F334641

General Info

Members Datasets Scaffolds Average Seq Length
222 151 444 255

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100587639|Ga0307416_1005876391
Length 307
Sequence VRVLCCHTFSLPLSLPNRPAIIGPLSDLVHFNVKRGHRYLISVPRDRNLYHKEVMTADSPAIAVRELRKVYGTKPAVDGLNLTVPRGCFFGFLGPNGAGKTTTIRMMMGLVPPTSGSIEILGLTMPADDVAIKSRIGLVPDESLLFDHLTGAEFVEFVGRMYNLPAATARERARELIDLFELGGNSRKLIGEYSKGMRKRVAMAASLIHRPQLFLMDEPFEGVDAVGARLMKDILLDQVRQGATIFLTSHVLEVVERLCDRVAIIHDGKIVTEGTISELRTGSETLEDMFVRVVGGVRAGEPLEWLS

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 0
Rhizosphere 96.4
Stem 0
Stem Tuber 0
Unclassified 4.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100587639 3300032002 Bacteria 1192
2 Ga0070658_10007223 3300005327 Bacteria 8964
3 Ga0070683_100068703 3300005329 Bacteria 3302
4 Ga0070683_100235564 3300005329 Bacteria 1741
5 Ga0070683_100510843 3300005329 Bacteria 1148
6 Ga0070660_100282239 3300005339 Bacteria 1359
7 Ga0070671_100449417 3300005355 Bacteria 1106
8 Ga0070671_100557785 3300005355 Bacteria 988
9 Ga0070673_100013643 3300005364 Bacteria 5630
10 Ga0070673_100086910 3300005364 Bacteria 2548
11 Ga0070688_100021028 3300005365 Bacteria 3805
12 Ga0070659_100376434 3300005366 Bacteria 1195
13 Ga0070667_100339544 3300005367 Bacteria 1358
14 Ga0070709_10058600 3300005434 Unclassified 2443
15 Ga0070714_100000386 3300005435 Bacteria 32917
16 Ga0070714_100049358 3300005435 Bacteria 3582
17 Ga0070713_100003958 3300005436 Bacteria 9846
18 Ga0070713_100211987 3300005436 Bacteria 1754
19 Ga0070711_100006653 3300005439 Bacteria 6987
20 Ga0070711_100251308 3300005439 Bacteria 1387
21 Ga0070708_100035590 3300005445 Bacteria 4338
22 Ga0070678_100065892 3300005456 Bacteria 2691
23 Ga0070681_10004902 3300005458 Bacteria 12847
24 Ga0070681_10024827 3300005458 Bacteria 6030
25 Ga0070681_10048973 3300005458 Unclassified 4221
26 Ga0070681_10100132 3300005458 Bacteria 2844
27 Ga0070681_10359697 3300005458 Bacteria 1366
28 Ga0070679_100032818 3300005530 Bacteria 5139
29 Ga0070679_100096179 3300005530 Bacteria 2949
30 Ga0070684_100135388 3300005535 Unclassified 2225
31 Ga0070697_100087533 3300005536 Bacteria 2572
32 Ga0070695_100034915 3300005545 Bacteria 3157
33 Ga0070695_100299991 3300005545 Bacteria 1187
34 Ga0070696_100006796 3300005546 Bacteria 7640
35 Ga0070693_100141674 3300005547 Bacteria 1514
36 Ga0070665_100054047 3300005548 Bacteria 4028
37 Ga0068855_100012657 3300005563 Bacteria 10181
38 Ga0068855_100036763 3300005563 Bacteria 5826
39 Ga0068855_100153525 3300005563 Bacteria 2617
40 Ga0068856_100144757 3300005614 Bacteria 2384
41 Ga0068859_100650484 3300005617 Unclassified 1146
42 Ga0068870_10418517 3300005840 Bacteria 876
43 Ga0068863_100023039 3300005841 Bacteria 5952
44 Ga0068863_100316225 3300005841 Bacteria 1516
45 Ga0068858_100526869 3300005842 Bacteria 1143
46 Ga0070717_10007519 3300006028 Bacteria 8098
47 Ga0070717_10103811 3300006028 Bacteria 2417
48 Ga0075431_100052682 3300006847 Bacteria 4196
49 Ga0075433_10522522 3300006852 Bacteria 1044
50 Ga0075436_100001863 3300006914 Bacteria 14472
51 Ga0097620_100650599 3300006931 Unclassified 1146
52 Ga0105240_10000395 3300009093 Bacteria 81541
53 Ga0105240_10011189 3300009093 Bacteria 12522
54 Ga0105240_10152312 3300009093 Bacteria 2753
55 Ga0105240_10204064 3300009093 Bacteria 2315
56 Ga0105240_10371076 3300009093 Bacteria 1618
57 Ga0105245_10687478 3300009098 Bacteria 1055
58 Ga0105242_10157001 3300009176 Bacteria 1988
59 Ga0105242_10765364 3300009176 Bacteria 952
60 Ga0105248_10033740 3300009177 Bacteria 5720
61 Ga0105248_10115060 3300009177 Bacteria 3034
62 Ga0105237_10016442 3300009545 Bacteria 7686
63 Ga0105237_10133187 3300009545 Bacteria 2480
64 Ga0105238_10263131 3300009551 Bacteria 1705
65 Ga0105249_10339848 3300009553 Bacteria 1518
66 Ga0157370_10002059 3300013104 Bacteria 24637
67 Ga0157370_10081712 3300013104 Unclassified 3040
68 Ga0157370_10196866 3300013104 Bacteria 1870
69 Ga0157369_10008240 3300013105 Bacteria 11947
70 Ga0157369_10009518 3300013105 Bacteria 11110
71 Ga0157369_10153911 3300013105 Bacteria 2430
72 Ga0157369_10170860 3300013105 Bacteria 2291
73 Ga0157372_10015021 3300013307 Bacteria 8287
74 Ga0157372_10304678 3300013307 Bacteria 1853
75 Ga0157375_11146608 3300013308 Bacteria 911
76 Ga0163163_10087123 3300014325 Bacteria 3133
77 Ga0163163_10137154 3300014325 Bacteria 2488
78 Ga0157380_11777696 3300014326 Unclassified 675
79 Ga0213875_10009421 3300021388 Bacteria 4946
80 Ga0213875_10226013 3300021388 Bacteria 881
81 Ga0207647_10059447 3300025904 Bacteria 2339
82 Ga0207699_10029614 3300025906 Bacteria 3054
83 Ga0207705_10176446 3300025909 Bacteria 1611
84 Ga0207707_10015096 3300025912 Bacteria 6724
85 Ga0207707_10035849 3300025912 Unclassified 4338
86 Ga0207707_10113670 3300025912 Bacteria 2366
87 Ga0207695_10002408 3300025913 Bacteria 27693
88 Ga0207695_10016759 3300025913 Bacteria 8555
89 Ga0207695_10239623 3300025913 Bacteria 1716
90 Ga0207671_10035586 3300025914 Bacteria 3694
91 Ga0207671_10108419 3300025914 Bacteria 2110
92 Ga0207663_10029868 3300025916 Bacteria 3208
93 Ga0207660_10000785 3300025917 Bacteria 21106
94 Ga0207657_10262187 3300025919 Bacteria 1375
95 Ga0207652_10091469 3300025921 Bacteria 2675
96 Ga0207652_10143573 3300025921 Unclassified 2135
97 Ga0207694_10251790 3300025924 Bacteria 1445
98 Ga0207700_10238651 3300025928 Bacteria 1548
99 Ga0207664_10000741 3300025929 Bacteria 22186
100 Ga0207664_10077979 3300025929 Bacteria 2686
101 Ga0207686_10288113 3300025934 Bacteria 1215
102 Ga0207686_10377984 3300025934 Bacteria 1073
103 Ga0207670_10483793 3300025936 Bacteria 1003
104 Ga0207711_10068156 3300025941 Bacteria 3081
105 Ga0207667_10033401 3300025949 Bacteria 5531
106 Ga0207667_10132297 3300025949 Bacteria 2569
107 Ga0207651_10031579 3300025960 Bacteria 3388
108 Ga0207651_10068646 3300025960 Bacteria 2500
109 Ga0207658_10240732 3300025986 Bacteria 1533
110 Ga0207703_10312298 3300026035 Bacteria 1437
111 Ga0207703_10500357 3300026035 Bacteria 1141
112 Ga0207678_10064880 3300026067 Bacteria 3137
113 Ga0207702_10050542 3300026078 Bacteria 3510
114 Ga0207641_10020083 3300026088 Bacteria 5485
115 Ga0207683_10298876 3300026121 Bacteria 1473
116 Ga0268266_10035199 3300028379 Bacteria 4260
117 Ga0265338_10104097 3300028800 Bacteria 2304
118 Ga0265325_10008705 3300031241 Bacteria 5968
119 Ga0265331_10036183 3300031250 Bacteria 2426
120 Ga0265331_10048011 3300031250 Bacteria 2054
121 Ga0265316_10141719 3300031344 Bacteria 1805
122 Ga0265313_10155983 3300031595 Bacteria 972
123 Ga0265314_10024817 3300031711 Bacteria 4535
124 Ga0265314_10139024 3300031711 Bacteria 1504
125 Ga0373954_0215874 3300035118 Bacteria 943
126 Ga0373955_0028756 3300035172 Bacteria 2885
127 Ga0373955_0249305 3300035172 Bacteria 1064
128 Ga0373927_0000721 3300035695 Bacteria 25317
129 Ga0373927_0012881 3300035695 Bacteria 5561
130 Ga0373927_0046005 3300035695 Bacteria 2824
131 Ga0373933_0054490 3300035724 Bacteria 2397
132 Ga0373947_0050814 3300035725 Bacteria 2493
133 Ga0373947_0123269 3300035725 Bacteria 1648
134 Ga0373947_0339197 3300035725 Bacteria 1007
135 Ga0373937_0002395 3300036401 Bacteria 15605
136 Ga0373937_0105995 3300036401 Bacteria 2613
137 Ga0373937_0399251 3300036401 Bacteria 1304
138 Ga0373925_0059328 3300037068 Bacteria 2870
139 Ga0373925_0096465 3300037068 Bacteria 2267
140 Ga0395900_0134104 3300037418 Bacteria 2537
141 Ga0395898_0055496 3300037466 Bacteria 3864
142 Ga0436364_0278144 3300037853 Bacteria 3033
143 Ga0436364_0511921 3300037853 Bacteria 11886
144 Ga0436364_0529851 3300037853 Bacteria 3567
145 Ga0436364_1356690 3300037853 Bacteria 1287
146 Ga0436365_0737054 3300039437 Bacteria 5656
147 Ga0466963_0282355 3300044694 Bacteria 1167
148 Ga0451576_0015310 3300045051 Bacteria 8500
149 Ga0451576_0383663 3300045051 Bacteria 1473
150 Ga0451576_0576883 3300045051 Bacteria 1182
151 Ga0451576_0625824 3300045051 Unclassified 1131
152 Ga0495592_0040026 3300046454 Bacteria 3518
153 Ga0495651_0075769 3300046462 Bacteria 2549
154 Ga0495653_0359827 3300046463 Bacteria 934
155 Ga0495653_0404886 3300046463 Bacteria 866
156 Ga0495580_0006587 3300046472 Bacteria 9438
157 Ga0495580_0017840 3300046472 Bacteria 5295
158 Ga0495580_0054412 3300046472 Bacteria 2823
159 Ga0495582_0069390 3300046473 Bacteria 1949
160 Ga0495662_0007125 3300046476 Bacteria 5546
161 Ga0495664_0003971 3300046477 Bacteria 8076
162 Ga0495608_0019772 3300046511 Bacteria 4631
163 Ga0495628_0014696 3300046516 Bacteria 6556
164 Ga0495652_0107276 3300046529 Bacteria 2253
165 Ga0495640_0120135 3300046533 Bacteria 1709
166 Ga0495586_0202323 3300046535 Bacteria 1126
167 Ga0495587_0059492 3300046536 Bacteria 2242
168 Ga0495645_0017033 3300046543 Bacteria 5202
169 Ga0495667_0016925 3300046559 Bacteria 4924
170 Ga0495667_0030407 3300046559 Bacteria 3629
171 Ga0495667_0444708 3300046559 Bacteria 815
172 Ga0495634_0069716 3300046642 Bacteria 2319
173 Ga0495635_0025104 3300046663 Bacteria 4152
174 Ga0495635_0107913 3300046663 Bacteria 1902
175 Ga0495599_0004606 3300046678 Bacteria 8179
176 Ga0495623_0106158 3300046679 Bacteria 1706
177 Ga0495646_0062384 3300046680 Bacteria 2216
178 Ga0495604_0112492 3300047317 Bacteria 1983
179 Ga0495604_0181699 3300047317 Bacteria 1471
180 Ga0495674_0012771 3300047319 Bacteria 7907
181 Ga0495674_0371089 3300047319 Bacteria 1159
182 Ga0495680_0020681 3300047322 Bacteria 5528
183 Ga0495675_0185112 3300047444 Bacteria 1273
184 Ga0495684_0046272 3300047471 Bacteria 3328
185 Ga0495684_0182218 3300047471 Bacteria 1556
186 Ga0495684_0207044 3300047471 Bacteria 1444
187 Ga0495684_0220254 3300047471 Bacteria 1392
188 Ga0495602_0100925 3300048088 Bacteria 2368
189 Ga0501031_0014786 3300049568 Bacteria 5073
190 Ga0501032_0002962 3300049569 Bacteria 13186
191 Ga0501033_0095904 3300049570 Bacteria 2167
192 Ga0501034_0018812 3300049571 Bacteria 7079
193 Ga0501036_0000710 3300049572 Bacteria 24633
194 Ga0501037_0010068 3300049573 Bacteria 6935
195 Ga0501038_0018094 3300049574 Bacteria 6365
196 Ga0501039_0017655 3300049575 Bacteria 5474
197 Ga0501043_0002384 3300049579 Bacteria 15921
198 Ga0501046_0001132 3300049580 Bacteria 26031
199 Ga0501047_0141947 3300049581 Bacteria 2280
200 Ga0501047_0347346 3300049581 Bacteria 1320
201 Ga0501048_0044300 3300049582 Bacteria 3182
202 Ga0501068_0001493 3300049584 Bacteria 12456
203 Ga0501070_0055319 3300049586 Bacteria 3288
204 Ga0501071_0135811 3300049587 Bacteria 1830
205 Ga0501072_0000502 3300049588 Bacteria 28155
206 Ga0501073_0007546 3300049589 Bacteria 8077
207 Ga0501074_0042782 3300049590 Bacteria 3276
208 Ga0501077_0028751 3300049593 Bacteria 3533
209 Ga0501247_003816 3300049677 Bacteria 1630
210 Ga0501079_0022415 3300049741 Bacteria 4842
211 Ga0501080_0017067 3300049742 Bacteria 6704
212 Ga0501083_0004163 3300049744 Bacteria 10186
213 Ga0501035_0041258 3300049822 Bacteria 4167
214 Ga0501044_0037342 3300049823 Bacteria 5077
215 Ga0501045_0075264 3300049824 Bacteria 2487
216 nmdc:mga0qj67_13889_c1 3300050509 Bacteria 6080
217 nmdc:mga06r32_12470_c1 3300050510 Bacteria 7671
218 nmdc:mga08x19_3427_c1 3300050514 Bacteria 9453
219 nmdc:mga0a205_511950_c1 3300050515 Bacteria 1057
220 Ga0500568_0005650 3300053139 Bacteria 6427
221 Ga0501084_0002551 3300054114 Bacteria 14680
222 Ga0501082_0019842 3300060353 Bacteria 5796
223 Ga0307416_100587639
224 Ga0070658_10007223
225 Ga0070683_100068703
226 Ga0070683_100235564
227 Ga0070683_100510843
228 Ga0070660_100282239
229 Ga0070671_100449417
230 Ga0070671_100557785
231 Ga0070673_100013643
232 Ga0070673_100086910
233 Ga0070688_100021028
234 Ga0070659_100376434
235 Ga0070667_100339544
236 Ga0070709_10058600
237 Ga0070714_100000386
238 Ga0070714_100049358
239 Ga0070713_100003958
240 Ga0070713_100211987
241 Ga0070711_100006653
242 Ga0070711_100251308
243 Ga0070708_100035590
244 Ga0070678_100065892
245 Ga0070681_10004902
246 Ga0070681_10024827
247 Ga0070681_10048973
248 Ga0070681_10100132
249 Ga0070681_10359697
250 Ga0070679_100032818
251 Ga0070679_100096179
252 Ga0070684_100135388
253 Ga0070697_100087533
254 Ga0070695_100034915
255 Ga0070695_100299991
256 Ga0070696_100006796
257 Ga0070693_100141674
258 Ga0070665_100054047
259 Ga0068855_100012657
260 Ga0068855_100036763
261 Ga0068855_100153525
262 Ga0068856_100144757
263 Ga0068859_100650484
264 Ga0068870_10418517
265 Ga0068863_100023039
266 Ga0068863_100316225
267 Ga0068858_100526869
268 Ga0070717_10007519
269 Ga0070717_10103811
270 Ga0075431_100052682
271 Ga0075433_10522522
272 Ga0075436_100001863
273 Ga0097620_100650599
274 Ga0105240_10000395
275 Ga0105240_10011189
276 Ga0105240_10152312
277 Ga0105240_10204064
278 Ga0105240_10371076
279 Ga0105245_10687478
280 Ga0105242_10157001
281 Ga0105242_10765364
282 Ga0105248_10033740
283 Ga0105248_10115060
284 Ga0105237_10016442
285 Ga0105237_10133187
286 Ga0105238_10263131
287 Ga0105249_10339848
288 Ga0157370_10002059
289 Ga0157370_10081712
290 Ga0157370_10196866
291 Ga0157369_10008240
292 Ga0157369_10009518
293 Ga0157369_10153911
294 Ga0157369_10170860
295 Ga0157372_10015021
296 Ga0157372_10304678
297 Ga0157375_11146608
298 Ga0163163_10087123
299 Ga0163163_10137154
300 Ga0157380_11777696
301 Ga0213875_10009421
302 Ga0213875_10226013
303 Ga0207647_10059447
304 Ga0207699_10029614
305 Ga0207705_10176446
306 Ga0207707_10015096
307 Ga0207707_10035849
308 Ga0207707_10113670
309 Ga0207695_10002408
310 Ga0207695_10016759
311 Ga0207695_10239623
312 Ga0207671_10035586
313 Ga0207671_10108419
314 Ga0207663_10029868
315 Ga0207660_10000785
316 Ga0207657_10262187
317 Ga0207652_10091469
318 Ga0207652_10143573
319 Ga0207694_10251790
320 Ga0207700_10238651
321 Ga0207664_10000741
322 Ga0207664_10077979
323 Ga0207686_10288113
324 Ga0207686_10377984
325 Ga0207670_10483793
326 Ga0207711_10068156
327 Ga0207667_10033401
328 Ga0207667_10132297
329 Ga0207651_10031579
330 Ga0207651_10068646
331 Ga0207658_10240732
332 Ga0207703_10312298
333 Ga0207703_10500357
334 Ga0207678_10064880
335 Ga0207702_10050542
336 Ga0207641_10020083
337 Ga0207683_10298876
338 Ga0268266_10035199
339 Ga0265338_10104097
340 Ga0265325_10008705
341 Ga0265331_10036183
342 Ga0265331_10048011
343 Ga0265316_10141719
344 Ga0265313_10155983
345 Ga0265314_10024817
346 Ga0265314_10139024
347 Ga0373954_0215874
348 Ga0373955_0028756
349 Ga0373955_0249305
350 Ga0373927_0000721
351 Ga0373927_0012881
352 Ga0373927_0046005
353 Ga0373933_0054490
354 Ga0373947_0050814
355 Ga0373947_0123269
356 Ga0373947_0339197
357 Ga0373937_0002395
358 Ga0373937_0105995
359 Ga0373937_0399251
360 Ga0373925_0059328
361 Ga0373925_0096465
362 Ga0395900_0134104
363 Ga0395898_0055496
364 Ga0436364_0278144
365 Ga0436364_0511921
366 Ga0436364_0529851
367 Ga0436364_1356690
368 Ga0436365_0737054
369 Ga0466963_0282355
370 Ga0451576_0015310
371 Ga0451576_0383663
372 Ga0451576_0576883
373 Ga0451576_0625824
374 Ga0495592_0040026
375 Ga0495651_0075769
376 Ga0495653_0359827
377 Ga0495653_0404886
378 Ga0495580_0006587
379 Ga0495580_0017840
380 Ga0495580_0054412
381 Ga0495582_0069390
382 Ga0495662_0007125
383 Ga0495664_0003971
384 Ga0495608_0019772
385 Ga0495628_0014696
386 Ga0495652_0107276
387 Ga0495640_0120135
388 Ga0495586_0202323
389 Ga0495587_0059492
390 Ga0495645_0017033
391 Ga0495667_0016925
392 Ga0495667_0030407
393 Ga0495667_0444708
394 Ga0495634_0069716
395 Ga0495635_0025104
396 Ga0495635_0107913
397 Ga0495599_0004606
398 Ga0495623_0106158
399 Ga0495646_0062384
400 Ga0495604_0112492
401 Ga0495604_0181699
402 Ga0495674_0012771
403 Ga0495674_0371089
404 Ga0495680_0020681
405 Ga0495675_0185112
406 Ga0495684_0046272
407 Ga0495684_0182218
408 Ga0495684_0207044
409 Ga0495684_0220254
410 Ga0495602_0100925
411 Ga0501031_0014786
412 Ga0501032_0002962
413 Ga0501033_0095904
414 Ga0501034_0018812
415 Ga0501036_0000710
416 Ga0501037_0010068
417 Ga0501038_0018094
418 Ga0501039_0017655
419 Ga0501043_0002384
420 Ga0501046_0001132
421 Ga0501047_0141947
422 Ga0501047_0347346
423 Ga0501048_0044300
424 Ga0501068_0001493
425 Ga0501070_0055319
426 Ga0501071_0135811
427 Ga0501072_0000502
428 Ga0501073_0007546
429 Ga0501074_0042782
430 Ga0501077_0028751
431 Ga0501247_003816
432 Ga0501079_0022415
433 Ga0501080_0017067
434 Ga0501083_0004163
435 Ga0501035_0041258
436 Ga0501044_0037342
437 Ga0501045_0075264
438 nmdc:mga0qj67_13889_c1
439 nmdc:mga06r32_12470_c1
440 nmdc:mga08x19_3427_c1
441 nmdc:mga0a205_511950_c1
442 Ga0500568_0005650
443 Ga0501084_0002551
444 Ga0501082_0019842

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

77

221

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8edw-assembly1.cif.gz_A cryo-em structure of human abca7 in bpl/ch nanodiscs 0.9543 8 233
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9523 8 230
8ee6-assembly1.cif.gz_A cryo-em structure of human abca7 in pe/ch nanodiscs 0.9507 8 233
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9463 8 230
8eeb-assembly1.cif.gz_A cryo-em structure of human abca7 in digitonin 0.9396 8 230
ID Description Score Start End Superfamily
af_Q58429_1_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9588 8 229 3.40.50.300
af_Q0E8Q7_1247_1483_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9574 9 232 3.40.50.300
af_P36879_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9543 8 233 3.40.50.300
af_E9PWJ7_506_745_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9535 10 230 3.40.50.300
af_A1ZBS3_1241_1472_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9535 12 230 3.40.50.300
ID Description Score Start End GO Terms
AF-N0BIY9-F1-model_v4 ABC-type multidrug transport system, ATPase component 0.9734 11 229 GO:0005524
GO:0016887
AF-A0A0S7XAU1-F1-model_v4 ABC transporter domain-containing protein 0.9682 12 229 GO:0005524
GO:0016887
AF-A0A139WBE8-F1-model_v4 ATP-binding cassette sub-family A member 3-like Protein 0.9681 32 231 GO:0005319
GO:0005524
GO:0006869
GO:0016020
GO:0016887
GO:0042626
GO:0043231
GO:0140359
AF-A0A7T9QHI0-F1-model_v4 deleted 0.9662 12 231
AF-A0A4Q3AX05-F1-model_v4 ATP-binding cassette domain-containing protein 0.9658 8 218 GO:0005524
GO:0016887

Map