F320270

General Info

Members Datasets Scaffolds Average Seq Length
210 117 420 560

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10026472|Ga0105240_100264723
Length 607
Sequence MRRPKNASPADWLNPSPYYANQKKEGSRNHMRQRVIPMLAPLTKPHPNGEGSYETKARGLAVLNSPLLNKGTAFTAEERKTLGLTGLLPPDISTLEAQVERAYIQYERLPDALSRNIYLTALHDRNEVLFYRMFSEHLREMIPIVNDLTVGMAMEQYHHECRPPRGVYLSIDHAGGIEEAFGNLGAGPEDIDLIVATDAEQILGIGDWGVGGIEVPIGKLAIYTAAGGIDPTRVIPVMLDVGTNRESLLDDGAYIGNRHARIRGERYDAFVEAYVEVVTRLFPRALLQWEDFSPTNGRRILERYRDSTCSFNDDMQGTGAITLAAAISAVRVCGTPLRHHRVVIFGAGTAGIGIADQIRDAMVREGLSPDEATRRFWCVDRAGLLTADMTDHLRAHQLTYARPAGECQSWKRDEGGAIGLAEVMRRARPTMLIGASTAAGSFTENIIREMAAHTDRPIIFALSNPSVRAEGNPADLIAWTEGRALIATGSPFGPVTYRGVTHVIAQVNNAMLYPGLALGVIISQARRISAGMFAAAASAVSSLVAVRQSGASLLPHIDDLRTVSMTVAAAVADAAVAEGLARVRFNDIVQQVQDAMWQPEYRRILAS

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
49 3300023672 Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300030762 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300030877 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300036457 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.29
Metatranscriptomes 5.71
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.1
Stem 0
Stem Tuber 0
Unclassified 15.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10026472 3300009093 Bacteria 7611
2 Ga0070683_100000668 3300005329 Bacteria 24820
3 Ga0070683_100000673 3300005329 Bacteria 24726
4 Ga0070683_100006260 3300005329 Bacteria 9986
5 Ga0070683_100123598 3300005329 Bacteria 2446
6 Ga0070680_100004856 3300005336 Bacteria 10123
7 Ga0070660_100022985 3300005339 Unclassified 4616
8 Ga0070691_10011219 3300005341 Bacteria 4088
9 Ga0070673_100036789 3300005364 Bacteria 3725
10 Ga0070673_100048589 3300005364 Unclassified 3309
11 Ga0070714_100002952 3300005435 Bacteria 12599
12 Ga0070714_100005934 3300005435 Bacteria 9377
13 Ga0070713_100002556 3300005436 Bacteria 11900
14 Ga0070713_100014567 3300005436 Bacteria 5846
15 Ga0070713_100034259 3300005436 Bacteria 4077
16 Ga0070713_100079209 3300005436 Unclassified 2798
17 Ga0070711_100074877 3300005439 Bacteria 2395
18 Ga0070678_100048377 3300005456 Unclassified 3062
19 Ga0070681_10010272 3300005458 Bacteria 9239
20 Ga0070681_10053222 3300005458 Bacteria 4034
21 Ga0070681_10092836 3300005458 Bacteria 2967
22 Ga0070706_100002669 3300005467 Bacteria 17863
23 Ga0070706_100144068 3300005467 Bacteria 2225
24 Ga0070707_100001057 3300005468 Bacteria 27225
25 Ga0070707_100018673 3300005468 Bacteria 6525
26 Ga0070679_100014983 3300005530 Bacteria 7449
27 Ga0070679_100136122 3300005530 Bacteria 2437
28 Ga0070684_100000386 3300005535 Bacteria 30619
29 Ga0070684_100000607 3300005535 Bacteria 24726
30 Ga0070684_100006826 3300005535 Bacteria 8855
31 Ga0070684_100043374 3300005535 Bacteria 3884
32 Ga0070684_100148077 3300005535 Bacteria 2126
33 Ga0068853_100049467 3300005539 Unclassified 3613
34 Ga0070695_100021293 3300005545 Bacteria 3966
35 Ga0070665_100062055 3300005548 Bacteria 3748
36 Ga0068855_100006040 3300005563 Bacteria 14772
37 Ga0068855_100051185 3300005563 Bacteria 4865
38 Ga0068855_100077606 3300005563 Unclassified 3854
39 Ga0068855_100187072 3300005563 Bacteria 2338
40 Ga0068857_100001338 3300005577 Bacteria 19407
41 Ga0068854_100034008 3300005578 Unclassified 3557
42 Ga0068856_100001575 3300005614 Bacteria 23874
43 Ga0068859_100097199 3300005617 Bacteria 2998
44 Ga0068863_100078291 3300005841 Unclassified 3131
45 Ga0068858_100079772 3300005842 Bacteria 3041
46 Ga0068858_100098173 3300005842 Unclassified 2731
47 Ga0070717_10049482 3300006028 Bacteria 3450
48 Ga0070717_10056024 3300006028 Bacteria 3255
49 Ga0097621_100011994 3300006237 Bacteria 6413
50 Ga0097621_100013742 3300006237 Bacteria 6045
51 Ga0068871_100003969 3300006358 Bacteria 10220
52 Ga0068871_100105850 3300006358 Bacteria 2361
53 Ga0097620_100097198 3300006931 Bacteria 2998
54 Ga0105240_10001609 3300009093 Bacteria 38288
55 Ga0105240_10005118 3300009093 Bacteria 19622
56 Ga0105240_10005652 3300009093 Bacteria 18562
57 Ga0105240_10046834 3300009093 Bacteria 5476
58 Ga0105240_10116671 3300009093 Unclassified 3220
59 Ga0105245_10000655 3300009098 Bacteria 31466
60 Ga0105245_10028874 3300009098 Bacteria 4896
61 Ga0105245_10040420 3300009098 Bacteria 4155
62 Ga0105243_10181770 3300009148 Bacteria 1829
63 Ga0105241_10023317 3300009174 Bacteria 4589
64 Ga0105242_10010800 3300009176 Bacteria 7013
65 Ga0105242_10164316 3300009176 Bacteria 1946
66 Ga0105248_10013155 3300009177 Bacteria 9111
67 Ga0105248_10016190 3300009177 Bacteria 8206
68 Ga0105248_10053683 3300009177 Unclassified 4521
69 Ga0105237_10008460 3300009545 Bacteria 11135
70 Ga0105238_10000444 3300009551 Bacteria 43442
71 Ga0105238_10067794 3300009551 Unclassified 3568
72 Ga0105238_10087923 3300009551 Bacteria 3094
73 Ga0105249_10009510 3300009553 Bacteria 8515
74 Ga0105239_10001243 3300010375 Bacteria 34669
75 Ga0105239_10006349 3300010375 Bacteria 13743
76 Ga0105239_10016050 3300010375 Bacteria 8288
77 Ga0105246_10044931 3300011119 Bacteria 3005
78 Ga0157370_10003244 3300013104 Bacteria 19173
79 Ga0157369_10000695 3300013105 Bacteria 43410
80 Ga0157369_10001088 3300013105 Bacteria 33954
81 Ga0157369_10108404 3300013105 Unclassified 2954
82 Ga0157378_10002861 3300013297 Bacteria 15395
83 Ga0163162_10175781 3300013306 Unclassified 2267
84 Ga0157372_10002038 3300013307 Bacteria 21977
85 Ga0157372_10008903 3300013307 Bacteria 10665
86 Ga0157372_10028266 3300013307 Bacteria 6120
87 Ga0157372_10037321 3300013307 Bacteria 5358
88 Ga0157372_10078967 3300013307 Unclassified 3720
89 Ga0157375_10005389 3300013308 Bacteria 11118
90 Ga0163163_10020764 3300014325 Bacteria 6191
91 Ga0163163_10120370 3300014325 Bacteria 2659
92 Ga0157379_10071667 3300014968 Unclassified 3100
93 Ga0213874_10010922 3300021377 Bacteria 2287
94 Ga0247553_100059 3300023672 Bacteria 2766
95 Ga0207653_10018566 3300025885 Bacteria 2190
96 Ga0207692_10050326 3300025898 Bacteria 2106
97 Ga0207699_10045427 3300025906 Bacteria 2564
98 Ga0207684_10006399 3300025910 Bacteria 10734
99 Ga0207684_10008037 3300025910 Bacteria 9420
100 Ga0207684_10081320 3300025910 Bacteria 2757
101 Ga0207684_10088540 3300025910 Bacteria 2638
102 Ga0207654_10002357 3300025911 Bacteria 9685
103 Ga0207654_10033908 3300025911 Unclassified 2833
104 Ga0207707_10001348 3300025912 Bacteria 22873
105 Ga0207695_10001123 3300025913 Bacteria 46509
106 Ga0207695_10002767 3300025913 Bacteria 25555
107 Ga0207695_10027055 3300025913 Bacteria 6390
108 Ga0207695_10048015 3300025913 Unclassified 4511
109 Ga0207660_10008380 3300025917 Bacteria 6687
110 Ga0207652_10034684 3300025921 Bacteria 4254
111 Ga0207646_10015427 3300025922 Bacteria 7216
112 Ga0207646_10032341 3300025922 Bacteria 4735
113 Ga0207646_10037362 3300025922 Bacteria 4378
114 Ga0207694_10000170 3300025924 Bacteria 67254
115 Ga0207694_10059367 3300025924 Unclassified 2974
116 Ga0207694_10153235 3300025924 Bacteria 1858
117 Ga0207687_10000314 3300025927 Bacteria 33026
118 Ga0207687_10006209 3300025927 Bacteria 7914
119 Ga0207687_10011906 3300025927 Bacteria 5689
120 Ga0207687_10023565 3300025927 Bacteria 4105
121 Ga0207687_10038754 3300025927 Bacteria 3259
122 Ga0207700_10026818 3300025928 Bacteria 4024
123 Ga0207700_10050712 3300025928 Unclassified 3094
124 Ga0207700_10093625 3300025928 Unclassified 2378
125 Ga0207664_10016107 3300025929 Bacteria 5446
126 Ga0207706_10061735 3300025933 Unclassified 3300
127 Ga0207686_10022523 3300025934 Bacteria 3629
128 Ga0207711_10002440 3300025941 Bacteria 16590
129 Ga0207711_10006700 3300025941 Bacteria 9692
130 Ga0207661_10000525 3300025944 Bacteria 24741
131 Ga0207661_10004343 3300025944 Bacteria 9926
132 Ga0207661_10074172 3300025944 Bacteria 2788
133 Ga0207667_10000369 3300025949 Bacteria 60858
134 Ga0207667_10000650 3300025949 Bacteria 45011
135 Ga0207667_10003720 3300025949 Bacteria 18808
136 Ga0207667_10040895 3300025949 Bacteria 4934
137 Ga0207639_10065426 3300026041 Unclassified 2822
138 Ga0207702_10041918 3300026078 Bacteria 3838
139 Ga0207648_10043039 3300026089 Unclassified 3965
140 Ga0207676_10095308 3300026095 Unclassified 2454
141 Ga0207674_10000484 3300026116 Bacteria 52530
142 Ga0207674_10073650 3300026116 Unclassified 3428
143 Ga0207674_10083982 3300026116 Bacteria 3183
144 Ga0268266_10055949 3300028379 Unclassified 3393
145 Ga0268266_10062756 3300028379 Unclassified 3208
146 Ga0265775_100016 3300030762 Bacteria 5340
147 Ga0265777_100060 3300030877 Unclassified 3504
148 Ga0265777_100082 3300030877 Bacteria 3149
149 Ga0265777_100163 3300030877 Bacteria 2590
150 Ga0265331_10013882 3300031250 Bacteria 4310
151 Ga0265316_10036546 3300031344 Bacteria 3971
152 Ga0265313_10011600 3300031595 Bacteria 5466
153 Ga0316579_10004160 3300031691 Bacteria 5719
154 Ga0265314_10005410 3300031711 Bacteria 11536
155 Ga0265314_10023935 3300031711 Bacteria 4642
156 Ga0265314_10060041 3300031711 Bacteria 2597
157 Ga0373926_0016025 3300035083 Bacteria 2560
158 Ga0373935_0060197 3300035692 Bacteria 2429
159 Ga0373935_0107693 3300035692 Bacteria 1846
160 Ga0373927_0000716 3300035695 Bacteria 25368
161 Ga0373927_0002103 3300035695 Bacteria 14698
162 Ga0373947_0000624 3300035725 Bacteria 20934
163 Ga0373937_0001592 3300036401 Bacteria 19082
164 Ga0373937_0010723 3300036401 Bacteria 8016
165 Ga0373937_0014078 3300036401 Bacteria 7054
166 Ga0373937_0014644 3300036401 Bacteria 6925
167 Ga0373937_0037824 3300036401 Bacteria 4398
168 Ga0265778_000164 3300036457 Bacteria 4533
169 Ga0265778_000204 3300036457 Bacteria 4170
170 Ga0265778_000233 3300036457 Bacteria 4008
171 Ga0265778_000296 3300036457 Bacteria 3719
172 Ga0265778_000398 3300036457 Unclassified 3379
173 Ga0265778_000702 3300036457 Bacteria 2742
174 Ga0265778_000768 3300036457 Unclassified 2659
175 Ga0373925_0000410 3300037068 Bacteria 43630
176 Ga0373925_0003696 3300037068 Bacteria 11752
177 Ga0395898_0177972 3300037466 Bacteria 2033
178 Ga0436364_1127322 3300037853 Bacteria 3604
179 Ga0436363_0857191 3300039450 Bacteria 10008
180 Ga0436363_0994947 3300039450 Bacteria 4770
181 Ga0436362_0329290 3300039453 Bacteria 7610
182 Ga0466969_0003845 3300044656 Bacteria 7972
183 Ga0495592_0058640 3300046454 Bacteria 2838
184 Ga0495651_0018386 3300046462 Bacteria 5413
185 Ga0495653_0028877 3300046463 Bacteria 4434
186 Ga0495580_0017428 3300046472 Bacteria 5373
187 Ga0495580_0019959 3300046472 Bacteria 4968
188 Ga0495580_0034630 3300046472 Bacteria 3635
189 Ga0495662_0007244 3300046476 Bacteria 5491
190 Ga0495664_0001520 3300046477 Bacteria 12275
191 Ga0495594_0078418 3300046499 Bacteria 1843
192 Ga0495665_0022833 3300046531 Unclassified 3360
193 Ga0495640_0017494 3300046533 Bacteria 5342
194 Ga0495586_0018633 3300046535 Bacteria 3696
195 Ga0495587_0003361 3300046536 Bacteria 10667
196 Ga0495645_0004964 3300046543 Bacteria 9106
197 Ga0495634_0042958 3300046642 Bacteria 3064
198 Ga0495635_0033559 3300046663 Bacteria 3560
199 Ga0495657_0060150 3300046675 Bacteria 2518
200 Ga0495599_0002202 3300046678 Bacteria 11332
201 Ga0495599_0004563 3300046678 Bacteria 8210
202 Ga0495646_0007361 3300046680 Bacteria 6994
203 Ga0495613_0139003 3300046689 Bacteria 1736
204 Ga0495600_0011992 3300046809 Bacteria 5411
205 Ga0495604_0040132 3300047317 Bacteria 3676
206 Ga0495674_0012944 3300047319 Bacteria 7854
207 Ga0495680_0042334 3300047322 Bacteria 3615
208 Ga0495680_0046185 3300047322 Bacteria 3435
209 Ga0495684_0044158 3300047471 Bacteria 3412
210 Ga0495602_0016198 3300048088 Bacteria 7500
211 Ga0105240_10026472
212 Ga0070683_100000668
213 Ga0070683_100000673
214 Ga0070683_100006260
215 Ga0070683_100123598
216 Ga0070680_100004856
217 Ga0070660_100022985
218 Ga0070691_10011219
219 Ga0070673_100036789
220 Ga0070673_100048589
221 Ga0070714_100002952
222 Ga0070714_100005934
223 Ga0070713_100002556
224 Ga0070713_100014567
225 Ga0070713_100034259
226 Ga0070713_100079209
227 Ga0070711_100074877
228 Ga0070678_100048377
229 Ga0070681_10010272
230 Ga0070681_10053222
231 Ga0070681_10092836
232 Ga0070706_100002669
233 Ga0070706_100144068
234 Ga0070707_100001057
235 Ga0070707_100018673
236 Ga0070679_100014983
237 Ga0070679_100136122
238 Ga0070684_100000386
239 Ga0070684_100000607
240 Ga0070684_100006826
241 Ga0070684_100043374
242 Ga0070684_100148077
243 Ga0068853_100049467
244 Ga0070695_100021293
245 Ga0070665_100062055
246 Ga0068855_100006040
247 Ga0068855_100051185
248 Ga0068855_100077606
249 Ga0068855_100187072
250 Ga0068857_100001338
251 Ga0068854_100034008
252 Ga0068856_100001575
253 Ga0068859_100097199
254 Ga0068863_100078291
255 Ga0068858_100079772
256 Ga0068858_100098173
257 Ga0070717_10049482
258 Ga0070717_10056024
259 Ga0097621_100011994
260 Ga0097621_100013742
261 Ga0068871_100003969
262 Ga0068871_100105850
263 Ga0097620_100097198
264 Ga0105240_10001609
265 Ga0105240_10005118
266 Ga0105240_10005652
267 Ga0105240_10046834
268 Ga0105240_10116671
269 Ga0105245_10000655
270 Ga0105245_10028874
271 Ga0105245_10040420
272 Ga0105243_10181770
273 Ga0105241_10023317
274 Ga0105242_10010800
275 Ga0105242_10164316
276 Ga0105248_10013155
277 Ga0105248_10016190
278 Ga0105248_10053683
279 Ga0105237_10008460
280 Ga0105238_10000444
281 Ga0105238_10067794
282 Ga0105238_10087923
283 Ga0105249_10009510
284 Ga0105239_10001243
285 Ga0105239_10006349
286 Ga0105239_10016050
287 Ga0105246_10044931
288 Ga0157370_10003244
289 Ga0157369_10000695
290 Ga0157369_10001088
291 Ga0157369_10108404
292 Ga0157378_10002861
293 Ga0163162_10175781
294 Ga0157372_10002038
295 Ga0157372_10008903
296 Ga0157372_10028266
297 Ga0157372_10037321
298 Ga0157372_10078967
299 Ga0157375_10005389
300 Ga0163163_10020764
301 Ga0163163_10120370
302 Ga0157379_10071667
303 Ga0213874_10010922
304 Ga0247553_100059
305 Ga0207653_10018566
306 Ga0207692_10050326
307 Ga0207699_10045427
308 Ga0207684_10006399
309 Ga0207684_10008037
310 Ga0207684_10081320
311 Ga0207684_10088540
312 Ga0207654_10002357
313 Ga0207654_10033908
314 Ga0207707_10001348
315 Ga0207695_10001123
316 Ga0207695_10002767
317 Ga0207695_10027055
318 Ga0207695_10048015
319 Ga0207660_10008380
320 Ga0207652_10034684
321 Ga0207646_10015427
322 Ga0207646_10032341
323 Ga0207646_10037362
324 Ga0207694_10000170
325 Ga0207694_10059367
326 Ga0207694_10153235
327 Ga0207687_10000314
328 Ga0207687_10006209
329 Ga0207687_10011906
330 Ga0207687_10023565
331 Ga0207687_10038754
332 Ga0207700_10026818
333 Ga0207700_10050712
334 Ga0207700_10093625
335 Ga0207664_10016107
336 Ga0207706_10061735
337 Ga0207686_10022523
338 Ga0207711_10002440
339 Ga0207711_10006700
340 Ga0207661_10000525
341 Ga0207661_10004343
342 Ga0207661_10074172
343 Ga0207667_10000369
344 Ga0207667_10000650
345 Ga0207667_10003720
346 Ga0207667_10040895
347 Ga0207639_10065426
348 Ga0207702_10041918
349 Ga0207648_10043039
350 Ga0207676_10095308
351 Ga0207674_10000484
352 Ga0207674_10073650
353 Ga0207674_10083982
354 Ga0268266_10055949
355 Ga0268266_10062756
356 Ga0265775_100016
357 Ga0265777_100060
358 Ga0265777_100082
359 Ga0265777_100163
360 Ga0265331_10013882
361 Ga0265316_10036546
362 Ga0265313_10011600
363 Ga0316579_10004160
364 Ga0265314_10005410
365 Ga0265314_10023935
366 Ga0265314_10060041
367 Ga0373926_0016025
368 Ga0373935_0060197
369 Ga0373935_0107693
370 Ga0373927_0000716
371 Ga0373927_0002103
372 Ga0373947_0000624
373 Ga0373937_0001592
374 Ga0373937_0010723
375 Ga0373937_0014078
376 Ga0373937_0014644
377 Ga0373937_0037824
378 Ga0265778_000164
379 Ga0265778_000204
380 Ga0265778_000233
381 Ga0265778_000296
382 Ga0265778_000398
383 Ga0265778_000702
384 Ga0265778_000768
385 Ga0373925_0000410
386 Ga0373925_0003696
387 Ga0395898_0177972
388 Ga0436364_1127322
389 Ga0436363_0857191
390 Ga0436363_0994947
391 Ga0436362_0329290
392 Ga0466969_0003845
393 Ga0495592_0058640
394 Ga0495651_0018386
395 Ga0495653_0028877
396 Ga0495580_0017428
397 Ga0495580_0019959
398 Ga0495580_0034630
399 Ga0495662_0007244
400 Ga0495664_0001520
401 Ga0495594_0078418
402 Ga0495665_0022833
403 Ga0495640_0017494
404 Ga0495586_0018633
405 Ga0495587_0003361
406 Ga0495645_0004964
407 Ga0495634_0042958
408 Ga0495635_0033559
409 Ga0495657_0060150
410 Ga0495599_0002202
411 Ga0495599_0004563
412 Ga0495646_0007361
413 Ga0495613_0139003
414 Ga0495600_0011992
415 Ga0495604_0040132
416 Ga0495674_0012944
417 Ga0495680_0042334
418 Ga0495680_0046185
419 Ga0495684_0044158
420 Ga0495602_0016198

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00390

malic

Malic enzyme, N-terminal domain

123

305

0.99

PF03949

Malic_M

Malic enzyme, NAD binding domain

315

576

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pjl-assembly1.cif.gz_B crystal structure of human m-nad-me in ternary complex with nad and lu3+ 0.8788 29 560
6c7n-assembly1.cif.gz_B monoclinic form of malic enzyme from sorghum at 2 angstroms resolution 0.8759 25 564
6urf-assembly2.cif.gz_D malic enzyme from mycobacterium tuberculosis 0.8745 34 559
6urf-assembly1.cif.gz_A malic enzyme from mycobacterium tuberculosis 0.872 32 560
2aw5-assembly1.cif.gz_A crystal structure of a human malic enzyme 0.8715 30 560
ID Description Score Start End Superfamily
1llqA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9588 284 481 3.40.50.720
1llqA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9538 284 481 3.40.50.720
af_Q8L7K9_301_607_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9114 284 534 3.40.50.720
af_A0A0R0IXY2_259_396_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9099 284 425 3.40.50.720
af_P9WK25_263_548_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9094 284 560 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A822CZ03-F1-model_v4 Malic enzyme NAD-binding domain-containing protein 0.9735 394 506 GO:0004473
GO:0005739
GO:0006090
GO:0006108
GO:0051287
AF-A0A376F8M9-F1-model_v4 NAD-dependent malic enzyme (EC 1.1.1.38) 0.9654 293 472 GO:0004471
GO:0005829
GO:0006090
GO:0006108
GO:0008948
GO:0046872
GO:0051287
AF-A0A1H0DPV1-F1-model_v4 Malate dehydrogenase (Oxaloacetate-decarboxylating) 0.965 307 492 GO:0004470
GO:0006090
GO:0006108
GO:0016616
GO:0046872
GO:0051287
AF-A0A0M3J9T3-F1-model_v4 Malic enzyme (inferred by orthology to a C. elegans protein) 0.9574 300 493 GO:0004473
GO:0005739
GO:0006090
GO:0006108
GO:0051287
AF-A0A7J6A4M1-F1-model_v4 Malic enzyme NAD-binding domain-containing protein 0.9566 309 507 GO:0004473
GO:0005739
GO:0006090
GO:0006108
GO:0051287

Map