F328000

General Info

Members Datasets Scaffolds Average Seq Length
216 142 216 444

Family's Representative Sequence

Representative Sequence 3300048905|Ga0496102_0086218|Ga0496102_0086218_385_1860
Length 484
Sequence MPTERSRPPSVERLLAAARPLVAEGTDRAALTSVARDVVADERSRLAGDHREREAERKGKTESEGAVVGQVGRSVEALAREVADRLDAFADPPAAGTGLTQVINATGVILHTNLGRAPWARAAIEAATRAAGGYSLLEFDRDAGRRGPRFRAAEEHLIALTGAQDALVTVNNAAALALAVGLAGRRELVEIGGGVRIPEIVRRTGARLIEVGTTNRTRASDFEAPLVEGRASVVLRVHPSNFAQTGFVEAPDPIELARLSHTHGAILVDDVGSGALLETAAFGLAHEPTPAERLVAGADLVTFSGDKLVGGPQAGLIVGPADLIGRIRRDPLARAVRPDKVTLAALSATLGLYRAGRATTEIPVWQMIAATIESLGRRADAVFEALPAEARSRIVVSETMSAVGGGSLPGEMLESVGLVVAGRGAGALAARLRGGDPVVVGRVEHGAVVLDLRTVDPSDDVALARALVQALAGRAAVGSTGDPT

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
100 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
107 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.04
Rhizosphere 87.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100019650 3300005329 Bacteria 6002
2 Ga0070680_100145834 3300005336 Bacteria 1986
3 Ga0070689_100002540 3300005340 Bacteria 11957
4 Ga0070687_100001169 3300005343 Bacteria 9084
5 Ga0070661_100008893 3300005344 Bacteria 6950
6 Ga0070668_100091533 3300005347 Bacteria 2398
7 Ga0070675_100002119 3300005354 Bacteria 14655
8 Ga0070674_100012453 3300005356 Bacteria 5224
9 Ga0070673_100037121 3300005364 Bacteria 3709
10 Ga0070688_100043036 3300005365 Bacteria 2781
11 Ga0070659_100003736 3300005366 Bacteria 10857
12 Ga0070705_100028796 3300005440 Bacteria 3046
13 Ga0070700_100011330 3300005441 Bacteria 4936
14 Ga0070694_100027185 3300005444 Bacteria 3714
15 Ga0070708_100013039 3300005445 Bacteria 6793
16 Ga0070663_100022799 3300005455 Bacteria 4189
17 Ga0070662_100023015 3300005457 Bacteria 4276
18 Ga0068867_100034599 3300005459 Bacteria 3662
19 Ga0070685_10002555 3300005466 Bacteria 9323
20 Ga0070706_100005356 3300005467 Bacteria 12230
21 Ga0070706_100217485 3300005467 Bacteria 1783
22 Ga0070707_100000667 3300005468 Bacteria 34100
23 Ga0070707_100003926 3300005468 Bacteria 13997
24 Ga0070707_100010776 3300005468 Bacteria 8515
25 Ga0070698_100005263 3300005471 Bacteria 14153
26 Ga0070698_100028368 3300005471 Bacteria 5814
27 Ga0070698_100047053 3300005471 Bacteria 4410
28 Ga0070698_100058020 3300005471 Bacteria 3915
29 Ga0070698_100237338 3300005471 Bacteria 1756
30 Ga0070699_100015027 3300005518 Bacteria 6653
31 Ga0070699_100061619 3300005518 Bacteria 3251
32 Ga0070699_100150984 3300005518 Bacteria 2055
33 Ga0070699_100177849 3300005518 Bacteria 1887
34 Ga0070679_100097469 3300005530 Bacteria 2928
35 Ga0070684_100004630 3300005535 Bacteria 10493
36 Ga0070697_100019147 3300005536 Bacteria 5404
37 Ga0070697_100042813 3300005536 Bacteria 3665
38 Ga0070697_100121647 3300005536 Bacteria 2184
39 Ga0068853_100253538 3300005539 Bacteria 1615
40 Ga0070672_100018837 3300005543 Bacteria 4999
41 Ga0070686_100007578 3300005544 Bacteria 6061
42 Ga0070695_100007899 3300005545 Bacteria 6297
43 Ga0070696_100000498 3300005546 Bacteria 24780
44 Ga0070696_100024426 3300005546 Bacteria 4107
45 Ga0070696_100030870 3300005546 Bacteria 3670
46 Ga0070696_100092337 3300005546 Bacteria 2157
47 Ga0070693_100008406 3300005547 Bacteria 5088
48 Ga0070704_100015936 3300005549 Bacteria 4736
49 Ga0070704_100087579 3300005549 Bacteria 2311
50 Ga0070704_100149081 3300005549 Bacteria 1837
51 Ga0068855_100178092 3300005563 Bacteria 2405
52 Ga0070664_100103891 3300005564 Bacteria 2474
53 Ga0070702_100001598 3300005615 Bacteria 9353
54 Ga0068864_100007182 3300005618 Bacteria 9148
55 Ga0068864_100042039 3300005618 Bacteria 3910
56 Ga0068858_100026987 3300005842 Bacteria 5335
57 Ga0068860_100021621 3300005843 Bacteria 6228
58 Ga0068860_100130978 3300005843 Bacteria 2407
59 Ga0068862_100019428 3300005844 Bacteria 5671
60 Ga0081539_10000994 3300005985 Bacteria 52643
61 Ga0081539_10032449 3300005985 Bacteria 3198
62 Ga0070716_100122039 3300006173 Bacteria 1633
63 Ga0097621_100097384 3300006237 Bacteria 2470
64 Ga0075428_100000274 3300006844 Bacteria 51155
65 Ga0075431_100077198 3300006847 Bacteria 3438
66 Ga0075434_100175051 3300006871 Bacteria 2166
67 Ga0075429_100034909 3300006880 Bacteria 4371
68 Ga0068865_100010924 3300006881 Bacteria 5667
69 Ga0111539_10031003 3300009094 Bacteria 6496
70 Ga0111539_10043337 3300009094 Bacteria 5394
71 Ga0105245_10003819 3300009098 Bacteria 13390
72 Ga0105245_10225632 3300009098 Bacteria 1810
73 Ga0114129_10079110 3300009147 Bacteria 4571
74 Ga0105243_10005811 3300009148 Bacteria 9573
75 Ga0105243_10087166 3300009148 Bacteria 2562
76 Ga0105248_10021891 3300009177 Bacteria 7084
77 Ga0105249_10009218 3300009553 Bacteria 8632
78 Ga0105249_10048444 3300009553 Bacteria 3874
79 Ga0105249_10349757 3300009553 Bacteria 1497
80 Ga0157378_10003427 3300013297 Bacteria 14074
81 Ga0157378_10159064 3300013297 Bacteria 2111
82 Ga0157375_10003061 3300013308 Bacteria 14513
83 Ga0163163_10208020 3300014325 Bacteria 2005
84 Ga0157380_10018871 3300014326 Bacteria 5130
85 Ga0157380_10082224 3300014326 Bacteria 2636
86 Ga0182008_10027263 3300014497 Bacteria 2895
87 Ga0157377_10003598 3300014745 Bacteria 7016
88 Ga0157379_10092216 3300014968 Bacteria 2717
89 Ga0207643_10006803 3300025908 Bacteria 6137
90 Ga0207684_10008087 3300025910 Bacteria 9378
91 Ga0207684_10012043 3300025910 Bacteria 7533
92 Ga0207684_10049199 3300025910 Bacteria 3577
93 Ga0207662_10001113 3300025918 Bacteria 12619
94 Ga0207662_10025432 3300025918 Bacteria 3409
95 Ga0207652_10134230 3300025921 Bacteria 2209
96 Ga0207646_10001518 3300025922 Bacteria 28512
97 Ga0207646_10013218 3300025922 Bacteria 7898
98 Ga0207646_10053348 3300025922 Bacteria 3617
99 Ga0207646_10077081 3300025922 Bacteria 2979
100 Ga0207646_10113894 3300025922 Bacteria 2428
101 Ga0207646_10149239 3300025922 Bacteria 2108
102 Ga0207681_10022953 3300025923 Bacteria 3985
103 Ga0207650_10095384 3300025925 Bacteria 2280
104 Ga0207659_10095910 3300025926 Bacteria 2225
105 Ga0207690_10012966 3300025932 Bacteria 4997
106 Ga0207706_10006643 3300025933 Bacteria 10701
107 Ga0207706_10113508 3300025933 Bacteria 2383
108 Ga0207669_10056598 3300025937 Bacteria 2382
109 Ga0207691_10074749 3300025940 Bacteria 3056
110 Ga0207689_10034175 3300025942 Bacteria 4223
111 Ga0207679_10216756 3300025945 Bacteria 1608
112 Ga0207712_10017977 3300025961 Bacteria 4600
113 Ga0207668_10130836 3300025972 Bacteria 1916
114 Ga0207703_10066435 3300026035 Bacteria 2967
115 Ga0207639_10019220 3300026041 Bacteria 4869
116 Ga0207678_10027322 3300026067 Bacteria 4977
117 Ga0207708_10011599 3300026075 Bacteria 6567
118 Ga0207708_10037131 3300026075 Bacteria 3711
119 Ga0207708_10122946 3300026075 Bacteria 2023
120 Ga0207648_10015276 3300026089 Bacteria 7063
121 Ga0207674_10007329 3300026116 Bacteria 12848
122 Ga0207674_10142509 3300026116 Bacteria 2356
123 Ga0207683_10034383 3300026121 Bacteria 4405
124 Ga0207683_10044364 3300026121 Bacteria 3887
125 Ga0207428_10022842 3300027907 Bacteria 5272
126 Ga0207428_10101319 3300027907 Bacteria 2225
127 Ga0268265_10061747 3300028380 Bacteria 2877
128 Ga0268265_10080432 3300028380 Bacteria 2570
129 Ga0268264_10033681 3300028381 Bacteria 4211
130 Ga0265319_1002472 3300028563 Bacteria 10080
131 Ga0265319_1022299 3300028563 Bacteria 2310
132 Ga0265334_10010385 3300028573 Bacteria 3934
133 Ga0265334_10028373 3300028573 Bacteria 2249
134 Ga0265322_10023087 3300028654 Bacteria 1779
135 Ga0265320_10015114 3300031240 Bacteria 4370
136 Ga0265329_10008185 3300031242 Bacteria 3984
137 Ga0265339_10002034 3300031249 Bacteria 14850
138 Ga0265316_10054400 3300031344 Bacteria 3134
139 Ga0265313_10017745 3300031595 Bacteria 4027
140 Ga0265314_10005664 3300031711 Bacteria 11220
141 Ga0265314_10013395 3300031711 Bacteria 6627
142 Ga0307416_100004363 3300032002 Bacteria 8511
143 Ga0307415_100021146 3300032126 Bacteria 3992
144 Ga0316583_10003685 3300032133 Bacteria 5419
145 Ga0373951_0015115 3300035091 Bacteria 1738
146 Ga0316574_0078103 3300035398 Bacteria 2099
147 Ga0373931_0035810 3300035691 Bacteria 2583
148 Ga0373937_0141928 3300036401 Unclassified 2248
149 Ga0436360_0730041 3300039438 Bacteria 11070
150 Ga0453683_0127465 3300044673 Bacteria 1603
151 Ga0495603_0084964 3300046455 Bacteria 1853
152 Ga0496100_0046431 3300048903 Bacteria 2793
153 Ga0496102_0028235 3300048905 Bacteria 5010
154 Ga0496102_0086218 3300048905 Bacteria 2900
155 Ga0496103_0052594 3300048906 Bacteria 2522
156 Ga0496103_0163961 3300048906 Bacteria 1426
157 Ga0496104_0007257 3300048907 Bacteria 9780
158 Ga0496104_0014378 3300048907 Bacteria 7151
159 Ga0496104_0086142 3300048907 Bacteria 2999
160 Ga0496105_0015492 3300048908 Bacteria 6077
161 Ga0496105_0041434 3300048908 Bacteria 3796
162 Ga0496107_0085530 3300048910 Bacteria 2301
163 Ga0496108_0008678 3300048911 Bacteria 8241
164 Ga0496108_0030028 3300048911 Bacteria 4505
165 Ga0496109_0003986 3300048912 Bacteria 12327
166 Ga0496109_0013219 3300048912 Bacteria 7146
167 Ga0496109_0045937 3300048912 Bacteria 3965
168 Ga0496109_0111861 3300048912 Bacteria 2539
169 Ga0496110_0028343 3300048913 Bacteria 4809
170 Ga0496111_0002640 3300048914 Bacteria 10871
171 Ga0496111_0020449 3300048914 Bacteria 4608
172 Ga0496112_0000001 3300048915 Bacteria 1346031
173 Ga0496112_0001308 3300048915 Bacteria 18920
174 Ga0496112_0016558 3300048915 Bacteria 6911
175 Ga0496112_0147342 3300048915 Bacteria 2322
176 Ga0496112_0211952 3300048915 Bacteria 1894
177 Ga0496113_0007474 3300048916 Bacteria 7037
178 Ga0501031_0050630 3300049568 Bacteria 2706
179 Ga0501031_0163132 3300049568 Bacteria 1457
180 Ga0501038_0066732 3300049574 Bacteria 3063
181 Ga0501039_0062507 3300049575 Bacteria 2885
182 Ga0501040_0019436 3300049576 Bacteria 4518
183 Ga0501040_0066902 3300049576 Bacteria 2475
184 Ga0501041_0032572 3300049577 Bacteria 3150
185 Ga0501042_0009887 3300049578 Bacteria 6372
186 Ga0501048_0098200 3300049582 Bacteria 2066
187 Ga0501068_0006498 3300049584 Bacteria 6450
188 Ga0501068_0043046 3300049584 Bacteria 2716
189 Ga0501072_0005119 3300049588 Bacteria 9971
190 Ga0501074_0065474 3300049590 Bacteria 2616
191 Ga0501074_0094411 3300049590 Bacteria 2142
192 Ga0501074_0106135 3300049590 Bacteria 2011
193 Ga0501075_0033759 3300049591 Bacteria 3807
194 Ga0501075_0042208 3300049591 Bacteria 3419
195 Ga0501075_0091905 3300049591 Bacteria 2303
196 Ga0501075_0237591 3300049591 Bacteria 1389
197 Ga0501076_0011820 3300049592 Bacteria 6519
198 Ga0501076_0026969 3300049592 Bacteria 4453
199 Ga0501076_0038513 3300049592 Bacteria 3753
200 Ga0501076_0199586 3300049592 Bacteria 1633
201 Ga0501077_0015369 3300049593 Bacteria 4820
202 Ga0501077_0034597 3300049593 Bacteria 3216
203 Ga0501079_0077975 3300049741 Bacteria 2563
204 Ga0501079_0096113 3300049741 Bacteria 2296
205 Ga0501081_0071323 3300049743 Bacteria 2421
206 Ga0501045_0026148 3300049824 Bacteria 4196
207 nmdc:mga05p37_1912_c1 3300050507 Bacteria 24236
208 nmdc:mga06r32_115365_c1 3300050510 Bacteria 2645
209 nmdc:mga08y16_8654_c1 3300050511 Bacteria 10676
210 nmdc:mga0n895_107280_c1 3300050512 Bacteria 2806
211 nmdc:mga0n895_205678_c1 3300050512 Bacteria 1999
212 nmdc:mga0rr50_246720_c1 3300050513 Bacteria 1481
213 Ga0495612_0000549 3300053078 Bacteria 15060
214 Ga0501082_0045859 3300060353 Bacteria 3769
215 Ga0501082_0265368 3300060353 Bacteria 1494
216 Ga0530510_0104450 3300061734 Bacteria 2073

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039438 Ga0436360_0730041 Ga0436360_0730041_7302_8573 391
2 3300005985 Ga0081539_10000994 Ga0081539_1000099448 394
3 3300005440 Ga0070705_100028796 Ga0070705_1000287962 400
4 3300005546 Ga0070696_100030870 Ga0070696_1000308702 400
5 3300005549 Ga0070704_100015936 Ga0070704_1000159365 400
6 3300048905 Ga0496102_0028235 Ga0496102_0028235_2744_4162 400
7 3300048906 Ga0496103_0052594 Ga0496103_0052594_91_1509 400
8 3300048910 Ga0496107_0085530 Ga0496107_0085530_194_1612 400
9 3300005471 Ga0070698_100028368 Ga0070698_1000283685 401
10 3300005545 Ga0070695_100007899 Ga0070695_1000078997 401
11 3300009098 Ga0105245_10003819 Ga0105245_1000381914 405
12 3300009553 Ga0105249_10009218 Ga0105249_100092182 405
13 3300013308 Ga0157375_10003061 Ga0157375_100030619 405
14 3300048906 Ga0496103_0163961 Ga0496103_0163961_37_1275 405
15 3300048911 Ga0496108_0008678 Ga0496108_0008678_6546_7784 405
16 3300048912 Ga0496109_0013219 Ga0496109_0013219_3209_4447 405
17 3300048913 Ga0496110_0028343 Ga0496110_0028343_3145_4383 405
18 3300048914 Ga0496111_0020449 Ga0496111_0020449_96_1334 405
19 3300006173 Ga0070716_100122039 Ga0070716_1001220392 406
20 3300048915 Ga0496112_0001308 Ga0496112_0001308_15575_16864 407
21 3300005467 Ga0070706_100217485 Ga0070706_1002174852 409
22 3300005536 Ga0070697_100121647 Ga0070697_1001216473 410
23 3300009094 Ga0111539_10031003 Ga0111539_100310037 412
24 3300009148 Ga0105243_10005811 Ga0105243_100058115 412
25 3300009177 Ga0105248_10021891 Ga0105248_100218915 412
26 3300013297 Ga0157378_10003427 Ga0157378_100034278 412
27 3300014326 Ga0157380_10018871 Ga0157380_100188715 412
28 3300014745 Ga0157377_10003598 Ga0157377_100035986 412
29 3300035691 Ga0373931_0035810 Ga0373931_0035810_950_2188 412
30 3300048903 Ga0496100_0046431 Ga0496100_0046431_1115_2353 412
31 3300048915 Ga0496112_0147342 Ga0496112_0147342_939_2177 412
32 3300050513 nmdc:mga0rr50_246720_c1 nmdc:mga0rr50_246720_c1_177_1454 412
33 3300049568 Ga0501031_0163132 Ga0501031_0163132_35_1276 413
34 3300060353 Ga0501082_0265368 Ga0501082_0265368_242_1483 413
35 3300005985 Ga0081539_10032449 Ga0081539_100324493 414
36 3300005471 Ga0070698_100058020 Ga0070698_1000580203 415
37 3300009553 Ga0105249_10349757 Ga0105249_103497571 415
38 3300026041 Ga0207639_10019220 Ga0207639_100192202 415
39 3300013297 Ga0157378_10159064 Ga0157378_101590642 419
40 3300049584 Ga0501068_0006498 Ga0501068_0006498_4183_5484 419
41 3300028573 Ga0265334_10028373 Ga0265334_100283733 420
42 3300031242 Ga0265329_10008185 Ga0265329_100081853 420
43 3300031595 Ga0265313_10017745 Ga0265313_100177453 420
44 3300031711 Ga0265314_10013395 Ga0265314_100133954 420
45 3300049591 Ga0501075_0091905 Ga0501075_0091905_327_1610 422
46 3300049591 Ga0501075_0237591 Ga0501075_0237591_36_1319 422
47 3300049593 Ga0501077_0015369 Ga0501077_0015369_2741_4024 422
48 3300005445 Ga0070708_100013039 Ga0070708_1000130393 423
49 3300005467 Ga0070706_100005356 Ga0070706_1000053563 423
50 3300005536 Ga0070697_100042813 Ga0070697_1000428133 423
51 3300025910 Ga0207684_10008087 Ga0207684_100080874 423
52 3300025910 Ga0207684_10012043 Ga0207684_1001204310 425
53 3300025922 Ga0207646_10113894 Ga0207646_101138942 425
54 3300028563 Ga0265319_1002472 Ga0265319_10024726 425
55 3300028573 Ga0265334_10010385 Ga0265334_100103851 425
56 3300031240 Ga0265320_10015114 Ga0265320_100151142 425
57 3300031711 Ga0265314_10005664 Ga0265314_100056645 425
58 3300044673 Ga0453683_0127465 Ga0453683_0127465_223_1542 425
59 3300050512 nmdc:mga0n895_107280_c1 nmdc:mga0n895_107280_c1_276_1655 427
60 3300025910 Ga0207684_10049199 Ga0207684_100491993 428
61 3300049592 Ga0501076_0199586 Ga0501076_0199586_116_1474 428
62 3300005444 Ga0070694_100027185 Ga0070694_1000271852 429
63 3300005468 Ga0070707_100010776 Ga0070707_1000107763 429
64 3300014497 Ga0182008_10027263 Ga0182008_100272632 429
65 3300025922 Ga0207646_10077081 Ga0207646_100770812 429
66 3300025933 Ga0207706_10113508 Ga0207706_101135082 429
67 3300005618 Ga0068864_100007182 Ga0068864_1000071824 430
68 3300014325 Ga0163163_10208020 Ga0163163_102080201 430
69 3300028654 Ga0265322_10023087 Ga0265322_100230872 430
70 3300031344 Ga0265316_10054400 Ga0265316_100544001 430
71 3300032126 Ga0307415_100021146 Ga0307415_1000211463 431
72 3300053078 Ga0495612_0000549 Ga0495612_0000549_8729_10207 431
73 3300005468 Ga0070707_100000667 Ga0070707_10000066728 432
74 3300005518 Ga0070699_100015027 Ga0070699_1000150274 432
75 3300005518 Ga0070699_100061619 Ga0070699_1000616192 432
76 3300005546 Ga0070696_100000498 Ga0070696_1000004984 432
77 3300009147 Ga0114129_10079110 Ga0114129_100791102 432
78 3300025922 Ga0207646_10001518 Ga0207646_1000151811 432
79 3300031249 Ga0265339_10002034 Ga0265339_100020349 432
80 3300050507 nmdc:mga05p37_1912_c1 nmdc:mga05p37_1912_c1_5031_6362 432
81 3300050510 nmdc:mga06r32_115365_c1 nmdc:mga06r32_115365_c1_722_2053 432
82 3300025942 Ga0207689_10034175 Ga0207689_100341754 435
83 3300005356 Ga0070674_100012453 Ga0070674_1000124533 436
84 3300026075 Ga0207708_10122946 Ga0207708_101229463 436
85 3300032133 Ga0316583_10003685 Ga0316583_100036852 436
86 3300048915 Ga0496112_0000001 Ga0496112_0000001_419971_421416 437
87 3300049574 Ga0501038_0066732 Ga0501038_0066732_449_1771 438
88 3300049576 Ga0501040_0066902 Ga0501040_0066902_463_1785 438
89 3300049577 Ga0501041_0032572 Ga0501041_0032572_1246_2568 438
90 3300049588 Ga0501072_0005119 Ga0501072_0005119_5888_7210 438
91 3300049591 Ga0501075_0042208 Ga0501075_0042208_1217_2539 438
92 3300049592 Ga0501076_0038513 Ga0501076_0038513_454_1776 438
93 3300049593 Ga0501077_0034597 Ga0501077_0034597_1480_2802 438
94 3300049743 Ga0501081_0071323 Ga0501081_0071323_180_1502 438
95 3300049824 Ga0501045_0026148 Ga0501045_0026148_200_1522 438
96 3300060353 Ga0501082_0045859 Ga0501082_0045859_2211_3533 438
97 3300025918 Ga0207662_10025432 Ga0207662_100254322 440
98 3300048916 Ga0496113_0007474 Ga0496113_0007474_1974_3332 440
99 3300006871 Ga0075434_100175051 Ga0075434_1001750512 441
100 3300046455 Ga0495603_0084964 Ga0495603_0084964_396_1784 441
101 3300048905 Ga0496102_0086218 Ga0496102_0086218_385_1860 441
102 3300048907 Ga0496104_0086142 Ga0496104_0086142_66_1541 441
103 3300048908 Ga0496105_0041434 Ga0496105_0041434_287_1762 441
104 3300048912 Ga0496109_0045937 Ga0496109_0045937_660_2135 441
105 3300050512 nmdc:mga0n895_205678_c1 nmdc:mga0n895_205678_c1_68_1435 441
106 3300009098 Ga0105245_10225632 Ga0105245_102256322 442
107 3300005340 Ga0070689_100002540 Ga0070689_10000254010 445
108 3300005343 Ga0070687_100001169 Ga0070687_1000011696 445
109 3300005344 Ga0070661_100008893 Ga0070661_1000088939 445
110 3300005347 Ga0070668_100091533 Ga0070668_1000915332 445
111 3300005354 Ga0070675_100002119 Ga0070675_10000211915 445
112 3300005364 Ga0070673_100037121 Ga0070673_1000371215 445
113 3300005366 Ga0070659_100003736 Ga0070659_1000037366 445
114 3300005455 Ga0070663_100022799 Ga0070663_1000227995 445
115 3300005539 Ga0068853_100253538 Ga0068853_1002535381 445
116 3300005544 Ga0070686_100007578 Ga0070686_1000075786 445
117 3300005547 Ga0070693_100008406 Ga0070693_1000084066 445
118 3300005844 Ga0068862_100019428 Ga0068862_1000194283 445
119 3300006237 Ga0097621_100097384 Ga0097621_1000973842 445
120 3300025918 Ga0207662_10001113 Ga0207662_100011138 445
121 3300025923 Ga0207681_10022953 Ga0207681_100229532 445
122 3300025926 Ga0207659_10095910 Ga0207659_100959102 445
123 3300025932 Ga0207690_10012966 Ga0207690_100129665 445
124 3300025961 Ga0207712_10017977 Ga0207712_100179772 445
125 3300026067 Ga0207678_10027322 Ga0207678_100273224 445
126 3300026075 Ga0207708_10011599 Ga0207708_100115996 445
127 3300028380 Ga0268265_10061747 Ga0268265_100617472 445
128 3300028381 Ga0268264_10033681 Ga0268264_100336812 445
129 3300049582 Ga0501048_0098200 Ga0501048_0098200_170_1564 445
130 3300049590 Ga0501074_0106135 Ga0501074_0106135_507_1901 445
131 3300049592 Ga0501076_0026969 Ga0501076_0026969_748_2136 445
132 3300049741 Ga0501079_0077975 Ga0501079_0077975_157_1551 445
133 3300009094 Ga0111539_10043337 Ga0111539_100433375 446
134 3300014326 Ga0157380_10082224 Ga0157380_100822242 446
135 3300025922 Ga0207646_10013218 Ga0207646_100132186 446
136 3300025922 Ga0207646_10149239 Ga0207646_101492392 446
137 3300026075 Ga0207708_10037131 Ga0207708_100371312 446
138 3300026116 Ga0207674_10142509 Ga0207674_101425092 446
139 3300027907 Ga0207428_10022842 Ga0207428_100228423 446
140 3300050511 nmdc:mga08y16_8654_c1 nmdc:mga08y16_8654_c1_1021_2415 446
141 3300036401 Ga0373937_0141928 Ga0373937_0141928_724_2163 447
142 3300005471 Ga0070698_100237338 Ga0070698_1002373382 448
143 3300006844 Ga0075428_100000274 Ga0075428_10000027450 448
144 3300006847 Ga0075431_100077198 Ga0075431_1000771982 448
145 3300006880 Ga0075429_100034909 Ga0075429_1000349093 448
146 3300014968 Ga0157379_10092216 Ga0157379_100922162 448
147 3300048907 Ga0496104_0014378 Ga0496104_0014378_3404_4765 448
148 3300048912 Ga0496109_0111861 Ga0496109_0111861_56_1417 448
149 3300005468 Ga0070707_100003926 Ga0070707_10000392611 449
150 3300005530 Ga0070679_100097469 Ga0070679_1000974692 449
151 3300005535 Ga0070684_100004630 Ga0070684_1000046309 449
152 3300005546 Ga0070696_100092337 Ga0070696_1000923373 449
153 3300005549 Ga0070704_100149081 Ga0070704_1001490812 449
154 3300005564 Ga0070664_100103891 Ga0070664_1001038912 449
155 3300025921 Ga0207652_10134230 Ga0207652_101342301 449
156 3300025922 Ga0207646_10053348 Ga0207646_100533482 449
157 3300025945 Ga0207679_10216756 Ga0207679_102167562 449
158 3300026121 Ga0207683_10044364 Ga0207683_100443642 449
159 3300048915 Ga0496112_0211952 Ga0496112_0211952_130_1533 449
160 3300005471 Ga0070698_100005263 Ga0070698_10000526312 450
161 3300028563 Ga0265319_1022299 Ga0265319_10222992 450
162 3300049568 Ga0501031_0050630 Ga0501031_0050630_1167_2561 450
163 3300049584 Ga0501068_0043046 Ga0501068_0043046_600_1988 450
164 3300049590 Ga0501074_0065474 Ga0501074_0065474_764_2152 450
165 3300049592 Ga0501076_0011820 Ga0501076_0011820_768_2162 450
166 3300035398 Ga0316574_0078103 Ga0316574_0078103_370_1758 451
167 3300005329 Ga0070683_100019650 Ga0070683_1000196502 452
168 3300005336 Ga0070680_100145834 Ga0070680_1001458342 452
169 3300005365 Ga0070688_100043036 Ga0070688_1000430363 452
170 3300005441 Ga0070700_100011330 Ga0070700_1000113302 452
171 3300005457 Ga0070662_100023015 Ga0070662_1000230156 452
172 3300005459 Ga0068867_100034599 Ga0068867_1000345992 452
173 3300005466 Ga0070685_10002555 Ga0070685_100025552 452
174 3300005471 Ga0070698_100047053 Ga0070698_1000470532 452
175 3300005518 Ga0070699_100150984 Ga0070699_1001509843 452
176 3300005518 Ga0070699_100177849 Ga0070699_1001778491 452
177 3300005536 Ga0070697_100019147 Ga0070697_1000191472 452
178 3300005543 Ga0070672_100018837 Ga0070672_1000188372 452
179 3300005546 Ga0070696_100024426 Ga0070696_1000244262 452
180 3300005549 Ga0070704_100087579 Ga0070704_1000875792 452
181 3300005563 Ga0068855_100178092 Ga0068855_1001780922 452
182 3300005615 Ga0070702_100001598 Ga0070702_1000015986 452
183 3300005618 Ga0068864_100042039 Ga0068864_1000420393 452
184 3300005842 Ga0068858_100026987 Ga0068858_1000269876 452
185 3300005843 Ga0068860_100021621 Ga0068860_1000216217 452
186 3300005843 Ga0068860_100130978 Ga0068860_1001309783 452
187 3300006881 Ga0068865_100010924 Ga0068865_1000109247 452
188 3300009148 Ga0105243_10087166 Ga0105243_100871662 452
189 3300009553 Ga0105249_10048444 Ga0105249_100484442 452
190 3300025908 Ga0207643_10006803 Ga0207643_100068035 452
191 3300025925 Ga0207650_10095384 Ga0207650_100953842 452
192 3300025933 Ga0207706_10006643 Ga0207706_100066435 452
193 3300025937 Ga0207669_10056598 Ga0207669_100565982 452
194 3300025940 Ga0207691_10074749 Ga0207691_100747492 452
195 3300025972 Ga0207668_10130836 Ga0207668_101308362 452
196 3300026035 Ga0207703_10066435 Ga0207703_100664352 452
197 3300026089 Ga0207648_10015276 Ga0207648_100152763 452
198 3300026116 Ga0207674_10007329 Ga0207674_1000732910 452
199 3300026121 Ga0207683_10034383 Ga0207683_100343832 452
200 3300027907 Ga0207428_10101319 Ga0207428_101013192 452
201 3300028380 Ga0268265_10080432 Ga0268265_100804322 452
202 3300032002 Ga0307416_100004363 Ga0307416_1000043638 452
203 3300035091 Ga0373951_0015115 Ga0373951_0015115_113_1471 452
204 3300048907 Ga0496104_0007257 Ga0496104_0007257_1805_3232 452
205 3300048908 Ga0496105_0015492 Ga0496105_0015492_1591_3018 452
206 3300048911 Ga0496108_0030028 Ga0496108_0030028_1601_3028 452
207 3300048912 Ga0496109_0003986 Ga0496109_0003986_1712_3139 452
208 3300048914 Ga0496111_0002640 Ga0496111_0002640_6287_7714 452
209 3300048915 Ga0496112_0016558 Ga0496112_0016558_1891_3306 452
210 3300049575 Ga0501039_0062507 Ga0501039_0062507_702_2060 452
211 3300049576 Ga0501040_0019436 Ga0501040_0019436_1911_3269 452
212 3300049578 Ga0501042_0009887 Ga0501042_0009887_2592_3950 452
213 3300049590 Ga0501074_0094411 Ga0501074_0094411_76_1434 452
214 3300049591 Ga0501075_0033759 Ga0501075_0033759_1257_2615 452
215 3300049741 Ga0501079_0096113 Ga0501079_0096113_829_2187 452
216 3300061734 Ga0530510_0104450 Ga0530510_0104450_493_1851 452

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03841

SelA

L-seryl-tRNA selenium transferase

102

456

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3w1i-assembly1.cif.gz_E crystal structure of the n-terminal truncated selenocysteine synthase sela 0.9486 70 451
3w1i-assembly1.cif.gz_E crystal structure of the n-terminal truncated selenocysteine synthase sela 0.9251 70 451
3wco-assembly1.cif.gz_B crystal structure of the depentamerized mutant of n-terminal truncated selenocysteine synthase sela 0.8986 73 452
3wco-assembly1.cif.gz_A crystal structure of the depentamerized mutant of n-terminal truncated selenocysteine synthase sela 0.8977 73 452
3wco-assembly1.cif.gz_B crystal structure of the depentamerized mutant of n-terminal truncated selenocysteine synthase sela 0.8874 73 452
ID Description Score Start End Superfamily
3wcnB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9275 91 351 3.40.640.10
3wcnB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9206 91 351 3.40.640.10
3w1iA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.8599 354 451 3.90.1150.180
4u1tA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.764 113 334 3.40.640.10
3f9tB01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.7558 397 449 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7C4YYL0-F1-model_v4 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) 0.9755 172 452 GO:0001514
GO:0001717
GO:0004125
GO:0005737
AF-A0A399Z401-F1-model_v4 L-seryl-tRNA(Sec) selenium transferase 0.9754 219 451 GO:0001514
GO:0004125
GO:0005737
AF-A0A3L7XET1-F1-model_v4 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) 0.9752 252 451 GO:0001514
GO:0001717
GO:0004125
GO:0005737
AF-A0A7V5TP48-F1-model_v4 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) 0.9726 109 451 GO:0001514
GO:0001717
GO:0004125
GO:0005737
AF-X1CNM0-F1-model_v4 L-seryl-tRNA(Sec) selenium transferase 0.972 215 451 GO:0001514
GO:0004125
GO:0005737

Feature Viewer

pLDDT pTM Quality
92.08 0.86 High
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Predicted Structure (AlphaFold2)

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