F333071

General Info

Members Datasets Scaffolds Average Seq Length
221 116 438 848

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100007341|Ga0070713_1000073414
Length 915
Sequence LTARALAWYRGRWCPDCATGARGVRRRSQGRPLTVAPAAPRLIDRGDLVAALDRAATRKVTIISAPPGSGKTSLLRSWADRPGQPRQLAVVRMQRDQQDAQQFWLALLDAVRHVSGASSGAERPAATPDFNAPAMVDRVLSELAGPRSGITLVIEDLHELTSTEALAQLTRLLTNLPPRVHAILTTRHDVRLRLHQLRLAGELAEIRAADLRFSERETSELLDASGIALSAAGAALLHQRTEGWAAGLRLAAISLTGHPDPERFVAEFSGSDRTVAEYLLAEMLDRQPPDVQDLLLRTSLLDRVNGELADVLAGRPGSERILLDLEDANTFVESLDSERTWFRYHHLLADFLRLELRRTLPDQVPALHRRAAEWYIRQGLAVEAIRHTQAAGDWPEAARLLADHAFSLTLDGQAQTLQALVRAFLPGADHPELALVRAMGDLAQGRLDGAAAHLAVAEAHVRATPPDRRRRLGVAIASLQLALARRRGDLAGVIEHVRFLDSPLTGPSDEDIALGSDLRAVALMNLGTAEAWTLGLPDAPDAERHLREGADLARKIGRPYLEVGCLAQLGFASLVLHSFATTQRRCREAIALAERYGWGTEPVIAPALIMLAGTLVWTGEFDECERWLQRTRRALQTDTGPDIRLLLHQTAGILHAGRGRLHEAFEELGAAEDLGSQLADSQALASRATRWLPATQARLGMTGEARAFIAALDDEQASSGEIRNARAVICLAEGDPAAALAAVADVLDGTAPVTGYVTVMEAQLLAGLAHRELGDQLAANQAAERALALAESDRLVLPFAMTGSRELLEALPRHQTAHAALLADILDVLHGASLAAKDRSWLPPAEELSPGELRVLRYLPTNLSRPAIAGELSVSPNTVNAHIRSIYAKLSVRDRASAVQRARELRLLAAAGRTR

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
23 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
38 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
48 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
49 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
50 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
51 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
52 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
53 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
54 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
55 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
56 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
57 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
58 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
59 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
62 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
63 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
64 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
65 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
66 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
67 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
68 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
69 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
70 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
71 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
76 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
77 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
84 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
92 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
100 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
112 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
113 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
114 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0
Isolates 0.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.24
Rhizosphere 92.31
Stem 0
Stem Tuber 0
Unclassified 0.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100007341 3300005436 Bacteria 7727
2 Ga0070709_10002329 3300005434 Bacteria 10295
3 Ga0070709_10003556 3300005434 Bacteria 8373
4 Ga0070709_10016163 3300005434 Bacteria 4255
5 Ga0070709_10026683 3300005434 Bacteria 3426
6 Ga0070714_100005378 3300005435 Bacteria 9772
7 Ga0070714_100011224 3300005435 Bacteria 7104
8 Ga0070714_100030664 3300005435 Bacteria 4478
9 Ga0070713_100003205 3300005436 Bacteria 10771
10 Ga0070713_100004077 3300005436 Bacteria 9729
11 Ga0070710_10002552 3300005437 Bacteria 8640
12 Ga0070710_10003326 3300005437 Bacteria 7630
13 Ga0070710_10007394 3300005437 Bacteria 5317
14 Ga0070711_100001617 3300005439 Bacteria 12437
15 Ga0070708_100012101 3300005445 Bacteria 7033
16 Ga0070708_100036744 3300005445 Bacteria 4273
17 Ga0070706_100039575 3300005467 Bacteria 4352
18 Ga0070706_100078661 3300005467 Bacteria 3053
19 Ga0070707_100003102 3300005468 Bacteria 15732
20 Ga0070707_100007822 3300005468 Bacteria 9926
21 Ga0070707_100035865 3300005468 Bacteria 4731
22 Ga0070707_100065796 3300005468 Bacteria 3483
23 Ga0070698_100001890 3300005471 Bacteria 23323
24 Ga0070698_100022690 3300005471 Bacteria 6563
25 Ga0070698_100054872 3300005471 Bacteria 4044
26 Ga0070699_100006101 3300005518 Bacteria 10545
27 Ga0070699_100036053 3300005518 Bacteria 4277
28 Ga0070697_100002795 3300005536 Bacteria 13443
29 Ga0070697_100015107 3300005536 Bacteria 6063
30 Ga0068856_100022286 3300005614 Bacteria 6159
31 Ga0070717_10006241 3300006028 Bacteria 8755
32 Ga0070717_10016001 3300006028 Bacteria 5807
33 Ga0070716_100005716 3300006173 Bacteria 6040
34 Ga0070716_100013377 3300006173 Bacteria 4180
35 Ga0070712_100003688 3300006175 Bacteria 9439
36 Ga0070712_100016659 3300006175 Bacteria 4749
37 Ga0070712_100027628 3300006175 Bacteria 3790
38 Ga0097621_100030571 3300006237 Bacteria 4265
39 Ga0075433_10007006 3300006852 Bacteria 8934
40 Ga0075433_10054653 3300006852 Bacteria 3483
41 Ga0075434_100018603 3300006871 Bacteria 6713
42 Ga0075434_100039757 3300006871 Bacteria 4659
43 Ga0075434_100077113 3300006871 Bacteria 3328
44 Ga0075436_100036664 3300006914 Bacteria 3385
45 Ga0075435_100033068 3300007076 Bacteria 4087
46 Ga0114129_10013166 3300009147 Bacteria 11786
47 Ga0157376_10055955 3300014969 Bacteria 3293
48 Ga0207692_10001484 3300025898 Bacteria 8799
49 Ga0207692_10003584 3300025898 Bacteria 6076
50 Ga0207685_10000265 3300025905 Bacteria 8269
51 Ga0207699_10002090 3300025906 Bacteria 9436
52 Ga0207699_10002867 3300025906 Bacteria 8169
53 Ga0207699_10003405 3300025906 Bacteria 7587
54 Ga0207699_10003524 3300025906 Bacteria 7466
55 Ga0207699_10004296 3300025906 Bacteria 6814
56 Ga0207699_10012030 3300025906 Bacteria 4391
57 Ga0207684_10002265 3300025910 Bacteria 19608
58 Ga0207684_10003301 3300025910 Bacteria 15833
59 Ga0207684_10012511 3300025910 Bacteria 7378
60 Ga0207684_10039699 3300025910 Unclassified 3991
61 Ga0207693_10008646 3300025915 Bacteria 8331
62 Ga0207693_10013587 3300025915 Bacteria 6561
63 Ga0207693_10023129 3300025915 Bacteria 4935
64 Ga0207693_10036115 3300025915 Bacteria 3895
65 Ga0207693_10042825 3300025915 Bacteria 3564
66 Ga0207663_10004122 3300025916 Bacteria 7199
67 Ga0207663_10008661 3300025916 Bacteria 5337
68 Ga0207663_10013294 3300025916 Bacteria 4470
69 Ga0207646_10008823 3300025922 Bacteria 10054
70 Ga0207646_10028855 3300025922 Bacteria 5048
71 Ga0207646_10058870 3300025922 Bacteria 3431
72 Ga0207700_10004555 3300025928 Bacteria 8193
73 Ga0207700_10018960 3300025928 Bacteria 4637
74 Ga0207664_10004073 3300025929 Bacteria 9850
75 Ga0207664_10006772 3300025929 Bacteria 7915
76 Ga0207664_10016301 3300025929 Bacteria 5419
77 Ga0207706_10075812 3300025933 Bacteria 2958
78 Ga0207665_10001652 3300025939 Bacteria 15008
79 Ga0207665_10006040 3300025939 Bacteria 8046
80 Ga0207641_10047925 3300026088 Bacteria 3605
81 Ga0207674_10013776 3300026116 Bacteria 8947
82 Ga0207428_10006356 3300027907 Bacteria 10928
83 Ga0265326_10001598 3300028558 Bacteria 7891
84 Ga0265319_1005450 3300028563 Bacteria 6083
85 Ga0265334_10000404 3300028573 Bacteria 22692
86 Ga0265322_10000925 3300028654 Bacteria 10288
87 Ga0265338_10003015 3300028800 Bacteria 24305
88 Ga0265332_10001287 3300031238 Bacteria 14330
89 Ga0265316_10018057 3300031344 Bacteria 6076
90 Ga0265314_10002086 3300031711 Bacteria 21053
91 Ga0265342_10002912 3300031712 Bacteria 14441
92 Ga0307409_100017413 3300031995 Bacteria 4789
93 Ga0373926_0000498 3300035083 Bacteria 10440
94 Ga0373934_0004389 3300035086 Bacteria 5212
95 Ga0373944_0000292 3300035089 Bacteria 11131
96 Ga0373923_0001693 3300035111 Bacteria 6455
97 Ga0373936_0001751 3300035113 Bacteria 7967
98 Ga0373936_0002499 3300035113 Bacteria 6891
99 Ga0373941_0001369 3300035115 Bacteria 5140
100 Ga0373954_0019274 3300035118 Bacteria 3076
101 Ga0373943_0002910 3300035170 Bacteria 7770
102 Ga0373943_0018218 3300035170 Bacteria 3224
103 Ga0373946_0001898 3300035171 Bacteria 7285
104 Ga0373962_0001188 3300035242 Bacteria 6091
105 Ga0373924_0002431 3300035410 Bacteria 6267
106 Ga0373931_0024968 3300035691 Bacteria 3033
107 Ga0373935_0004268 3300035692 Bacteria 8381
108 Ga0373935_0015133 3300035692 Bacteria 4659
109 Ga0373947_0001775 3300035725 Bacteria 13202
110 Ga0495592_0004407 3300046454 Bacteria 10300
111 Ga0495603_0002731 3300046455 Bacteria 10404
112 Ga0495603_0004016 3300046455 Bacteria 8759
113 Ga0495603_0009993 3300046455 Bacteria 5742
114 Ga0495641_0003030 3300046461 Bacteria 12850
115 Ga0495651_0003185 3300046462 Bacteria 12611
116 Ga0495651_0008402 3300046462 Bacteria 7910
117 Ga0495653_0042213 3300046463 Bacteria 3554
118 Ga0495580_0007193 3300046472 Bacteria 8959
119 Ga0495582_0000507 3300046473 Bacteria 21390
120 Ga0495582_0008344 3300046473 Bacteria 5716
121 Ga0495582_0010431 3300046473 Bacteria 5112
122 Ga0495639_0000542 3300046475 Bacteria 17667
123 Ga0495664_0014524 3300046477 Bacteria 4466
124 Ga0495594_0000688 3300046499 Bacteria 17429
125 Ga0495608_0023174 3300046511 Bacteria 4256
126 Ga0495618_0006077 3300046514 Bacteria 7325
127 Ga0495628_0026730 3300046516 Bacteria 4700
128 Ga0495628_0076348 3300046516 Bacteria 2607
129 Ga0495630_0019142 3300046517 Bacteria 5032
130 Ga0495630_0067829 3300046517 Bacteria 2681
131 Ga0495666_0011296 3300046526 Bacteria 4453
132 Ga0495666_0020132 3300046526 Bacteria 3309
133 Ga0495652_0007644 3300046529 Bacteria 9954
134 Ga0495652_0031271 3300046529 Bacteria 4662
135 Ga0495652_0032856 3300046529 Bacteria 4535
136 Ga0495652_0039148 3300046529 Bacteria 4100
137 Ga0495652_0053261 3300046529 Bacteria 3449
138 Ga0495665_0002283 3300046531 Bacteria 10364
139 Ga0495640_0015244 3300046533 Bacteria 5786
140 Ga0495640_0015400 3300046533 Bacteria 5756
141 Ga0495587_0014266 3300046536 Bacteria 4986
142 Ga0495645_0004966 3300046543 Bacteria 9105
143 Ga0495645_0015212 3300046543 Bacteria 5471
144 Ga0495645_0027793 3300046543 Bacteria 4110
145 Ga0495622_0000291 3300046557 Bacteria 37888
146 Ga0495667_0012278 3300046559 Bacteria 5806
147 Ga0495667_0020595 3300046559 Bacteria 4449
148 Ga0495667_0031140 3300046559 Bacteria 3582
149 Ga0495634_0001026 3300046642 Bacteria 26199
150 Ga0495634_0025155 3300046642 Bacteria 4171
151 Ga0495634_0028509 3300046642 Bacteria 3874
152 Ga0495634_0035396 3300046642 Bacteria 3420
153 Ga0495635_0004803 3300046663 Bacteria 9397
154 Ga0495635_0009916 3300046663 Bacteria 6658
155 Ga0495635_0012502 3300046663 Bacteria 5947
156 Ga0495657_0004393 3300046675 Bacteria 11252
157 Ga0495599_0002170 3300046678 Bacteria 11408
158 Ga0495599_0017786 3300046678 Bacteria 4424
159 Ga0495623_0010893 3300046679 Bacteria 5888
160 Ga0495623_0031965 3300046679 Bacteria 3383
161 Ga0495646_0012463 3300046680 Bacteria 5406
162 Ga0495646_0015860 3300046680 Bacteria 4784
163 Ga0495658_0002611 3300046683 Bacteria 9055
164 Ga0495658_0013395 3300046683 Bacteria 4173
165 Ga0495613_0007649 3300046689 Bacteria 8041
166 Ga0495613_0012781 3300046689 Bacteria 6242
167 Ga0495624_0017670 3300046690 Bacteria 4783
168 Ga0495581_0001278 3300047315 Bacteria 13861
169 Ga0495581_0003909 3300047315 Bacteria 8574
170 Ga0495581_0011647 3300047315 Bacteria 5089
171 Ga0495674_0000743 3300047319 Bacteria 30799
172 Ga0495674_0016112 3300047319 Bacteria 6976
173 Ga0495674_0023228 3300047319 Bacteria 5716
174 Ga0495674_0078656 3300047319 Bacteria 2833
175 Ga0495676_0025615 3300047321 Bacteria 5089
176 Ga0495680_0006000 3300047322 Bacteria 11360
177 Ga0495680_0022969 3300047322 Bacteria 5191
178 Ga0495680_0039947 3300047322 Bacteria 3739
179 Ga0495687_018199 3300047443 Bacteria 3478
180 Ga0495675_0008844 3300047444 Bacteria 6252
181 Ga0495675_0020506 3300047444 Bacteria 4205
182 Ga0495684_0000915 3300047471 Bacteria 23961
183 Ga0495684_0007656 3300047471 Bacteria 8356
184 Ga0495684_0033111 3300047471 Bacteria 3967
185 Ga0495593_0001076 3300047673 Bacteria 15949
186 Ga0495593_0012678 3300047673 Bacteria 4813
187 Ga0495593_0013779 3300047673 Bacteria 4605
188 Ga0495614_0002960 3300048089 Bacteria 7571
189 Ga0496102_0020169 3300048905 Bacteria 5886
190 Ga0496102_0036421 3300048905 Bacteria 4432
191 Ga0496106_0016789 3300048909 Bacteria 5416
192 Ga0496106_0034388 3300048909 Unclassified 3784
193 Ga0496107_0033387 3300048910 Bacteria 3681
194 Ga0496108_0011733 3300048911 Bacteria 7126
195 Ga0496108_0105016 3300048911 Bacteria 2411
196 Ga0496109_0032659 3300048912 Bacteria 4680
197 Ga0496109_0046649 3300048912 Bacteria 3936
198 Ga0496110_0004981 3300048913 Bacteria 10369
199 Ga0496110_0009446 3300048913 Bacteria 7898
200 Ga0496112_0001036 3300048915 Bacteria 20470
201 Ga0496112_0010009 3300048915 Bacteria 8582
202 Ga0496112_0034933 3300048915 Bacteria 4892
203 Ga0496113_0010661 3300048916 Bacteria 6086
204 Ga0496114_0015254 3300048917 Bacteria 6177
205 nmdc:mga0n895_150480_c1 3300050512 Bacteria 2358
206 nmdc:mga0n895_4958_c1 3300050512 Bacteria 11044
207 nmdc:mga0n895_52127_c1 3300050512 Bacteria 4015
208 nmdc:mga08x19_25984_c1 3300050514 Bacteria 3651
209 nmdc:mga08x19_40932_c1 3300050514 Bacteria 2951
210 nmdc:mga0a205_19492_c1 3300050515 Bacteria 6396
211 nmdc:mga0a205_4925_c1 3300050515 Bacteria 12014
212 nmdc:mga0a205_69521_c1 3300050515 Bacteria 3400
213 nmdc:mga0a205_75486_c1 3300050515 Bacteria 3257
214 Ga0495601_0000202 3300053077 Bacteria 31743
215 Ga0495601_0006171 3300053077 Bacteria 6993
216 Ga0495601_0017528 3300053077 Bacteria 4348
217 Ga0495595_0002434 3300053084 Bacteria 7270
218 Ga0495619_0007126 3300053085 Bacteria 7077
219 8055181164 8055172936 Bacteria 9305943
220 Ga0070713_100007341
221 Ga0070709_10002329
222 Ga0070709_10003556
223 Ga0070709_10016163
224 Ga0070709_10026683
225 Ga0070714_100005378
226 Ga0070714_100011224
227 Ga0070714_100030664
228 Ga0070713_100003205
229 Ga0070713_100004077
230 Ga0070710_10002552
231 Ga0070710_10003326
232 Ga0070710_10007394
233 Ga0070711_100001617
234 Ga0070708_100012101
235 Ga0070708_100036744
236 Ga0070706_100039575
237 Ga0070706_100078661
238 Ga0070707_100003102
239 Ga0070707_100007822
240 Ga0070707_100035865
241 Ga0070707_100065796
242 Ga0070698_100001890
243 Ga0070698_100022690
244 Ga0070698_100054872
245 Ga0070699_100006101
246 Ga0070699_100036053
247 Ga0070697_100002795
248 Ga0070697_100015107
249 Ga0068856_100022286
250 Ga0070717_10006241
251 Ga0070717_10016001
252 Ga0070716_100005716
253 Ga0070716_100013377
254 Ga0070712_100003688
255 Ga0070712_100016659
256 Ga0070712_100027628
257 Ga0097621_100030571
258 Ga0075433_10007006
259 Ga0075433_10054653
260 Ga0075434_100018603
261 Ga0075434_100039757
262 Ga0075434_100077113
263 Ga0075436_100036664
264 Ga0075435_100033068
265 Ga0114129_10013166
266 Ga0157376_10055955
267 Ga0207692_10001484
268 Ga0207692_10003584
269 Ga0207685_10000265
270 Ga0207699_10002090
271 Ga0207699_10002867
272 Ga0207699_10003405
273 Ga0207699_10003524
274 Ga0207699_10004296
275 Ga0207699_10012030
276 Ga0207684_10002265
277 Ga0207684_10003301
278 Ga0207684_10012511
279 Ga0207684_10039699
280 Ga0207693_10008646
281 Ga0207693_10013587
282 Ga0207693_10023129
283 Ga0207693_10036115
284 Ga0207693_10042825
285 Ga0207663_10004122
286 Ga0207663_10008661
287 Ga0207663_10013294
288 Ga0207646_10008823
289 Ga0207646_10028855
290 Ga0207646_10058870
291 Ga0207700_10004555
292 Ga0207700_10018960
293 Ga0207664_10004073
294 Ga0207664_10006772
295 Ga0207664_10016301
296 Ga0207706_10075812
297 Ga0207665_10001652
298 Ga0207665_10006040
299 Ga0207641_10047925
300 Ga0207674_10013776
301 Ga0207428_10006356
302 Ga0265326_10001598
303 Ga0265319_1005450
304 Ga0265334_10000404
305 Ga0265322_10000925
306 Ga0265338_10003015
307 Ga0265332_10001287
308 Ga0265316_10018057
309 Ga0265314_10002086
310 Ga0265342_10002912
311 Ga0307409_100017413
312 Ga0373926_0000498
313 Ga0373934_0004389
314 Ga0373944_0000292
315 Ga0373923_0001693
316 Ga0373936_0001751
317 Ga0373936_0002499
318 Ga0373941_0001369
319 Ga0373954_0019274
320 Ga0373943_0002910
321 Ga0373943_0018218
322 Ga0373946_0001898
323 Ga0373962_0001188
324 Ga0373924_0002431
325 Ga0373931_0024968
326 Ga0373935_0004268
327 Ga0373935_0015133
328 Ga0373947_0001775
329 Ga0495592_0004407
330 Ga0495603_0002731
331 Ga0495603_0004016
332 Ga0495603_0009993
333 Ga0495641_0003030
334 Ga0495651_0003185
335 Ga0495651_0008402
336 Ga0495653_0042213
337 Ga0495580_0007193
338 Ga0495582_0000507
339 Ga0495582_0008344
340 Ga0495582_0010431
341 Ga0495639_0000542
342 Ga0495664_0014524
343 Ga0495594_0000688
344 Ga0495608_0023174
345 Ga0495618_0006077
346 Ga0495628_0026730
347 Ga0495628_0076348
348 Ga0495630_0019142
349 Ga0495630_0067829
350 Ga0495666_0011296
351 Ga0495666_0020132
352 Ga0495652_0007644
353 Ga0495652_0031271
354 Ga0495652_0032856
355 Ga0495652_0039148
356 Ga0495652_0053261
357 Ga0495665_0002283
358 Ga0495640_0015244
359 Ga0495640_0015400
360 Ga0495587_0014266
361 Ga0495645_0004966
362 Ga0495645_0015212
363 Ga0495645_0027793
364 Ga0495622_0000291
365 Ga0495667_0012278
366 Ga0495667_0020595
367 Ga0495667_0031140
368 Ga0495634_0001026
369 Ga0495634_0025155
370 Ga0495634_0028509
371 Ga0495634_0035396
372 Ga0495635_0004803
373 Ga0495635_0009916
374 Ga0495635_0012502
375 Ga0495657_0004393
376 Ga0495599_0002170
377 Ga0495599_0017786
378 Ga0495623_0010893
379 Ga0495623_0031965
380 Ga0495646_0012463
381 Ga0495646_0015860
382 Ga0495658_0002611
383 Ga0495658_0013395
384 Ga0495613_0007649
385 Ga0495613_0012781
386 Ga0495624_0017670
387 Ga0495581_0001278
388 Ga0495581_0003909
389 Ga0495581_0011647
390 Ga0495674_0000743
391 Ga0495674_0016112
392 Ga0495674_0023228
393 Ga0495674_0078656
394 Ga0495676_0025615
395 Ga0495680_0006000
396 Ga0495680_0022969
397 Ga0495680_0039947
398 Ga0495687_018199
399 Ga0495675_0008844
400 Ga0495675_0020506
401 Ga0495684_0000915
402 Ga0495684_0007656
403 Ga0495684_0033111
404 Ga0495593_0001076
405 Ga0495593_0012678
406 Ga0495593_0013779
407 Ga0495614_0002960
408 Ga0496102_0020169
409 Ga0496102_0036421
410 Ga0496106_0016789
411 Ga0496106_0034388
412 Ga0496107_0033387
413 Ga0496108_0011733
414 Ga0496108_0105016
415 Ga0496109_0032659
416 Ga0496109_0046649
417 Ga0496110_0004981
418 Ga0496110_0009446
419 Ga0496112_0001036
420 Ga0496112_0010009
421 Ga0496112_0034933
422 Ga0496113_0010661
423 Ga0496114_0015254
424 nmdc:mga0n895_150480_c1
425 nmdc:mga0n895_4958_c1
426 nmdc:mga0n895_52127_c1
427 nmdc:mga08x19_25984_c1
428 nmdc:mga08x19_40932_c1
429 nmdc:mga0a205_19492_c1
430 nmdc:mga0a205_4925_c1
431 nmdc:mga0a205_69521_c1
432 nmdc:mga0a205_75486_c1
433 Ga0495601_0000202
434 Ga0495601_0006171
435 Ga0495601_0017528
436 Ga0495595_0002434
437 Ga0495619_0007126
438 8055181164

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

846

902

0.96

PF13401

AAA_22

AAA domain

54

194

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1fse-assembly2.cif.gz_C crystal structure of the bacillus subtilis regulatory protein gere 0.9413 793 851
3clo-assembly1.cif.gz_B crystal structure of putative transcriptional regulator containing a luxr dna binding domain (np_811094.1) from bacteroides thetaiotaomicron vpi-5482 at 2.04 a resolution 0.9264 793 853
3clo-assembly2.cif.gz_C-2 crystal structure of putative transcriptional regulator containing a luxr dna binding domain (np_811094.1) from bacteroides thetaiotaomicron vpi-5482 at 2.04 a resolution 0.9229 793 853
1fse-assembly1.cif.gz_A crystal structure of the bacillus subtilis regulatory protein gere 0.9219 793 852
7x1k-assembly1.cif.gz_B crystal structure of the flagellar expression regulator degu from listeria monocytogenes 0.9212 789 852
ID Description Score Start End Superfamily
4hyeA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9274 793 849 1.10.10.10
6jqsA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9029 793 854 1.10.10.10
2wqhA00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8782 549 652 1.25.40.10
5c1dA01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8749 549 651 1.25.40.10
3pe3C01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8701 546 651 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A4R4NHS3-F1-model_v4 Tetratricopeptide repeat protein 0.9194 506 691
AF-A0A4R4NHS3-F1-model_v4 Tetratricopeptide repeat protein 0.842 506 691
AF-A0A4U8YQ37-F1-model_v4 Tetratricopeptide repeat 0.7611 422 689
AF-A0A348NTG4-F1-model_v4 Uncharacterized protein 0.7202 382 688
AF-A0A1Y6BB13-F1-model_v4 Cro/C1-type HTH DNA-binding domain-containing protein 0.7164 422 775 GO:0003677

Map