F332590

General Info

Members Datasets Scaffolds Average Seq Length
220 154 216 348

Family's Representative Sequence

Representative Sequence 3300046512|Ga0495610_0050647|Ga0495610_0050647_594_1805
Length 390
Sequence MVGGCSTFESTPVFLAGWFLDETRSADHSRKTYDSLGWLRISARKTQMLNWMLVFVPIAIALEYVAAELHLLIFLMAALAIVPLAGWLGRATEQLAERSGEGVGGLLNATFGNATELIIGLSALRAGLHDVVKASIVGSIVGNILLVLGLAMLAGGLRHREQQYNISGARSQATLLTLATIALILPAAYNAVITPRNPQGLQSLSLYISLILTHKSLFSGTASSEQSPDQPPPWSTGKAMSVLGVATVLIAWISEILVGAIEPSARQLGLSNLFVGVFVLSILGNAAEHASAVTAAMKNRMDLALSIAIGSSVQVALLVAPILVLASLFIGPLPMGLAFSGGLVLSVLLAVLITGQIAGDGRSDWLKGVQLLAVYLILGLAFFFTPDAPT

Samples

Sample ID Description Type Environment
1 2511231008 Pseudomonas sp. GM21 Isolate Nodule
2 2511231019 Pseudomonas sp. GM67 Isolate Nodule
3 2738543020 Pseudomonas sp. GV054 Isolate Unclassified
4 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
45 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
46 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
70 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
71 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
80 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
81 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
82 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
83 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
84 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
85 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
86 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
87 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
90 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
96 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
101 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
106 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
110 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
113 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
123 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
124 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
132 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
148 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.18
Metatranscriptomes 0
Isolates 1.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.73
Nodule 0.91
Rhizoplane 1.36
Rhizosphere 94.09
Stem 0
Stem Tuber 0
Unclassified 0.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10001619 3300005288 Bacteria 24529
2 Ga0065714_10004740 3300005288 Bacteria 4514
3 Ga0065714_10065222 3300005288 Bacteria 11752
4 Ga0065714_10066354 3300005288 Bacteria 7024
5 Ga0070690_100100051 3300005330 Bacteria 1921
6 Ga0070670_100034759 3300005331 Plasmid 4338
7 Ga0070689_100081147 3300005340 Unclassified 2546
8 Ga0070674_100260473 3300005356 Bacteria 1366
9 Ga0070673_100004463 3300005364 Bacteria 8848
10 Ga0070667_100237868 3300005367 Bacteria 1625
11 Ga0070714_100268372 3300005435 Bacteria 1582
12 Ga0070710_10095715 3300005437 Bacteria 1759
13 Ga0070711_100138905 3300005439 Bacteria 1819
14 Ga0070663_100079236 3300005455 Bacteria 2410
15 Ga0070681_10013912 3300005458 Bacteria 8007
16 Ga0068867_100036336 3300005459 Bacteria 3575
17 Ga0070685_10152354 3300005466 Unclassified 1466
18 Ga0070695_100053449 3300005545 Bacteria 2598
19 Ga0070665_100004094 3300005548 Bacteria 15332
20 Ga0070665_100097675 3300005548 Unclassified 2941
21 Ga0068855_100182865 3300005563 Unclassified 2369
22 Ga0068857_100033460 3300005577 Bacteria 4546
23 Ga0068866_10071162 3300005718 Bacteria 1839
24 Ga0068860_100006084 3300005843 Bacteria 12143
25 Ga0068860_100223241 3300005843 Bacteria 1830
26 Ga0068862_100100805 3300005844 Bacteria 2525
27 Ga0081455_10001015 3300005937 Bacteria 35513
28 Ga0081455_10013896 3300005937 Bacteria 7914
29 Ga0081455_10119041 3300005937 Bacteria 2083
30 Ga0081455_10142712 3300005937 Unclassified 1857
31 Ga0081538_10001341 3300005981 Bacteria 25310
32 Ga0081538_10002866 3300005981 Bacteria 16483
33 Ga0081538_10028086 3300005981 Bacteria 3881
34 Ga0081538_10031678 3300005981 Bacteria 3560
35 Ga0081538_10111044 3300005981 Unclassified 1346
36 Ga0081539_10033373 3300005985 Bacteria 3136
37 Ga0075365_10022751 3300006038 Bacteria 3931
38 Ga0075365_10048420 3300006038 Bacteria 2798
39 Ga0075432_10009714 3300006058 Bacteria 3274
40 Ga0070712_100059811 3300006175 Bacteria 2684
41 Ga0070712_100251679 3300006175 Bacteria 1412
42 Ga0075362_10005616 3300006177 Bacteria 4604
43 Ga0075367_10139663 3300006178 Bacteria 1501
44 Ga0097621_100185799 3300006237 Bacteria 1798
45 Ga0111539_10001011 3300009094 Bacteria 36852
46 Ga0105241_10003549 3300009174 Bacteria 11604
47 Ga0105248_10018526 3300009177 Bacteria 7696
48 Ga0157370_10025997 3300013104 Bacteria 5785
49 Ga0157378_10155771 3300013297 Bacteria 2133
50 Ga0163162_10164793 3300013306 Bacteria 2340
51 Ga0157380_10251055 3300014326 Bacteria 1601
52 Ga0157379_10066016 3300014968 Bacteria 3235
53 Ga0157379_10282165 3300014968 Bacteria 1512
54 Ga0163161_10016850 3300017792 Bacteria 5107
55 Ga0163161_10018533 3300017792 Bacteria 4877
56 Ga0224572_1004620 3300024225 Bacteria 2409
57 Ga0228598_1006240 3300024227 Bacteria 2469
58 Ga0207642_10100215 3300025899 Bacteria 1452
59 Ga0207645_10094553 3300025907 Bacteria 1924
60 Ga0207707_10053173 3300025912 Bacteria 3525
61 Ga0207693_10019794 3300025915 Bacteria 5351
62 Ga0207650_10023908 3300025925 Plasmid 4338
63 Ga0207664_10046460 3300025929 Bacteria 3408
64 Ga0207670_10099066 3300025936 Unclassified 2078
65 Ga0207669_10162286 3300025937 Bacteria 1580
66 Ga0207711_10055946 3300025941 Bacteria 3388
67 Ga0207689_10004052 3300025942 Bacteria 13313
68 Ga0207658_10088104 3300025986 Bacteria 2399
69 Ga0207677_10121445 3300026023 Bacteria 1966
70 Ga0207703_10197315 3300026035 Bacteria 1786
71 Ga0207678_10083695 3300026067 Bacteria 2729
72 Ga0207674_10043547 3300026116 Bacteria 4628
73 Ga0207674_10067123 3300026116 Bacteria 3612
74 Ga0207698_10341911 3300026142 Unclassified 1410
75 Ga0207428_10000016 3300027907 Bacteria 327690
76 Ga0207428_10112133 3300027907 Bacteria 2098
77 Ga0268266_10002479 3300028379 Bacteria 19727
78 Ga0307410_10029684 3300031852 Bacteria 3485
79 Ga0307407_10015791 3300031903 Bacteria 3744
80 Ga0307409_100008153 3300031995 Bacteria 6331
81 Ga0307416_100202269 3300032002 Bacteria 1886
82 Ga0307411_10003750 3300032005 Bacteria 7128
83 Ga0307411_10010786 3300032005 Bacteria 4892
84 Ga0373956_0070843 3300035119 Bacteria 1591
85 Ga0373943_0047399 3300035170 Bacteria 2101
86 Ga0373935_0017815 3300035692 Bacteria 4315
87 Ga0373935_0057757 3300035692 Bacteria 2476
88 Ga0373927_0028267 3300035695 Bacteria 3658
89 Ga0373927_0182853 3300035695 Bacteria 1375
90 Ga0373933_0013048 3300035724 Bacteria 4600
91 Ga0373947_0075590 3300035725 Bacteria 2074
92 Ga0373947_0159587 3300035725 Bacteria 1458
93 Ga0373947_0164075 3300035725 Unclassified 1438
94 Ga0373947_0201796 3300035725 Bacteria 1301
95 Ga0373937_0021087 3300036401 Bacteria 5848
96 Ga0373937_0022898 3300036401 Bacteria 5618
97 Ga0373937_0045469 3300036401 Bacteria 4012
98 Ga0373937_0066070 3300036401 Bacteria 3330
99 Ga0373937_0117891 3300036401 Bacteria 2473
100 Ga0373925_0018743 3300037068 Bacteria 5030
101 Ga0373925_0024654 3300037068 Bacteria 4392
102 Ga0373925_0047221 3300037068 Bacteria 3205
103 Ga0395900_0015904 3300037418 Bacteria 7664
104 Ga0395900_0125993 3300037418 Bacteria 2627
105 Ga0395898_0104864 3300037466 Bacteria 2711
106 Ga0436362_0333049 3300039453 Bacteria 1867
107 Ga0439437_003323 3300042000 Bacteria 1734
108 Ga0439456_000892 3300042013 Bacteria 5983
109 Ga0450911_000111 3300042115 Bacteria 33827
110 Ga0439446_0004448 3300042156 Bacteria 3554
111 Ga0439459_0001829 3300042438 Bacteria 3206
112 Ga0450916_000650 3300042530 Bacteria 3142
113 Ga0495617_031200 3300046452 Bacteria 1790
114 Ga0495627_001229 3300046453 Bacteria 15957
115 Ga0495592_0080580 3300046454 Unclassified 2355
116 Ga0495592_0215208 3300046454 Bacteria 1288
117 Ga0495590_0018342 3300046457 Bacteria 2506
118 Ga0495591_007772 3300046458 Bacteria 4492
119 Ga0495591_043395 3300046458 Bacteria 1265
120 Ga0495629_0006584 3300046459 Bacteria 8604
121 Ga0495653_0059868 3300046463 Bacteria 2887
122 Ga0495650_0015381 3300046471 Bacteria 3926
123 Ga0495605_0011272 3300046474 Bacteria 4992
124 Ga0495605_0029815 3300046474 Bacteria 2803
125 Ga0495639_0019291 3300046475 Bacteria 2975
126 Ga0495662_0153841 3300046476 Unclassified 1133
127 Ga0495584_0018904 3300046491 Bacteria 3500
128 Ga0495585_0102228 3300046492 Bacteria 1532
129 Ga0495594_0008197 3300046499 Bacteria 5377
130 Ga0495594_0055515 3300046499 Bacteria 2184
131 Ga0495596_0003598 3300046500 Bacteria 7790
132 Ga0495607_0016263 3300046501 Bacteria 4803
133 Ga0495606_0001196 3300046507 Bacteria 36498
134 Ga0495610_0011657 3300046512 Bacteria 5352
135 Ga0495610_0020586 3300046512 Bacteria 3660
136 Ga0495610_0050647 3300046512 Bacteria 2026
137 Ga0495610_0124465 3300046512 Bacteria 1126
138 Ga0495616_0013038 3300046513 Bacteria 4700
139 Ga0495620_0001087 3300046515 Bacteria 16591
140 Ga0495637_0045968 3300046520 Bacteria 1848
141 Ga0495643_0001413 3300046522 Bacteria 22262
142 Ga0495643_0042551 3300046522 Bacteria 2475
143 Ga0495648_0044709 3300046524 Bacteria 2762
144 Ga0495666_0007067 3300046526 Bacteria 5642
145 Ga0495654_0000838 3300046530 Bacteria 23320
146 Ga0495654_0014023 3300046530 Bacteria 4274
147 Ga0495654_0078788 3300046530 Bacteria 1548
148 Ga0495609_0007171 3300046538 Bacteria 5596
149 Ga0495622_0027844 3300046557 Bacteria 2637
150 Ga0495622_0037970 3300046557 Bacteria 2242
151 Ga0495667_0038338 3300046559 Bacteria 3191
152 Ga0495667_0045318 3300046559 Bacteria 2912
153 Ga0495634_0176531 3300046642 Bacteria 1340
154 Ga0495634_0238984 3300046642 Bacteria 1115
155 Ga0495625_0002515 3300046660 Bacteria 19738
156 Ga0495625_0009707 3300046660 Bacteria 8011
157 Ga0495635_0033668 3300046663 Bacteria 3554
158 Ga0495661_0075133 3300046665 Bacteria 1964
159 Ga0495657_0209257 3300046675 Bacteria 1186
160 Ga0495599_0061851 3300046678 Bacteria 2339
161 Ga0495646_0184833 3300046680 Unclassified 1142
162 Ga0495624_0065798 3300046690 Unclassified 2264
163 Ga0495670_0002568 3300046691 Bacteria 8980
164 Ga0495670_0033195 3300046691 Bacteria 2568
165 Ga0495671_0010606 3300046692 Bacteria 5095
166 Ga0495671_0018758 3300046692 Bacteria 3667
167 Ga0495589_0027643 3300046794 Bacteria 2868
168 Ga0495600_0036347 3300046809 Bacteria 3201
169 Ga0495660_0023551 3300046810 Bacteria 3511
170 Ga0495660_0070039 3300046810 Bacteria 1863
171 Ga0495660_0085167 3300046810 Bacteria 1651
172 Ga0495604_0006968 3300047317 Bacteria 8960
173 Ga0495674_0049425 3300047319 Bacteria 3717
174 Ga0495674_0069069 3300047319 Bacteria 3056
175 Ga0495674_0090953 3300047319 Bacteria 2607
176 Ga0495676_0100166 3300047321 Bacteria 2145
177 Ga0495680_0022856 3300047322 Bacteria 5207
178 Ga0495680_0056100 3300047322 Bacteria 3051
179 Ga0495680_0125946 3300047322 Unclassified 1887
180 Ga0495683_0029124 3300047323 Bacteria 2822
181 Ga0495683_0090318 3300047323 Bacteria 1485
182 Ga0495675_0047416 3300047444 Bacteria 2733
183 Ga0495675_0098641 3300047444 Bacteria 1830
184 Ga0495673_0000786 3300047469 Bacteria 29910
185 Ga0495673_0000807 3300047469 Bacteria 29386
186 Ga0495681_0002058 3300047470 Bacteria 14625
187 Ga0495681_0009944 3300047470 Bacteria 5802
188 Ga0495681_0013803 3300047470 Bacteria 4670
189 Ga0495681_0069828 3300047470 Bacteria 1595
190 Ga0495684_0014304 3300047471 Bacteria 6108
191 Ga0495684_0095729 3300047471 Bacteria 2247
192 Ga0495602_0070780 3300048088 Bacteria 2982
193 Ga0495626_0000049 3300048091 Bacteria 161052
194 Ga0495626_0000464 3300048091 Bacteria 41332
195 Ga0496100_0107882 3300048903 Bacteria 1930
196 Ga0496102_0029187 3300048905 Bacteria 4934
197 Ga0496104_0019764 3300048907 Bacteria 6167
198 Ga0495678_001511 3300049459 Bacteria 18063
199 Ga0501031_0109499 3300049568 Bacteria 1804
200 Ga0501034_0003354 3300049571 Bacteria 18275
201 Ga0501034_0036830 3300049571 Bacteria 4954
202 Ga0501034_0118783 3300049571 Bacteria 2631
203 Ga0501047_0252155 3300049581 Bacteria 1613
204 Ga0501048_0003663 3300049582 Bacteria 11708
205 Ga0501048_0392297 3300049582 Bacteria 992
206 Ga0501075_0193616 3300049591 Bacteria 1551
207 Ga0501226_000005 3300049853 Bacteria 271019
208 nmdc:mga0yw44_22409_c2 3300050492 Bacteria 1751
209 nmdc:mga08y16_26_c1 3300050511 Bacteria 223965
210 nmdc:mga08y16_349477_c1 3300050511 Bacteria 1519
211 Ga0495601_0059057 3300053077 Bacteria 2431
212 Ga0495595_0083095 3300053084 Bacteria 1528
213 Ga0495619_0011425 3300053085 Bacteria 5593
214 Ga0495619_0128545 3300053085 Unclassified 1740
215 Ga0500609_001852 3300053731 Bacteria 3066
216 Ga0530510_0242779 3300061734 Bacteria 1341

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046458 Ga0495591_043395 Ga0495591_043395_12_962 295
2 3300014968 Ga0157379_10282165 Ga0157379_102821652 297
3 3300024227 Ga0228598_1006240 Ga0228598_10062401 304
4 3300046476 Ga0495662_0153841 Ga0495662_0153841_38_976 304
5 3300046559 Ga0495667_0038338 Ga0495667_0038338_2177_3118 304
6 3300046675 Ga0495657_0209257 Ga0495657_0209257_32_973 304
7 3300046680 Ga0495646_0184833 Ga0495646_0184833_34_972 304
8 3300049582 Ga0501048_0392297 Ga0501048_0392297_25_969 305
9 3300061734 Ga0530510_0242779 Ga0530510_0242779_51_995 305
10 3300005288 Ga0065714_10066354 Ga0065714_100663542 322
11 3300046512 Ga0495610_0124465 Ga0495610_0124465_34_1107 322
12 3300047470 Ga0495681_0069828 Ga0495681_0069828_131_1216 322
13 3300005288 Ga0065714_10065222 Ga0065714_1006522212 325
14 3300046526 Ga0495666_0007067 Ga0495666_0007067_163_1248 326
15 3300005937 Ga0081455_10142712 Ga0081455_101427122 327
16 3300039453 Ga0436362_0333049 Ga0436362_0333049_425_1438 327
17 3300049571 Ga0501034_0118783 Ga0501034_0118783_201_1265 327
18 3300009094 Ga0111539_10001011 Ga0111539_1000101124 328
19 3300027907 Ga0207428_10000016 Ga0207428_10000016131 328
20 3300050511 nmdc:mga08y16_26_c1 nmdc:mga08y16_26_c1_78092_79153 328
21 3300006175 Ga0070712_100251679 Ga0070712_1002516791 329
22 3300048903 Ga0496100_0107882 Ga0496100_0107882_868_1917 329
23 3300036401 Ga0373937_0021087 Ga0373937_0021087_3811_4884 330
24 3300037418 Ga0395900_0125993 Ga0395900_0125993_1528_2583 330
25 3300005981 Ga0081538_10001341 Ga0081538_1000134122 331
26 3300046452 Ga0495617_031200 Ga0495617_031200_667_1725 331
27 3300046474 Ga0495605_0011272 Ga0495605_0011272_3290_4348 331
28 3300046501 Ga0495607_0016263 Ga0495607_0016263_303_1361 331
29 3300046507 Ga0495606_0001196 Ga0495606_0001196_24845_25903 331
30 3300046512 Ga0495610_0011657 Ga0495610_0011657_3624_4682 331
31 3300046515 Ga0495620_0001087 Ga0495620_0001087_10939_11997 331
32 3300046520 Ga0495637_0045968 Ga0495637_0045968_671_1729 331
33 3300046522 Ga0495643_0042551 Ga0495643_0042551_749_1807 331
34 3300046691 Ga0495670_0033195 Ga0495670_0033195_1406_2464 331
35 3300046810 Ga0495660_0085167 Ga0495660_0085167_544_1602 331
36 3300047469 Ga0495673_0000786 Ga0495673_0000786_22988_24046 331
37 3300048091 Ga0495626_0000464 Ga0495626_0000464_15276_16334 331
38 3300048905 Ga0496102_0029187 Ga0496102_0029187_23_1069 331
39 3300048907 Ga0496104_0019764 Ga0496104_0019764_3882_4928 331
40 3300049459 Ga0495678_001511 Ga0495678_001511_15791_16849 331
41 3300049571 Ga0501034_0003354 Ga0501034_0003354_3975_5039 331
42 3300005981 Ga0081538_10028086 Ga0081538_100280865 332
43 3300005548 Ga0070665_100004094 Ga0070665_10000409418 334
44 3300026116 Ga0207674_10067123 Ga0207674_100671233 334
45 3300028379 Ga0268266_10002479 Ga0268266_100024797 334
46 3300046512 Ga0495610_0050647 Ga0495610_0050647_594_1805 334
47 3300005288 Ga0065714_10004740 Ga0065714_100047404 335
48 3300005356 Ga0070674_100260473 Ga0070674_1002604731 335
49 3300005367 Ga0070667_100237868 Ga0070667_1002378682 335
50 3300005458 Ga0070681_10013912 Ga0070681_100139124 335
51 3300005459 Ga0068867_100036336 Ga0068867_1000363361 335
52 3300005545 Ga0070695_100053449 Ga0070695_1000534492 335
53 3300005563 Ga0068855_100182865 Ga0068855_1001828652 335
54 3300005577 Ga0068857_100033460 Ga0068857_1000334604 335
55 3300005718 Ga0068866_10071162 Ga0068866_100711622 335
56 3300005843 Ga0068860_100223241 Ga0068860_1002232412 335
57 3300005844 Ga0068862_100100805 Ga0068862_1001008052 335
58 3300005985 Ga0081539_10033373 Ga0081539_100333732 335
59 3300006237 Ga0097621_100185799 Ga0097621_1001857992 335
60 3300009174 Ga0105241_10003549 Ga0105241_100035492 335
61 3300009177 Ga0105248_10018526 Ga0105248_100185265 335
62 3300013297 Ga0157378_10155771 Ga0157378_101557711 335
63 3300014968 Ga0157379_10066016 Ga0157379_100660162 335
64 3300025899 Ga0207642_10100215 Ga0207642_101002152 335
65 3300025912 Ga0207707_10053173 Ga0207707_100531732 335
66 3300025937 Ga0207669_10162286 Ga0207669_101622862 335
67 3300025941 Ga0207711_10055946 Ga0207711_100559461 335
68 3300025942 Ga0207689_10004052 Ga0207689_100040527 335
69 3300025986 Ga0207658_10088104 Ga0207658_100881042 335
70 3300026023 Ga0207677_10121445 Ga0207677_101214451 335
71 3300026035 Ga0207703_10197315 Ga0207703_101973151 335
72 3300026116 Ga0207674_10043547 Ga0207674_100435473 335
73 3300026142 Ga0207698_10341911 Ga0207698_103419111 335
74 3300035119 Ga0373956_0070843 Ga0373956_0070843_128_1207 335
75 3300036401 Ga0373937_0066070 Ga0373937_0066070_2020_3093 335
76 3300046453 Ga0495627_001229 Ga0495627_001229_9515_10588 335
77 3300046457 Ga0495590_0018342 Ga0495590_0018342_1159_2232 335
78 3300046458 Ga0495591_007772 Ga0495591_007772_2516_3586 335
79 3300046471 Ga0495650_0015381 Ga0495650_0015381_1494_2567 335
80 3300046474 Ga0495605_0029815 Ga0495605_0029815_1379_2452 335
81 3300046492 Ga0495585_0102228 Ga0495585_0102228_302_1372 335
82 3300046500 Ga0495596_0003598 Ga0495596_0003598_478_1551 335
83 3300046513 Ga0495616_0013038 Ga0495616_0013038_2167_3240 335
84 3300046522 Ga0495643_0001413 Ga0495643_0001413_19357_20430 335
85 3300046524 Ga0495648_0044709 Ga0495648_0044709_1128_2201 335
86 3300046530 Ga0495654_0000838 Ga0495654_0000838_22197_23267 335
87 3300046530 Ga0495654_0014023 Ga0495654_0014023_1387_2460 335
88 3300046559 Ga0495667_0045318 Ga0495667_0045318_1265_2338 335
89 3300046642 Ga0495634_0238984 Ga0495634_0238984_13_1050 335
90 3300046660 Ga0495625_0002515 Ga0495625_0002515_1659_2732 335
91 3300046663 Ga0495635_0033668 Ga0495635_0033668_1331_2410 335
92 3300046665 Ga0495661_0075133 Ga0495661_0075133_335_1408 335
93 3300046794 Ga0495589_0027643 Ga0495589_0027643_637_1710 335
94 3300046810 Ga0495660_0023551 Ga0495660_0023551_1862_2935 335
95 3300047322 Ga0495680_0022856 Ga0495680_0022856_3561_4634 335
96 3300047323 Ga0495683_0029124 Ga0495683_0029124_862_1935 335
97 3300047469 Ga0495673_0000807 Ga0495673_0000807_10573_11646 335
98 3300047470 Ga0495681_0009944 Ga0495681_0009944_1518_2591 335
99 3300048091 Ga0495626_0000049 Ga0495626_0000049_124247_125320 335
100 3300053077 Ga0495601_0059057 Ga0495601_0059057_414_1487 335
101 3300053085 Ga0495619_0011425 Ga0495619_0011425_442_1515 335
102 3300035170 Ga0373943_0047399 Ga0373943_0047399_998_2059 337
103 3300035692 Ga0373935_0017815 Ga0373935_0017815_1666_2727 337
104 3300035725 Ga0373947_0075590 Ga0373947_0075590_702_1763 337
105 3300036401 Ga0373937_0117891 Ga0373937_0117891_43_1104 337
106 3300037068 Ga0373925_0018743 Ga0373925_0018743_2555_3616 337
107 3300037068 Ga0373925_0047221 Ga0373925_0047221_1582_2655 337
108 3300046459 Ga0495629_0006584 Ga0495629_0006584_6196_7257 337
109 3300046499 Ga0495594_0055515 Ga0495594_0055515_182_1243 337
110 3300046690 Ga0495624_0065798 Ga0495624_0065798_50_1105 337
111 3300047319 Ga0495674_0090953 Ga0495674_0090953_668_1741 337
112 3300047321 Ga0495676_0100166 Ga0495676_0100166_391_1452 337
113 3300053085 Ga0495619_0128545 Ga0495619_0128545_50_1111 337
114 3300053731 Ga0500609_001852 Ga0500609_001852_1915_2973 337
115 3300005981 Ga0081538_10002866 Ga0081538_100028664 338
116 3300035695 Ga0373927_0028267 Ga0373927_0028267_2516_3589 338
117 3300035725 Ga0373947_0201796 Ga0373947_0201796_32_1105 338
118 3300046642 Ga0495634_0176531 Ga0495634_0176531_148_1221 338
119 3300005331 Ga0070670_100034759 Ga0070670_1000347592 341
120 3300005340 Ga0070689_100081147 Ga0070689_1000811472 341
121 3300005364 Ga0070673_100004463 Ga0070673_1000044636 341
122 3300005466 Ga0070685_10152354 Ga0070685_101523541 341
123 3300025907 Ga0207645_10094553 Ga0207645_100945531 341
124 3300025925 Ga0207650_10023908 Ga0207650_100239084 341
125 3300025936 Ga0207670_10099066 Ga0207670_100990661 341
126 3300037418 Ga0395900_0015904 Ga0395900_0015904_6192_7253 342
127 3300037466 Ga0395898_0104864 Ga0395898_0104864_1499_2560 342
128 3300005437 Ga0070710_10095715 Ga0070710_100957152 343
129 3300005937 Ga0081455_10001015 Ga0081455_100010158 343
130 3300005937 Ga0081455_10119041 Ga0081455_101190411 343
131 3300006175 Ga0070712_100059811 Ga0070712_1000598112 343
132 3300025915 Ga0207693_10019794 Ga0207693_100197944 343
133 3300035692 Ga0373935_0057757 Ga0373935_0057757_209_1267 343
134 3300035695 Ga0373927_0182853 Ga0373927_0182853_133_1191 343
135 3300035724 Ga0373933_0013048 Ga0373933_0013048_3317_4375 343
136 3300035725 Ga0373947_0159587 Ga0373947_0159587_330_1388 343
137 3300037068 Ga0373925_0024654 Ga0373925_0024654_1117_2175 343
138 3300046454 Ga0495592_0215208 Ga0495592_0215208_121_1179 343
139 3300046678 Ga0495599_0061851 Ga0495599_0061851_1190_2248 343
140 3300047319 Ga0495674_0069069 Ga0495674_0069069_1864_2922 343
141 3300047322 Ga0495680_0056100 Ga0495680_0056100_1729_2787 343
142 3300047471 Ga0495684_0095729 Ga0495684_0095729_170_1228 343
143 3300049571 Ga0501034_0036830 Ga0501034_0036830_3403_4464 343
144 3300049581 Ga0501047_0252155 Ga0501047_0252155_512_1573 343
145 iso_pu_bacteria 2511231008 2511279639 343
146 3300005455 Ga0070663_100079236 Ga0070663_1000792364 344
147 3300024225 Ga0224572_1004620 Ga0224572_10046202 344
148 3300026067 Ga0207678_10083695 Ga0207678_100836952 344
149 3300035725 Ga0373947_0164075 Ga0373947_0164075_323_1381 344
150 3300036401 Ga0373937_0022898 Ga0373937_0022898_1046_2104 344
151 3300046454 Ga0495592_0080580 Ga0495592_0080580_373_1431 344
152 3300047319 Ga0495674_0049425 Ga0495674_0049425_1038_2102 344
153 3300047322 Ga0495680_0125946 Ga0495680_0125946_107_1165 344
154 3300047444 Ga0495675_0098641 Ga0495675_0098641_616_1674 344
155 3300048088 Ga0495602_0070780 Ga0495602_0070780_282_1340 344
156 3300049582 Ga0501048_0003663 Ga0501048_0003663_7683_8744 344
157 3300053084 Ga0495595_0083095 Ga0495595_0083095_51_1109 344
158 iso_pu_bacteria 2511231019 2511344123 344
159 iso_pu_bacteria 2738543020 2739289063 344
160 iso_pu_bacteria 2738543021 2739294375 344
161 3300005548 Ga0070665_100097675 Ga0070665_1000976753 345
162 3300005981 Ga0081538_10031678 Ga0081538_100316783 345
163 3300036401 Ga0373937_0045469 Ga0373937_0045469_1480_2544 345
164 3300042000 Ga0439437_003323 Ga0439437_003323_545_1609 345
165 3300042013 Ga0439456_000892 Ga0439456_000892_1154_2218 345
166 3300042115 Ga0450911_000111 Ga0450911_000111_12452_13516 345
167 3300042156 Ga0439446_0004448 Ga0439446_0004448_2070_3134 345
168 3300042438 Ga0439459_0001829 Ga0439459_0001829_719_1783 345
169 3300049568 Ga0501031_0109499 Ga0501031_0109499_140_1210 345
170 3300049591 Ga0501075_0193616 Ga0501075_0193616_311_1381 345
171 3300005330 Ga0070690_100100051 Ga0070690_1001000511 346
172 3300005843 Ga0068860_100006084 Ga0068860_10000608413 346
173 3300005937 Ga0081455_10013896 Ga0081455_100138964 346
174 3300006038 Ga0075365_10022751 Ga0075365_100227512 346
175 3300006038 Ga0075365_10048420 Ga0075365_100484202 346
176 3300006177 Ga0075362_10005616 Ga0075362_100056163 346
177 3300006178 Ga0075367_10139663 Ga0075367_101396632 346
178 3300014326 Ga0157380_10251055 Ga0157380_102510552 346
179 3300050492 nmdc:mga0yw44_22409_c2 nmdc:mga0yw44_22409_c2_93_1157 346
180 3300050511 nmdc:mga08y16_349477_c1 nmdc:mga08y16_349477_c1_34_1134 346
181 3300005435 Ga0070714_100268372 Ga0070714_1002683721 347
182 3300005439 Ga0070711_100138905 Ga0070711_1001389052 347
183 3300006058 Ga0075432_10009714 Ga0075432_100097143 347
184 3300017792 Ga0163161_10016850 Ga0163161_100168505 347
185 3300025929 Ga0207664_10046460 Ga0207664_100464603 347
186 3300027907 Ga0207428_10112133 Ga0207428_101121332 347
187 3300042530 Ga0450916_000650 Ga0450916_000650_220_1293 347
188 3300046491 Ga0495584_0018904 Ga0495584_0018904_1094_2164 347
189 3300046512 Ga0495610_0020586 Ga0495610_0020586_1857_2927 347
190 3300046557 Ga0495622_0027844 Ga0495622_0027844_1288_2358 347
191 3300046692 Ga0495671_0018758 Ga0495671_0018758_663_1733 347
192 3300047470 Ga0495681_0002058 Ga0495681_0002058_2492_3562 347
193 3300047470 Ga0495681_0013803 Ga0495681_0013803_183_1253 347
194 3300049853 Ga0501226_000005 Ga0501226_000005_100255_101328 347
195 3300013104 Ga0157370_10025997 Ga0157370_100259978 348
196 3300013306 Ga0163162_10164793 Ga0163162_101647931 348
197 3300017792 Ga0163161_10018533 Ga0163161_100185335 348
198 3300031852 Ga0307410_10029684 Ga0307410_100296844 348
199 3300031903 Ga0307407_10015791 Ga0307407_100157912 348
200 3300031995 Ga0307409_100008153 Ga0307409_1000081537 348
201 3300032002 Ga0307416_100202269 Ga0307416_1002022692 348
202 3300032005 Ga0307411_10003750 Ga0307411_100037504 348
203 3300032005 Ga0307411_10010786 Ga0307411_100107863 348
204 3300046475 Ga0495639_0019291 Ga0495639_0019291_1549_2622 348
205 3300046499 Ga0495594_0008197 Ga0495594_0008197_1946_3019 348
206 3300046530 Ga0495654_0078788 Ga0495654_0078788_169_1242 348
207 3300046538 Ga0495609_0007171 Ga0495609_0007171_2605_3678 348
208 3300046557 Ga0495622_0037970 Ga0495622_0037970_519_1592 348
209 3300046660 Ga0495625_0009707 Ga0495625_0009707_4692_5765 348
210 3300046691 Ga0495670_0002568 Ga0495670_0002568_5331_6404 348
211 3300046692 Ga0495671_0010606 Ga0495671_0010606_3651_4724 348
212 3300046810 Ga0495660_0070039 Ga0495660_0070039_300_1373 348
213 3300047323 Ga0495683_0090318 Ga0495683_0090318_99_1172 348
214 3300005981 Ga0081538_10111044 Ga0081538_101110442 350
215 3300005288 Ga0065714_10001619 Ga0065714_100016191 351
216 3300046463 Ga0495653_0059868 Ga0495653_0059868_1507_2577 351
217 3300046809 Ga0495600_0036347 Ga0495600_0036347_450_1520 351
218 3300047317 Ga0495604_0006968 Ga0495604_0006968_2712_3782 351
219 3300047444 Ga0495675_0047416 Ga0495675_0047416_1507_2577 351
220 3300047471 Ga0495684_0014304 Ga0495684_0014304_3857_4927 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01699

Na_Ca_ex

Sodium/calcium exchanger protein

238

384

0.88

PF01699

Na_Ca_ex

Sodium/calcium exchanger protein

69

214

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kjs-assembly1.cif.gz_A structure of native yfke 0.9318 1 345
4kjs-assembly1.cif.gz_A structure of native yfke 0.929 1 345
4kjr-assembly2.cif.gz_B crystal structure of selenium substituted ca2+/h+ antiporter proteinyfke 0.9185 5 345
4k1c-assembly2.cif.gz_B vcx1 calcium/proton exchanger 0.917 2 344
4k1c-assembly1.cif.gz_A vcx1 calcium/proton exchanger 0.9147 3 344
ID Description Score Start End Superfamily
af_C6KSN3_150_437_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.9279 57 342 1.20.1420.30
af_C6KSN3_150_437_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.9186 57 342 1.20.1420.30
af_O59768_113_408_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9178 55 342 3.30.360.10
af_Q769E5_118_423_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.9102 56 342 1.20.1420.30
af_P42839_561_901_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.8937 57 342 3.30.40.10
ID Description Score Start End GO Terms
AF-A0A538CS44-F1-model_v4 Ca(2+)/H(+) antiporter 0.9671 2 344 GO:0006874
GO:0012505
GO:0015369
GO:0016020
AF-A0A2D6SWT7-F1-model_v4 Ca(2+)/H(+) antiporter 0.9653 1 345 GO:0006874
GO:0012505
GO:0015369
GO:0016020
AF-A0A6N6ZHM3-F1-model_v4 deleted 0.964 4 345
AF-A0A1U7CQZ8-F1-model_v4 Ca(2+)/H(+) antiporter 0.9633 1 348 GO:0006874
GO:0012505
GO:0015369
GO:0016020
AF-A0A2W4RHD0-F1-model_v4 Ca(2+)/H(+) antiporter 0.9629 4 345 GO:0006874
GO:0012505
GO:0015369
GO:0016020

Feature Viewer

pLDDT pTM Quality
86.81 0.87 High
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Predicted Structure (AlphaFold2)

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