105243_10004617 3300009148 Bacteria 10861
49 Ga0105239_10166130 3300010375 Bacteria 2468
50 Ga0157371_10000162 3300013102 Bacteria 98237
51 Ga0157370_10002476 3300013104 Bacteria 22268
52 Ga0157369_10037025 3300013105 Bacteria 5344
53 Ga0182008_10000610 3300014497 Bacteria 26310
54 Ga0182008_10000984 3300014497 Bacteria 19787
55 Ga0182008_10043344 3300014497 Bacteria 2240
56 Ga0182006_1000199 3300015261 Bacteria 61642
57 Ga0182006_1000596 3300015261 Bacteria 26390
58 Ga0182006_1011849 3300015261 Bacteria 3821
59 Ga0182007_10000222 3300015262 Bacteria 38190
60 Ga0182007_10000480 3300015262 Bacteria 24037
61 Ga0182005_1000086 3300015265 Bacteria 70203
62 Ga0163161_10004853 3300017792 Bacteria 9362
63 Ga0163161_10005589 3300017792 Bacteria 8715
64 Ga0163161_10031090 3300017792 Bacteria 3802
65 Ga0209565_1000047 3300025263 Bacteria 225745
66 Ga0209673_1000079 3300025273 Bacteria 225746
67 Ga0209673_1008934 3300025273 Bacteria 4402
68 Ga0209675_1000046 3300025291 Bacteria 225746
69 Ga0209676_1000124 3300025292 Bacteria 194206
70 Ga0209676_1018318 3300025292 Bacteria 2446
71 Ga0209050_1000252 3300025298 Bacteria 115215
72 Ga0209051_1000167 3300025303 Bacteria 119475
73 Ga0209257_1000276 3300025304 Bacteria 116802
74 Ga0207696_1000018 3300025711 Bacteria 478605
75 Ga0207696_1003557 3300025711 Bacteria 7038
76 Ga0207713_1000087 3300025735 Bacteria 157009
77 Ga0207713_1000140 3300025735 Bacteria 108600
78 Ga0207713_1002089 3300025735 Bacteria 14902
79 Ga0207713_1005202 3300025735 Bacteria 8212
80 Ga0207713_1049431 3300025735 Bacteria 1686
81 Ga0207645_10036610 3300025907 Bacteria 3151
82 Ga0207684_10004134 3300025910 Bacteria 13820
83 Ga0207695_10000122 3300025913 Bacteria 232677
84 Ga0207646_10016204 3300025922 Bacteria 7003
85 Ga0207644_10184024 3300025931 Bacteria 1639
86 Ga0207706_10027589 3300025933 Bacteria 5076
87 Ga0207658_10052427 3300025986 Bacteria 3010
88 Ga0207674_10113177 3300026116 Bacteria 2687
89 Ga0207683_10202375 3300026121 Bacteria 1805
90 Ga0209282_1000285 3300027666 Bacteria 25106
91 Ga0268265_10180452 3300028380 Bacteria 1813
92 Ga0268264_10000119 3300028381 Bacteria 192507
93 Ga0373931_0041652 3300035691 Bacteria 2413
94 Ga0439438_000028 3300041405 Bacteria 85791
95 Ga0439447_000012 3300041407 Bacteria 72724
96 Ga0439466_0000019 3300041411 Bacteria 98651
97 Ga0451793_1834391 3300041452 Unclassified 1212
98 Ga0451853_2167083 3300041512 Bacteria 1219
99 Ga0450890_013577 3300042127 Bacteria 1064
100 Ga0450907_000611 3300042146 Bacteria 9480
101 Ga0450910_000056 3300042147 Bacteria 11868
102 Ga0439446_0003106 3300042156 Bacteria 4081
103 Ga0450908_000004 3300042184 Bacteria 72969
104 Ga0450916_010847 3300042530 Bacteria 1145
105 Ga0466965_0266041 3300044683 Bacteria 922
106 Ga0466961_0000423 3300044693 Bacteria 27018
107 Ga0466968_0061311 3300044735 Bacteria 1622
108 Ga0495590_0014673 3300046457 Bacteria 2857
109 Ga0495591_000069 3300046458 Bacteria 117122
110 Ga0495638_0023209 3300046460 Bacteria 4062
111 Ga0495653_0015681 3300046463 Bacteria 6177
112 Ga0495650_0000228 3300046471 Bacteria 114154
113 Ga0495605_0000195 3300046474 Bacteria 75899
114 Ga0495605_0001471 3300046474 Bacteria 15385
115 Ga0495584_0000464 3300046491 Bacteria 27902
116 Ga0495585_0024381 3300046492 Bacteria 3469
117 Ga0495596_0000177 3300046500 Bacteria 44496
118 Ga0495596_0005447 3300046500 Bacteria 6013
119 Ga0495583_0004117 3300046506 Bacteria 10659
120 Ga0495606_0000023 3300046507 Bacteria 265019
121 Ga0495606_0003091 3300046507 Bacteria 18131
122 Ga0495606_0019306 3300046507 Bacteria 5077
123 Ga0495606_0029743 3300046507 Bacteria 3828
124 Ga0495610_0001858 3300046512 Bacteria 18302
125 Ga0495610_0008836 3300046512 Bacteria 6460
126 Ga0495610_0013728 3300046512 Bacteria 4796
127 Ga0495616_0000912 3300046513 Bacteria 21280
128 Ga0495616_0010418 3300046513 Bacteria 5381
129 Ga0495616_0014096 3300046513 Bacteria 4487
130 Ga0495628_0020205 3300046516 Bacteria 5496
131 Ga0495631_0031766 3300046518 Bacteria 2384
132 Ga0495632_0000031 3300046519 Bacteria 166613
133 Ga0495632_0006970 3300046519 Bacteria 7174
134 Ga0495637_0000178 3300046520 Bacteria 49292
135 Ga0495637_0000250 3300046520 Bacteria 42422
136 Ga0495637_0002518 3300046520 Bacteria 10109
137 Ga0495643_0000143 3300046522 Bacteria 114897
138 Ga0495643_0000504 3300046522 Bacteria 48931
139 Ga0495643_0023697 3300046522 Bacteria 3487
140 Ga0495643_0042786 3300046522 Bacteria 2466
141 Ga0495644_0077682 3300046523 Unclassified 1251
142 Ga0495654_0002567 3300046530 Bacteria 11614
143 Ga0495654_0121914 3300046530 Bacteria 1179
144 Ga0495597_0009921 3300046542 Bacteria 4681
145 Ga0495597_0030200 3300046542 Unclassified 2471
146 Ga0495633_0012578 3300046558 Bacteria 4492
147 Ga0495656_0000967 3300046615 Bacteria 9285
148 Ga0495668_0011580 3300046616 Bacteria 5274
149 Ga0495611_0000188 3300046648 Bacteria 44182
150 Ga0495625_0003265 3300046660 Bacteria 16392
151 Ga0495635_0072263 3300046663 Bacteria 2364
152 Ga0495659_0073544 3300046664 Bacteria 1285
153 Ga0495661_0001412 3300046665 Bacteria 20103
154 Ga0495661_0018650 3300046665 Bacteria 4557
155 Ga0495624_0000946 3300046690 Bacteria 22887
156 Ga0495670_0002912 3300046691 Bacteria 8433
157 Ga0495671_0000097 3300046692 Bacteria 80788
158 Ga0495671_0018021 3300046692 Bacteria 3755
159 Ga0495671_0018364 3300046692 Plasmid 3713
160 Ga0495649_0000087 3300046694 Bacteria 79929
161 Ga0495649_0002400 3300046694 Bacteria 13235
162 Ga0495589_0000149 3300046794 Bacteria 64489
163 Ga0495589_0023731 3300046794 Bacteria 3123
164 Ga0495660_0094984 3300046810 Unclassified 1543
165 Ga0495604_0000777 3300047317 Bacteria 26828
166 Ga0495674_0001597 3300047319 Bacteria 22232
167 Ga0495674_0039696 3300047319 Bacteria 4217
168 Ga0495676_0000643 3300047321 Bacteria 28962
169 Ga0495680_0014210 3300047322 Bacteria 6906
170 Ga0495683_0000432 3300047323 Bacteria 33198
171 Ga0495687_003723 3300047443 Bacteria 10818
172 Ga0495677_0029890 3300047445 Bacteria 1982
173 Ga0495673_0045062 3300047469 Unclassified 1963
174 Ga0495681_0043087 3300047470 Bacteria 2179
175 Ga0495686_0035214 3300047472 Bacteria 3220
176 Ga0495602_0028318 3300048088 Bacteria 5364
177 Ga0495626_0000035 3300048091 Bacteria 180770
178 Ga0496102_0192615 3300048905 Bacteria 1921
179 Ga0496105_0346616 3300048908 Bacteria 1187
180 Ga0496109_0200735 3300048912 Bacteria 1875
181 Ga0496110_0008637 3300048913 Bacteria 8206
182 Ga0496116_0066312 3300048919 Bacteria 2311
183 Ga0496117_0000125 3300048920 Bacteria 168885
184 Ga0496117_0024775 3300048920 Bacteria 4733
185 Ga0496117_0048328 3300048920 Bacteria 3041
186 Ga0496118_0000016 3300048921 Bacteria 549586
187 Ga0496118_0001274 3300048921 Bacteria 38638
188 Ga0496118_0011746 3300048921 Bacteria 8511
189 Ga0496121_0030920 3300048924 Bacteria 4907
190 Ga0496121_0056566 3300048924 Unclassified 3257
191 Ga0496121_0161175 3300048924 Bacteria 1640
192 Ga0496124_0064391 3300048927 Bacteria 3060
193 Ga0496125_0060656 3300048928 Unclassified 3038
194 Ga0496126_0031629 3300048929 Bacteria 4994
195 Ga0495678_000177 3300049459 Bacteria 73172
196 Ga0501036_0057830 3300049572 Bacteria 3285
197 Ga0501043_0033137 3300049579 Bacteria 4064
198 Ga0501046_0039648 3300049580 Bacteria 3770
199 Ga0501047_0000529 3300049581 Bacteria 41272
200 nmdc:mga03683_117267_c1 3300050489 Bacteria 1181
201 nmdc:mga03683_9821_c1 3300050489 Bacteria 1871
202 nmdc:mga03n38_38560_c1 3300050490 Bacteria 2067
203 nmdc:mga0yw44_75833_c1 3300050492 Bacteria 2098
204 nmdc:mga0k408_155740_c1 3300050493 Bacteria 1361
205 nmdc:mga0k408_34005_c1 3300050493 Bacteria 2917
206 nmdc:mga0k408_5827_c1 3300050493 Bacteria 6565
207 nmdc:mga0k408_81027_c1 3300050493 Bacteria 1900
208 nmdc:mga07m45_1628_c1 3300050496 Bacteria 6557
209 nmdc:mga07m45_82784_c1 3300050496 Bacteria 1095
210 nmdc:mga07m45_975_c1 3300050496 Bacteria 12588
211 nmdc:mga06r32_25041_c1 3300050510 Bacteria 5545

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044683 Ga0466965_0266041 Ga0466965_0266041_29_859 269
2 iso_pu_bacteria 8006973647 8006978621 278
3 3300041452 Ga0451793_1834391 Ga0451793_1834391_31_879 280
4 3300026121 Ga0207683_10202375 Ga0207683_102023752 282
5 3300050496 nmdc:mga07m45_82784_c1 nmdc:mga07m45_82784_c1_65_931 282
6 3300042530 Ga0450916_010847 Ga0450916_010847_150_1118 284
7 iso_pu_bacteria 2524023228 2524541620 285
8 iso_pu_bacteria 8006933436 8006934027 285
9 3300046522 Ga0495643_0023697 Ga0495643_0023697_2574_3473 287
10 iso_pu_bacteria 2900634093 2900641871 302
11 iso_pu_bacteria 2900634093 2900643302 302
12 3300005288 Ga0065714_10107568 Ga0065714_101075682 304
13 3300017792 Ga0163161_10005589 Ga0163161_100055898 304
14 3300046507 Ga0495606_0000023 Ga0495606_0000023_149983_150963 304
15 3300046694 Ga0495649_0000087 Ga0495649_0000087_45029_46009 304
16 3300048908 Ga0496105_0346616 Ga0496105_0346616_33_1028 304
17 3300014497 Ga0182008_10000984 Ga0182008_100009845 305
18 3300050489 nmdc:mga03683_9821_c1 nmdc:mga03683_9821_c1_476_1429 305
19 3300047319 Ga0495674_0039696 Ga0495674_0039696_1352_2284 306
20 iso_pu_bacteria 2928108538 2928110337 313
21 iso_pu_bacteria 2928135762 2928138529 313
22 iso_pu_bacteria 2928503688 2928505409 313
23 3300046507 Ga0495606_0029743 Ga0495606_0029743_2239_3219 315
24 3300006847 Ga0075431_100140111 Ga0075431_1001401112 316
25 3300046458 Ga0495591_000069 Ga0495591_000069_37254_38252 316
26 3300050510 nmdc:mga06r32_25041_c1 nmdc:mga06r32_25041_c1_1575_2558 316
27 3300049572 Ga0501036_0057830 Ga0501036_0057830_845_1876 317
28 3300049579 Ga0501043_0033137 Ga0501043_0033137_2047_3078 317
29 3300049580 Ga0501046_0039648 Ga0501046_0039648_1142_2173 317
30 3300049581 Ga0501047_0000529 Ga0501047_0000529_2044_3075 317
31 3300046463 Ga0495653_0015681 Ga0495653_0015681_4785_5753 318
32 3300046512 Ga0495610_0008836 Ga0495610_0008836_1332_2300 318
33 3300046516 Ga0495628_0020205 Ga0495628_0020205_3773_4741 318
34 3300046663 Ga0495635_0072263 Ga0495635_0072263_996_1964 318
35 3300046690 Ga0495624_0000946 Ga0495624_0000946_4758_5726 318
36 3300047317 Ga0495604_0000777 Ga0495604_0000777_20417_21385 318
37 3300047319 Ga0495674_0001597 Ga0495674_0001597_4590_5558 318
38 3300047321 Ga0495676_0000643 Ga0495676_0000643_23281_24249 318
39 3300047322 Ga0495680_0014210 Ga0495680_0014210_4158_5126 318
40 3300048088 Ga0495602_0028318 Ga0495602_0028318_4174_5142 318
41 3300044735 Ga0466968_0061311 Ga0466968_0061311_489_1547 319
42 iso_pu_bacteria 2928070936 2928078048 319
43 3300005328 Ga0070676_10078056 Ga0070676_100780562 321
44 3300005338 Ga0068868_100295107 Ga0068868_1002951071 321
45 3300005364 Ga0070673_100208439 Ga0070673_1002084391 321
46 3300025907 Ga0207645_10036610 Ga0207645_100366102 321
47 3300025931 Ga0207644_10184024 Ga0207644_101840242 321
48 3300025986 Ga0207658_10052427 Ga0207658_100524273 321
49 3300026116 Ga0207674_10113177 Ga0207674_101131773 321
50 3300041512 Ga0451853_2167083 Ga0451853_2167083_73_1068 321
51 3300042127 Ga0450890_013577 Ga0450890_013577_41_1030 321
52 3300042156 Ga0439446_0003106 Ga0439446_0003106_478_1467 321
53 3300006195 Ga0075366_10004132 Ga0075366_100041326 322
54 3300014497 Ga0182008_10000610 Ga0182008_1000061011 322
55 3300015261 Ga0182006_1000596 Ga0182006_100059620 322
56 3300015262 Ga0182007_10000222 Ga0182007_1000022224 322
57 3300050493 nmdc:mga0k408_5827_c1 nmdc:mga0k408_5827_c1_144_1178 322
58 3300050493 nmdc:mga0k408_81027_c1 nmdc:mga0k408_81027_c1_804_1838 322
59 3300050496 nmdc:mga07m45_975_c1 nmdc:mga07m45_975_c1_7951_8985 322
60 3300003781 Ga0055536_1000127 Ga0055536_100012736 323
61 3300003791 Ga0055530_10002236 Ga0055530_100022363 323
62 3300003792 Ga0055540_1000078 Ga0055540_100007892 323
63 3300003794 Ga0055531_10000034 Ga0055531_1000003468 323
64 3300006177 Ga0075362_10028802 Ga0075362_100288022 323
65 3300009011 Ga0105251_10000112 Ga0105251_1000011248 323
66 3300017792 Ga0163161_10004853 Ga0163161_1000485310 323
67 3300025292 Ga0209676_1000124 Ga0209676_100012437 323
68 3300025304 Ga0209257_1000276 Ga0209257_100027666 323
69 3300025735 Ga0207713_1000087 Ga0207713_100008791 323
70 3300025933 Ga0207706_10027589 Ga0207706_100275892 323
71 3300046492 Ga0495585_0024381 Ga0495585_0024381_57_1094 323
72 3300046500 Ga0495596_0000177 Ga0495596_0000177_39765_40802 323
73 3300046513 Ga0495616_0000912 Ga0495616_0000912_4787_5824 323
74 3300046513 Ga0495616_0010418 Ga0495616_0010418_3022_4059 323
75 3300046518 Ga0495631_0031766 Ga0495631_0031766_921_1958 323
76 3300046522 Ga0495643_0000504 Ga0495643_0000504_11045_12043 323
77 3300046530 Ga0495654_0121914 Ga0495654_0121914_72_1109 323
78 3300046615 Ga0495656_0000967 Ga0495656_0000967_2804_3811 323
79 3300046616 Ga0495668_0011580 Ga0495668_0011580_2682_3719 323
80 3300046665 Ga0495661_0018650 Ga0495661_0018650_1309_2346 323
81 3300046691 Ga0495670_0002912 Ga0495670_0002912_5145_6182 323
82 3300046692 Ga0495671_0018021 Ga0495671_0018021_2684_3721 323
83 3300047443 Ga0495687_003723 Ga0495687_003723_6158_7195 323
84 3300047445 Ga0495677_0029890 Ga0495677_0029890_199_1236 323
85 3300047472 Ga0495686_0035214 Ga0495686_0035214_1201_2238 323
86 3300048091 Ga0495626_0000035 Ga0495626_0000035_118809_119846 323
87 3300048905 Ga0496102_0192615 Ga0496102_0192615_151_1221 323
88 3300048920 Ga0496117_0000125 Ga0496117_0000125_132823_133893 323
89 3300048921 Ga0496118_0000016 Ga0496118_0000016_206192_207262 323
90 3300048924 Ga0496121_0030920 Ga0496121_0030920_2015_3022 323
91 3300048924 Ga0496121_0056566 Ga0496121_0056566_1109_2179 323
92 3300048927 Ga0496124_0064391 Ga0496124_0064391_1836_2906 323
93 3300048928 Ga0496125_0060656 Ga0496125_0060656_1050_2120 323
94 3300048929 Ga0496126_0031629 Ga0496126_0031629_1631_2701 323
95 3300049459 Ga0495678_000177 Ga0495678_000177_12799_13836 323
96 3300050493 nmdc:mga0k408_155740_c1 nmdc:mga0k408_155740_c1_225_1232 323
97 iso_pu_bacteria 2511231008 2511276260 323
98 iso_pu_bacteria 2818991450 2819620104 323
99 iso_pu_bacteria 8055266321 8055267773 323
100 3300003773 Ga0055537_1000184 Ga0055537_100018423 324
101 3300003784 Ga0055534_1000014 Ga0055534_100001423 324
102 3300003790 Ga0055528_1003341 Ga0055528_10033412 324
103 3300005445 Ga0070708_100071030 Ga0070708_1000710303 324
104 3300005467 Ga0070706_100062694 Ga0070706_1000626942 324
105 3300005467 Ga0070706_100180043 Ga0070706_1001800432 324
106 3300005468 Ga0070707_100007455 Ga0070707_1000074556 324
107 3300005471 Ga0070698_100009725 Ga0070698_1000097254 324
108 3300005536 Ga0070697_100008166 Ga0070697_1000081664 324
109 3300006028 Ga0070717_10001729 Ga0070717_1000172910 324
110 3300006048 Ga0075363_100023895 Ga0075363_1000238953 324
111 3300006195 Ga0075366_10075048 Ga0075366_100750482 324
112 3300006195 Ga0075366_10093585 Ga0075366_100935851 324
113 3300006353 Ga0075370_10014555 Ga0075370_100145554 324
114 3300006948 Ga0099826_10000173 Ga0099826_100001733 324
115 3300015261 Ga0182006_1011849 Ga0182006_10118492 324
116 3300025263 Ga0209565_1000047 Ga0209565_1000047196 324
117 3300025273 Ga0209673_1000079 Ga0209673_100007923 324
118 3300025273 Ga0209673_1008934 Ga0209673_10089345 324
119 3300025291 Ga0209675_1000046 Ga0209675_1000046196 324
120 3300025292 Ga0209676_1018318 Ga0209676_10183183 324
121 3300025298 Ga0209050_1000252 Ga0209050_1000252110 324
122 3300025303 Ga0209051_1000167 Ga0209051_100016737 324
123 3300025910 Ga0207684_10004134 Ga0207684_100041346 324
124 3300025922 Ga0207646_10016204 Ga0207646_100162044 324
125 3300027666 Ga0209282_1000285 Ga0209282_100028520 324
126 3300046460 Ga0495638_0023209 Ga0495638_0023209_312_1379 324
127 3300046471 Ga0495650_0000228 Ga0495650_0000228_103498_104556 324
128 3300046500 Ga0495596_0005447 Ga0495596_0005447_4139_5215 324
129 3300046506 Ga0495583_0004117 Ga0495583_0004117_3391_4434 324
130 3300046513 Ga0495616_0014096 Ga0495616_0014096_1500_2537 324
131 3300046520 Ga0495637_0000250 Ga0495637_0000250_35589_36656 324
132 3300046522 Ga0495643_0042786 Ga0495643_0042786_151_1209 324
133 3300046648 Ga0495611_0000188 Ga0495611_0000188_4512_5549 324
134 3300046660 Ga0495625_0003265 Ga0495625_0003265_11161_12228 324
135 3300046664 Ga0495659_0073544 Ga0495659_0073544_150_1163 324
136 3300046665 Ga0495661_0001412 Ga0495661_0001412_9496_10533 324
137 3300046794 Ga0495589_0000149 Ga0495589_0000149_4378_5415 324
138 3300046794 Ga0495589_0023731 Ga0495589_0023731_353_1429 324
139 3300047470 Ga0495681_0043087 Ga0495681_0043087_466_1533 324
140 3300048912 Ga0496109_0200735 Ga0496109_0200735_522_1544 324
141 3300048913 Ga0496110_0008637 Ga0496110_0008637_6900_7922 324
142 3300050490 nmdc:mga03n38_38560_c1 nmdc:mga03n38_38560_c1_375_1385 324
143 3300050493 nmdc:mga0k408_34005_c1 nmdc:mga0k408_34005_c1_1510_2550 324
144 3300050496 nmdc:mga07m45_1628_c1 nmdc:mga07m45_1628_c1_3135_4145 324
145 iso_pu_bacteria 2643221603 2644026448 324
146 3300035691 Ga0373931_0041652 Ga0373931_0041652_1108_2103 325
147 iso_pu_bacteria 2643221589 2643953531 325
148 iso_pu_bacteria 2643221602 2644021273 325
149 3300009093 Ga0105240_10000052 Ga0105240_1000005242 326
150 3300025913 Ga0207695_10000122 Ga0207695_10000122178 326
151 3300005843 Ga0068860_100000513 Ga0068860_10000051338 327
152 3300005844 Ga0068862_100143168 Ga0068862_1001431682 327
153 3300006051 Ga0075364_10131226 Ga0075364_101312262 327
154 3300009011 Ga0105251_10000043 Ga0105251_1000004342 327
155 3300010375 Ga0105239_10166130 Ga0105239_101661301 327
156 3300015262 Ga0182007_10000480 Ga0182007_100004802 327
157 3300025735 Ga0207713_1002089 Ga0207713_10020892 327
158 3300028380 Ga0268265_10180452 Ga0268265_101804521 327
159 3300028381 Ga0268264_10000119 Ga0268264_1000011911 327
160 3300044693 Ga0466961_0000423 Ga0466961_0000423_2589_3584 327
161 3300046558 Ga0495633_0012578 Ga0495633_0012578_1263_2291 327
162 3300048919 Ga0496116_0066312 Ga0496116_0066312_402_1397 327
163 3300048920 Ga0496117_0024775 Ga0496117_0024775_3198_4193 327
164 3300048921 Ga0496118_0001274 Ga0496118_0001274_18582_19577 327
165 3300048924 Ga0496121_0161175 Ga0496121_0161175_539_1591 327
166 3300050489 nmdc:mga03683_117267_c1 nmdc:mga03683_117267_c1_104_1132 327
167 3300050492 nmdc:mga0yw44_75833_c1 nmdc:mga0yw44_75833_c1_301_1353 327
168 3300002067 JGI24735J21928_10000349 JGI24735J21928_100003496 328
169 3300013105 Ga0157369_10037025 Ga0157369_100370255 328
170 3300046507 Ga0495606_0019306 Ga0495606_0019306_3393_4391 328
171 3300048920 Ga0496117_0048328 Ga0496117_0048328_1672_2670 328
172 3300048921 Ga0496118_0011746 Ga0496118_0011746_711_1709 328
173 2124908027 MRS2a_Contig_1752 MRS2a_00609910 329
174 2124908027 MRS2a_Contig_9023 MRS2a_00133090 329
175 2162886011 MRS1b_contig_1384097 MRS1b_0495.00003070 329
176 3300005288 Ga0065714_10001088 Ga0065714_1000108810 329
177 3300005289 Ga0065704_10073272 Ga0065704_100732722 329
178 3300005290 Ga0065712_10080479 Ga0065712_100804791 329
179 3300009011 Ga0105251_10000287 Ga0105251_1000028717 329
180 3300009011 Ga0105251_10003954 Ga0105251_100039545 329
181 3300009011 Ga0105251_10045785 Ga0105251_100457853 329
182 3300009036 Ga0105244_10006453 Ga0105244_100064538 329
183 3300009036 Ga0105244_10010649 Ga0105244_100106497 329
184 3300009036 Ga0105244_10011062 Ga0105244_100110624 329
185 3300009092 Ga0105250_10007225 Ga0105250_100072254 329
186 3300009092 Ga0105250_10028308 Ga0105250_100283082 329
187 3300009148 Ga0105243_10004617 Ga0105243_100046178 329
188 3300013102 Ga0157371_10000162 Ga0157371_1000016249 329
189 3300013104 Ga0157370_10002476 Ga0157370_100024763 329
190 3300014497 Ga0182008_10043344 Ga0182008_100433442 329
191 3300015261 Ga0182006_1000199 Ga0182006_100019945 329
192 3300015265 Ga0182005_1000086 Ga0182005_100008616 329
193 3300017792 Ga0163161_10031090 Ga0163161_100310902 329
194 3300025711 Ga0207696_1000018 Ga0207696_1000018243 329
195 3300025711 Ga0207696_1003557 Ga0207696_10035576 329
196 3300025735 Ga0207713_1000140 Ga0207713_100014041 329
197 3300025735 Ga0207713_1005202 Ga0207713_10052025 329
198 3300025735 Ga0207713_1049431 Ga0207713_10494312 329
199 3300041405 Ga0439438_000028 Ga0439438_000028_63766_64758 329
200 3300041407 Ga0439447_000012 Ga0439447_000012_63961_64953 329
201 3300041411 Ga0439466_0000019 Ga0439466_0000019_63940_64932 329
202 3300042146 Ga0450907_000611 Ga0450907_000611_3697_4689 329
203 3300042147 Ga0450910_000056 Ga0450910_000056_5115_6107 329
204 3300042184 Ga0450908_000004 Ga0450908_000004_8377_9369 329
205 3300046457 Ga0495590_0014673 Ga0495590_0014673_712_1749 329
206 3300046474 Ga0495605_0000195 Ga0495605_0000195_17293_18282 329
207 3300046474 Ga0495605_0001471 Ga0495605_0001471_7305_8342 329
208 3300046491 Ga0495584_0000464 Ga0495584_0000464_19895_20884 329
209 3300046507 Ga0495606_0003091 Ga0495606_0003091_6436_7425 329
210 3300046512 Ga0495610_0001858 Ga0495610_0001858_8825_9862 329
211 3300046512 Ga0495610_0013728 Ga0495610_0013728_2736_3725 329
212 3300046519 Ga0495632_0000031 Ga0495632_0000031_75946_76935 329
213 3300046519 Ga0495632_0006970 Ga0495632_0006970_5813_6802 329
214 3300046520 Ga0495637_0000178 Ga0495637_0000178_16813_17802 329
215 3300046520 Ga0495637_0002518 Ga0495637_0002518_4682_5671 329
216 3300046522 Ga0495643_0000143 Ga0495643_0000143_33133_34122 329
217 3300046523 Ga0495644_0077682 Ga0495644_0077682_88_1125 329
218 3300046530 Ga0495654_0002567 Ga0495654_0002567_7497_8486 329
219 3300046542 Ga0495597_0009921 Ga0495597_0009921_3173_4162 329
220 3300046542 Ga0495597_0030200 Ga0495597_0030200_78_1067 329
221 3300046692 Ga0495671_0000097 Ga0495671_0000097_30794_31783 329
222 3300046692 Ga0495671_0018364 Ga0495671_0018364_821_1810 329
223 3300046694 Ga0495649_0002400 Ga0495649_0002400_12042_13031 329
224 3300046810 Ga0495660_0094984 Ga0495660_0094984_49_1038 329
225 3300047323 Ga0495683_0000432 Ga0495683_0000432_7669_8658 329
226 3300047469 Ga0495673_0045062 Ga0495673_0045062_882_1871 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

114

352

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fog-assembly4.cif.gz_D x-ray structure of homo sapiens fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate at 1.94a resolution. 0.9181 91 328
6sbj-assembly1.cif.gz_A x-ray structure of mus musculus fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) apo-form uuncomplexed 0.9178 89 327
1saw-assembly1.cif.gz_A x-ray structure of homo sapiens protein flj36880 0.9173 89 329
6sbj-assembly1.cif.gz_B x-ray structure of mus musculus fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) apo-form uuncomplexed 0.9149 89 327
6foh-assembly1.cif.gz_A x-ray structure of homo sapiens fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) at 1.56a resolution. 0.9147 89 329
ID Description Score Start End Superfamily
6jvvA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9371 86 327 3.90.850.10
6jvvA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9323 86 327 3.90.850.10
af_Q9VDE2_1_220_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9204 89 327 3.90.850.10
3r6oA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9196 86 329 3.90.850.10
3r6oA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9153 86 329 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A445ZVX9-F1-model_v4 deleted 0.9903 1 325
AF-A0A652LTS4-F1-model_v4 deleted 0.9846 142 329
AF-A0A445ZVX9-F1-model_v4 deleted 0.9842 1 325
AF-A0A652LTS4-F1-model_v4 deleted 0.9693 142 329
AF-A0A5N8VK01-F1-model_v4 Fumarylacetoacetate hydrolase family protein 0.9631 3 328 GO:0016787
GO:0044281

Feature Viewer

pLDDT pTM Quality
93.94 0.93 High
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Predicted Structure (AlphaFold2)

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