F334353

General Info

Members Datasets Scaffolds Average Seq Length
222 130 444 327

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100165305|Ga0075436_1001653051
Length 354
Sequence VNQELRLGTRGSQLALWQANAVAARIAASGGPPCRIVVIRTTGDRLHEAPLSEVGGKRLFVKEIEDALLGGEIDLAVHSSKDMPAVLPGGLAIGAVLPREDPRDAVVLPVMANGSGLMARNAGRHAAADSGHPSFGISHQLSAMTTIDDLVAQLGQSPSIGTGSVRRVAQLTRLFPGATFEPIRGNLDTRLRKLDEGAHHALVLAAAGLRRLGFASRISFALPTEACVPAPGQGIVAVEVRHGDTAVGRLVSRIGDEAAAAALTAERALVQALGGGCQTPVGALASPEDGDTLSLAAVVVALDGSRAVRGQTRGTRADAAQLGTRLGRQLIADGADQILADARRVQGAVEGIQP

Samples

Sample ID Description Type Environment
1 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
93 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
94 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
95 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
96 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
97 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
98 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
102 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
103 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
104 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
105 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
110 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
128 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.35
Rhizosphere 98.65
Stem 0
Stem Tuber 0
Unclassified 3.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075436_100165305 3300006914 Bacteria 1561
2 Ga0065712_10077312 3300005290 Bacteria 3517
3 Ga0070676_10010382 3300005328 Bacteria 5052
4 Ga0070676_10083918 3300005328 Bacteria 1939
5 Ga0070690_100067115 3300005330 Bacteria 2324
6 Ga0070670_100018004 3300005331 Bacteria 6063
7 Ga0070677_10010973 3300005333 Bacteria 3113
8 Ga0070666_10017629 3300005335 Bacteria 4581
9 Ga0068868_100169305 3300005338 Bacteria 1808
10 Ga0070689_100049994 3300005340 Bacteria 3229
11 Ga0070691_10045465 3300005341 Bacteria 2083
12 Ga0070668_100151141 3300005347 Bacteria 1878
13 Ga0070669_100222916 3300005353 Bacteria 1491
14 Ga0070675_100064698 3300005354 Bacteria 3023
15 Ga0070675_100072620 3300005354 Bacteria 2856
16 Ga0070671_100013867 3300005355 Bacteria 6502
17 Ga0070671_100203412 3300005355 Bacteria 1679
18 Ga0070674_100002488 3300005356 Bacteria 10205
19 Ga0070674_100052011 3300005356 Bacteria 2824
20 Ga0070674_100183601 3300005356 Bacteria 1604
21 Ga0070673_100219170 3300005364 Bacteria 1646
22 Ga0070673_100271442 3300005364 Bacteria 1485
23 Ga0070713_100008511 3300005436 Bacteria 7280
24 Ga0070705_100007954 3300005440 Bacteria 5240
25 Ga0070700_100002315 3300005441 Bacteria 9693
26 Ga0070700_100203713 3300005441 Bacteria 1391
27 Ga0070694_100021587 3300005444 Bacteria 4117
28 Ga0070708_100180440 3300005445 Unclassified 1973
29 Ga0070678_100023066 3300005456 Bacteria 4140
30 Ga0070678_100049848 3300005456 Bacteria 3024
31 Ga0070662_100101491 3300005457 Bacteria 2178
32 Ga0068867_100015905 3300005459 Bacteria 5341
33 Ga0070707_100061834 3300005468 Bacteria 3592
34 Ga0070698_100102039 3300005471 Bacteria 2840
35 Ga0070698_100267127 3300005471 Bacteria 1643
36 Ga0070699_100010132 3300005518 Bacteria 8159
37 Ga0070697_100051860 3300005536 Bacteria 3333
38 Ga0070697_100122203 3300005536 Bacteria 2179
39 Ga0070672_100056194 3300005543 Bacteria 3085
40 Ga0070686_100001968 3300005544 Bacteria 11409
41 Ga0070695_100010029 3300005545 Bacteria 5650
42 Ga0070695_100038631 3300005545 Bacteria 3014
43 Ga0070704_100016699 3300005549 Bacteria 4646
44 Ga0070704_100016946 3300005549 Bacteria 4619
45 Ga0068854_100050877 3300005578 Bacteria 2966
46 Ga0068859_100006201 3300005617 Bacteria 12147
47 Ga0068859_100374315 3300005617 Bacteria 1520
48 Ga0068859_100611170 3300005617 Bacteria 1183
49 Ga0068864_100027751 3300005618 Bacteria 4783
50 Ga0068861_100071198 3300005719 Bacteria 2695
51 Ga0068861_100129115 3300005719 Bacteria 2049
52 Ga0068861_100160536 3300005719 Bacteria 1854
53 Ga0068858_100000616 3300005842 Bacteria 37281
54 Ga0068858_100034161 3300005842 Bacteria 4717
55 Ga0068858_100355023 3300005842 Bacteria 1405
56 Ga0068858_100388950 3300005842 Bacteria 1339
57 Ga0068860_100264326 3300005843 Bacteria 1678
58 Ga0068862_100185859 3300005844 Bacteria 1867
59 Ga0081539_10025848 3300005985 Bacteria 3764
60 Ga0075428_100033729 3300006844 Bacteria 5649
61 Ga0075431_100145757 3300006847 Bacteria 2440
62 Ga0075433_10025574 3300006852 Bacteria 4991
63 Ga0075434_100001702 3300006871 Bacteria 18830
64 Ga0075434_100017845 3300006871 Bacteria 6845
65 Ga0075434_100213292 3300006871 Bacteria 1951
66 Ga0075434_100219899 3300006871 Bacteria 1919
67 Ga0075436_100000461 3300006914 Bacteria 26318
68 Ga0075436_100141096 3300006914 Bacteria 1693
69 Ga0097620_100006201 3300006931 Bacteria 12147
70 Ga0097620_100374340 3300006931 Bacteria 1520
71 Ga0097620_100611229 3300006931 Bacteria 1183
72 Ga0075435_100000062 3300007076 Bacteria 55669
73 Ga0075435_100002785 3300007076 Bacteria 11683
74 Ga0075435_100003998 3300007076 Bacteria 10075
75 Ga0075435_100008922 3300007076 Bacteria 7227
76 Ga0075435_100031226 3300007076 Bacteria 4194
77 Ga0105240_10519027 3300009093 Bacteria 1322
78 Ga0111539_10015763 3300009094 Bacteria 9389
79 Ga0111539_10108660 3300009094 Bacteria 3255
80 Ga0105245_10055440 3300009098 Bacteria 3560
81 Ga0105247_10042466 3300009101 Bacteria 2785
82 Ga0114129_10001999 3300009147 Bacteria 27921
83 Ga0114129_10027653 3300009147 Bacteria 8030
84 Ga0114129_10031325 3300009147 Bacteria 7519
85 Ga0114129_10073712 3300009147 Bacteria 4756
86 Ga0114129_10157336 3300009147 Bacteria 3106
87 Ga0114129_10311933 3300009147 Bacteria 2093
88 Ga0114129_10552888 3300009147 Bacteria 1497
89 Ga0105241_10018768 3300009174 Bacteria 5095
90 Ga0105242_10467463 3300009176 Bacteria 1192
91 Ga0105248_10022714 3300009177 Bacteria 6962
92 Ga0105248_10130891 3300009177 Bacteria 2831
93 Ga0105248_10196733 3300009177 Bacteria 2271
94 Ga0105238_10095003 3300009551 Bacteria 2969
95 Ga0157375_10067244 3300013308 Bacteria 3581
96 Ga0157375_10122696 3300013308 Bacteria 2710
97 Ga0163163_10098243 3300014325 Bacteria 2949
98 Ga0163163_10154931 3300014325 Bacteria 2335
99 Ga0157380_10238509 3300014326 Bacteria 1638
100 Ga0157380_10484246 3300014326 Bacteria 1197
101 Ga0157379_10143554 3300014968 Bacteria 2152
102 Ga0163161_10280388 3300017792 Bacteria 1307
103 Ga0207682_10022699 3300025893 Bacteria 2474
104 Ga0207682_10042288 3300025893 Bacteria 1862
105 Ga0207710_10059882 3300025900 Bacteria 1724
106 Ga0207680_10007439 3300025903 Bacteria 5338
107 Ga0207680_10155453 3300025903 Bacteria 1529
108 Ga0207645_10000630 3300025907 Bacteria 29240
109 Ga0207645_10089964 3300025907 Bacteria 1974
110 Ga0207662_10109177 3300025918 Bacteria 1723
111 Ga0207646_10056166 3300025922 Bacteria 3520
112 Ga0207646_10085443 3300025922 Bacteria 2823
113 Ga0207681_10005575 3300025923 Bacteria 7731
114 Ga0207681_10021204 3300025923 Bacteria 4127
115 Ga0207681_10024352 3300025923 Bacteria 3884
116 Ga0207650_10082600 3300025925 Bacteria 2439
117 Ga0207659_10177132 3300025926 Bacteria 1686
118 Ga0207659_10401465 3300025926 Bacteria 1146
119 Ga0207706_10133386 3300025933 Bacteria 2184
120 Ga0207709_10248070 3300025935 Bacteria 1299
121 Ga0207670_10112543 3300025936 Bacteria 1964
122 Ga0207670_10127671 3300025936 Bacteria 1858
123 Ga0207704_10239943 3300025938 Unclassified 1354
124 Ga0207665_10277466 3300025939 Bacteria 1246
125 Ga0207691_10007685 3300025940 Bacteria 10379
126 Ga0207691_10172690 3300025940 Bacteria 1892
127 Ga0207689_10028830 3300025942 Bacteria 4641
128 Ga0207651_10093283 3300025960 Bacteria 2210
129 Ga0207651_10128209 3300025960 Bacteria 1937
130 Ga0207651_10158511 3300025960 Bacteria 1771
131 Ga0207651_10218936 3300025960 Unclassified 1538
132 Ga0207712_10040511 3300025961 Bacteria 3198
133 Ga0207640_10061658 3300025981 Bacteria 2485
134 Ga0207677_10360927 3300026023 Bacteria 1220
135 Ga0207703_10062098 3300026035 Bacteria 3060
136 Ga0207703_10082938 3300026035 Bacteria 2677
137 Ga0207703_10324365 3300026035 Bacteria 1411
138 Ga0207708_10118173 3300026075 Bacteria 2064
139 Ga0207708_10140654 3300026075 Bacteria 1893
140 Ga0207641_10004863 3300026088 Bacteria 11561
141 Ga0207648_10011929 3300026089 Bacteria 8160
142 Ga0207648_10017427 3300026089 Bacteria 6536
143 Ga0207676_10012935 3300026095 Bacteria 5994
144 Ga0207674_10055732 3300026116 Bacteria 4017
145 Ga0207675_100002071 3300026118 Bacteria 19965
146 Ga0207675_100019224 3300026118 Bacteria 6374
147 Ga0207675_100036904 3300026118 Bacteria 4558
148 Ga0207675_100090832 3300026118 Bacteria 2871
149 Ga0207675_100373845 3300026118 Bacteria 1400
150 Ga0207683_10041670 3300026121 Bacteria 4010
151 Ga0207683_10071224 3300026121 Bacteria 3073
152 Ga0207428_10010394 3300027907 Bacteria 8316
153 Ga0207428_10032140 3300027907 Bacteria 4320
154 Ga0268265_10009408 3300028380 Bacteria 6600
155 Ga0268264_10341735 3300028381 Bacteria 1422
156 Ga0373930_0000676 3300034816 Bacteria 4772
157 Ga0373948_0000339 3300034817 Bacteria 5705
158 Ga0373950_0001604 3300034818 Bacteria 2980
159 Ga0373929_0022041 3300035085 Bacteria 1297
160 Ga0373949_0000620 3300035090 Bacteria 11604
161 Ga0373949_0034300 3300035090 Bacteria 1223
162 Ga0373951_0001255 3300035091 Bacteria 6712
163 Ga0373952_0000815 3300035092 Bacteria 5623
164 Ga0373932_0000405 3300035112 Bacteria 13256
165 Ga0373936_0003306 3300035113 Bacteria 6047
166 Ga0373939_0004421 3300035114 Bacteria 3321
167 Ga0373941_0006066 3300035115 Bacteria 2889
168 Ga0373941_0026932 3300035115 Bacteria 1673
169 Ga0373960_0000106 3300035121 Bacteria 13291
170 Ga0373943_0005292 3300035170 Bacteria 5803
171 Ga0373946_0004162 3300035171 Bacteria 5157
172 Ga0373955_0032772 3300035172 Bacteria 2731
173 Ga0373942_0000131 3300035207 Bacteria 17649
174 Ga0373961_0001139 3300035241 Bacteria 8345
175 Ga0373962_0024323 3300035242 Bacteria 1619
176 Ga0373962_0034074 3300035242 Bacteria 1408
177 Ga0373924_0006624 3300035410 Bacteria 4155
178 Ga0373935_0009061 3300035692 Bacteria 5955
179 Ga0373927_0023628 3300035695 Bacteria 4024
180 Ga0373947_0005632 3300035725 Bacteria 7304
181 Ga0373925_0006356 3300037068 Bacteria 8696
182 Ga0451576_0055014 3300045051 Bacteria 4165
183 Ga0451576_0250838 3300045051 Unclassified 1850
184 Ga0495610_0117394 3300046512 Bacteria 1171
185 Ga0495658_0223334 3300046683 Bacteria 1180
186 Ga0496107_0255887 3300048910 Bacteria 1303
187 Ga0496112_0049914 3300048915 Bacteria 4102
188 Ga0496112_0162579 3300048915 Bacteria 2199
189 Ga0501034_0015914 3300049571 Bacteria 7720
190 Ga0501034_0038203 3300049571 Bacteria 4862
191 Ga0501043_0044814 3300049579 Bacteria 3478
192 Ga0501047_0017209 3300049581 Bacteria 6920
193 Ga0501047_0075011 3300049581 Bacteria 3255
194 Ga0501044_0022306 3300049823 Bacteria 6747
195 nmdc:mga05p37_13196_c1 3300050507 Bacteria 9889
196 nmdc:mga05p37_14038_c1 3300050507 Bacteria 9609
197 nmdc:mga05p37_21451_c1 3300050507 Bacteria 7823
198 nmdc:mga05p37_25338_c1 3300050507 Bacteria 7214
199 nmdc:mga05p37_268634_c1 3300050507 Bacteria 2039
200 nmdc:mga05p37_312017_c1 3300050507 Bacteria 1864
201 nmdc:mga05p37_448580_c1 3300050507 Bacteria 1494
202 nmdc:mga05p37_61099_c1 3300050507 Bacteria 4639
203 nmdc:mga05p37_630378_c1 3300050507 Bacteria 1205
204 nmdc:mga08y16_34351_c1 3300050511 Bacteria 5327
205 nmdc:mga08y16_4533_c1 3300050511 Bacteria 14481
206 nmdc:mga0n895_20136_c1 3300050512 Bacteria 6215
207 nmdc:mga0n895_206748_c1 3300050512 Unclassified 1994
208 nmdc:mga0n895_264_c1 3300050512 Bacteria 34123
209 nmdc:mga0n895_284334_c1 3300050512 Unclassified 1677
210 nmdc:mga0n895_351166_c1 3300050512 Bacteria 1494
211 nmdc:mga0n895_95241_c1 3300050512 Bacteria 2982
212 nmdc:mga0n895_95761_c1 3300050512 Unclassified 2973
213 nmdc:mga0rr50_141525_c1 3300050513 Unclassified 1936
214 nmdc:mga0rr50_6682_c1 3300050513 Bacteria 7054
215 nmdc:mga0rr50_77_c1 3300050513 Bacteria 55683
216 nmdc:mga0rr50_917_c1 3300050513 Bacteria 15946
217 nmdc:mga08x19_228820_c1 3300050514 Bacteria 1279
218 nmdc:mga08x19_289_c1 3300050514 Bacteria 37059
219 nmdc:mga0a205_10460_c1 3300050515 Bacteria 8523
220 nmdc:mga0a205_5231_c1 3300050515 Bacteria 11672
221 Ga0501082_0039288 3300060353 Bacteria 4083
222 Ga0501082_0242026 3300060353 Bacteria 1570
223 Ga0075436_100165305
224 Ga0065712_10077312
225 Ga0070676_10010382
226 Ga0070676_10083918
227 Ga0070690_100067115
228 Ga0070670_100018004
229 Ga0070677_10010973
230 Ga0070666_10017629
231 Ga0068868_100169305
232 Ga0070689_100049994
233 Ga0070691_10045465
234 Ga0070668_100151141
235 Ga0070669_100222916
236 Ga0070675_100064698
237 Ga0070675_100072620
238 Ga0070671_100013867
239 Ga0070671_100203412
240 Ga0070674_100002488
241 Ga0070674_100052011
242 Ga0070674_100183601
243 Ga0070673_100219170
244 Ga0070673_100271442
245 Ga0070713_100008511
246 Ga0070705_100007954
247 Ga0070700_100002315
248 Ga0070700_100203713
249 Ga0070694_100021587
250 Ga0070708_100180440
251 Ga0070678_100023066
252 Ga0070678_100049848
253 Ga0070662_100101491
254 Ga0068867_100015905
255 Ga0070707_100061834
256 Ga0070698_100102039
257 Ga0070698_100267127
258 Ga0070699_100010132
259 Ga0070697_100051860
260 Ga0070697_100122203
261 Ga0070672_100056194
262 Ga0070686_100001968
263 Ga0070695_100010029
264 Ga0070695_100038631
265 Ga0070704_100016699
266 Ga0070704_100016946
267 Ga0068854_100050877
268 Ga0068859_100006201
269 Ga0068859_100374315
270 Ga0068859_100611170
271 Ga0068864_100027751
272 Ga0068861_100071198
273 Ga0068861_100129115
274 Ga0068861_100160536
275 Ga0068858_100000616
276 Ga0068858_100034161
277 Ga0068858_100355023
278 Ga0068858_100388950
279 Ga0068860_100264326
280 Ga0068862_100185859
281 Ga0081539_10025848
282 Ga0075428_100033729
283 Ga0075431_100145757
284 Ga0075433_10025574
285 Ga0075434_100001702
286 Ga0075434_100017845
287 Ga0075434_100213292
288 Ga0075434_100219899
289 Ga0075436_100000461
290 Ga0075436_100141096
291 Ga0097620_100006201
292 Ga0097620_100374340
293 Ga0097620_100611229
294 Ga0075435_100000062
295 Ga0075435_100002785
296 Ga0075435_100003998
297 Ga0075435_100008922
298 Ga0075435_100031226
299 Ga0105240_10519027
300 Ga0111539_10015763
301 Ga0111539_10108660
302 Ga0105245_10055440
303 Ga0105247_10042466
304 Ga0114129_10001999
305 Ga0114129_10027653
306 Ga0114129_10031325
307 Ga0114129_10073712
308 Ga0114129_10157336
309 Ga0114129_10311933
310 Ga0114129_10552888
311 Ga0105241_10018768
312 Ga0105242_10467463
313 Ga0105248_10022714
314 Ga0105248_10130891
315 Ga0105248_10196733
316 Ga0105238_10095003
317 Ga0157375_10067244
318 Ga0157375_10122696
319 Ga0163163_10098243
320 Ga0163163_10154931
321 Ga0157380_10238509
322 Ga0157380_10484246
323 Ga0157379_10143554
324 Ga0163161_10280388
325 Ga0207682_10022699
326 Ga0207682_10042288
327 Ga0207710_10059882
328 Ga0207680_10007439
329 Ga0207680_10155453
330 Ga0207645_10000630
331 Ga0207645_10089964
332 Ga0207662_10109177
333 Ga0207646_10056166
334 Ga0207646_10085443
335 Ga0207681_10005575
336 Ga0207681_10021204
337 Ga0207681_10024352
338 Ga0207650_10082600
339 Ga0207659_10177132
340 Ga0207659_10401465
341 Ga0207706_10133386
342 Ga0207709_10248070
343 Ga0207670_10112543
344 Ga0207670_10127671
345 Ga0207704_10239943
346 Ga0207665_10277466
347 Ga0207691_10007685
348 Ga0207691_10172690
349 Ga0207689_10028830
350 Ga0207651_10093283
351 Ga0207651_10128209
352 Ga0207651_10158511
353 Ga0207651_10218936
354 Ga0207712_10040511
355 Ga0207640_10061658
356 Ga0207677_10360927
357 Ga0207703_10062098
358 Ga0207703_10082938
359 Ga0207703_10324365
360 Ga0207708_10118173
361 Ga0207708_10140654
362 Ga0207641_10004863
363 Ga0207648_10011929
364 Ga0207648_10017427
365 Ga0207676_10012935
366 Ga0207674_10055732
367 Ga0207675_100002071
368 Ga0207675_100019224
369 Ga0207675_100036904
370 Ga0207675_100090832
371 Ga0207675_100373845
372 Ga0207683_10041670
373 Ga0207683_10071224
374 Ga0207428_10010394
375 Ga0207428_10032140
376 Ga0268265_10009408
377 Ga0268264_10341735
378 Ga0373930_0000676
379 Ga0373948_0000339
380 Ga0373950_0001604
381 Ga0373929_0022041
382 Ga0373949_0000620
383 Ga0373949_0034300
384 Ga0373951_0001255
385 Ga0373952_0000815
386 Ga0373932_0000405
387 Ga0373936_0003306
388 Ga0373939_0004421
389 Ga0373941_0006066
390 Ga0373941_0026932
391 Ga0373960_0000106
392 Ga0373943_0005292
393 Ga0373946_0004162
394 Ga0373955_0032772
395 Ga0373942_0000131
396 Ga0373961_0001139
397 Ga0373962_0024323
398 Ga0373962_0034074
399 Ga0373924_0006624
400 Ga0373935_0009061
401 Ga0373927_0023628
402 Ga0373947_0005632
403 Ga0373925_0006356
404 Ga0451576_0055014
405 Ga0451576_0250838
406 Ga0495610_0117394
407 Ga0495658_0223334
408 Ga0496107_0255887
409 Ga0496112_0049914
410 Ga0496112_0162579
411 Ga0501034_0015914
412 Ga0501034_0038203
413 Ga0501043_0044814
414 Ga0501047_0017209
415 Ga0501047_0075011
416 Ga0501044_0022306
417 nmdc:mga05p37_13196_c1
418 nmdc:mga05p37_14038_c1
419 nmdc:mga05p37_21451_c1
420 nmdc:mga05p37_25338_c1
421 nmdc:mga05p37_268634_c1
422 nmdc:mga05p37_312017_c1
423 nmdc:mga05p37_448580_c1
424 nmdc:mga05p37_61099_c1
425 nmdc:mga05p37_630378_c1
426 nmdc:mga08y16_34351_c1
427 nmdc:mga08y16_4533_c1
428 nmdc:mga0n895_20136_c1
429 nmdc:mga0n895_206748_c1
430 nmdc:mga0n895_264_c1
431 nmdc:mga0n895_284334_c1
432 nmdc:mga0n895_351166_c1
433 nmdc:mga0n895_95241_c1
434 nmdc:mga0n895_95761_c1
435 nmdc:mga0rr50_141525_c1
436 nmdc:mga0rr50_6682_c1
437 nmdc:mga0rr50_77_c1
438 nmdc:mga0rr50_917_c1
439 nmdc:mga08x19_228820_c1
440 nmdc:mga08x19_289_c1
441 nmdc:mga0a205_10460_c1
442 nmdc:mga0a205_5231_c1
443 Ga0501082_0039288
444 Ga0501082_0242026

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01379

Porphobil_deam

Porphobilinogen deaminase, dipyromethane cofactor binding domain

5

249

0.92

PF03900

Porphobil_deamC

Porphobilinogen deaminase, C-terminal domain

260

332

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ov5-assembly1.cif.gz_A bacillus megaterium porphobilinogen deaminase d82e mutant 0.9529 7 331
5ov6-assembly1.cif.gz_A bacillus megaterium porphobilinogen deaminase d82n mutant 0.9525 7 331
4mlq-assembly1.cif.gz_A crystal structure of bacillus megaterium porphobilinogen deaminase 0.9484 7 332
1ah5-assembly1.cif.gz_A reduced form selenomethionine-labelled hydroxymethylbilane synthase determined by mad 0.9433 9 332
5h6o-assembly1.cif.gz_A porphobilinogen deaminase from vibrio cholerae 0.9428 7 325
ID Description Score Start End Superfamily
af_Q54P93_232_322_3.30.160.40 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9706 247 327 3.30.160.40
5h6oA03 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9618 242 325 3.30.160.40
5ov6A03 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9586 242 327 3.30.160.40
5h6oA03 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9507 242 325 3.30.160.40
af_O34090_221_303_3.30.160.40 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9506 244 326 3.30.160.40
ID Description Score Start End GO Terms
AF-A0A852ZGE5-F1-model_v4 hydroxymethylbilane synthase (EC 2.5.1.61) 0.9817 184 329 GO:0004418
GO:0005737
GO:0006783
AF-A0A2V8BNX9-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9809 62 332 GO:0004418
GO:0005737
GO:0006783
AF-A0A2V8GET4-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9797 58 331 GO:0004418
GO:0005737
GO:0006783
AF-A0A1C5CFH9-F1-model_v4 Hydroxymethylbilane synthase 0.9744 244 331 GO:0004418
GO:0005737
GO:0006783
AF-A0A2J7Z9A4-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9734 147 331 GO:0004418
GO:0005737
GO:0006783

Map