F320353

General Info

Members Datasets Scaffolds Average Seq Length
210 110 420 145

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_11346680|Ga0157378_113466801
Length 158
Sequence LGDGGGVEPVMMQTVQLAIADGVYAAALREALSHTCAWHVESVGCPDPSQHCVLVLDQAGLEQLPLPLSNPERIVLITHRDSQLMAEAWEAGIVSVVSAQDPMSTVLLAIMAAGLRVDKPHNPHATSGISPTSVPANASLPPEHRYSGSKRAKHNRLA

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
66 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
70 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.43
Rhizosphere 98.57
Stem 0
Stem Tuber 0
Unclassified 37.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_11346680 3300013297 Unclassified 756
2 Ga0065712_10758755 3300005290 Bacteria 526
3 Ga0070683_100000008 3300005329 Bacteria 329206
4 Ga0070683_100019105 3300005329 Bacteria 6081
5 Ga0070683_100296992 3300005329 Unclassified 1536
6 Ga0070683_100832482 3300005329 Bacteria 885
7 Ga0070670_101459060 3300005331 Bacteria 628
8 Ga0070666_10356007 3300005335 Unclassified 1048
9 Ga0070682_100513541 3300005337 Unclassified 931
10 Ga0068868_100358281 3300005338 Unclassified 1251
11 Ga0070667_100969833 3300005367 Unclassified 793
12 Ga0070667_101050497 3300005367 Bacteria 761
13 Ga0070714_102084005 3300005435 Bacteria 553
14 Ga0070678_100319767 3300005456 Bacteria 1325
15 Ga0070685_11147952 3300005466 Unclassified 589
16 Ga0070684_100000002 3300005535 Bacteria 257669
17 Ga0070684_100241283 3300005535 Unclassified 1651
18 Ga0068855_100549099 3300005563 Bacteria 1251
19 Ga0068857_100220630 3300005577 Bacteria 1732
20 Ga0068859_100286115 3300005617 Bacteria 1741
21 Ga0068859_101213441 3300005617 Bacteria 831
22 Ga0068859_102830352 3300005617 Viruses 532
23 Ga0068864_101461892 3300005618 Unclassified 686
24 Ga0068863_100044242 3300005841 Bacteria 4227
25 Ga0068858_100144172 3300005842 Bacteria 2237
26 Ga0068858_100409192 3300005842 Bacteria 1304
27 Ga0068860_100536633 3300005843 Bacteria 1171
28 Ga0068860_101445722 3300005843 Unclassified 709
29 Ga0068860_102183202 3300005843 Viruses 575
30 Ga0097621_100130650 3300006237 Bacteria 2138
31 Ga0097621_101604294 3300006237 Unclassified 619
32 Ga0068871_100039176 3300006358 Bacteria 3791
33 Ga0068871_100369624 3300006358 Unclassified 1272
34 Ga0068871_100691746 3300006358 Unclassified 934
35 Ga0068871_102077097 3300006358 Unclassified 541
36 Ga0097620_100286116 3300006931 Bacteria 1741
37 Ga0097620_101213452 3300006931 Bacteria 831
38 Ga0097620_102830786 3300006931 Viruses 532
39 Ga0105240_10001669 3300009093 Bacteria 37675
40 Ga0105240_10159281 3300009093 Bacteria 2683
41 Ga0105242_10673473 3300009176 Bacteria 1009
42 Ga0105248_10098434 3300009177 Bacteria 3295
43 Ga0105248_10143585 3300009177 Bacteria 2693
44 Ga0105248_10590085 3300009177 Unclassified 1254
45 Ga0105248_10844513 3300009177 Bacteria 1034
46 Ga0105237_10012421 3300009545 Bacteria 8977
47 Ga0105237_10135539 3300009545 Bacteria 2457
48 Ga0105237_10498640 3300009545 Unclassified 1224
49 Ga0105237_10759145 3300009545 Unclassified 976
50 Ga0105237_11725640 3300009545 Unclassified 633
51 Ga0105238_10939528 3300009551 Unclassified 884
52 Ga0105238_11361003 3300009551 Unclassified 737
53 Ga0105239_10201695 3300010375 Bacteria 2229
54 Ga0105239_10421940 3300010375 Bacteria 1511
55 Ga0105239_10765914 3300010375 Unclassified 1105
56 Ga0105239_12680590 3300010375 Unclassified 581
57 Ga0105246_10594807 3300011119 Bacteria 955
58 Ga0105246_10604084 3300011119 Unclassified 948
59 Ga0157370_10671212 3300013104 Unclassified 947
60 Ga0157370_11114717 3300013104 Bacteria 713
61 Ga0157370_11180145 3300013104 Unclassified 691
62 Ga0157369_10060113 3300013105 Bacteria 4098
63 Ga0157369_10089646 3300013105 Bacteria 3283
64 Ga0157374_10130467 3300013296 Bacteria 2432
65 Ga0157374_10154266 3300013296 Unclassified 2234
66 Ga0157374_10702018 3300013296 Unclassified 1025
67 Ga0157378_12440878 3300013297 Unclassified 575
68 Ga0163162_10131079 3300013306 Bacteria 2616
69 Ga0163162_10370059 3300013306 Bacteria 1566
70 Ga0163162_11321246 3300013306 Viruses 819
71 Ga0163162_11535762 3300013306 Unclassified 759
72 Ga0157372_10184052 3300013307 Bacteria 2419
73 Ga0157372_10757094 3300013307 Bacteria 1129
74 Ga0157372_12166490 3300013307 Unclassified 639
75 Ga0157375_10044256 3300013308 Bacteria 4323
76 Ga0157375_10126799 3300013308 Bacteria 2668
77 Ga0157375_10288656 3300013308 Bacteria 1803
78 Ga0157375_13105937 3300013308 Unclassified 554
79 Ga0163163_10008848 3300014325 Bacteria 8963
80 Ga0163163_10048015 3300014325 Bacteria 4196
81 Ga0163163_10193838 3300014325 Bacteria 2080
82 Ga0157379_11442677 3300014968 Viruses 668
83 Ga0157376_10035404 3300014969 Bacteria 4038
84 Ga0157376_10191988 3300014969 Bacteria 1873
85 Ga0157376_11315765 3300014969 Bacteria 753
86 Ga0157376_11925425 3300014969 Unclassified 628
87 Ga0157376_11998116 3300014969 Unclassified 617
88 Ga0207680_10266151 3300025903 Bacteria 1188
89 Ga0207695_10003780 3300025913 Bacteria 21003
90 Ga0207671_10022456 3300025914 Bacteria 4771
91 Ga0207671_10152081 3300025914 Bacteria 1788
92 Ga0207671_10712061 3300025914 Unclassified 798
93 Ga0207681_10734979 3300025923 Unclassified 822
94 Ga0207694_10025672 3300025924 Bacteria 4479
95 Ga0207650_10665346 3300025925 Bacteria 878
96 Ga0207664_10767146 3300025929 Bacteria 867
97 Ga0207670_10042844 3300025936 Bacteria 2985
98 Ga0207711_10064700 3300025941 Bacteria 3159
99 Ga0207711_10109795 3300025941 Bacteria 2452
100 Ga0207711_10183402 3300025941 Bacteria 1904
101 Ga0207711_10755225 3300025941 Unclassified 906
102 Ga0207711_11577935 3300025941 Unclassified 600
103 Ga0207689_11139016 3300025942 Unclassified 657
104 Ga0207661_10000008 3300025944 Bacteria 451211
105 Ga0207661_10020453 3300025944 Bacteria 4948
106 Ga0207667_10432225 3300025949 Bacteria 1339
107 Ga0207658_10603853 3300025986 Bacteria 986
108 Ga0207677_10495962 3300026023 Unclassified 1055
109 Ga0207703_10832425 3300026035 Bacteria 882
110 Ga0207641_10082076 3300026088 Bacteria 2800
111 Ga0207674_10400000 3300026116 Unclassified 1327
112 Ga0207683_10349125 3300026121 Bacteria 1358
113 Ga0207683_10364476 3300026121 Bacteria 1327
114 Ga0268266_10190361 3300028379 Bacteria 1873
115 Ga0268264_11299542 3300028381 Unclassified 737
116 Ga0265332_10363020 3300031238 Unclassified 598
117 Ga0265339_10343449 3300031249 Unclassified 705
118 Ga0265331_10188162 3300031250 Unclassified 932
119 Ga0265316_10005440 3300031344 Bacteria 12376
120 Ga0265316_10106512 3300031344 Bacteria 2126
121 Ga0265314_10031970 3300031711 Bacteria 3878
122 Ga0265342_10042654 3300031712 Bacteria 2740
123 Ga0265342_10225157 3300031712 Bacteria 1009
124 Ga0373954_0212092 3300035118 Unclassified 952
125 Ga0373954_0363121 3300035118 Unclassified 715
126 Ga0373957_0260358 3300035120 Unclassified 731
127 Ga0373935_0417111 3300035692 Unclassified 966
128 Ga0373927_0433226 3300035695 Unclassified 868
129 Ga0373933_0239470 3300035724 Unclassified 1167
130 Ga0373933_0245732 3300035724 Unclassified 1152
131 Ga0373933_0791659 3300035724 Unclassified 624
132 Ga0373937_0086011 3300036401 Bacteria 2910
133 Ga0373937_0777585 3300036401 Unclassified 905
134 Ga0373937_0804856 3300036401 Unclassified 888
135 Ga0373925_0397481 3300037068 Unclassified 1124
136 Ga0451577_1026432 3300042876 Unclassified 740
137 Ga0466963_0359214 3300044694 Unclassified 1026
138 Ga0451576_0595488 3300045051 Bacteria 1162
139 Ga0451576_0692017 3300045051 Bacteria 1071
140 Ga0451576_1398656 3300045051 Unclassified 728
141 Ga0495592_0042478 3300046454 Bacteria 3404
142 Ga0495629_0168648 3300046459 Bacteria 1520
143 Ga0495651_0006339 3300046462 Bacteria 9049
144 Ga0495651_0027715 3300046462 Bacteria 4414
145 Ga0495653_0199109 3300046463 Bacteria 1360
146 Ga0495580_0005505 3300046472 Bacteria 10461
147 Ga0495580_0067788 3300046472 Bacteria 2496
148 Ga0495580_0311080 3300046472 Unclassified 1071
149 Ga0495580_0385907 3300046472 Bacteria 946
150 Ga0495580_0960925 3300046472 Unclassified 546
151 Ga0495582_0292900 3300046473 Unclassified 935
152 Ga0495639_0153200 3300046475 Bacteria 1113
153 Ga0495662_0023583 3300046476 Bacteria 2971
154 Ga0495664_0069941 3300046477 Bacteria 2095
155 Ga0495664_0505909 3300046477 Unclassified 721
156 Ga0495594_0608355 3300046499 Unclassified 619
157 Ga0495628_0027074 3300046516 Bacteria 4667
158 Ga0495630_0222393 3300046517 Bacteria 1441
159 Ga0495652_0042085 3300046529 Bacteria 3940
160 Ga0495652_0058772 3300046529 Bacteria 3255
161 Ga0495652_1083202 3300046529 Unclassified 521
162 Ga0495665_0056739 3300046531 Unclassified 2067
163 Ga0495665_0258794 3300046531 Unclassified 895
164 Ga0495640_0072758 3300046533 Bacteria 2302
165 Ga0495640_0323878 3300046533 Bacteria 954
166 Ga0495640_0725367 3300046533 Unclassified 595
167 Ga0495587_0030349 3300046536 Bacteria 3279
168 Ga0495587_0138698 3300046536 Bacteria 1388
169 Ga0495587_0716296 3300046536 Unclassified 548
170 Ga0495645_0057087 3300046543 Bacteria 2834
171 Ga0495645_0235204 3300046543 Bacteria 1225
172 Ga0495645_0299651 3300046543 Unclassified 1051
173 Ga0495645_0307231 3300046543 Unclassified 1034
174 Ga0495667_0074552 3300046559 Bacteria 2209
175 Ga0495667_0150880 3300046559 Unclassified 1496
176 Ga0495634_0112767 3300046642 Bacteria 1747
177 Ga0495635_0051149 3300046663 Bacteria 2848
178 Ga0495635_0357658 3300046663 Unclassified 973
179 Ga0495657_0054532 3300046675 Bacteria 2670
180 Ga0495657_0213054 3300046675 Bacteria 1174
181 Ga0495599_0065409 3300046678 Bacteria 2272
182 Ga0495599_0084715 3300046678 Bacteria 1980
183 Ga0495599_0417145 3300046678 Unclassified 798
184 Ga0495623_0019310 3300046679 Bacteria 4406
185 Ga0495623_0103425 3300046679 Bacteria 1733
186 Ga0495623_0154070 3300046679 Bacteria 1356
187 Ga0495646_0197248 3300046680 Unclassified 1098
188 Ga0495613_0321087 3300046689 Bacteria 1069
189 Ga0495604_0035924 3300047317 Bacteria 3910
190 Ga0495674_0008836 3300047319 Bacteria 9584
191 Ga0495674_0016049 3300047319 Bacteria 6990
192 Ga0495674_0153444 3300047319 Bacteria 1930
193 Ga0495674_0698645 3300047319 Unclassified 796
194 Ga0495680_0082239 3300047322 Bacteria 2430
195 Ga0495680_0090304 3300047322 Bacteria 2298
196 Ga0495675_0029493 3300047444 Bacteria 3500
197 Ga0495675_0068617 3300047444 Bacteria 2240
198 Ga0495684_0005459 3300047471 Bacteria 9890
199 Ga0495684_0035113 3300047471 Bacteria 3846
200 Ga0495684_0038999 3300047471 Unclassified 3641
201 Ga0495684_0203928 3300047471 Bacteria 1457
202 Ga0495602_0023804 3300048088 Bacteria 5957
203 Ga0495602_0115361 3300048088 Unclassified 2173
204 Ga0495602_0129711 3300048088 Bacteria 2013
205 Ga0495614_0214293 3300048089 Unclassified 874
206 Ga0495614_0274542 3300048089 Unclassified 775
207 Ga0496104_1735463 3300048907 Bacteria 527
208 Ga0496112_0453721 3300048915 Bacteria 1220
209 Ga0496115_0139355 3300048918 Bacteria 2001
210 Ga0501082_0009832 3300060353 Bacteria 8243
211 Ga0157378_11346680
212 Ga0065712_10758755
213 Ga0070683_100000008
214 Ga0070683_100019105
215 Ga0070683_100296992
216 Ga0070683_100832482
217 Ga0070670_101459060
218 Ga0070666_10356007
219 Ga0070682_100513541
220 Ga0068868_100358281
221 Ga0070667_100969833
222 Ga0070667_101050497
223 Ga0070714_102084005
224 Ga0070678_100319767
225 Ga0070685_11147952
226 Ga0070684_100000002
227 Ga0070684_100241283
228 Ga0068855_100549099
229 Ga0068857_100220630
230 Ga0068859_100286115
231 Ga0068859_101213441
232 Ga0068859_102830352
233 Ga0068864_101461892
234 Ga0068863_100044242
235 Ga0068858_100144172
236 Ga0068858_100409192
237 Ga0068860_100536633
238 Ga0068860_101445722
239 Ga0068860_102183202
240 Ga0097621_100130650
241 Ga0097621_101604294
242 Ga0068871_100039176
243 Ga0068871_100369624
244 Ga0068871_100691746
245 Ga0068871_102077097
246 Ga0097620_100286116
247 Ga0097620_101213452
248 Ga0097620_102830786
249 Ga0105240_10001669
250 Ga0105240_10159281
251 Ga0105242_10673473
252 Ga0105248_10098434
253 Ga0105248_10143585
254 Ga0105248_10590085
255 Ga0105248_10844513
256 Ga0105237_10012421
257 Ga0105237_10135539
258 Ga0105237_10498640
259 Ga0105237_10759145
260 Ga0105237_11725640
261 Ga0105238_10939528
262 Ga0105238_11361003
263 Ga0105239_10201695
264 Ga0105239_10421940
265 Ga0105239_10765914
266 Ga0105239_12680590
267 Ga0105246_10594807
268 Ga0105246_10604084
269 Ga0157370_10671212
270 Ga0157370_11114717
271 Ga0157370_11180145
272 Ga0157369_10060113
273 Ga0157369_10089646
274 Ga0157374_10130467
275 Ga0157374_10154266
276 Ga0157374_10702018
277 Ga0157378_12440878
278 Ga0163162_10131079
279 Ga0163162_10370059
280 Ga0163162_11321246
281 Ga0163162_11535762
282 Ga0157372_10184052
283 Ga0157372_10757094
284 Ga0157372_12166490
285 Ga0157375_10044256
286 Ga0157375_10126799
287 Ga0157375_10288656
288 Ga0157375_13105937
289 Ga0163163_10008848
290 Ga0163163_10048015
291 Ga0163163_10193838
292 Ga0157379_11442677
293 Ga0157376_10035404
294 Ga0157376_10191988
295 Ga0157376_11315765
296 Ga0157376_11925425
297 Ga0157376_11998116
298 Ga0207680_10266151
299 Ga0207695_10003780
300 Ga0207671_10022456
301 Ga0207671_10152081
302 Ga0207671_10712061
303 Ga0207681_10734979
304 Ga0207694_10025672
305 Ga0207650_10665346
306 Ga0207664_10767146
307 Ga0207670_10042844
308 Ga0207711_10064700
309 Ga0207711_10109795
310 Ga0207711_10183402
311 Ga0207711_10755225
312 Ga0207711_11577935
313 Ga0207689_11139016
314 Ga0207661_10000008
315 Ga0207661_10020453
316 Ga0207667_10432225
317 Ga0207658_10603853
318 Ga0207677_10495962
319 Ga0207703_10832425
320 Ga0207641_10082076
321 Ga0207674_10400000
322 Ga0207683_10349125
323 Ga0207683_10364476
324 Ga0268266_10190361
325 Ga0268264_11299542
326 Ga0265332_10363020
327 Ga0265339_10343449
328 Ga0265331_10188162
329 Ga0265316_10005440
330 Ga0265316_10106512
331 Ga0265314_10031970
332 Ga0265342_10042654
333 Ga0265342_10225157
334 Ga0373954_0212092
335 Ga0373954_0363121
336 Ga0373957_0260358
337 Ga0373935_0417111
338 Ga0373927_0433226
339 Ga0373933_0239470
340 Ga0373933_0245732
341 Ga0373933_0791659
342 Ga0373937_0086011
343 Ga0373937_0777585
344 Ga0373937_0804856
345 Ga0373925_0397481
346 Ga0451577_1026432
347 Ga0466963_0359214
348 Ga0451576_0595488
349 Ga0451576_0692017
350 Ga0451576_1398656
351 Ga0495592_0042478
352 Ga0495629_0168648
353 Ga0495651_0006339
354 Ga0495651_0027715
355 Ga0495653_0199109
356 Ga0495580_0005505
357 Ga0495580_0067788
358 Ga0495580_0311080
359 Ga0495580_0385907
360 Ga0495580_0960925
361 Ga0495582_0292900
362 Ga0495639_0153200
363 Ga0495662_0023583
364 Ga0495664_0069941
365 Ga0495664_0505909
366 Ga0495594_0608355
367 Ga0495628_0027074
368 Ga0495630_0222393
369 Ga0495652_0042085
370 Ga0495652_0058772
371 Ga0495652_1083202
372 Ga0495665_0056739
373 Ga0495665_0258794
374 Ga0495640_0072758
375 Ga0495640_0323878
376 Ga0495640_0725367
377 Ga0495587_0030349
378 Ga0495587_0138698
379 Ga0495587_0716296
380 Ga0495645_0057087
381 Ga0495645_0235204
382 Ga0495645_0299651
383 Ga0495645_0307231
384 Ga0495667_0074552
385 Ga0495667_0150880
386 Ga0495634_0112767
387 Ga0495635_0051149
388 Ga0495635_0357658
389 Ga0495657_0054532
390 Ga0495657_0213054
391 Ga0495599_0065409
392 Ga0495599_0084715
393 Ga0495599_0417145
394 Ga0495623_0019310
395 Ga0495623_0103425
396 Ga0495623_0154070
397 Ga0495646_0197248
398 Ga0495613_0321087
399 Ga0495604_0035924
400 Ga0495674_0008836
401 Ga0495674_0016049
402 Ga0495674_0153444
403 Ga0495674_0698645
404 Ga0495680_0082239
405 Ga0495680_0090304
406 Ga0495675_0029493
407 Ga0495675_0068617
408 Ga0495684_0005459
409 Ga0495684_0035113
410 Ga0495684_0038999
411 Ga0495684_0203928
412 Ga0495602_0023804
413 Ga0495602_0115361
414 Ga0495602_0129711
415 Ga0495614_0214293
416 Ga0495614_0274542
417 Ga0496104_1735463
418 Ga0496112_0453721
419 Ga0496115_0139355
420 Ga0501082_0009832

MSA Aligner

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qkk-assembly1.cif.gz_A-2 crystal structure of the receiver domain and linker region of dctd from sinorhizobium meliloti 0.7899 4 106
6zj2-assembly3.cif.gz_N structure of rcsb from salmonella enterica serovar typhimurium bound to promoter rpra in the presence of phosphomimetic bef3- 0.7813 3 102
4kfc-assembly1.cif.gz_A crystal structure of a hyperactive mutant of response regulator kdpe complexed to its promoter dna 0.781 1 110
4kny-assembly1.cif.gz_A crystal structure of the response regulator kdpe complexed to dna in an active-like conformation 0.7801 1 109
1nxp-assembly1.cif.gz_A micarec ph4.5 0.7795 3 106
ID Description Score Start End Superfamily
5hm6B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7791 1 105 3.40.50.2300
af_Q23917_160_371_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7705 4 107 3.40.50.2300
af_Q9FJ16_42_176_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7609 4 106 3.40.50.2300
af_P0AD01_1_135_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.758 2 101 3.40.50.2300
3lteE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.751 1 103 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7Y5LFN3-F1-model_v4 DNA-binding response regulator 0.9757 2 105
AF-A0A359M2B1-F1-model_v4 Response regulatory domain-containing protein 0.9635 1 107
AF-A0A7C2I0F9-F1-model_v4 Response regulator transcription factor 0.9498 2 107
AF-A0A359M2B1-F1-model_v4 Response regulatory domain-containing protein 0.9138 1 107
AF-A0A7C2I0F9-F1-model_v4 Response regulator transcription factor 0.8782 2 107

Map