F320360

General Info

Members Datasets Scaffolds Average Seq Length
210 121 206 914

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10003688|Ga0157372_100036887
Length 957
Sequence MMALLNNRCAGNARFKKVAHFRQTANVCPSDKMPPASFKGWLLACLLLTGILVRAQEPAGKPVTIHLTQTRYAGFLKELEKQSGFRIYYDTADLDTTRIDINVDQAPLTRVLDQAFSGTGMSYSIDRYRHVFVAKGEAIRTDLPADYFERHSDKDAVAGGDSVRDYLAEAGTPQVATLENKLYVIGDKGSPTPNRVANVAGYARDAKTGEPIVGASIYVENPRIGVASDQYGYFSISLPKGRHILNIQSIGMRDTRRLLMVYGDGKLNIDLQTQIITLKKVIVSAEKASNVRRTEMGVQKLDIKTIKQVPVVFGEADVLRVITTLPGVKTVGEASTGLNVRGGSADQNLILFNDATIYNTAHFFGMFSAFNPEVVKDVELYKSSIPAKFGGRLSSVVDISSREGNKKDFAGSAGIGLLTSRLNLEGPLVKDKTSFIIGGRTTYANWLLNALPDQYKHSRASFYDANLNISHQMGKKDNLYLTGYISQDHFNLNNDTTYGYGNRNIGLKWKHIYNNRLFHLISTGYDRYQYSIWSQDNPVNAYKLGFDINQLYFRTHFNYFVSSSHTLEFGVSTLKYTLHPGEYTPRGKGSLVQGDTLAKEQALESGAYLSDRYTISNSISLEAGVRYSLYNYLGPATVNTYAPGQPITLDNQTGSVSYPSGKFIKTYGGPEFRLSTRVVLTDNMSIKAGYNTQRQYIHMLSNTTAMAPTDIWKLSDPNIRPQYGDQVSLGLYRNFKNNTIETSLEVYYKHIKDYLDYKSGAMLVMNHHIETDVLETKGKAYGVELLIKKLTGKFNGWLSYTYSRILLRQDDPNAGELVNGGQFYPANYDKPHDVTLVSNYRITHRVSWSFNATYSTGRPITLPIGVFQYAGSLRTLYADRNAYRIPDYFRADISLNVLGNHKVYQKFHNSWTFGVYNLTGRHNPYSVYYTSENGAVNGYKLSIFGSAIPYVNYNIAF

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2738543023 Pedobacter sp. OK628 Isolate Unclassified
4 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
5 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
6 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
7 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
8 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
9 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
103 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
118 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
119 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
120 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.67
Metatranscriptomes 0
Isolates 3.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.43
Nodule 0
Rhizoplane 0.48
Rhizosphere 88.57
Stem 0
Stem Tuber 0
Unclassified 9.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000044 3300001990 Bacteria 35793
2 JGI24735J21928_10000005 3300002067 Bacteria 356755
3 rootH1_10004416 3300003316 Bacteria 3807
4 rootH1_10004416 3300003323 Bacteria 4902
5 rootH1_10184069 3300003316 Bacteria 4017
6 rootH1_10184069 3300003323 Bacteria 2243
7 rootH2_10000355 3300003320 Bacteria 55375
8 rootH2_10001886 3300003320 Bacteria 115156
9 rootH2_10002197 3300003320 Bacteria 14946
10 rootH2_10035550 3300003320 Bacteria 5766
11 rootL2_10000249 3300003322 Bacteria 16642
12 rootL2_10001589 3300003322 Bacteria 6725
13 rootH1_10012052 3300003316 Bacteria 7951
14 rootH1_10012052 3300003323 Bacteria 55556
15 rootH1_10016264 3300003323 Bacteria 11614
16 rootH1_10024956 3300003323 Bacteria 26839
17 Ga0070658_10001820 3300005327 Bacteria 17939
18 Ga0070658_10006334 3300005327 Bacteria 9590
19 Ga0070676_10000272 3300005328 Bacteria 22766
20 Ga0070666_10000247 3300005335 Bacteria 36276
21 Ga0070666_10001259 3300005335 Bacteria 15315
22 Ga0070680_100000819 3300005336 Bacteria 21946
23 Ga0068868_100000779 3300005338 Bacteria 21565
24 Ga0070691_10001460 3300005341 Bacteria 10130
25 Ga0070668_100000407 3300005347 Bacteria 28520
26 Ga0070673_100001651 3300005364 Bacteria 13227
27 Ga0070667_100002037 3300005367 Bacteria 17914
28 Ga0070662_100011710 3300005457 Bacteria 5789
29 Ga0070681_10001439 3300005458 Bacteria 20958
30 Ga0068867_100002845 3300005459 Bacteria 12167
31 Ga0070679_100001817 3300005530 Bacteria 19247
32 Ga0068853_100004370 3300005539 Bacteria 10936
33 Ga0068853_100016288 3300005539 Bacteria 6116
34 Ga0070672_100001007 3300005543 Bacteria 17083
35 Ga0070665_100000066 3300005548 Bacteria 212791
36 Ga0070665_100005599 3300005548 Bacteria 12915
37 Ga0068855_100000231 3300005563 Bacteria 71276
38 Ga0068855_100000284 3300005563 Bacteria 62592
39 Ga0068855_100013616 3300005563 Bacteria 9808
40 Ga0068855_100034798 3300005563 Bacteria 6004
41 Ga0068855_100038277 3300005563 Bacteria 5699
42 Ga0068857_100000234 3300005577 Bacteria 37184
43 Ga0068857_100007523 3300005577 Bacteria 9373
44 Ga0068856_100049195 3300005614 Bacteria 4155
45 Ga0068856_100060693 3300005614 Bacteria 3736
46 Ga0068852_100000661 3300005616 Bacteria 22523
47 Ga0068852_100006118 3300005616 Bacteria 8678
48 Ga0068859_100000338 3300005617 Bacteria 46830
49 Ga0068864_100001705 3300005618 Bacteria 18058
50 Ga0068864_100002408 3300005618 Bacteria 15449
51 Ga0068866_10003651 3300005718 Bacteria 6301
52 Ga0068851_10000791 3300005834 Bacteria 13629
53 Ga0068863_100001444 3300005841 Bacteria 23583
54 Ga0068863_100002544 3300005841 Bacteria 18095
55 Ga0068858_100000891 3300005842 Bacteria 30978
56 Ga0068860_100000041 3300005843 Bacteria 227790
57 Ga0068860_100001176 3300005843 Bacteria 28644
58 Ga0068860_100001667 3300005843 Bacteria 23752
59 Ga0068860_100002303 3300005843 Bacteria 20070
60 Ga0068860_100008100 3300005843 Bacteria 10466
61 Ga0081540_1005738 3300005983 Bacteria 9201
62 Ga0081539_10000418 3300005985 Bacteria 90493
63 Ga0068871_100004356 3300006358 Bacteria 9839
64 Ga0068865_100006237 3300006881 Bacteria 7263
65 Ga0068865_100018699 3300006881 Unclassified 4475
66 Ga0097620_100000338 3300006931 Bacteria 46830
67 Ga0105240_10000846 3300009093 Bacteria 55115
68 Ga0105240_10001547 3300009093 Bacteria 39045
69 Ga0105240_10004596 3300009093 Bacteria 20919
70 Ga0105240_10004962 3300009093 Bacteria 20004
71 Ga0105240_10042323 3300009093 Bacteria 5805
72 Ga0105240_10044750 3300009093 Bacteria 5621
73 Ga0105245_10009876 3300009098 Bacteria 8311
74 Ga0105241_10000777 3300009174 Bacteria 24263
75 Ga0105241_10006659 3300009174 Bacteria 8501
76 Ga0105241_10013362 3300009174 Bacteria 6019
77 Ga0105242_10009220 3300009176 Bacteria 7572
78 Ga0105237_10002278 3300009545 Bacteria 23884
79 Ga0105237_10003018 3300009545 Bacteria 20308
80 Ga0105237_10005485 3300009545 Bacteria 14299
81 Ga0105237_10010186 3300009545 Bacteria 10017
82 Ga0105237_10021668 3300009545 Bacteria 6606
83 Ga0105237_10033878 3300009545 Bacteria 5174
84 Ga0105238_10031989 3300009551 Bacteria 5354
85 Ga0105249_10001645 3300009553 Bacteria 19588
86 Ga0105249_10045214 3300009553 Bacteria 4004
87 Ga0105239_10000126 3300010375 Bacteria 107921
88 Ga0105239_10000128 3300010375 Bacteria 107095
89 Ga0105239_10000343 3300010375 Bacteria 67956
90 Ga0105239_10000596 3300010375 Bacteria 51547
91 Ga0105239_10000779 3300010375 Bacteria 45211
92 Ga0105239_10003525 3300010375 Bacteria 19164
93 Ga0105239_10017046 3300010375 Bacteria 8030
94 Ga0105239_10025624 3300010375 Bacteria 6494
95 Ga0105239_10031323 3300010375 Bacteria 5850
96 Ga0157370_10002183 3300013104 Bacteria 23875
97 Ga0157369_10026930 3300013105 Bacteria 6376
98 Ga0157374_10000001 3300013296 Bacteria 1077351
99 Ga0157374_10000002 3300013296 Bacteria 1054226
100 Ga0157374_10002032 3300013296 Bacteria 16991
101 Ga0163162_10000275 3300013306 Bacteria 46947
102 Ga0163162_10000404 3300013306 Bacteria 39585
103 Ga0163162_10001121 3300013306 Bacteria 24914
104 Ga0163162_10006415 3300013306 Bacteria 11392
105 Ga0163162_10026751 3300013306 Bacteria 5704
106 Ga0163162_10028641 3300013306 Bacteria 5513
107 Ga0163162_10056351 3300013306 Bacteria 3958
108 Ga0157372_10000329 3300013307 Bacteria 51970
109 Ga0157372_10000406 3300013307 Bacteria 47333
110 Ga0157372_10003688 3300013307 Bacteria 16455
111 Ga0157372_10004248 3300013307 Bacteria 15317
112 Ga0157372_10006312 3300013307 Bacteria 12607
113 Ga0157372_10014134 3300013307 Bacteria 8529
114 Ga0157372_10064524 3300013307 Bacteria 4108
115 Ga0157375_10000295 3300013308 Bacteria 45219
116 Ga0163163_10001212 3300014325 Bacteria 21813
117 Ga0157379_10001715 3300014968 Bacteria 18145
118 Ga0157379_10005085 3300014968 Bacteria 11278
119 Ga0157376_10001094 3300014969 Bacteria 17772
120 Ga0157376_10001183 3300014969 Bacteria 17203
121 Ga0157376_10003022 3300014969 Bacteria 11540
122 Ga0213876_10002769 3300021384 Bacteria 10215
123 Ga0207426_1000089 3300025302 Bacteria 281224
124 Ga0207656_10002275 3300025321 Bacteria 6436
125 Ga0207680_10000031 3300025903 Bacteria 77871
126 Ga0207680_10003816 3300025903 Bacteria 7095
127 Ga0207647_10012555 3300025904 Bacteria 5892
128 Ga0207647_10014386 3300025904 Bacteria 5455
129 Ga0207647_10019229 3300025904 Unclassified 4597
130 Ga0207645_10002857 3300025907 Bacteria 13388
131 Ga0207705_10004320 3300025909 Bacteria 10751
132 Ga0207654_10000979 3300025911 Bacteria 15682
133 Ga0207654_10017165 3300025911 Unclassified 3781
134 Ga0207707_10000785 3300025912 Bacteria 31123
135 Ga0207707_10081482 3300025912 Bacteria 2825
136 Ga0207695_10000073 3300025913 Bacteria 312565
137 Ga0207695_10000687 3300025913 Bacteria 66305
138 Ga0207695_10007884 3300025913 Bacteria 13438
139 Ga0207695_10010857 3300025913 Bacteria 11092
140 Ga0207695_10031628 3300025913 Bacteria 5800
141 Ga0207695_10045020 3300025913 Unclassified 4689
142 Ga0207671_10000981 3300025914 Bacteria 35291
143 Ga0207671_10006363 3300025914 Bacteria 10529
144 Ga0207652_10001257 3300025921 Bacteria 22555
145 Ga0207706_10027291 3300025933 Bacteria 5106
146 Ga0207686_10027456 3300025934 Unclassified 3334
147 Ga0207704_10010680 3300025938 Unclassified 4488
148 Ga0207691_10000372 3300025940 Bacteria 45068
149 Ga0207667_10000151 3300025949 Bacteria 104054
150 Ga0207667_10001533 3300025949 Bacteria 29042
151 Ga0207667_10007797 3300025949 Bacteria 12796
152 Ga0207667_10031747 3300025949 Bacteria 5699
153 Ga0207651_10000753 3300025960 Bacteria 13898
154 Ga0207712_10026364 3300025961 Bacteria 3871
155 Ga0207668_10000309 3300025972 Bacteria 31969
156 Ga0207658_10001348 3300025986 Bacteria 19218
157 Ga0207658_10012474 3300025986 Bacteria 5807
158 Ga0207677_10003184 3300026023 Bacteria 8663
159 Ga0207639_10001813 3300026041 Bacteria 14365
160 Ga0207641_10001017 3300026088 Bacteria 28513
161 Ga0207648_10000906 3300026089 Bacteria 33383
162 Ga0207648_10008447 3300026089 Bacteria 9971
163 Ga0207676_10002209 3300026095 Bacteria 14041
164 Ga0207676_10009688 3300026095 Bacteria 6849
165 Ga0207674_10000935 3300026116 Bacteria 38035
166 Ga0207698_10009116 3300026142 Bacteria 6305
167 Ga0268266_10000010 3300028379 Bacteria 1030233
168 Ga0268264_10000252 3300028381 Bacteria 99533
169 Ga0268264_10001915 3300028381 Bacteria 18805
170 Ga0268264_10002552 3300028381 Bacteria 15974
171 Ga0268264_10004965 3300028381 Bacteria 11270
172 Ga0268264_10027058 3300028381 Bacteria 4685
173 Ga0307515_10000076 3300028794 Bacteria 228736
174 Ga0307511_10000285 3300030521 Bacteria 53256
175 Ga0265327_10006088 3300031251 Bacteria 9783
176 Ga0307509_10070612 3300031507 Bacteria 3646
177 Ga0307408_100002333 3300031548 Bacteria 13440
178 Ga0307408_100010890 3300031548 Bacteria 6002
179 Ga0307408_100033129 3300031548 Bacteria 3607
180 Ga0316584_0001915 3300036712 Bacteria 12953
181 Ga0436365_1874674 3300039437 Bacteria 58580
182 Ga0439457_001084 3300042014 Bacteria 8226
183 Ga0466972_0000047 3300044658 Bacteria 122901
184 Ga0466957_0000205 3300044842 Bacteria 27570
185 Ga0466959_0014635 3300045049 Bacteria 5707
186 Ga0495650_0000050 3300046471 Bacteria 318894
187 Ga0495585_0000248 3300046492 Bacteria 56018
188 Ga0495606_0000581 3300046507 Bacteria 58129
189 Ga0495616_0000271 3300046513 Bacteria 42005
190 Ga0495648_0005326 3300046524 Bacteria 10725
191 Ga0495611_0000322 3300046648 Bacteria 31982
192 Ga0495625_0000105 3300046660 Bacteria 126078
193 Ga0495649_0000011 3300046694 Bacteria 416695
194 Ga0495687_000035 3300047443 Bacteria 255949
195 Ga0495686_0000039 3300047472 Bacteria 304821
196 Ga0495686_0000061 3300047472 Bacteria 236734
197 Ga0495686_0001920 3300047472 Bacteria 20737
198 Ga0495686_0004769 3300047472 Bacteria 10970
199 Ga0501046_0047815 3300049580 Bacteria 3391
200 Ga0501047_0031195 3300049581 Bacteria 5141
201 Ga0501070_0009727 3300049586 Bacteria 8129
202 Ga0501236_000344 3300049670 Bacteria 5068
203 Ga0501225_0000493 3300049705 Bacteria 12299
204 Ga0500583_0000003 3300053092 Bacteria 229587
205 Ga0500622_0003249 3300053156 Bacteria 11039
206 Ga0501084_0005613 3300054114 Bacteria 10303

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009545 Ga0105237_10002278 Ga0105237_100022787 719
2 3300025912 Ga0207707_10081482 Ga0207707_100814821 748
3 3300010375 Ga0105239_10017046 Ga0105239_100170465 785
4 3300028381 Ga0268264_10004965 Ga0268264_1000496510 794
5 3300003322 rootL2_10001589 rootL2_100015896 807
6 iso_pu_bacteria 2738543023 2739302358 817
7 3300006358 Ga0068871_100004356 Ga0068871_1000043562 829
8 3300014969 Ga0157376_10003022 Ga0157376_100030224 853
9 3300005563 Ga0068855_100000284 Ga0068855_10000028445 861
10 3300025949 Ga0207667_10007797 Ga0207667_100077974 861
11 3300053092 Ga0500583_0000003 Ga0500583_0000003_64001_66769 862
12 3300028794 Ga0307515_10000076 Ga0307515_10000076126 865
13 3300005335 Ga0070666_10000247 Ga0070666_1000024723 872
14 3300005616 Ga0068852_100006118 Ga0068852_1000061183 872
15 3300005617 Ga0068859_100000338 Ga0068859_10000033814 872
16 3300005618 Ga0068864_100002408 Ga0068864_1000024084 872
17 3300005841 Ga0068863_100001444 Ga0068863_1000014443 872
18 3300005843 Ga0068860_100008100 Ga0068860_1000081003 872
19 3300006931 Ga0097620_100000338 Ga0097620_10000033822 872
20 3300009545 Ga0105237_10005485 Ga0105237_1000548510 872
21 3300013306 Ga0163162_10006415 Ga0163162_100064154 872
22 3300014968 Ga0157379_10005085 Ga0157379_100050854 872
23 3300025903 Ga0207680_10000031 Ga0207680_1000003167 872
24 3300025914 Ga0207671_10000981 Ga0207671_1000098122 872
25 3300025961 Ga0207712_10026364 Ga0207712_100263642 872
26 3300026095 Ga0207676_10009688 Ga0207676_100096882 872
27 3300026142 Ga0207698_10009116 Ga0207698_100091163 872
28 3300028381 Ga0268264_10027058 Ga0268264_100270582 872
29 3300005577 Ga0068857_100007523 Ga0068857_1000075233 873
30 3300005614 Ga0068856_100049195 Ga0068856_1000491952 873
31 3300009545 Ga0105237_10010186 Ga0105237_100101861 873
32 3300003320 rootH2_10002197 rootH2_100021978 874
33 3300025986 Ga0207658_10012474 Ga0207658_100124742 875
34 3300003323 rootH1_10012052 rootH1_1001205250 877
35 3300031548 Ga0307408_100033129 Ga0307408_1000331292 879
36 3300049670 Ga0501236_000344 Ga0501236_000344_1826_4579 879
37 3300013296 Ga0157374_10000001 Ga0157374_10000001790 880
38 3300031548 Ga0307408_100010890 Ga0307408_1000108903 881
39 3300025302 Ga0207426_1000089 Ga0207426_1000089181 887
40 3300010375 Ga0105239_10000343 Ga0105239_1000034369 889
41 3300013306 Ga0163162_10026751 Ga0163162_100267512 889
42 3300047443 Ga0495687_000035 Ga0495687_000035_48139_50949 889
43 3300030521 Ga0307511_10000285 Ga0307511_1000028537 891
44 3300036712 Ga0316584_0001915 Ga0316584_0001915_4060_6843 891
45 3300005985 Ga0081539_10000418 Ga0081539_1000041820 892
46 3300003316 rootH1_10004416 rootH1_100044162 893
47 3300003320 rootH2_10000355 rootH2_100003554 893
48 3300003322 rootL2_10000249 rootL2_1000024913 893
49 3300003323 rootH1_10016264 rootH1_100162648 893
50 3300031507 Ga0307509_10070612 Ga0307509_100706122 895
51 3300010375 Ga0105239_10003525 Ga0105239_100035256 896
52 3300046471 Ga0495650_0000050 Ga0495650_0000050_243190_245964 896
53 3300046660 Ga0495625_0000105 Ga0495625_0000105_7434_10208 896
54 3300046694 Ga0495649_0000011 Ga0495649_0000011_114733_117507 896
55 3300003316 rootH1_10184069 rootH1_101840692 897
56 3300021384 Ga0213876_10002769 Ga0213876_100027693 898
57 3300031251 Ga0265327_10006088 Ga0265327_100060885 898
58 3300039437 Ga0436365_1874674 Ga0436365_1874674_28225_30996 898
59 3300005614 Ga0068856_100060693 Ga0068856_1000606931 899
60 3300009174 Ga0105241_10006659 Ga0105241_100066593 899
61 3300010375 Ga0105239_10025624 Ga0105239_100256242 899
62 iso_pu_bacteria 2599185184 2599480072 899
63 3300005539 Ga0068853_100016288 Ga0068853_1000162883 900
64 3300005843 Ga0068860_100000041 Ga0068860_10000004137 900
65 3300009553 Ga0105249_10045214 Ga0105249_100452142 900
66 3300013306 Ga0163162_10001121 Ga0163162_1000112115 900
67 3300028381 Ga0268264_10000252 Ga0268264_1000025243 900
68 3300046507 Ga0495606_0000581 Ga0495606_0000581_4168_6942 901
69 3300046513 Ga0495616_0000271 Ga0495616_0000271_34496_37270 901
70 iso_pu_bacteria 2738541278 2738725812 901
71 3300047472 Ga0495686_0000039 Ga0495686_0000039_124387_127140 902
72 3300047472 Ga0495686_0001920 Ga0495686_0001920_17539_20295 902
73 3300031548 Ga0307408_100002333 Ga0307408_1000023333 903
74 3300042014 Ga0439457_001084 Ga0439457_001084_2322_5090 903
75 3300044658 Ga0466972_0000047 Ga0466972_0000047_61773_64541 903
76 3300049705 Ga0501225_0000493 Ga0501225_0000493_2106_4874 903
77 3300044842 Ga0466957_0000205 Ga0466957_0000205_1762_4533 904
78 3300009545 Ga0105237_10021668 Ga0105237_100216684 905
79 3300010375 Ga0105239_10000126 Ga0105239_1000012620 905
80 3300013306 Ga0163162_10000404 Ga0163162_1000040436 905
81 3300013307 Ga0157372_10000329 Ga0157372_100003295 905
82 3300013307 Ga0157372_10004248 Ga0157372_100042486 905
83 3300025904 Ga0207647_10014386 Ga0207647_100143864 905
84 3300046524 Ga0495648_0005326 Ga0495648_0005326_720_3470 905
85 3300009093 Ga0105240_10044750 Ga0105240_100447504 906
86 3300009545 Ga0105237_10033878 Ga0105237_100338784 906
87 3300047472 Ga0495686_0004769 Ga0495686_0004769_2327_5089 906
88 3300005539 Ga0068853_100004370 Ga0068853_1000043708 907
89 3300005843 Ga0068860_100001176 Ga0068860_10000117613 907
90 3300009551 Ga0105238_10031989 Ga0105238_100319893 907
91 3300010375 Ga0105239_10031323 Ga0105239_100313232 907
92 3300025913 Ga0207695_10045020 Ga0207695_100450202 907
93 3300026041 Ga0207639_10001813 Ga0207639_100018133 907
94 3300028381 Ga0268264_10001915 Ga0268264_100019154 907
95 iso_pu_bacteria 2911138879 2911139398 907
96 3300005718 Ga0068866_10003651 Ga0068866_100036514 908
97 3300006881 Ga0068865_100006237 Ga0068865_1000062372 908
98 3300010375 Ga0105239_10000596 Ga0105239_100005966 908
99 3300013296 Ga0157374_10000002 Ga0157374_10000002352 908
100 3300013306 Ga0163162_10056351 Ga0163162_100563512 908
101 3300013307 Ga0157372_10064524 Ga0157372_100645242 908
102 3300026089 Ga0207648_10000906 Ga0207648_1000090623 908
103 3300005548 Ga0070665_100000066 Ga0070665_100000066110 909
104 3300009093 Ga0105240_10000846 Ga0105240_1000084613 909
105 3300009174 Ga0105241_10013362 Ga0105241_100133625 909
106 3300025911 Ga0207654_10017165 Ga0207654_100171652 909
107 3300025913 Ga0207695_10000687 Ga0207695_1000068735 909
108 3300028379 Ga0268266_10000010 Ga0268266_1000001032 909
109 3300045049 Ga0466959_0014635 Ga0466959_0014635_226_3000 909
110 3300047472 Ga0495686_0000061 Ga0495686_0000061_76904_79687 909
111 3300053156 Ga0500622_0003249 Ga0500622_0003249_5744_8524 909
112 3300003320 rootH2_10001886 rootH2_1000188622 910
113 3300005327 Ga0070658_10001820 Ga0070658_100018204 910
114 3300005327 Ga0070658_10006334 Ga0070658_100063345 910
115 3300005328 Ga0070676_10000272 Ga0070676_100002724 910
116 3300005335 Ga0070666_10001259 Ga0070666_100012594 910
117 3300005336 Ga0070680_100000819 Ga0070680_1000008192 910
118 3300005338 Ga0068868_100000779 Ga0068868_1000007796 910
119 3300005341 Ga0070691_10001460 Ga0070691_100014603 910
120 3300005347 Ga0070668_100000407 Ga0070668_10000040710 910
121 3300005364 Ga0070673_100001651 Ga0070673_1000016514 910
122 3300005367 Ga0070667_100002037 Ga0070667_1000020374 910
123 3300005457 Ga0070662_100011710 Ga0070662_1000117102 910
124 3300005458 Ga0070681_10001439 Ga0070681_100014396 910
125 3300005459 Ga0068867_100002845 Ga0068867_1000028454 910
126 3300005530 Ga0070679_100001817 Ga0070679_1000018174 910
127 3300005543 Ga0070672_100001007 Ga0070672_1000010074 910
128 3300005548 Ga0070665_100005599 Ga0070665_1000055994 910
129 3300005563 Ga0068855_100034798 Ga0068855_1000347982 910
130 3300005563 Ga0068855_100038277 Ga0068855_1000382773 910
131 3300005618 Ga0068864_100001705 Ga0068864_1000017055 910
132 3300005834 Ga0068851_10000791 Ga0068851_100007914 910
133 3300005841 Ga0068863_100002544 Ga0068863_1000025444 910
134 3300005842 Ga0068858_100000891 Ga0068858_1000008914 910
135 3300005843 Ga0068860_100001667 Ga0068860_10000166711 910
136 3300005983 Ga0081540_1005738 Ga0081540_10057387 910
137 3300006881 Ga0068865_100018699 Ga0068865_1000186993 910
138 3300009093 Ga0105240_10004962 Ga0105240_1000496211 910
139 3300009093 Ga0105240_10042323 Ga0105240_100423232 910
140 3300009098 Ga0105245_10009876 Ga0105245_100098763 910
141 3300009174 Ga0105241_10000777 Ga0105241_100007779 910
142 3300009176 Ga0105242_10009220 Ga0105242_100092203 910
143 3300009553 Ga0105249_10001645 Ga0105249_100016455 910
144 3300010375 Ga0105239_10000128 Ga0105239_1000012842 910
145 3300013104 Ga0157370_10002183 Ga0157370_100021835 910
146 3300013296 Ga0157374_10002032 Ga0157374_100020324 910
147 3300013306 Ga0163162_10000275 Ga0163162_100002754 910
148 3300013306 Ga0163162_10028641 Ga0163162_100286412 910
149 3300013307 Ga0157372_10014134 Ga0157372_100141343 910
150 3300013308 Ga0157375_10000295 Ga0157375_1000029526 910
151 3300014325 Ga0163163_10001212 Ga0163163_100012126 910
152 3300014968 Ga0157379_10001715 Ga0157379_100017155 910
153 3300014969 Ga0157376_10001094 Ga0157376_100010945 910
154 3300014969 Ga0157376_10001183 Ga0157376_100011834 910
155 3300025321 Ga0207656_10002275 Ga0207656_100022752 910
156 3300025903 Ga0207680_10003816 Ga0207680_100038163 910
157 3300025907 Ga0207645_10002857 Ga0207645_100028575 910
158 3300025909 Ga0207705_10004320 Ga0207705_100043204 910
159 3300025911 Ga0207654_10000979 Ga0207654_100009795 910
160 3300025912 Ga0207707_10000785 Ga0207707_1000078514 910
161 3300025913 Ga0207695_10031628 Ga0207695_100316284 910
162 3300025921 Ga0207652_10001257 Ga0207652_1000125715 910
163 3300025933 Ga0207706_10027291 Ga0207706_100272912 910
164 3300025934 Ga0207686_10027456 Ga0207686_100274562 910
165 3300025938 Ga0207704_10010680 Ga0207704_100106802 910
166 3300025940 Ga0207691_10000372 Ga0207691_1000037226 910
167 3300025949 Ga0207667_10031747 Ga0207667_100317472 910
168 3300025960 Ga0207651_10000753 Ga0207651_100007534 910
169 3300025972 Ga0207668_10000309 Ga0207668_100003094 910
170 3300025986 Ga0207658_10001348 Ga0207658_100013484 910
171 3300026023 Ga0207677_10003184 Ga0207677_100031842 910
172 3300026088 Ga0207641_10001017 Ga0207641_100010174 910
173 3300026089 Ga0207648_10008447 Ga0207648_100084473 910
174 3300026095 Ga0207676_10002209 Ga0207676_100022094 910
175 3300028381 Ga0268264_10002552 Ga0268264_100025524 910
176 3300046648 Ga0495611_0000322 Ga0495611_0000322_17353_20133 910
177 iso_pu_bacteria 2928078545 2928081180 910
178 iso_pu_bacteria 2928147474 2928150644 910
179 iso_pu_bacteria 2932082852 2932085934 910
180 3300003323 rootH1_10024956 rootH1_1002495617 911
181 3300005563 Ga0068855_100013616 Ga0068855_1000136163 911
182 3300005577 Ga0068857_100000234 Ga0068857_10000023414 911
183 3300005616 Ga0068852_100000661 Ga0068852_10000066111 911
184 3300005843 Ga0068860_100002303 Ga0068860_10000230312 911
185 3300009093 Ga0105240_10001547 Ga0105240_1000154723 911
186 3300009093 Ga0105240_10004596 Ga0105240_100045968 911
187 3300009545 Ga0105237_10003018 Ga0105237_100030184 911
188 3300010375 Ga0105239_10000779 Ga0105239_1000077916 911
189 3300013105 Ga0157369_10026930 Ga0157369_100269304 911
190 3300013307 Ga0157372_10000406 Ga0157372_1000040636 911
191 3300013307 Ga0157372_10003688 Ga0157372_100036887 911
192 3300025904 Ga0207647_10012555 Ga0207647_100125552 911
193 3300025904 Ga0207647_10019229 Ga0207647_100192292 911
194 3300025913 Ga0207695_10007884 Ga0207695_100078845 911
195 3300025913 Ga0207695_10010857 Ga0207695_100108579 911
196 3300025914 Ga0207671_10006363 Ga0207671_100063636 911
197 3300025949 Ga0207667_10000151 Ga0207667_1000015137 911
198 3300026116 Ga0207674_10000935 Ga0207674_1000093531 911
199 3300005563 Ga0068855_100000231 Ga0068855_10000023148 912
200 3300025913 Ga0207695_10000073 Ga0207695_10000073123 912
201 3300025949 Ga0207667_10001533 Ga0207667_100015333 912
202 3300049580 Ga0501046_0047815 Ga0501046_0047815_168_2951 912
203 3300049581 Ga0501047_0031195 Ga0501047_0031195_1547_4330 912
204 3300049586 Ga0501070_0009727 Ga0501070_0009727_4644_7427 912
205 3300054114 Ga0501084_0005613 Ga0501084_0005613_6224_9007 912
206 3300003320 rootH2_10035550 rootH2_100355504 913
207 3300046492 Ga0495585_0000248 Ga0495585_0000248_8508_11282 913
208 3300001990 JGI24737J22298_10000044 JGI24737J22298_1000004415 914
209 3300002067 JGI24735J21928_10000005 JGI24735J21928_10000005202 914
210 3300013307 Ga0157372_10006312 Ga0157372_1000631211 914

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13715

CarbopepD_reg_2

CarboxypepD_reg-like domain

199

283

0.93

PF07715

Plug

TonB-dependent Receptor Plug Domain

290

397

0.87

PF13620

CarboxypepD_reg

Carboxypeptidase regulatory-like domain

198

274

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qmu-assembly1.cif.gz_A duck carboxypeptidase d domain ii 0.9205 166 240
2nsm-assembly1.cif.gz_A crystal structure of the human carboxypeptidase n (kininase i) catalytic domain 0.864 166 240
3mn8-assembly4.cif.gz_D structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8512 166 240
3mn8-assembly3.cif.gz_C structure of drosophila melanogaster carboxypeptidase d isoform 1b short 0.8491 166 240
5aq0-assembly1.cif.gz_A the structure of the transthyretin-like domain of the first catalytic domain of the human carboxypeptidase d 0.8448 166 240
ID Description Score Start End Superfamily
af_E7FFQ7_717_794_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9146 167 240 2.60.40.1120
af_O75976_383_462_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9141 166 240 2.60.40.1120
af_Q9JHW1_1212_1304_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9038 166 240 2.60.40.1120
af_P15087_375_469_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.9002 166 240 2.60.40.1120
af_P42787_763_851_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8998 166 243 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A1F3NB72-F1-model_v4 TonB-dependent receptor 0.9579 284 914 GO:0009279
GO:0015344
AF-A0A3D3L3N6-F1-model_v4 Carboxypeptidase-like regulatory domain-containing protein 0.947 161 237
AF-A0A1F3NB72-F1-model_v4 TonB-dependent receptor 0.939 284 914 GO:0009279
GO:0015344
AF-A0A849FKD6-F1-model_v4 TonB-dependent receptor 0.9293 239 914 GO:0009279
GO:0015344
AF-A0A849FKD6-F1-model_v4 TonB-dependent receptor 0.9056 239 914 GO:0009279
GO:0015344

Feature Viewer

pLDDT pTM Quality
74.55 0.64 Medium
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Predicted Structure (AlphaFold2)

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