F335400

General Info

Members Datasets Scaffolds Average Seq Length
223 127 446 453

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100020354|Ga0068863_1000203544
Length 519
Sequence MVERLIRAVDLLPAVELLLNIVAYMYFPGKEAIGFMMAGGQKEIELFEMDLLEQFRAFILKENLFSAKDTLLLAVSGGVDSAVLCELCQQAGYDFVIAHCNFQLRGEESNRDETFVKALGEKYNKPVLVKRFETDEYARQNKVSIQVAARELRYAWFFELVGSRESIVDSQFTEPGLTPDASRLTAKGSRLPTKILTAHHLDDNIETLLMNFFKGTGIAGLRGMLPNQGKIVRPLLFAKKETLQQFAIENKLSWMEDSSNQSDKYSRNYFRNQFIPILKNIYPAAENNLAHNLQRFRDIELLYQQAIDLHKKKLLEHKGNEIHIPVLKLKKARPQISVVYEIIRDFGFSADQAIEAIGLLNSETGKYIQSATHRIIKNRNWLIISPINSLGAATILIENGEKKVLFEAGILKLNSMTGDHNKIPNSGSGAEAFLDAREIVFPLLLRKWKTGDYFYPLGMQKKKKLARFFIDQKLSKTDKEKIWVLESNKKIIWIPGLRIDDRFKLTPGTRSILHLQLEN

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
121 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
122 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 2818991444 Filimonas endophytica 3197 Isolate Unclassified
127 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0
Isolates 0.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.69
Nodule 0
Rhizoplane 0
Rhizosphere 91.48
Stem 0
Stem Tuber 0
Unclassified 7.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100020354 3300005841 Bacteria 6344
2 JGI25406J46586_10000778 3300003203 Bacteria 15004
3 rootH2_10013032 3300003320 Bacteria 13909
4 rootH2_10021660 3300003320 Bacteria 8413
5 rootH1_10246676 3300003323 Bacteria 1662
6 rootH1_10307293 3300003323 Bacteria 2015
7 JGI25160J50197_1000692 3300003354 Bacteria 18642
8 Ga0070658_10139914 3300005327 Bacteria 2021
9 Ga0070676_10010559 3300005328 Bacteria 5010
10 Ga0070683_100103942 3300005329 Bacteria 2677
11 Ga0070670_100051289 3300005331 Bacteria 3544
12 Ga0070666_10000375 3300005335 Bacteria 28142
13 Ga0070680_100229682 3300005336 Unclassified 1567
14 Ga0068868_100018657 3300005338 Bacteria 5190
15 Ga0068868_100021732 3300005338 Bacteria 4834
16 Ga0068868_100185085 3300005338 Bacteria 1730
17 Ga0070669_100044566 3300005353 Bacteria 3232
18 Ga0070675_100186211 3300005354 Unclassified 1797
19 Ga0070671_100029209 3300005355 Unclassified 4546
20 Ga0070673_100023976 3300005364 Bacteria 4466
21 Ga0070659_100060366 3300005366 Bacteria 2995
22 Ga0070667_100012410 3300005367 Bacteria 7050
23 Ga0070667_100059021 3300005367 Bacteria 3245
24 Ga0070678_100033974 3300005456 Unclassified 3547
25 Ga0070678_100079695 3300005456 Bacteria 2478
26 Ga0070662_100068998 3300005457 Bacteria 2600
27 Ga0070681_10023367 3300005458 Bacteria 6217
28 Ga0068867_100080735 3300005459 Unclassified 2450
29 Ga0068867_100125845 3300005459 Bacteria 1986
30 Ga0070679_100006142 3300005530 Bacteria 11176
31 Ga0070679_100249575 3300005530 Bacteria 1731
32 Ga0068853_100001200 3300005539 Bacteria 18477
33 Ga0068853_100041329 3300005539 Bacteria 3938
34 Ga0068853_100168283 3300005539 Unclassified 1982
35 Ga0070672_100039789 3300005543 Bacteria 3604
36 Ga0070686_100124827 3300005544 Bacteria 1772
37 Ga0070665_100048134 3300005548 Bacteria 4281
38 Ga0068855_100000732 3300005563 Bacteria 40298
39 Ga0068855_100063928 3300005563 Bacteria 4293
40 Ga0068855_100138154 3300005563 Bacteria 2779
41 Ga0068857_100247327 3300005577 Bacteria 1634
42 Ga0068854_100049571 3300005578 Bacteria 3000
43 Ga0068854_100100979 3300005578 Bacteria 2163
44 Ga0068852_100001387 3300005616 Bacteria 16292
45 Ga0068852_100025056 3300005616 Bacteria 4829
46 Ga0068852_100029171 3300005616 Bacteria 4528
47 Ga0068859_100000086 3300005617 Bacteria 85696
48 Ga0068859_100004469 3300005617 Bacteria 14270
49 Ga0068859_100014202 3300005617 Bacteria 7986
50 Ga0068859_100015696 3300005617 Bacteria 7611
51 Ga0068864_100003035 3300005618 Bacteria 13871
52 Ga0068864_100206497 3300005618 Bacteria 1807
53 Ga0068851_10022169 3300005834 Bacteria 3091
54 Ga0068863_100023507 3300005841 Bacteria 5884
55 Ga0068863_100106354 3300005841 Bacteria 2670
56 Ga0068863_100166791 3300005841 Bacteria 2112
57 Ga0068858_100002273 3300005842 Bacteria 19437
58 Ga0068860_100002118 3300005843 Bacteria 20935
59 Ga0068860_100013458 3300005843 Bacteria 8021
60 Ga0068860_100093287 3300005843 Bacteria 2869
61 Ga0068860_100114121 3300005843 Bacteria 2583
62 Ga0068862_100012015 3300005844 Bacteria 7154
63 Ga0068862_100196334 3300005844 Bacteria 1818
64 Ga0068862_100308925 3300005844 Bacteria 1457
65 Ga0081539_10001487 3300005985 Bacteria 39673
66 Ga0097621_100002642 3300006237 Bacteria 12268
67 Ga0097621_100006337 3300006237 Bacteria 8397
68 Ga0068871_100011275 3300006358 Bacteria 6553
69 Ga0068871_100014621 3300006358 Bacteria 5855
70 Ga0068871_100071672 3300006358 Unclassified 2851
71 Ga0068871_100105199 3300006358 Bacteria 2368
72 Ga0097620_100000086 3300006931 Bacteria 85696
73 Ga0097620_100004469 3300006931 Bacteria 14270
74 Ga0097620_100014202 3300006931 Bacteria 7986
75 Ga0097620_100015696 3300006931 Bacteria 7611
76 Ga0105240_10019016 3300009093 Bacteria 9195
77 Ga0105240_10281556 3300009093 Unclassified 1910
78 Ga0105247_10004022 3300009101 Bacteria 9460
79 Ga0105241_10009259 3300009174 Bacteria 7242
80 Ga0105241_10044795 3300009174 Bacteria 3353
81 Ga0105242_10016107 3300009176 Bacteria 5809
82 Ga0105237_10000840 3300009545 Bacteria 41881
83 Ga0105237_10001891 3300009545 Bacteria 26726
84 Ga0105237_10281217 3300009545 Unclassified 1666
85 Ga0105249_10003436 3300009553 Bacteria 13717
86 Ga0105239_10000046 3300010375 Bacteria 181115
87 Ga0105239_10003894 3300010375 Bacteria 18092
88 Ga0105239_10028477 3300010375 Bacteria 6144
89 Ga0105239_10083788 3300010375 Bacteria 3512
90 Ga0105239_10113647 3300010375 Bacteria 3003
91 Ga0157373_10000692 3300013100 Bacteria 26430
92 Ga0157371_10000642 3300013102 Bacteria 41406
93 Ga0157371_10008340 3300013102 Bacteria 8268
94 Ga0157371_10032775 3300013102 Bacteria 3737
95 Ga0157370_10002064 3300013104 Bacteria 24613
96 Ga0157370_10004479 3300013104 Bacteria 16005
97 Ga0157370_10027614 3300013104 Bacteria 5596
98 Ga0157370_10046874 3300013104 Bacteria 4144
99 Ga0157370_10114718 3300013104 Unclassified 2517
100 Ga0157369_10063877 3300013105 Bacteria 3966
101 Ga0157369_10077685 3300013105 Bacteria 3558
102 Ga0157374_10000003 3300013296 Bacteria 854471
103 Ga0157374_10076417 3300013296 Bacteria 3167
104 Ga0157374_10083850 3300013296 Bacteria 3028
105 Ga0157378_10002828 3300013297 Bacteria 15480
106 Ga0157378_10007894 3300013297 Bacteria 9290
107 Ga0157378_10037582 3300013297 Bacteria 4289
108 Ga0157378_10098802 3300013297 Bacteria 2662
109 Ga0163162_10000386 3300013306 Bacteria 40256
110 Ga0163162_10003760 3300013306 Bacteria 14539
111 Ga0163162_10112877 3300013306 Bacteria 2816
112 Ga0163162_10272124 3300013306 Bacteria 1826
113 Ga0163162_10337971 3300013306 Bacteria 1638
114 Ga0157372_10001647 3300013307 Bacteria 24243
115 Ga0157372_10010152 3300013307 Bacteria 10000
116 Ga0157372_10013934 3300013307 Bacteria 8592
117 Ga0157372_10063979 3300013307 Bacteria 4126
118 Ga0157372_10070072 3300013307 Bacteria 3944
119 Ga0157375_10135727 3300013308 Bacteria 2584
120 Ga0157375_10400414 3300013308 Bacteria 1539
121 Ga0163163_10006644 3300014325 Bacteria 10130
122 Ga0163163_10275372 3300014325 Bacteria 1734
123 Ga0157377_10033109 3300014745 Bacteria 2819
124 Ga0157379_10058025 3300014968 Bacteria 3459
125 Ga0157376_10027158 3300014969 Bacteria 4534
126 Ga0157376_10059614 3300014969 Bacteria 3200
127 Ga0157376_10238106 3300014969 Bacteria 1694
128 Ga0163161_10054216 3300017792 Bacteria 2910
129 Ga0213876_10011097 3300021384 Bacteria 4820
130 Ga0207426_1000019 3300025302 Bacteria 558579
131 Ga0207710_10037805 3300025900 Bacteria 2133
132 Ga0207688_10018812 3300025901 Bacteria 3757
133 Ga0207680_10000117 3300025903 Bacteria 36819
134 Ga0207647_10119745 3300025904 Bacteria 1552
135 Ga0207645_10005943 3300025907 Bacteria 8794
136 Ga0207645_10036238 3300025907 Bacteria 3167
137 Ga0207643_10016645 3300025908 Unclassified 4011
138 Ga0207705_10005557 3300025909 Bacteria 9424
139 Ga0207705_10098695 3300025909 Bacteria 2146
140 Ga0207654_10016030 3300025911 Bacteria 3897
141 Ga0207695_10001174 3300025913 Bacteria 45172
142 Ga0207671_10001059 3300025914 Bacteria 33348
143 Ga0207671_10001845 3300025914 Bacteria 23653
144 Ga0207660_10021735 3300025917 Bacteria 4317
145 Ga0207652_10003369 3300025921 Bacteria 13194
146 Ga0207690_10084786 3300025932 Bacteria 2222
147 Ga0207706_10009575 3300025933 Bacteria 8894
148 Ga0207691_10017527 3300025940 Bacteria 6788
149 Ga0207691_10087333 3300025940 Unclassified 2798
150 Ga0207691_10180498 3300025940 Bacteria 1845
151 Ga0207689_10000260 3300025942 Bacteria 47416
152 Ga0207689_10011233 3300025942 Bacteria 7686
153 Ga0207689_10012068 3300025942 Bacteria 7402
154 Ga0207689_10028198 3300025942 Bacteria 4696
155 Ga0207667_10067884 3300025949 Bacteria 3714
156 Ga0207667_10078306 3300025949 Bacteria 3426
157 Ga0207712_10015256 3300025961 Bacteria 4953
158 Ga0207668_10037830 3300025972 Bacteria 3233
159 Ga0207658_10001959 3300025986 Bacteria 15364
160 Ga0207677_10014427 3300026023 Bacteria 4614
161 Ga0207677_10148346 3300026023 Unclassified 1805
162 Ga0207703_10041905 3300026035 Bacteria 3670
163 Ga0207703_10225477 3300026035 Bacteria 1677
164 Ga0207639_10004968 3300026041 Bacteria 8958
165 Ga0207639_10048905 3300026041 Bacteria 3203
166 Ga0207678_10144253 3300026067 Bacteria 2032
167 Ga0207702_10149151 3300026078 Bacteria 2125
168 Ga0207641_10004343 3300026088 Bacteria 12302
169 Ga0207648_10008178 3300026089 Bacteria 10169
170 Ga0207676_10087303 3300026095 Bacteria 2551
171 Ga0207676_10240895 3300026095 Unclassified 1623
172 Ga0207674_10070881 3300026116 Bacteria 3504
173 Ga0207674_10148138 3300026116 Bacteria 2305
174 Ga0207698_10022601 3300026142 Bacteria 4374
175 Ga0268265_10008089 3300028380 Bacteria 7106
176 Ga0268264_10001938 3300028381 Bacteria 18618
177 Ga0268264_10005346 3300028381 Bacteria 10883
178 Ga0268264_10031611 3300028381 Bacteria 4339
179 Ga0268264_10087297 3300028381 Bacteria 2682
180 Ga0268264_10171713 3300028381 Bacteria 1961
181 Ga0307515_10000780 3300028794 Bacteria 73338
182 Ga0307509_10004282 3300031507 Bacteria 20781
183 Ga0395899_0021374 3300037312 Unclassified 4907
184 Ga0395900_0079364 3300037418 Unclassified 3372
185 Ga0395898_0013985 3300037466 Bacteria 8246
186 Ga0395898_0219750 3300037466 Bacteria 1812
187 Ga0436365_0318004 3300039437 Bacteria 11661
188 Ga0436365_1300907 3300039437 Bacteria 16402
189 Ga0436365_1391527 3300039437 Bacteria 1774
190 Ga0436365_1416032 3300039437 Unclassified 2933
191 Ga0439457_006178 3300042014 Bacteria 2951
192 Ga0466972_0000014 3300044658 Bacteria 216776
193 Ga0466970_0013815 3300044765 Bacteria 4140
194 Ga0466959_0013380 3300045049 Bacteria 5949
195 Ga0466958_0099802 3300045836 Bacteria 1804
196 Ga0495606_0002128 3300046507 Bacteria 23952
197 Ga0495668_0000433 3300046616 Bacteria 54007
198 Ga0495668_0006962 3300046616 Bacteria 7314
199 Ga0495611_0000508 3300046648 Bacteria 23086
200 Ga0501034_0011384 3300049571 Bacteria 9226
201 Ga0501034_0032713 3300049571 Bacteria 5282
202 Ga0501034_0101788 3300049571 Bacteria 2866
203 Ga0501034_0136027 3300049571 Bacteria 2438
204 Ga0501034_0303556 3300049571 Bacteria 1533
205 Ga0501039_0089787 3300049575 Bacteria 2395
206 Ga0501043_0003826 3300049579 Bacteria 12380
207 Ga0501043_0015546 3300049579 Bacteria 5964
208 Ga0501047_0054355 3300049581 Bacteria 3873
209 Ga0501047_0116453 3300049581 Bacteria 2554
210 Ga0501067_0079334 3300049583 Bacteria 1819
211 Ga0501073_0028982 3300049589 Bacteria 3955
212 Ga0501074_0000591 3300049590 Bacteria 22526
213 Ga0501080_0217011 3300049742 Bacteria 1751
214 Ga0501044_0011474 3300049823 Bacteria 9601
215 Ga0501284_00033 3300050005 Bacteria 63455
216 Ga0500562_000008 3300053108 Bacteria 188332
217 Ga0500622_0002310 3300053156 Bacteria 13942
218 Ga0500622_0125527 3300053156 Bacteria 1240
219 Ga0501084_0000686 3300054114 Bacteria 25875
220 Ga0500661_008000 3300055283 Bacteria 1948
221 Ga0501082_0078026 3300060353 Bacteria 2856
222 2819586767 2818991444 Bacteria 6968812
223 2929155441 2929154850 Bacteria 6753285
224 Ga0068863_100020354
225 JGI25406J46586_10000778
226 rootH2_10013032
227 rootH2_10021660
228 rootH1_10246676
229 rootH1_10307293
230 JGI25160J50197_1000692
231 Ga0070658_10139914
232 Ga0070676_10010559
233 Ga0070683_100103942
234 Ga0070670_100051289
235 Ga0070666_10000375
236 Ga0070680_100229682
237 Ga0068868_100018657
238 Ga0068868_100021732
239 Ga0068868_100185085
240 Ga0070669_100044566
241 Ga0070675_100186211
242 Ga0070671_100029209
243 Ga0070673_100023976
244 Ga0070659_100060366
245 Ga0070667_100012410
246 Ga0070667_100059021
247 Ga0070678_100033974
248 Ga0070678_100079695
249 Ga0070662_100068998
250 Ga0070681_10023367
251 Ga0068867_100080735
252 Ga0068867_100125845
253 Ga0070679_100006142
254 Ga0070679_100249575
255 Ga0068853_100001200
256 Ga0068853_100041329
257 Ga0068853_100168283
258 Ga0070672_100039789
259 Ga0070686_100124827
260 Ga0070665_100048134
261 Ga0068855_100000732
262 Ga0068855_100063928
263 Ga0068855_100138154
264 Ga0068857_100247327
265 Ga0068854_100049571
266 Ga0068854_100100979
267 Ga0068852_100001387
268 Ga0068852_100025056
269 Ga0068852_100029171
270 Ga0068859_100000086
271 Ga0068859_100004469
272 Ga0068859_100014202
273 Ga0068859_100015696
274 Ga0068864_100003035
275 Ga0068864_100206497
276 Ga0068851_10022169
277 Ga0068863_100023507
278 Ga0068863_100106354
279 Ga0068863_100166791
280 Ga0068858_100002273
281 Ga0068860_100002118
282 Ga0068860_100013458
283 Ga0068860_100093287
284 Ga0068860_100114121
285 Ga0068862_100012015
286 Ga0068862_100196334
287 Ga0068862_100308925
288 Ga0081539_10001487
289 Ga0097621_100002642
290 Ga0097621_100006337
291 Ga0068871_100011275
292 Ga0068871_100014621
293 Ga0068871_100071672
294 Ga0068871_100105199
295 Ga0097620_100000086
296 Ga0097620_100004469
297 Ga0097620_100014202
298 Ga0097620_100015696
299 Ga0105240_10019016
300 Ga0105240_10281556
301 Ga0105247_10004022
302 Ga0105241_10009259
303 Ga0105241_10044795
304 Ga0105242_10016107
305 Ga0105237_10000840
306 Ga0105237_10001891
307 Ga0105237_10281217
308 Ga0105249_10003436
309 Ga0105239_10000046
310 Ga0105239_10003894
311 Ga0105239_10028477
312 Ga0105239_10083788
313 Ga0105239_10113647
314 Ga0157373_10000692
315 Ga0157371_10000642
316 Ga0157371_10008340
317 Ga0157371_10032775
318 Ga0157370_10002064
319 Ga0157370_10004479
320 Ga0157370_10027614
321 Ga0157370_10046874
322 Ga0157370_10114718
323 Ga0157369_10063877
324 Ga0157369_10077685
325 Ga0157374_10000003
326 Ga0157374_10076417
327 Ga0157374_10083850
328 Ga0157378_10002828
329 Ga0157378_10007894
330 Ga0157378_10037582
331 Ga0157378_10098802
332 Ga0163162_10000386
333 Ga0163162_10003760
334 Ga0163162_10112877
335 Ga0163162_10272124
336 Ga0163162_10337971
337 Ga0157372_10001647
338 Ga0157372_10010152
339 Ga0157372_10013934
340 Ga0157372_10063979
341 Ga0157372_10070072
342 Ga0157375_10135727
343 Ga0157375_10400414
344 Ga0163163_10006644
345 Ga0163163_10275372
346 Ga0157377_10033109
347 Ga0157379_10058025
348 Ga0157376_10027158
349 Ga0157376_10059614
350 Ga0157376_10238106
351 Ga0163161_10054216
352 Ga0213876_10011097
353 Ga0207426_1000019
354 Ga0207710_10037805
355 Ga0207688_10018812
356 Ga0207680_10000117
357 Ga0207647_10119745
358 Ga0207645_10005943
359 Ga0207645_10036238
360 Ga0207643_10016645
361 Ga0207705_10005557
362 Ga0207705_10098695
363 Ga0207654_10016030
364 Ga0207695_10001174
365 Ga0207671_10001059
366 Ga0207671_10001845
367 Ga0207660_10021735
368 Ga0207652_10003369
369 Ga0207690_10084786
370 Ga0207706_10009575
371 Ga0207691_10017527
372 Ga0207691_10087333
373 Ga0207691_10180498
374 Ga0207689_10000260
375 Ga0207689_10011233
376 Ga0207689_10012068
377 Ga0207689_10028198
378 Ga0207667_10067884
379 Ga0207667_10078306
380 Ga0207712_10015256
381 Ga0207668_10037830
382 Ga0207658_10001959
383 Ga0207677_10014427
384 Ga0207677_10148346
385 Ga0207703_10041905
386 Ga0207703_10225477
387 Ga0207639_10004968
388 Ga0207639_10048905
389 Ga0207678_10144253
390 Ga0207702_10149151
391 Ga0207641_10004343
392 Ga0207648_10008178
393 Ga0207676_10087303
394 Ga0207676_10240895
395 Ga0207674_10070881
396 Ga0207674_10148138
397 Ga0207698_10022601
398 Ga0268265_10008089
399 Ga0268264_10001938
400 Ga0268264_10005346
401 Ga0268264_10031611
402 Ga0268264_10087297
403 Ga0268264_10171713
404 Ga0307515_10000780
405 Ga0307509_10004282
406 Ga0395899_0021374
407 Ga0395900_0079364
408 Ga0395898_0013985
409 Ga0395898_0219750
410 Ga0436365_0318004
411 Ga0436365_1300907
412 Ga0436365_1391527
413 Ga0436365_1416032
414 Ga0439457_006178
415 Ga0466972_0000014
416 Ga0466970_0013815
417 Ga0466959_0013380
418 Ga0466958_0099802
419 Ga0495606_0002128
420 Ga0495668_0000433
421 Ga0495668_0006962
422 Ga0495611_0000508
423 Ga0501034_0011384
424 Ga0501034_0032713
425 Ga0501034_0101788
426 Ga0501034_0136027
427 Ga0501034_0303556
428 Ga0501039_0089787
429 Ga0501043_0003826
430 Ga0501043_0015546
431 Ga0501047_0054355
432 Ga0501047_0116453
433 Ga0501067_0079334
434 Ga0501073_0028982
435 Ga0501074_0000591
436 Ga0501080_0217011
437 Ga0501044_0011474
438 Ga0501284_00033
439 Ga0500562_000008
440 Ga0500622_0002310
441 Ga0500622_0125527
442 Ga0501084_0000686
443 Ga0500661_008000
444 Ga0501082_0078026
445 2819586767
446 2929155441

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01171

ATP_bind_3

PP-loop family

186

273

0.97

PF11734

TilS_C

TilS substrate C-terminal domain

443

517

0.93

PF01171

ATP_bind_3

PP-loop family

70

168

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wy5-assembly1.cif.gz_A crystal structure of isoluecyl-trna lysidine synthetase 0.8689 1 324
1wy5-assembly1.cif.gz_A crystal structure of isoluecyl-trna lysidine synthetase 0.8611 1 324
7db7-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis phenylalanyl-trna synthetase in complex with compound gdi05-001 0.8377 371 456
3hj7-assembly1.cif.gz_A crystal structure of tils c-terminal domain 0.8334 335 462
6p24-assembly1.cif.gz_B escherichia coli trna synthetase 0.8314 371 457
ID Description Score Start End Superfamily
af_P9WG53_6_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8839 4 222 3.40.50.620
1wy5B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.881 1 223 3.40.50.620
1wy5B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8694 1 223 3.40.50.620
af_P9WG53_6_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8586 4 222 3.40.50.620
3a2kB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8528 3 138 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7C1RQ35-F1-model_v4 tRNA(Ile)-lysidine synthetase 0.9821 374 449 GO:0005524
GO:0005737
GO:0008033
GO:0016879
AF-A0A7Y3E0Q1-F1-model_v4 tRNA lysidine(34) synthetase TilS (EC 6.3.4.19) 0.9748 366 458 GO:0005524
GO:0005737
GO:0008033
GO:0032267
AF-A0A3C0R942-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9725 3 114 GO:0005524
GO:0006400
GO:0032267
AF-A0A258KZR4-F1-model_v4 Lysidine-tRNA(Ile) synthetase C-terminal domain-containing protein 0.9686 345 458 GO:0005524
GO:0005737
GO:0008033
GO:0016879
AF-A0A7C3GC02-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9653 3 236 GO:0005524
GO:0005737
GO:0006400
GO:0032267

Map