F322984

General Info

Members Datasets Scaffolds Average Seq Length
212 132 424 364

Family's Representative Sequence

Representative Sequence 3300030760|Ga0265762_1001949|Ga0265762_10019493
Length 408
Sequence MTRTIVAGNLFVTIVKEYSECGLESALRLPVGMHFMSQLGKLTSTVKRAAEDAGFELCGVAPTSHAPELDHFPPWIASGRAGEMKYLEARDDRGDLKRASLARVAPWARSVVVCAINYNTAQPYSTEFDNGSSGNASRGWISRYAWGREDYHQAVLRRLRRVEDALRRAAEAEVSSESAAEIVTRSYVDTGPIVERVVAKYAGVGWIGKNTCIINQKKGSWLFLGVILTSLELEPDLPAPDRCGTCARCIEACPTDALIAPYQLDSNLCISYLTIEKRGEIPEEMRTGMGRHVFGCDICQDVCPWNRKAPATSAPEFASRPEMVNPALDWLAEISEEEFRTTFRASPVRRAKRSGLRRNAVIAAGNSGGFKFLPLLEKLSSDEDQTVAATARWAREKISDREENKEEQ

Samples

Sample ID Description Type Environment
1 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
67 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
68 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
69 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
103 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
104 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
107 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
115 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
116 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
117 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
118 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 96.7
Metatranscriptomes 3.3
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.6
Rhizosphere 92.45
Stem 0
Stem Tuber 0
Unclassified 4.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265762_1001949 3300030760 Bacteria 3749
2 Ga0070670_100149551 3300005331 Bacteria 2021
3 Ga0068869_100001656 3300005334 Bacteria 13302
4 Ga0070666_10106038 3300005335 Bacteria 1941
5 Ga0070680_100094699 3300005336 Bacteria 2475
6 Ga0068868_100002821 3300005338 Bacteria 12036
7 Ga0068868_100005778 3300005338 Bacteria 8714
8 Ga0070671_100087273 3300005355 Bacteria 2611
9 Ga0070688_100108998 3300005365 Bacteria 1838
10 Ga0070709_10000318 3300005434 Bacteria 30634
11 Ga0070709_10015020 3300005434 Bacteria 4396
12 Ga0070709_10016803 3300005434 Bacteria 4186
13 Ga0070709_10066789 3300005434 Bacteria 2308
14 Ga0070709_10233507 3300005434 Bacteria 1317
15 Ga0070714_100039856 3300005435 Bacteria 3957
16 Ga0070714_100174261 3300005435 Bacteria 1954
17 Ga0070713_100000419 3300005436 Bacteria 27067
18 Ga0070713_100002203 3300005436 Bacteria 12625
19 Ga0070710_10005056 3300005437 Bacteria 6243
20 Ga0070710_10022260 3300005437 Bacteria 3312
21 Ga0070711_100217932 3300005439 Bacteria 1482
22 Ga0070708_100000249 3300005445 Bacteria 40182
23 Ga0070708_100004178 3300005445 Bacteria 11342
24 Ga0070708_100020777 3300005445 Bacteria 5542
25 Ga0070708_100101978 3300005445 Bacteria 2629
26 Ga0070681_10201188 3300005458 Bacteria 1910
27 Ga0070685_10024882 3300005466 Bacteria 3292
28 Ga0070706_100000595 3300005467 Bacteria 41856
29 Ga0070706_100010700 3300005467 Bacteria 8516
30 Ga0070706_100217580 3300005467 Bacteria 1783
31 Ga0070706_100368875 3300005467 Unclassified 1337
32 Ga0070707_100004455 3300005468 Bacteria 13112
33 Ga0070707_100029393 3300005468 Bacteria 5233
34 Ga0070707_100055027 3300005468 Unclassified 3814
35 Ga0070707_100423131 3300005468 Bacteria 1292
36 Ga0070698_100000133 3300005471 Bacteria 65381
37 Ga0070698_100001114 3300005471 Bacteria 29637
38 Ga0070699_100000354 3300005518 Bacteria 44648
39 Ga0070699_100006520 3300005518 Bacteria 10162
40 Ga0070699_100082247 3300005518 Bacteria 2807
41 Ga0070679_100193379 3300005530 Bacteria 2002
42 Ga0070697_100000255 3300005536 Bacteria 43116
43 Ga0070697_100000804 3300005536 Bacteria 23566
44 Ga0070697_100161770 3300005536 Bacteria 1891
45 Ga0068853_100056509 3300005539 Bacteria 3384
46 Ga0068855_100271667 3300005563 Bacteria 1885
47 Ga0070664_100196678 3300005564 Bacteria 1797
48 Ga0068856_100002725 3300005614 Bacteria 18085
49 Ga0068852_100168155 3300005616 Bacteria 2053
50 Ga0068859_100012521 3300005617 Bacteria 8532
51 Ga0068861_100057257 3300005719 Bacteria 2976
52 Ga0068851_10060871 3300005834 Bacteria 1934
53 Ga0068863_100240800 3300005841 Bacteria 1746
54 Ga0068858_100000802 3300005842 Bacteria 32930
55 Ga0068858_100208014 3300005842 Unclassified 1851
56 Ga0068860_100033543 3300005843 Bacteria 4926
57 Ga0070717_10034944 3300006028 Bacteria 4065
58 Ga0070717_10207128 3300006028 Bacteria 1720
59 Ga0070715_10042038 3300006163 Bacteria 1919
60 Ga0070716_100000122 3300006173 Bacteria 30821
61 Ga0070716_100001268 3300006173 Bacteria 11131
62 Ga0070712_100000818 3300006175 Bacteria 18457
63 Ga0070712_100002921 3300006175 Bacteria 10592
64 Ga0070712_100011645 3300006175 Bacteria 5586
65 Ga0070712_100028463 3300006175 Bacteria 3738
66 Ga0097621_100000357 3300006237 Bacteria 31608
67 Ga0097621_100021921 3300006237 Bacteria 4950
68 Ga0068871_100005659 3300006358 Bacteria 8767
69 Ga0068871_100008234 3300006358 Bacteria 7493
70 Ga0068871_100136354 3300006358 Bacteria 2084
71 Ga0075434_100144068 3300006871 Bacteria 2403
72 Ga0068865_100111318 3300006881 Bacteria 2020
73 Ga0097620_100012522 3300006931 Bacteria 8532
74 Ga0075435_100015730 3300007076 Bacteria 5691
75 Ga0075435_100060988 3300007076 Bacteria 3059
76 Ga0099794_10020900 3300007265 Bacteria 2968
77 Ga0099794_10087274 3300007265 Bacteria 1545
78 Ga0105240_10222302 3300009093 Bacteria 2199
79 Ga0105245_10004054 3300009098 Bacteria 13013
80 Ga0105241_10001985 3300009174 Bacteria 15492
81 Ga0105241_10008557 3300009174 Bacteria 7525
82 Ga0105242_10011534 3300009176 Bacteria 6797
83 Ga0105248_10204318 3300009177 Bacteria 2226
84 Ga0105237_10025549 3300009545 Bacteria 6038
85 Ga0105237_10026217 3300009545 Bacteria 5958
86 Ga0105237_10152156 3300009545 Bacteria 2310
87 Ga0105238_10043822 3300009551 Bacteria 4526
88 Ga0105238_10468454 3300009551 Bacteria 1258
89 Ga0105239_10469398 3300010375 Unclassified 1429
90 Ga0105239_10574535 3300010375 Bacteria 1285
91 Ga0105246_10126774 3300011119 Unclassified 1900
92 Ga0157373_10001041 3300013100 Bacteria 21375
93 Ga0157370_10036871 3300013104 Bacteria 4743
94 Ga0157369_10024299 3300013105 Bacteria 6744
95 Ga0157369_10075926 3300013105 Bacteria 3602
96 Ga0157369_10350813 3300013105 Bacteria 1532
97 Ga0157374_10025874 3300013296 Bacteria 5275
98 Ga0157374_10026893 3300013296 Bacteria 5181
99 Ga0157374_10076345 3300013296 Bacteria 3168
100 Ga0157374_10171657 3300013296 Unclassified 2116
101 Ga0157374_10181264 3300013296 Bacteria 2057
102 Ga0157378_10000292 3300013297 Bacteria 48717
103 Ga0163162_10000471 3300013306 Bacteria 37412
104 Ga0163162_10111618 3300013306 Bacteria 2832
105 Ga0157372_10005772 3300013307 Bacteria 13190
106 Ga0157372_10028282 3300013307 Bacteria 6119
107 Ga0157375_10055742 3300013308 Bacteria 3898
108 Ga0163163_10002556 3300014325 Bacteria 15416
109 Ga0157379_10016594 3300014968 Bacteria 6476
110 Ga0157376_10287044 3300014969 Bacteria 1552
111 Ga0213876_10014747 3300021384 Bacteria 4141
112 Ga0224569_101697 3300022732 Bacteria 1829
113 Ga0224572_1009942 3300024225 Bacteria 1781
114 Ga0224572_1010914 3300024225 Bacteria 1714
115 Ga0224572_1011800 3300024225 Bacteria 1654
116 Ga0228598_1000327 3300024227 Bacteria 9314
117 Ga0228598_1001303 3300024227 Bacteria 5480
118 Ga0207692_10017716 3300025898 Bacteria 3182
119 Ga0207710_10077318 3300025900 Bacteria 1537
120 Ga0207647_10004209 3300025904 Bacteria 10673
121 Ga0207685_10037302 3300025905 Bacteria 1788
122 Ga0207699_10000270 3300025906 Bacteria 28509
123 Ga0207699_10004241 3300025906 Bacteria 6860
124 Ga0207699_10010931 3300025906 Bacteria 4571
125 Ga0207699_10054769 3300025906 Bacteria 2371
126 Ga0207684_10000283 3300025910 Bacteria 73904
127 Ga0207684_10001082 3300025910 Bacteria 30517
128 Ga0207684_10014527 3300025910 Bacteria 6784
129 Ga0207684_10112329 3300025910 Bacteria 2332
130 Ga0207684_10176772 3300025910 Bacteria 1840
131 Ga0207654_10008624 3300025911 Bacteria 5165
132 Ga0207707_10202870 3300025912 Bacteria 1729
133 Ga0207693_10000011 3300025915 Bacteria 160684
134 Ga0207693_10004452 3300025915 Bacteria 11839
135 Ga0207693_10015724 3300025915 Bacteria 6064
136 Ga0207693_10070295 3300025915 Bacteria 2739
137 Ga0207663_10021553 3300025916 Bacteria 3670
138 Ga0207657_10012645 3300025919 Bacteria 8320
139 Ga0207652_10042769 3300025921 Bacteria 3857
140 Ga0207646_10003114 3300025922 Bacteria 19045
141 Ga0207646_10004662 3300025922 Bacteria 14788
142 Ga0207646_10007481 3300025922 Bacteria 11088
143 Ga0207646_10115803 3300025922 Bacteria 2407
144 Ga0207687_10177431 3300025927 Bacteria 1648
145 Ga0207700_10000359 3300025928 Bacteria 26508
146 Ga0207700_10016603 3300025928 Bacteria 4896
147 Ga0207700_10079885 3300025928 Bacteria 2548
148 Ga0207664_10223398 3300025929 Bacteria 1634
149 Ga0207690_10071475 3300025932 Bacteria 2393
150 Ga0207706_10025736 3300025933 Bacteria 5271
151 Ga0207665_10002642 3300025939 Bacteria 12045
152 Ga0207665_10010292 3300025939 Bacteria 6140
153 Ga0207691_10168814 3300025940 Bacteria 1916
154 Ga0207689_10000394 3300025942 Bacteria 41129
155 Ga0207679_10062068 3300025945 Bacteria 2784
156 Ga0207640_10111287 3300025981 Bacteria 1942
157 Ga0207677_10013818 3300026023 Unclassified 4690
158 Ga0207703_10002763 3300026035 Bacteria 15032
159 Ga0207703_10049344 3300026035 Unclassified 3403
160 Ga0207702_10255270 3300026078 Bacteria 1648
161 Ga0207648_10062076 3300026089 Bacteria 3258
162 Ga0207675_100314301 3300026118 Bacteria 1528
163 Ga0265356_1000186 3300028017 Bacteria 11660
164 Ga0268264_10055381 3300028381 Bacteria 3314
165 Ga0265338_10038958 3300028800 Bacteria 4493
166 Ga0265762_1000104 3300030760 Bacteria 12180
167 Ga0265762_1000805 3300030760 Bacteria 5596
168 Ga0265762_1010492 3300030760 Bacteria 1655
169 Ga0265770_1008775 3300030878 Bacteria 1447
170 Ga0265760_10000072 3300031090 Bacteria 25648
171 Ga0265760_10000582 3300031090 Bacteria 10360
172 Ga0265325_10075128 3300031241 Bacteria 1688
173 Ga0265339_10034680 3300031249 Bacteria 2834
174 Ga0265316_10001274 3300031344 Bacteria 27075
175 Ga0265314_10000198 3300031711 Bacteria 89925
176 Ga0265314_10087216 3300031711 Bacteria 2041
177 Ga0265342_10023963 3300031712 Bacteria 3857
178 Ga0373955_0047982 3300035172 Bacteria 2314
179 Ga0373931_0003650 3300035691 Bacteria 6955
180 Ga0373933_0086088 3300035724 Bacteria 1933
181 Ga0373925_0010516 3300037068 Bacteria 6713
182 Ga0373925_0273193 3300037068 Bacteria 1360
183 Ga0436365_0767090 3300039437 Bacteria 11651
184 Ga0466967_0000391 3300045976 Bacteria 20499
185 Ga0466967_0081150 3300045976 Bacteria 2929
186 Ga0495580_0001070 3300046472 Bacteria 24068
187 Ga0495580_0001650 3300046472 Bacteria 19635
188 Ga0495580_0004692 3300046472 Bacteria 11463
189 Ga0495580_0031770 3300046472 Bacteria 3813
190 Ga0495580_0109653 3300046472 Bacteria 1916
191 Ga0495639_0044157 3300046475 Bacteria 2015
192 Ga0495594_0102804 3300046499 Bacteria 1608
193 Ga0495665_0023387 3300046531 Bacteria 3319
194 Ga0495581_0008263 3300047315 Bacteria 6032
195 Ga0495636_0015130 3300047318 Bacteria 3073
196 Ga0495674_0207488 3300047319 Bacteria 1624
197 Ga0495674_0275117 3300047319 Bacteria 1380
198 Ga0495602_0095505 3300048088 Bacteria 2454
199 Ga0496100_0003519 3300048903 Bacteria 8179
200 Ga0496101_0003750 3300048904 Bacteria 9484
201 Ga0496102_0026539 3300048905 Bacteria 5168
202 Ga0496103_0199997 3300048906 Bacteria 1285
203 Ga0496105_0022170 3300048908 Bacteria 5144
204 Ga0496106_0050410 3300048909 Bacteria 3138
205 Ga0496106_0176150 3300048909 Bacteria 1697
206 Ga0496108_0265767 3300048911 Bacteria 1493
207 Ga0496110_0072744 3300048913 Bacteria 3051
208 Ga0496111_0057907 3300048914 Unclassified 2805
209 Ga0496112_0060812 3300048915 Bacteria 3722
210 Ga0496112_0115762 3300048915 Bacteria 2651
211 Ga0496114_0058055 3300048917 Bacteria 3231
212 Ga0496115_0144991 3300048918 Bacteria 1959
213 Ga0265762_1001949
214 Ga0070670_100149551
215 Ga0068869_100001656
216 Ga0070666_10106038
217 Ga0070680_100094699
218 Ga0068868_100002821
219 Ga0068868_100005778
220 Ga0070671_100087273
221 Ga0070688_100108998
222 Ga0070709_10000318
223 Ga0070709_10015020
224 Ga0070709_10016803
225 Ga0070709_10066789
226 Ga0070709_10233507
227 Ga0070714_100039856
228 Ga0070714_100174261
229 Ga0070713_100000419
230 Ga0070713_100002203
231 Ga0070710_10005056
232 Ga0070710_10022260
233 Ga0070711_100217932
234 Ga0070708_100000249
235 Ga0070708_100004178
236 Ga0070708_100020777
237 Ga0070708_100101978
238 Ga0070681_10201188
239 Ga0070685_10024882
240 Ga0070706_100000595
241 Ga0070706_100010700
242 Ga0070706_100217580
243 Ga0070706_100368875
244 Ga0070707_100004455
245 Ga0070707_100029393
246 Ga0070707_100055027
247 Ga0070707_100423131
248 Ga0070698_100000133
249 Ga0070698_100001114
250 Ga0070699_100000354
251 Ga0070699_100006520
252 Ga0070699_100082247
253 Ga0070679_100193379
254 Ga0070697_100000255
255 Ga0070697_100000804
256 Ga0070697_100161770
257 Ga0068853_100056509
258 Ga0068855_100271667
259 Ga0070664_100196678
260 Ga0068856_100002725
261 Ga0068852_100168155
262 Ga0068859_100012521
263 Ga0068861_100057257
264 Ga0068851_10060871
265 Ga0068863_100240800
266 Ga0068858_100000802
267 Ga0068858_100208014
268 Ga0068860_100033543
269 Ga0070717_10034944
270 Ga0070717_10207128
271 Ga0070715_10042038
272 Ga0070716_100000122
273 Ga0070716_100001268
274 Ga0070712_100000818
275 Ga0070712_100002921
276 Ga0070712_100011645
277 Ga0070712_100028463
278 Ga0097621_100000357
279 Ga0097621_100021921
280 Ga0068871_100005659
281 Ga0068871_100008234
282 Ga0068871_100136354
283 Ga0075434_100144068
284 Ga0068865_100111318
285 Ga0097620_100012522
286 Ga0075435_100015730
287 Ga0075435_100060988
288 Ga0099794_10020900
289 Ga0099794_10087274
290 Ga0105240_10222302
291 Ga0105245_10004054
292 Ga0105241_10001985
293 Ga0105241_10008557
294 Ga0105242_10011534
295 Ga0105248_10204318
296 Ga0105237_10025549
297 Ga0105237_10026217
298 Ga0105237_10152156
299 Ga0105238_10043822
300 Ga0105238_10468454
301 Ga0105239_10469398
302 Ga0105239_10574535
303 Ga0105246_10126774
304 Ga0157373_10001041
305 Ga0157370_10036871
306 Ga0157369_10024299
307 Ga0157369_10075926
308 Ga0157369_10350813
309 Ga0157374_10025874
310 Ga0157374_10026893
311 Ga0157374_10076345
312 Ga0157374_10171657
313 Ga0157374_10181264
314 Ga0157378_10000292
315 Ga0163162_10000471
316 Ga0163162_10111618
317 Ga0157372_10005772
318 Ga0157372_10028282
319 Ga0157375_10055742
320 Ga0163163_10002556
321 Ga0157379_10016594
322 Ga0157376_10287044
323 Ga0213876_10014747
324 Ga0224569_101697
325 Ga0224572_1009942
326 Ga0224572_1010914
327 Ga0224572_1011800
328 Ga0228598_1000327
329 Ga0228598_1001303
330 Ga0207692_10017716
331 Ga0207710_10077318
332 Ga0207647_10004209
333 Ga0207685_10037302
334 Ga0207699_10000270
335 Ga0207699_10004241
336 Ga0207699_10010931
337 Ga0207699_10054769
338 Ga0207684_10000283
339 Ga0207684_10001082
340 Ga0207684_10014527
341 Ga0207684_10112329
342 Ga0207684_10176772
343 Ga0207654_10008624
344 Ga0207707_10202870
345 Ga0207693_10000011
346 Ga0207693_10004452
347 Ga0207693_10015724
348 Ga0207693_10070295
349 Ga0207663_10021553
350 Ga0207657_10012645
351 Ga0207652_10042769
352 Ga0207646_10003114
353 Ga0207646_10004662
354 Ga0207646_10007481
355 Ga0207646_10115803
356 Ga0207687_10177431
357 Ga0207700_10000359
358 Ga0207700_10016603
359 Ga0207700_10079885
360 Ga0207664_10223398
361 Ga0207690_10071475
362 Ga0207706_10025736
363 Ga0207665_10002642
364 Ga0207665_10010292
365 Ga0207691_10168814
366 Ga0207689_10000394
367 Ga0207679_10062068
368 Ga0207640_10111287
369 Ga0207677_10013818
370 Ga0207703_10002763
371 Ga0207703_10049344
372 Ga0207702_10255270
373 Ga0207648_10062076
374 Ga0207675_100314301
375 Ga0265356_1000186
376 Ga0268264_10055381
377 Ga0265338_10038958
378 Ga0265762_1000104
379 Ga0265762_1000805
380 Ga0265762_1010492
381 Ga0265770_1008775
382 Ga0265760_10000072
383 Ga0265760_10000582
384 Ga0265325_10075128
385 Ga0265339_10034680
386 Ga0265316_10001274
387 Ga0265314_10000198
388 Ga0265314_10087216
389 Ga0265342_10023963
390 Ga0373955_0047982
391 Ga0373931_0003650
392 Ga0373933_0086088
393 Ga0373925_0010516
394 Ga0373925_0273193
395 Ga0436365_0767090
396 Ga0466967_0000391
397 Ga0466967_0081150
398 Ga0495580_0001070
399 Ga0495580_0001650
400 Ga0495580_0004692
401 Ga0495580_0031770
402 Ga0495580_0109653
403 Ga0495639_0044157
404 Ga0495594_0102804
405 Ga0495665_0023387
406 Ga0495581_0008263
407 Ga0495636_0015130
408 Ga0495674_0207488
409 Ga0495674_0275117
410 Ga0495602_0095505
411 Ga0496100_0003519
412 Ga0496101_0003750
413 Ga0496102_0026539
414 Ga0496103_0199997
415 Ga0496105_0022170
416 Ga0496106_0050410
417 Ga0496106_0176150
418 Ga0496108_0265767
419 Ga0496110_0072744
420 Ga0496111_0057907
421 Ga0496112_0060812
422 Ga0496112_0115762
423 Ga0496114_0058055
424 Ga0496115_0144991

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13484

Fer4_16

4Fe-4S double cluster binding domain

242

306

0.99

PF08331

QueG_DUF1730

Epoxyqueuosine reductase QueG, DUF1730

98

190

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hwp-assembly1.cif.gz_A structure of a3_bgfpd, an artificial bi-domain protein based on two different alpharep domains : a3 and a gfp binding domain (bgfpd) 0.965 328 371
4jw2-assembly1.cif.gz_A selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alpharep) 0.9587 329 373
5n3u-assembly1.cif.gz_A-2 the structure of the complex of cpce and cpcf of phycocyanin lyase from nostoc sp. pcc7120 0.9537 328 372
5t8y-assembly1.cif.gz_A structure of epoxyqueuosine reductase from bacillus subtilis with the asp134 catalytic loop swung out of the active site. 0.8978 9 371
5d0b-assembly2.cif.gz_B crystal structure of epoxyqueuosine reductase with a trna-tyr epoxyqueuosine-modified trna stem loop 0.8945 9 371
ID Description Score Start End Superfamily
4jw2A00 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.9587 329 373 1.25.10.10
af_Q556G4_163_296_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.9565 328 372 1.25.10.10
af_Q2FX88_260_379_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.9375 285 371 1.25.10.10
af_A4I2C0_165_324_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.9213 301 373 1.25.10.10
af_Q8I701_33_189_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.9126 301 373 1.25.10.10
ID Description Score Start End GO Terms
AF-W4LTG1-F1-model_v4 4Fe-4S ferredoxin-type domain-containing protein 0.9865 176 373 GO:0008033
GO:0008616
GO:0046872
GO:0051539
GO:0052693
AF-A0A1M2YPF3-F1-model_v4 deleted 0.9749 207 342
AF-A0A3D3ZVK2-F1-model_v4 tRNA epoxyqueuosine(34) reductase QueG 0.9739 204 373 GO:0008033
GO:0008616
GO:0046872
GO:0051539
GO:0052693
AF-A0A3D5HK05-F1-model_v4 tRNA epoxyqueuosine(34) reductase QueG 0.9735 179 371 GO:0008033
GO:0008616
GO:0046872
GO:0051539
GO:0052693
AF-A0A836U205-F1-model_v4 tRNA epoxyqueuosine(34) reductase QueG (EC 1.17.99.6) 0.9729 188 371 GO:0008033
GO:0008616
GO:0046872
GO:0051539
GO:0052693

Map