F321592

General Info

Members Datasets Scaffolds Average Seq Length
211 173 186 428

Family's Representative Sequence

Representative Sequence 3300011119|Ga0105246_10071289|Ga0105246_100712892
Length 459
Sequence MTDRPREGNRLVNMSTSEAGSTAPAIAADAVARLSATSLSWRHKAVPADANGTTAGDFIHACHTLAELQTPLLTLDGRALEANADRLAAWCVEKGVKLAPHGKTTMAPQLWAEQLERGAWGITLANFAQLRVAREFGVRKLQLANSLTDPHAIEWVASVVGPEQTIVSWVDSVATVELIGSTLEAAGSRAVLDVLVELGAHGGRTGARGIEAALEVARAAAVSPHVRLVGVSGYEGSLAHTADADALAAVRGYLGQMLRLHERLLADGLYGSDELIVTAGGSAYFDDVVDVLSPCITEGDGAGNGKGKRVELLIRSGAYIIHDDGFYRVISPFSRHGGKPFSSAMHGWARVVSQPEPGLALLDAGKRDLPVDEGLPRPQLIGPALGGPMSPLEGAEITAVNDQHSFLSFDPATTTVRLGDVVRLGLSHPCTAFDKWTLIPVLADTDGDQTVVDLIHTFF

Samples

Sample ID Description Type Environment
1 2643221692 Nocardia sp. Root136 Isolate Unclassified
2 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
3 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
4 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
5 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
6 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
7 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
8 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
9 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
10 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
11 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
12 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
13 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
14 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
15 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
16 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
17 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
18 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
19 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
20 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
21 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
22 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
25 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
26 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
27 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
28 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
37 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
38 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
39 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
118 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
119 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
120 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
123 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
162 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
163 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
168 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
171 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
172 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
173 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.15
Metatranscriptomes 0
Isolates 11.85

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 7.58
Nodule 0
Rhizoplane 7.58
Rhizosphere 79.62
Stem 0
Stem Tuber 0
Unclassified 4.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000233 3300002773 Bacteria 37300
2 rootL2_10100046 3300003322 Bacteria 9400
3 Ga0055539_1000005 3300003752 Bacteria 609598
4 Ga0055533_1000001 3300003756 Bacteria 1863437
5 Ga0055525_1000380 3300003759 Bacteria 29022
6 Ga0055541_1000669 3300003841 Bacteria 8899
7 Ga0068869_100033047 3300005334 Bacteria 3650
8 Ga0070682_100049052 3300005337 Bacteria 2631
9 Ga0068868_100011819 3300005338 Bacteria 6365
10 Ga0070660_100090715 3300005339 Bacteria 2409
11 Ga0070660_100202866 3300005339 Bacteria 1609
12 Ga0070668_100059480 3300005347 Bacteria 2958
13 Ga0070688_100036489 3300005365 Bacteria 2990
14 Ga0070688_100079485 3300005365 Bacteria 2119
15 Ga0070659_100107432 3300005366 Bacteria 2250
16 Ga0070667_100029624 3300005367 Bacteria 4563
17 Ga0070667_100073359 3300005367 Bacteria 2918
18 Ga0070710_10000779 3300005437 Bacteria 15236
19 Ga0070711_100003202 3300005439 Bacteria 9502
20 Ga0070705_100022673 3300005440 Bacteria 3358
21 Ga0070663_100059278 3300005455 Bacteria 2751
22 Ga0068867_100122720 3300005459 Bacteria 2009
23 Ga0070685_10066982 3300005466 Bacteria 2118
24 Ga0070684_100016540 3300005535 Bacteria 6030
25 Ga0068853_100091782 3300005539 Bacteria 2671
26 Ga0068853_100156859 3300005539 Bacteria 2051
27 Ga0070672_100092241 3300005543 Bacteria 2445
28 Ga0070665_100003028 3300005548 Bacteria 18124
29 Ga0070665_100087309 3300005548 Bacteria 3124
30 Ga0068855_100008936 3300005563 Bacteria 12112
31 Ga0068857_100192072 3300005577 Bacteria 1860
32 Ga0068856_100120962 3300005614 Bacteria 2619
33 Ga0068864_100088217 3300005618 Bacteria 2732
34 Ga0068851_10015545 3300005834 Bacteria 3627
35 Ga0068863_100122258 3300005841 Bacteria 2483
36 Ga0068858_100274493 3300005842 Bacteria 1604
37 Ga0068862_100025027 3300005844 Bacteria 5010
38 Ga0075364_10011025 3300006051 Bacteria 5483
39 Ga0070716_100001228 3300006173 Bacteria 11286
40 Ga0070712_100003368 3300006175 Bacteria 9826
41 Ga0075369_10003268 3300006186 Bacteria 5890
42 Ga0105245_10019187 3300009098 Bacteria 5988
43 Ga0105245_10099048 3300009098 Bacteria 2694
44 Ga0105243_10094861 3300009148 Bacteria 2465
45 Ga0105243_10207773 3300009148 Bacteria 1722
46 Ga0105241_10003631 3300009174 Bacteria 11466
47 Ga0105246_10030073 3300011119 Bacteria 3583
48 Ga0105246_10071289 3300011119 Bacteria 2446
49 Ga0157371_10004088 3300013102 Bacteria 12892
50 Ga0157370_10019785 3300013104 Bacteria 6738
51 Ga0157369_10045269 3300013105 Bacteria 4787
52 Ga0157374_10019475 3300013296 Bacteria 6007
53 Ga0157374_10089217 3300013296 Bacteria 2938
54 Ga0163163_10029193 3300014325 Bacteria 5304
55 Ga0157380_10033052 3300014326 Bacteria 3982
56 Ga0157377_10023138 3300014745 Bacteria 3290
57 Ga0209566_100065 3300025225 Bacteria 190999
58 Ga0209674_100001 3300025226 Bacteria 4013750
59 Ga0209563_100001 3300025230 Bacteria 4013775
60 Ga0209677_100001 3300025253 Bacteria 4013787
61 Ga0209129_1000130 3300025258 Bacteria 128065
62 Ga0209025_1000364 3300025294 Bacteria 96280
63 Ga0209051_1009048 3300025303 Bacteria 5184
64 Ga0207697_10019302 3300025315 Bacteria 2791
65 Ga0207655_1028759 3300025728 Bacteria 2615
66 Ga0207655_1050145 3300025728 Bacteria 1699
67 Ga0207688_10004582 3300025901 Bacteria 7524
68 Ga0207647_10030703 3300025904 Bacteria 3464
69 Ga0207643_10027980 3300025908 Bacteria 3128
70 Ga0207654_10010975 3300025911 Bacteria 4612
71 Ga0207695_10009837 3300025913 Bacteria 11751
72 Ga0207671_10001100 3300025914 Bacteria 32636
73 Ga0207693_10003296 3300025915 Bacteria 13826
74 Ga0207663_10091329 3300025916 Bacteria 2021
75 Ga0207657_10045262 3300025919 Bacteria 3864
76 Ga0207657_10048828 3300025919 Bacteria 3693
77 Ga0207694_10003625 3300025924 Bacteria 12224
78 Ga0207687_10080691 3300025927 Bacteria 2349
79 Ga0207687_10142305 3300025927 Bacteria 1821
80 Ga0207687_10177112 3300025927 Bacteria 1649
81 Ga0207700_10023703 3300025928 Bacteria 4239
82 Ga0207706_10035787 3300025933 Bacteria 4412
83 Ga0207706_10105674 3300025933 Bacteria 2477
84 Ga0207709_10012627 3300025935 Bacteria 4655
85 Ga0207704_10042145 3300025938 Bacteria 2684
86 Ga0207665_10003491 3300025939 Bacteria 10499
87 Ga0207691_10069433 3300025940 Bacteria 3182
88 Ga0207691_10070909 3300025940 Bacteria 3146
89 Ga0207689_10018454 3300025942 Bacteria 5887
90 Ga0207689_10212379 3300025942 Bacteria 1599
91 Ga0207667_10238779 3300025949 Bacteria 1860
92 Ga0207668_10003400 3300025972 Bacteria 9327
93 Ga0207677_10059197 3300026023 Bacteria 2641
94 Ga0207703_10073427 3300026035 Bacteria 2830
95 Ga0207703_10178790 3300026035 Bacteria 1871
96 Ga0207639_10132898 3300026041 Bacteria 2062
97 Ga0207639_10179581 3300026041 Bacteria 1799
98 Ga0207639_10218538 3300026041 Bacteria 1645
99 Ga0207678_10026312 3300026067 Bacteria 5076
100 Ga0207708_10027583 3300026075 Bacteria 4301
101 Ga0207702_10082731 3300026078 Bacteria 2792
102 Ga0207648_10059552 3300026089 Bacteria 3330
103 Ga0207648_10111931 3300026089 Bacteria 2397
104 Ga0207676_10025432 3300026095 Bacteria 4392
105 Ga0207676_10119407 3300026095 Bacteria 2220
106 Ga0207674_10093454 3300026116 Bacteria 2996
107 Ga0207675_100022126 3300026118 Bacteria 5919
108 Ga0207675_100145427 3300026118 Bacteria 2254
109 Ga0207675_100229970 3300026118 Bacteria 1789
110 Ga0268266_10017487 3300028379 Bacteria 6116
111 Ga0268265_10134637 3300028380 Bacteria 2059
112 Ga0268264_10199975 3300028381 Bacteria 1827
113 Ga0307408_100225288 3300031548 Bacteria 1532
114 Ga0307406_10094868 3300031901 Bacteria 2018
115 Ga0307412_10067056 3300031911 Bacteria 2435
116 Ga0373931_0007360 3300035691 Bacteria 5182
117 Ga0395898_0143082 3300037466 Bacteria 2289
118 Ga0395905_0016013 3300037471 Bacteria 7128
119 Ga0439461_0019701 3300041410 Bacteria 1331
120 Ga0439465_0004887 3300041413 Bacteria 4308
121 Ga0439449_0000504 3300042007 Bacteria 14650
122 Ga0439457_003096 3300042014 Bacteria 4599
123 Ga0466972_0059142 3300044658 Bacteria 1840
124 Ga0466965_0019564 3300044683 Bacteria 3251
125 Ga0466970_0000009 3300044765 Bacteria 99007
126 Ga0466970_0009867 3300044765 Bacteria 4835
127 Ga0466957_0120644 3300044842 Bacteria 1671
128 Ga0466958_0027641 3300045836 Bacteria 3358
129 Ga0466967_0117506 3300045976 Bacteria 2452
130 Ga0495651_0016267 3300046462 Bacteria 5760
131 Ga0495651_0086970 3300046462 Bacteria 2350
132 Ga0495618_0015978 3300046514 Bacteria 4585
133 Ga0495628_0026939 3300046516 Bacteria 4679
134 Ga0495628_0046022 3300046516 Bacteria 3467
135 Ga0495652_0014044 3300046529 Bacteria 7194
136 Ga0495665_0011693 3300046531 Bacteria 4755
137 Ga0495587_0048271 3300046536 Bacteria 2521
138 Ga0495645_0001087 3300046543 Bacteria 18392
139 Ga0495645_0012781 3300046543 Bacteria 5924
140 Ga0495622_0019499 3300046557 Bacteria 3157
141 Ga0495613_0003360 3300046689 Bacteria 11960
142 Ga0495600_0002261 3300046809 Bacteria 10973
143 Ga0495604_0005673 3300047317 Bacteria 9900
144 Ga0495604_0006872 3300047317 Bacteria 9022
145 Ga0495604_0048273 3300047317 Bacteria 3312
146 Ga0495680_0018779 3300047322 Bacteria 5859
147 Ga0495686_0009863 3300047472 Bacteria 6845
148 Ga0496100_0104981 3300048903 Bacteria 1953
149 Ga0496101_0040629 3300048904 Bacteria 3313
150 Ga0496102_0021429 3300048905 Bacteria 5715
151 Ga0496102_0087360 3300048905 Bacteria 2881
152 Ga0496103_0081124 3300048906 Bacteria 2040
153 Ga0496107_0024653 3300048910 Bacteria 4256
154 Ga0496108_0000811 3300048911 Bacteria 24279
155 Ga0496109_0010475 3300048912 Bacteria 7922
156 Ga0496109_0141682 3300048912 Bacteria 2248
157 Ga0496110_0026376 3300048913 Bacteria 4972
158 Ga0496110_0042071 3300048913 Bacteria 3988
159 Ga0496111_0040115 3300048914 Bacteria 3358
160 Ga0496112_0002260 3300048915 Bacteria 15393
161 Ga0496112_0020188 3300048915 Bacteria 6310
162 Ga0496112_0314563 3300048915 Bacteria 1511
163 Ga0496113_0046443 3300048916 Bacteria 3224
164 Ga0501031_0056807 3300049568 Bacteria 2550
165 Ga0501032_0000596 3300049569 Bacteria 29172
166 Ga0501032_0064151 3300049569 Bacteria 2459
167 Ga0501033_0003574 3300049570 Bacteria 12717
168 Ga0501034_0000190 3300049571 Bacteria 115701
169 Ga0501034_0094616 3300049571 Bacteria 2984
170 Ga0501036_0001492 3300049572 Bacteria 18029
171 Ga0501036_0017132 3300049572 Bacteria 6055
172 Ga0501038_0041751 3300049574 Bacteria 4000
173 Ga0501038_0118563 3300049574 Bacteria 2185
174 Ga0501042_0025739 3300049578 Bacteria 4134
175 Ga0501047_0075642 3300049581 Bacteria 3240
176 Ga0501048_0055075 3300049582 Bacteria 2824
177 Ga0501072_0012101 3300049588 Bacteria 6592
178 Ga0501076_0142973 3300049592 Bacteria 1944
179 Ga0501077_0025038 3300049593 Bacteria 3790
180 Ga0501083_0062506 3300049744 Bacteria 2484
181 Ga0501035_0150220 3300049822 Bacteria 2022
182 Ga0501045_0095076 3300049824 Bacteria 2204
183 nmdc:mga08y16_108640_c1 3300050511 Bacteria 2888
184 nmdc:mga0sz30_4453_c1 3300050516 Bacteria 5062
185 Ga0500643_004910 3300053087 Bacteria 5889
186 Ga0501084_0039462 3300054114 Bacteria 3949

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048915 Ga0496112_0314563 Ga0496112_0314563_16_1068 340
2 3300013102 Ga0157371_10004088 Ga0157371_1000408813 344
3 3300049571 Ga0501034_0000190 Ga0501034_0000190_27482_28564 345
4 3300046543 Ga0495645_0012781 Ga0495645_0012781_3420_4673 373
5 3300045836 Ga0466958_0027641 Ga0466958_0027641_896_2140 386
6 3300005367 Ga0070667_100029624 Ga0070667_1000296242 387
7 3300003752 Ga0055539_1000005 Ga0055539_1000005191 394
8 3300003756 Ga0055533_1000001 Ga0055533_10000011260 394
9 3300003759 Ga0055525_1000380 Ga0055525_100038025 394
10 3300003841 Ga0055541_1000669 Ga0055541_10006692 394
11 3300025225 Ga0209566_100065 Ga0209566_100065157 394
12 3300025226 Ga0209674_100001 Ga0209674_1000011259 394
13 3300025230 Ga0209563_100001 Ga0209563_1000011259 394
14 3300025253 Ga0209677_100001 Ga0209677_1000011259 394
15 3300044765 Ga0466970_0009867 Ga0466970_0009867_1436_2710 396
16 iso_pu_bacteria 8055172936 8055176467 399
17 3300005577 Ga0068857_100192072 Ga0068857_1001920722 400
18 3300026116 Ga0207674_10093454 Ga0207674_100934543 400
19 iso_pu_bacteria 3002998708 3003002338 401
20 3300050511 nmdc:mga08y16_108640_c1 nmdc:mga08y16_108640_c1_1377_2651 402
21 3300005334 Ga0068869_100033047 Ga0068869_1000330472 405
22 3300005337 Ga0070682_100049052 Ga0070682_1000490522 405
23 3300005339 Ga0070660_100202866 Ga0070660_1002028662 405
24 3300005365 Ga0070688_100036489 Ga0070688_1000364892 405
25 3300005366 Ga0070659_100107432 Ga0070659_1001074322 405
26 3300005455 Ga0070663_100059278 Ga0070663_1000592782 405
27 3300005535 Ga0070684_100016540 Ga0070684_1000165403 405
28 3300005548 Ga0070665_100087309 Ga0070665_1000873092 405
29 3300005614 Ga0068856_100120962 Ga0068856_1001209622 405
30 3300005842 Ga0068858_100274493 Ga0068858_1002744931 405
31 3300005844 Ga0068862_100025027 Ga0068862_1000250275 405
32 3300009098 Ga0105245_10019187 Ga0105245_100191876 405
33 3300025927 Ga0207687_10142305 Ga0207687_101423052 405
34 3300025933 Ga0207706_10105674 Ga0207706_101056742 405
35 3300025942 Ga0207689_10212379 Ga0207689_102123791 405
36 3300025972 Ga0207668_10003400 Ga0207668_100034007 405
37 3300026035 Ga0207703_10178790 Ga0207703_101787902 405
38 3300026067 Ga0207678_10026312 Ga0207678_100263125 405
39 3300026078 Ga0207702_10082731 Ga0207702_100827312 405
40 3300026095 Ga0207676_10025432 Ga0207676_100254324 405
41 3300028380 Ga0268265_10134637 Ga0268265_101346372 405
42 3300048912 Ga0496109_0141682 Ga0496109_0141682_568_1866 405
43 iso_pu_bacteria 2946033335 2946035541 405
44 3300046531 Ga0495665_0011693 Ga0495665_0011693_206_1525 407
45 3300049570 Ga0501033_0003574 Ga0501033_0003574_4164_5495 407
46 3300049572 Ga0501036_0017132 Ga0501036_0017132_1144_2475 407
47 3300049574 Ga0501038_0118563 Ga0501038_0118563_777_2108 407
48 3300009098 Ga0105245_10099048 Ga0105245_100990482 409
49 3300014745 Ga0157377_10023138 Ga0157377_100231382 409
50 3300025908 Ga0207643_10027980 Ga0207643_100279801 409
51 3300025927 Ga0207687_10177112 Ga0207687_101771121 409
52 3300026095 Ga0207676_10119407 Ga0207676_101194072 409
53 3300044658 Ga0466972_0059142 Ga0466972_0059142_123_1379 409
54 3300044683 Ga0466965_0019564 Ga0466965_0019564_1670_2926 409
55 3300048913 Ga0496110_0042071 Ga0496110_0042071_66_1367 409
56 iso_pu_bacteria 2974315732 2974316465 409
57 iso_pu_bacteria 2984523437 2984524646 409
58 iso_pu_bacteria 8055066027 8055071061 409
59 iso_pu_bacteria 2738543034 2739365374 410
60 iso_pu_bacteria 2873314349 2873321737 410
61 iso_pu_bacteria 2852646457 2852647983 411
62 3300005834 Ga0068851_10015545 Ga0068851_100155452 412
63 3300025919 Ga0207657_10045262 Ga0207657_100452622 412
64 3300026041 Ga0207639_10179581 Ga0207639_101795811 412
65 3300005339 Ga0070660_100090715 Ga0070660_1000907152 413
66 3300005459 Ga0068867_100122720 Ga0068867_1001227202 413
67 3300009148 Ga0105243_10207773 Ga0105243_102077731 413
68 3300025928 Ga0207700_10023703 Ga0207700_100237033 413
69 3300026089 Ga0207648_10111931 Ga0207648_101119312 413
70 3300006051 Ga0075364_10011025 Ga0075364_100110252 414
71 3300049574 Ga0501038_0041751 Ga0501038_0041751_130_1443 414
72 iso_pu_bacteria 2808606371 2808896245 414
73 iso_pu_bacteria 8004021418 8004021958 414
74 iso_pu_bacteria 8004025490 8004028724 414
75 3300041410 Ga0439461_0019701 Ga0439461_0019701_25_1302 415
76 3300041413 Ga0439465_0004887 Ga0439465_0004887_2439_3716 415
77 iso_pu_bacteria 2945968032 2945969230 416
78 iso_pu_bacteria 2643221692 2644518161 417
79 3300005539 Ga0068853_100156859 Ga0068853_1001568591 418
80 3300013105 Ga0157369_10045269 Ga0157369_100452692 418
81 3300026041 Ga0207639_10132898 Ga0207639_101328982 418
82 3300037466 Ga0395898_0143082 Ga0395898_0143082_726_2021 418
83 3300037471 Ga0395905_0016013 Ga0395905_0016013_877_2172 418
84 3300044765 Ga0466970_0000009 Ga0466970_0000009_80602_81936 418
85 3300044842 Ga0466957_0120644 Ga0466957_0120644_127_1461 418
86 3300047472 Ga0495686_0009863 Ga0495686_0009863_658_1959 418
87 3300013104 Ga0157370_10019785 Ga0157370_100197852 419
88 3300025914 Ga0207671_10001100 Ga0207671_1000110031 419
89 3300026118 Ga0207675_100229970 Ga0207675_1002299701 421
90 3300005347 Ga0070668_100059480 Ga0070668_1000594803 422
91 3300005437 Ga0070710_10000779 Ga0070710_100007796 422
92 3300005439 Ga0070711_100003202 Ga0070711_1000032027 422
93 3300005440 Ga0070705_100022673 Ga0070705_1000226732 422
94 3300005539 Ga0068853_100091782 Ga0068853_1000917823 422
95 3300005548 Ga0070665_100003028 Ga0070665_10000302814 422
96 3300005618 Ga0068864_100088217 Ga0068864_1000882172 422
97 3300005841 Ga0068863_100122258 Ga0068863_1001222582 422
98 3300006173 Ga0070716_100001228 Ga0070716_1000012285 422
99 3300006175 Ga0070712_100003368 Ga0070712_1000033688 422
100 3300013296 Ga0157374_10089217 Ga0157374_100892172 422
101 3300014326 Ga0157380_10033052 Ga0157380_100330522 422
102 3300025901 Ga0207688_10004582 Ga0207688_100045822 422
103 3300025904 Ga0207647_10030703 Ga0207647_100307032 422
104 3300025915 Ga0207693_10003296 Ga0207693_100032966 422
105 3300025916 Ga0207663_10091329 Ga0207663_100913292 422
106 3300025919 Ga0207657_10048828 Ga0207657_100488281 422
107 3300025927 Ga0207687_10080691 Ga0207687_100806912 422
108 3300025933 Ga0207706_10035787 Ga0207706_100357872 422
109 3300025938 Ga0207704_10042145 Ga0207704_100421452 422
110 3300025939 Ga0207665_10003491 Ga0207665_1000349111 422
111 3300025940 Ga0207691_10070909 Ga0207691_100709092 422
112 3300025942 Ga0207689_10018454 Ga0207689_100184543 422
113 3300026023 Ga0207677_10059197 Ga0207677_100591972 422
114 3300026035 Ga0207703_10073427 Ga0207703_100734272 422
115 3300026075 Ga0207708_10027583 Ga0207708_100275832 422
116 3300026089 Ga0207648_10059552 Ga0207648_100595522 422
117 3300026118 Ga0207675_100022126 Ga0207675_1000221262 422
118 3300026118 Ga0207675_100145427 Ga0207675_1001454272 422
119 3300028379 Ga0268266_10017487 Ga0268266_100174873 422
120 3300028381 Ga0268264_10199975 Ga0268264_101999752 422
121 3300035691 Ga0373931_0007360 Ga0373931_0007360_725_2023 422
122 3300048905 Ga0496102_0087360 Ga0496102_0087360_860_2170 422
123 3300048910 Ga0496107_0024653 Ga0496107_0024653_544_1842 422
124 3300048915 Ga0496112_0020188 Ga0496112_0020188_1423_2721 422
125 3300031901 Ga0307406_10094868 Ga0307406_100948682 423
126 3300046462 Ga0495651_0086970 Ga0495651_0086970_868_2208 423
127 3300046516 Ga0495628_0026939 Ga0495628_0026939_1714_3054 423
128 3300046529 Ga0495652_0014044 Ga0495652_0014044_3926_5266 423
129 3300046536 Ga0495587_0048271 Ga0495587_0048271_426_1766 423
130 3300046543 Ga0495645_0001087 Ga0495645_0001087_9453_10793 423
131 3300046809 Ga0495600_0002261 Ga0495600_0002261_6080_7420 423
132 3300047317 Ga0495604_0006872 Ga0495604_0006872_7069_8409 423
133 3300006186 Ga0075369_10003268 Ga0075369_100032682 424
134 3300046462 Ga0495651_0016267 Ga0495651_0016267_786_2093 424
135 3300046514 Ga0495618_0015978 Ga0495618_0015978_2174_3481 424
136 3300046516 Ga0495628_0046022 Ga0495628_0046022_915_2222 424
137 3300046557 Ga0495622_0019499 Ga0495622_0019499_1590_2918 424
138 3300046689 Ga0495613_0003360 Ga0495613_0003360_1007_2314 424
139 3300047317 Ga0495604_0005673 Ga0495604_0005673_6139_7446 424
140 3300047317 Ga0495604_0048273 Ga0495604_0048273_1252_2559 424
141 3300047322 Ga0495680_0018779 Ga0495680_0018779_884_2191 424
142 3300048915 Ga0496112_0002260 Ga0496112_0002260_11776_13053 424
143 3300050516 nmdc:mga0sz30_4453_c1 nmdc:mga0sz30_4453_c1_3653_4978 424
144 3300053087 Ga0500643_004910 Ga0500643_004910_4215_5528 425
145 3300005563 Ga0068855_100008936 Ga0068855_1000089368 426
146 3300009174 Ga0105241_10003631 Ga0105241_100036315 426
147 3300013296 Ga0157374_10019475 Ga0157374_100194757 426
148 3300025911 Ga0207654_10010975 Ga0207654_100109752 426
149 3300025913 Ga0207695_10009837 Ga0207695_100098375 426
150 3300025924 Ga0207694_10003625 Ga0207694_100036256 426
151 3300025949 Ga0207667_10238779 Ga0207667_102387791 426
152 3300026041 Ga0207639_10218538 Ga0207639_102185382 426
153 3300003322 rootL2_10100046 rootL2_101000463 427
154 3300048903 Ga0496100_0104981 Ga0496100_0104981_178_1491 427
155 3300048904 Ga0496101_0040629 Ga0496101_0040629_1232_2545 427
156 3300048905 Ga0496102_0021429 Ga0496102_0021429_3430_4743 427
157 3300049571 Ga0501034_0094616 Ga0501034_0094616_882_2219 427
158 3300049581 Ga0501047_0075642 Ga0501047_0075642_1495_2832 427
159 iso_pu_bacteria 2919034639 2919036820 427
160 iso_pu_bacteria 2946024296 2946025946 427
161 3300045976 Ga0466967_0117506 Ga0466967_0117506_720_2036 429
162 3300049569 Ga0501032_0000596 Ga0501032_0000596_314_1666 429
163 3300049744 Ga0501083_0062506 Ga0501083_0062506_253_1608 429
164 iso_pu_bacteria 2904497146 2904498859 429
165 iso_pu_bacteria 2904776348 2904780200 429
166 3300005338 Ga0068868_100011819 Ga0068868_1000118192 430
167 3300005365 Ga0070688_100079485 Ga0070688_1000794852 430
168 3300005367 Ga0070667_100073359 Ga0070667_1000733592 430
169 3300005466 Ga0070685_10066982 Ga0070685_100669822 430
170 3300009148 Ga0105243_10094861 Ga0105243_100948612 430
171 3300011119 Ga0105246_10030073 Ga0105246_100300733 430
172 3300014325 Ga0163163_10029193 Ga0163163_100291933 430
173 3300048906 Ga0496103_0081124 Ga0496103_0081124_663_1985 430
174 3300048911 Ga0496108_0000811 Ga0496108_0000811_10333_11655 430
175 3300048912 Ga0496109_0010475 Ga0496109_0010475_4072_5394 430
176 3300048913 Ga0496110_0026376 Ga0496110_0026376_1555_2877 430
177 3300048914 Ga0496111_0040115 Ga0496111_0040115_730_2052 430
178 3300048916 Ga0496113_0046443 Ga0496113_0046443_394_1716 430
179 iso_pu_bacteria 2857740372 2857744112 430
180 iso_pu_bacteria 2919059106 2919061197 430
181 iso_pu_bacteria 2933418574 2933420406 430
182 iso_pu_bacteria 2939647034 2939649752 430
183 iso_pu_bacteria 2919538618 2919541586 431
184 iso_pu_bacteria 2945956166 2945958903 432
185 3300005543 Ga0070672_100092241 Ga0070672_1000922412 433
186 3300025728 Ga0207655_1028759 Ga0207655_10287592 433
187 3300025940 Ga0207691_10069433 Ga0207691_100694333 433
188 3300042007 Ga0439449_0000504 Ga0439449_0000504_3258_4673 433
189 3300042014 Ga0439457_003096 Ga0439457_003096_1337_2752 433
190 3300025728 Ga0207655_1050145 Ga0207655_10501451 434
191 3300031548 Ga0307408_100225288 Ga0307408_1002252881 434
192 3300049568 Ga0501031_0056807 Ga0501031_0056807_1005_2360 434
193 3300049569 Ga0501032_0064151 Ga0501032_0064151_1029_2384 434
194 3300049572 Ga0501036_0001492 Ga0501036_0001492_563_1918 434
195 3300049578 Ga0501042_0025739 Ga0501042_0025739_2122_3477 434
196 3300049582 Ga0501048_0055075 Ga0501048_0055075_65_1420 434
197 3300049588 Ga0501072_0012101 Ga0501072_0012101_4299_5654 434
198 3300049592 Ga0501076_0142973 Ga0501076_0142973_132_1487 434
199 3300049593 Ga0501077_0025038 Ga0501077_0025038_303_1658 434
200 3300049822 Ga0501035_0150220 Ga0501035_0150220_560_1915 434
201 3300049824 Ga0501045_0095076 Ga0501045_0095076_32_1387 434
202 3300054114 Ga0501084_0039462 Ga0501084_0039462_1657_3012 434
203 3300031911 Ga0307412_10067056 Ga0307412_100670562 436
204 iso_pu_bacteria 2844849076 2844850766 436
205 3300002773 JGI25152J39213_1000233 JGI25152J39213_100023318 444
206 3300011119 Ga0105246_10071289 Ga0105246_100712892 444
207 3300025258 Ga0209129_1000130 Ga0209129_1000130108 444
208 3300025294 Ga0209025_1000364 Ga0209025_100036418 444
209 3300025303 Ga0209051_1009048 Ga0209051_10090483 444
210 3300025315 Ga0207697_10019302 Ga0207697_100193022 444
211 3300025935 Ga0207709_10012627 Ga0207709_100126274 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14031

D-ser_dehydrat

Putative serine dehydratase domain

344

442

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4v15-assembly1.cif.gz_B crystal structure of d-threonine aldolase from alcaligenes xylosoxidans 0.8767 49 442
3gwq-assembly1.cif.gz_A crystal structure of a putative d-serine deaminase (bxe_a4060) from burkholderia xenovorans lb400 at 2.00 a resolution 0.8712 25 444
3gwq-assembly1.cif.gz_A crystal structure of a putative d-serine deaminase (bxe_a4060) from burkholderia xenovorans lb400 at 2.00 a resolution 0.8672 25 444
7dib-assembly1.cif.gz_B crystal structure of d-threonine aldolase from filomicrobium marinum 0.8637 49 442
7dib-assembly1.cif.gz_A crystal structure of d-threonine aldolase from filomicrobium marinum 0.8632 52 442
ID Description Score Start End Superfamily
3gwqB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8843 66 306 3.20.20.10
3gwqB01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;D-serine dehydratase-like domain 0.8816 330 444 2.40.37.20
4v15B01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;D-serine dehydratase-like domain 0.8733 322 441 2.40.37.20
3gwqB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8591 66 306 3.20.20.10
4v15B02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8309 65 307 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A3D0VC15-F1-model_v4 Amino acid deaminase 0.9876 8 270
AF-A0A6B3AZ32-F1-model_v4 Amino acid deaminase 0.9733 14 216
AF-A0A066YUG3-F1-model_v4 Alanine racemase 0.9731 8 175
AF-A0A3D0ZGY1-F1-model_v4 Amino acid deaminase 0.9727 174 259
AF-I7G3L7-F1-model_v4 Amino acid aldolase or racemase-like protein (D-serine dehydratase) (EC 4.3.1.18) 0.9676 19 444 GO:0008721

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pLDDT pTM Quality
91 0.89 High
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Predicted Structure (AlphaFold2)

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