F316209

General Info

Members Datasets Scaffolds Average Seq Length
207 147 207 397

Family's Representative Sequence

Representative Sequence 3300005547|Ga0070693_100001579|Ga0070693_1000015799
Length 422
Sequence MTVDGPKTHGIGGEIGPSGPVQRVGVVGAGTMGAGIAQVAALGGYETRLHDPVPAALEAANDRLHRGLAKGATNGLWSEDDAEAAGDRVGAAPNLADLCECDLVIEAAPEDLALKRRLFADLATICGTHAILATNTSSLPVTDVAAEVPGRERVVGMHFFNPPALMKLVEVVATADSSTVALEAATEVGVRMGRTPIRARDCPGFIANRLARPFSLESLRMLAAGVADAQTIDRVCRGVGFRMGPFELIDLIGLDVNLSVARSFYAQGGEPERWRPSPIQEALVAKGDLGRKSGRGFYDYSDPPLTVSPVPSHRIARERSGGNGELTLDPEELAAIDPAAPAIVPRLVAQIANEAAFALEEEVGSPADMDTAMRLGFNWPRGPIELTELIGAGRAAELLEELRAVKGEAYAPAPGLVAAAGR

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
77 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
85 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
86 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
87 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
115 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
146 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
147 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.45
Nodule 0
Rhizoplane 11.59
Rhizosphere 86.47
Stem 0
Stem Tuber 0
Unclassified 0.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000002 3300001977 Bacteria 25663
2 JGI24034J26672_10000239 3300002239 Bacteria 7237
3 JGI24751J29686_10006905 3300002459 Bacteria 2315
4 Ga0070683_100055271 3300005329 Bacteria 3684
5 Ga0070683_100160246 3300005329 Bacteria 2135
6 Ga0070670_100125333 3300005331 Bacteria 2217
7 Ga0070677_10000144 3300005333 Bacteria 24154
8 Ga0070682_100000023 3300005337 Bacteria 206016
9 Ga0068868_100000694 3300005338 Bacteria 22626
10 Ga0070691_10000004 3300005341 Bacteria 80156
11 Ga0070691_10003849 3300005341 Bacteria 6781
12 Ga0070674_100000141 3300005356 Bacteria 33366
13 Ga0070673_100004143 3300005364 Bacteria 9131
14 Ga0070711_100050874 3300005439 Bacteria 2843
15 Ga0070700_100045055 3300005441 Bacteria 2719
16 Ga0070662_100000001 3300005457 Bacteria 317995
17 Ga0070681_10159665 3300005458 Bacteria 2178
18 Ga0068867_100000078 3300005459 Bacteria 59729
19 Ga0070679_100000424 3300005530 Bacteria 35927
20 Ga0070684_100007312 3300005535 Bacteria 8582
21 Ga0070684_100059479 3300005535 Bacteria 3341
22 Ga0070684_100114410 3300005535 Bacteria 2422
23 Ga0068853_100108723 3300005539 Bacteria 2460
24 Ga0070693_100001579 3300005547 Bacteria 10264
25 Ga0070665_100000022 3300005548 Bacteria 379286
26 Ga0068854_100031004 3300005578 Bacteria 3713
27 Ga0068856_100005657 3300005614 Bacteria 12302
28 Ga0068856_100018969 3300005614 Bacteria 6674
29 Ga0068866_10000004 3300005718 Bacteria 202810
30 Ga0068866_10004817 3300005718 Bacteria 5540
31 Ga0068870_10044920 3300005840 Bacteria 2310
32 Ga0068863_100000261 3300005841 Bacteria 55053
33 Ga0068863_100008832 3300005841 Bacteria 9842
34 Ga0068858_100000046 3300005842 Bacteria 127519
35 Ga0068858_100001180 3300005842 Bacteria 27065
36 Ga0068860_100003017 3300005843 Bacteria 17389
37 Ga0070715_10000008 3300006163 Bacteria 189899
38 Ga0075433_10000337 3300006852 Bacteria 29062
39 Ga0075433_10048608 3300006852 Bacteria 3689
40 Ga0105245_10000040 3300009098 Bacteria 144005
41 Ga0105245_10000629 3300009098 Bacteria 32084
42 Ga0105247_10000131 3300009101 Bacteria 72578
43 Ga0105242_10000063 3300009176 Bacteria 74721
44 Ga0105242_10000428 3300009176 Bacteria 33565
45 Ga0105238_10000033 3300009551 Bacteria 172981
46 Ga0105249_10000218 3300009553 Bacteria 65480
47 Ga0105239_10083154 3300010375 Bacteria 3525
48 Ga0157370_10004940 3300013104 Bacteria 15093
49 Ga0157374_10001719 3300013296 Bacteria 18377
50 Ga0157374_10062372 3300013296 Bacteria 3494
51 Ga0157375_10000492 3300013308 Bacteria 35821
52 Ga0157375_10030090 3300013308 Bacteria 5115
53 Ga0157375_10059847 3300013308 Bacteria 3775
54 Ga0157380_10000310 3300014326 Bacteria 29448
55 Ga0163161_10000027 3300017792 Bacteria 197774
56 Ga0163161_10088854 3300017792 Bacteria 2284
57 Ga0207682_10000012 3300025893 Bacteria 84521
58 Ga0207642_10000005 3300025899 Bacteria 401934
59 Ga0207642_10003444 3300025899 Bacteria 4997
60 Ga0207710_10000268 3300025900 Bacteria 42956
61 Ga0207685_10000012 3300025905 Bacteria 189900
62 Ga0207707_10023616 3300025912 Bacteria 5378
63 Ga0207663_10105863 3300025916 Bacteria 1900
64 Ga0207652_10002317 3300025921 Bacteria 16136
65 Ga0207694_10000012 3300025924 Bacteria 411218
66 Ga0207650_10068224 3300025925 Bacteria 2670
67 Ga0207687_10000046 3300025927 Bacteria 99576
68 Ga0207687_10000095 3300025927 Bacteria 64664
69 Ga0207706_10000003 3300025933 Bacteria 345011
70 Ga0207686_10000124 3300025934 Bacteria 62335
71 Ga0207686_10000395 3300025934 Bacteria 30349
72 Ga0207669_10000021 3300025937 Bacteria 100327
73 Ga0207661_10002170 3300025944 Bacteria 13522
74 Ga0207661_10008953 3300025944 Bacteria 7168
75 Ga0207651_10000493 3300025960 Bacteria 16585
76 Ga0207712_10000027 3300025961 Bacteria 263739
77 Ga0207640_10012101 3300025981 Bacteria 4904
78 Ga0207677_10001111 3300026023 Bacteria 14662
79 Ga0207703_10000020 3300026035 Bacteria 251603
80 Ga0207703_10000042 3300026035 Bacteria 161459
81 Ga0207708_10065672 3300026075 Bacteria 2774
82 Ga0207702_10008909 3300026078 Bacteria 8458
83 Ga0207702_10018333 3300026078 Bacteria 5790
84 Ga0207641_10000062 3300026088 Bacteria 159982
85 Ga0207641_10006453 3300026088 Bacteria 9884
86 Ga0207648_10001238 3300026089 Bacteria 28690
87 Ga0207675_100065894 3300026118 Bacteria 3385
88 Ga0268266_10000029 3300028379 Bacteria 424015
89 Ga0268264_10001191 3300028381 Bacteria 25160
90 Ga0265337_1001256 3300028556 Bacteria 12773
91 Ga0265326_10000127 3300028558 Bacteria 39017
92 Ga0265319_1000010 3300028563 Bacteria 188773
93 Ga0265322_10000005 3300028654 Bacteria 246112
94 Ga0265338_10000287 3300028800 Bacteria 90818
95 Ga0265324_10000264 3300029957 Bacteria 39067
96 Ga0307511_10062260 3300030521 Bacteria 2834
97 Ga0265320_10000010 3300031240 Bacteria 250501
98 Ga0265325_10015270 3300031241 Bacteria 4322
99 Ga0265329_10001050 3300031242 Bacteria 13701
100 Ga0265339_10028796 3300031249 Bacteria 3156
101 Ga0265331_10000217 3300031250 Bacteria 69142
102 Ga0265327_10000040 3300031251 Bacteria 291052
103 Ga0265314_10000491 3300031711 Bacteria 51373
104 Ga0373937_0009257 3300036401 Bacteria 8551
105 Ga0466963_0000233 3300044694 Bacteria 24036
106 Ga0495592_0000024 3300046454 Bacteria 136661
107 Ga0495592_0049933 3300046454 Bacteria 3109
108 Ga0495603_0000102 3300046455 Bacteria 40074
109 Ga0495603_0001271 3300046455 Bacteria 14685
110 Ga0495603_0001546 3300046455 Bacteria 13471
111 Ga0495629_0051041 3300046459 Bacteria 2895
112 Ga0495629_0066608 3300046459 Bacteria 2514
113 Ga0495641_0000004 3300046461 Bacteria 210501
114 Ga0495651_0194217 3300046462 Bacteria 1426
115 Ga0495653_0067891 3300046463 Bacteria 2676
116 Ga0495653_0075162 3300046463 Bacteria 2515
117 Ga0495582_0000003 3300046473 Bacteria 168880
118 Ga0495662_0000027 3300046476 Bacteria 52057
119 Ga0495662_0019658 3300046476 Bacteria 3268
120 Ga0495608_0000661 3300046511 Bacteria 23772
121 Ga0495618_0000267 3300046514 Bacteria 37924
122 Ga0495620_0000041 3300046515 Bacteria 112605
123 Ga0495628_0000794 3300046516 Bacteria 29108
124 Ga0495628_0035377 3300046516 Bacteria 4014
125 Ga0495628_0077632 3300046516 Bacteria 2583
126 Ga0495630_0012331 3300046517 Bacteria 6203
127 Ga0495644_0000158 3300046523 Bacteria 32233
128 Ga0495652_0017610 3300046529 Bacteria 6374
129 Ga0495640_0076794 3300046533 Bacteria 2228
130 Ga0495586_0000254 3300046535 Bacteria 35015
131 Ga0495587_0000272 3300046536 Bacteria 36939
132 Ga0495587_0125087 3300046536 Bacteria 1471
133 Ga0495598_0005937 3300046537 Bacteria 2732
134 Ga0495645_0023278 3300046543 Bacteria 4485
135 Ga0495645_0083747 3300046543 Bacteria 2285
136 Ga0495645_0118928 3300046543 Bacteria 1862
137 Ga0495633_0018113 3300046558 Bacteria 3582
138 Ga0495667_0000038 3300046559 Bacteria 131349
139 Ga0495634_0000002 3300046642 Bacteria 247842
140 Ga0495634_0001691 3300046642 Bacteria 19214
141 Ga0495634_0097544 3300046642 Bacteria 1902
142 Ga0495634_0210392 3300046642 Bacteria 1204
143 Ga0495635_0000005 3300046663 Bacteria 302178
144 Ga0495635_0020884 3300046663 Bacteria 4562
145 Ga0495657_0008787 3300046675 Bacteria 7699
146 Ga0495647_0000005 3300046681 Bacteria 125996
147 Ga0495647_0001602 3300046681 Bacteria 6990
148 Ga0495658_0000001 3300046683 Bacteria 385362
149 Ga0495669_0000483 3300046684 Bacteria 18439
150 Ga0495613_0000021 3300046689 Bacteria 159188
151 Ga0495624_0000123 3300046690 Bacteria 54291
152 Ga0495624_0017856 3300046690 Bacteria 4754
153 Ga0495670_0010248 3300046691 Bacteria 4605
154 Ga0495649_0004688 3300046694 Bacteria 8878
155 Ga0495604_0000100 3300047317 Bacteria 72995
156 Ga0495680_0000007 3300047322 Bacteria 152053
157 Ga0495680_0000929 3300047322 Bacteria 32526
158 Ga0495680_0001001 3300047322 Bacteria 31451
159 Ga0495680_0074839 3300047322 Bacteria 2571
160 Ga0495679_013887 3300047446 Bacteria 3004
161 Ga0495602_0006995 3300048088 Bacteria 11843
162 Ga0496100_0000024 3300048903 Bacteria 116138
163 Ga0496101_0000072 3300048904 Bacteria 116138
164 Ga0496102_0000749 3300048905 Bacteria 31723
165 Ga0496103_0000481 3300048906 Bacteria 33518
166 Ga0496104_0000008 3300048907 Bacteria 516976
167 Ga0496104_0000010 3300048907 Bacteria 475255
168 Ga0496104_0000579 3300048907 Bacteria 31244
169 Ga0496105_0000003 3300048908 Bacteria 713251
170 Ga0496105_0000005 3300048908 Bacteria 475797
171 Ga0496105_0000051 3300048908 Bacteria 90365
172 Ga0496106_0000040 3300048909 Bacteria 108754
173 Ga0496106_0000042 3300048909 Bacteria 106662
174 Ga0496107_0000025 3300048910 Bacteria 116138
175 Ga0496108_0000004 3300048911 Bacteria 545055
176 Ga0496109_0000013 3300048912 Bacteria 227469
177 Ga0496109_0148100 3300048912 Bacteria 2197
178 Ga0496111_0318592 3300048914 Bacteria 1152
179 Ga0496112_0000026 3300048915 Bacteria 144758
180 Ga0496112_0019553 3300048915 Bacteria 6395
181 Ga0496113_0056970 3300048916 Bacteria 2935
182 Ga0496113_0139701 3300048916 Bacteria 1905
183 Ga0496114_0000003 3300048917 Bacteria 630981
184 Ga0496115_0001530 3300048918 Bacteria 16611
185 Ga0496115_0115281 3300048918 Bacteria 2209
186 Ga0501042_0018214 3300049578 Bacteria 4860
187 Ga0501070_0109447 3300049586 Bacteria 2283
188 Ga0501075_0006816 3300049591 Bacteria 7886
189 Ga0501081_0090076 3300049743 Bacteria 2156
190 Ga0501081_0135552 3300049743 Bacteria 1762
191 nmdc:mga0a205_4_c1 3300050515 Bacteria 168154
192 nmdc:mga0a205_6195_c1 3300050515 Bacteria 10796
193 Ga0495601_0000318 3300053077 Bacteria 25520
194 Ga0495601_0048045 3300053077 Bacteria 2688
195 Ga0495601_0078844 3300053077 Bacteria 2111
196 Ga0495612_0000155 3300053078 Bacteria 28711
197 Ga0495612_0001782 3300053078 Bacteria 8820
198 Ga0495612_0012146 3300053078 Bacteria 3470
199 Ga0495655_0000005 3300053083 Bacteria 257472
200 Ga0495595_0000081 3300053084 Bacteria 45872
201 Ga0495619_0000001 3300053085 Bacteria 586054
202 Ga0495619_0000127 3300053085 Bacteria 55995
203 Ga0495619_0000346 3300053085 Bacteria 32476
204 Ga0495619_0013531 3300053085 Bacteria 5141
205 Ga0500566_0001830 3300053094 Bacteria 12505
206 Ga0500614_000161 3300053123 Bacteria 16919
207 Ga0500628_000013 3300053129 Bacteria 106419

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048914 Ga0496111_0318592 Ga0496111_0318592_56_1045 326
2 3300005441 Ga0070700_100045055 Ga0070700_1000450553 338
3 3300026075 Ga0207708_10065672 Ga0207708_100656722 338
4 3300049586 Ga0501070_0109447 Ga0501070_0109447_221_1327 353
5 3300017792 Ga0163161_10088854 Ga0163161_100888542 354
6 3300009101 Ga0105247_10000131 Ga0105247_1000013153 357
7 3300025900 Ga0207710_10000268 Ga0207710_1000026828 357
8 3300009176 Ga0105242_10000428 Ga0105242_1000042824 360
9 3300025934 Ga0207686_10000395 Ga0207686_1000039511 360
10 3300046461 Ga0495641_0000004 Ga0495641_0000004_66799_68025 360
11 3300053123 Ga0500614_000161 Ga0500614_000161_1736_2962 360
12 3300046663 Ga0495635_0020884 Ga0495635_0020884_1480_2679 362
13 3300053085 Ga0495619_0000346 Ga0495619_0000346_7540_8739 362
14 3300028563 Ga0265319_1000010 Ga0265319_100001034 366
15 3300028800 Ga0265338_10000287 Ga0265338_1000028775 366
16 3300031241 Ga0265325_10015270 Ga0265325_100152704 366
17 3300046642 Ga0495634_0210392 Ga0495634_0210392_27_1178 366
18 3300053077 Ga0495601_0000318 Ga0495601_0000318_14904_16130 366
19 3300046543 Ga0495645_0118928 Ga0495645_0118928_569_1741 374
20 3300025927 Ga0207687_10000046 Ga0207687_1000004619 375
21 3300009098 Ga0105245_10000629 Ga0105245_1000062918 376
22 3300013308 Ga0157375_10059847 Ga0157375_100598472 376
23 3300014326 Ga0157380_10000310 Ga0157380_1000031032 376
24 3300046455 Ga0495603_0001546 Ga0495603_0001546_87_1268 376
25 3300046642 Ga0495634_0001691 Ga0495634_0001691_8047_9237 376
26 3300046694 Ga0495649_0004688 Ga0495649_0004688_7665_8843 376
27 3300047446 Ga0495679_013887 Ga0495679_013887_1773_2951 376
28 3300005341 Ga0070691_10000004 Ga0070691_1000000412 377
29 3300053077 Ga0495601_0078844 Ga0495601_0078844_510_1739 377
30 3300049743 Ga0501081_0135552 Ga0501081_0135552_562_1743 378
31 3300005843 Ga0068860_100003017 Ga0068860_10000301710 379
32 3300028381 Ga0268264_10001191 Ga0268264_1000119123 379
33 3300046681 Ga0495647_0000005 Ga0495647_0000005_102363_103577 379
34 3300048915 Ga0496112_0000026 Ga0496112_0000026_17416_18561 379
35 3300053077 Ga0495601_0048045 Ga0495601_0048045_1495_2673 379
36 3300048907 Ga0496104_0000010 Ga0496104_0000010_211195_212373 380
37 3300048908 Ga0496105_0000005 Ga0496105_0000005_211195_212373 380
38 3300005718 Ga0068866_10004817 Ga0068866_100048177 381
39 3300013104 Ga0157370_10004940 Ga0157370_1000494012 381
40 3300025899 Ga0207642_10003444 Ga0207642_100034442 381
41 3300046454 Ga0495592_0000024 Ga0495592_0000024_113299_114450 381
42 3300046463 Ga0495653_0075162 Ga0495653_0075162_1348_2499 381
43 3300046473 Ga0495582_0000003 Ga0495582_0000003_41752_42903 381
44 3300046476 Ga0495662_0000027 Ga0495662_0000027_48864_50015 381
45 3300046517 Ga0495630_0012331 Ga0495630_0012331_3872_5023 381
46 3300046535 Ga0495586_0000254 Ga0495586_0000254_21332_22519 381
47 3300046543 Ga0495645_0023278 Ga0495645_0023278_2891_4042 381
48 3300046681 Ga0495647_0001602 Ga0495647_0001602_3269_4420 381
49 3300046683 Ga0495658_0000001 Ga0495658_0000001_129508_130659 381
50 3300046689 Ga0495613_0000021 Ga0495613_0000021_152867_154018 381
51 3300047322 Ga0495680_0000007 Ga0495680_0000007_118196_119347 381
52 3300049578 Ga0501042_0018214 Ga0501042_0018214_1953_3104 381
53 3300053084 Ga0495595_0000081 Ga0495595_0000081_4893_6044 381
54 3300005329 Ga0070683_100160246 Ga0070683_1001602461 382
55 3300005364 Ga0070673_100004143 Ga0070673_1000041438 382
56 3300009176 Ga0105242_10000063 Ga0105242_1000006357 382
57 3300025934 Ga0207686_10000124 Ga0207686_100001248 382
58 3300025960 Ga0207651_10000493 Ga0207651_1000049318 382
59 3300026118 Ga0207675_100065894 Ga0207675_1000658942 382
60 3300036401 Ga0373937_0009257 Ga0373937_0009257_7080_8279 383
61 3300047322 Ga0495680_0074839 Ga0495680_0074839_1166_2365 383
62 3300048088 Ga0495602_0006995 Ga0495602_0006995_6842_8038 383
63 3300010375 Ga0105239_10083154 Ga0105239_100831542 385
64 3300049591 Ga0501075_0006816 Ga0501075_0006816_689_1909 386
65 3300005333 Ga0070677_10000144 Ga0070677_100001444 387
66 3300009553 Ga0105249_10000218 Ga0105249_1000021825 387
67 3300025893 Ga0207682_10000012 Ga0207682_10000012100 387
68 3300025961 Ga0207712_10000027 Ga0207712_10000027218 387
69 3300046516 Ga0495628_0035377 Ga0495628_0035377_1404_2624 387
70 3300047322 Ga0495680_0000929 Ga0495680_0000929_11820_13031 387
71 3300048911 Ga0496108_0000004 Ga0496108_0000004_479644_480861 387
72 3300048912 Ga0496109_0000013 Ga0496109_0000013_162085_163302 387
73 3300002459 JGI24751J29686_10006905 JGI24751J29686_100069052 388
74 3300005338 Ga0068868_100000694 Ga0068868_1000006942 388
75 3300005457 Ga0070662_100000001 Ga0070662_10000000169 388
76 3300005547 Ga0070693_100001579 Ga0070693_1000015799 388
77 3300009098 Ga0105245_10000040 Ga0105245_1000004048 388
78 3300025933 Ga0207706_10000003 Ga0207706_10000003260 388
79 3300026023 Ga0207677_10001111 Ga0207677_1000111114 388
80 3300046515 Ga0495620_0000041 Ga0495620_0000041_52604_53824 388
81 3300005329 Ga0070683_100055271 Ga0070683_1000552712 389
82 3300005337 Ga0070682_100000023 Ga0070682_100000023149 389
83 3300005458 Ga0070681_10159665 Ga0070681_101596652 389
84 3300005530 Ga0070679_100000424 Ga0070679_10000042425 389
85 3300005535 Ga0070684_100059479 Ga0070684_1000594791 389
86 3300005539 Ga0068853_100108723 Ga0068853_1001087232 389
87 3300005548 Ga0070665_100000022 Ga0070665_1000000223 389
88 3300005578 Ga0068854_100031004 Ga0068854_1000310043 389
89 3300005614 Ga0068856_100005657 Ga0068856_10000565711 389
90 3300005842 Ga0068858_100001180 Ga0068858_1000011803 389
91 3300006852 Ga0075433_10000337 Ga0075433_1000033712 389
92 3300025912 Ga0207707_10023616 Ga0207707_100236166 389
93 3300025921 Ga0207652_10002317 Ga0207652_1000231720 389
94 3300025927 Ga0207687_10000095 Ga0207687_1000009561 389
95 3300025944 Ga0207661_10008953 Ga0207661_100089535 389
96 3300025981 Ga0207640_10012101 Ga0207640_100121013 389
97 3300026035 Ga0207703_10000020 Ga0207703_1000002057 389
98 3300026078 Ga0207702_10018333 Ga0207702_100183335 389
99 3300028379 Ga0268266_10000029 Ga0268266_10000029446 389
100 3300046523 Ga0495644_0000158 Ga0495644_0000158_1921_3144 389
101 3300046537 Ga0495598_0005937 Ga0495598_0005937_234_1457 389
102 3300046558 Ga0495633_0018113 Ga0495633_0018113_565_1803 389
103 3300046684 Ga0495669_0000483 Ga0495669_0000483_6209_7432 389
104 3300046691 Ga0495670_0010248 Ga0495670_0010248_1414_2652 389
105 3300048903 Ga0496100_0000024 Ga0496100_0000024_62003_63226 389
106 3300048904 Ga0496101_0000072 Ga0496101_0000072_52913_54136 389
107 3300048907 Ga0496104_0000008 Ga0496104_0000008_112899_114167 389
108 3300048908 Ga0496105_0000003 Ga0496105_0000003_112899_114167 389
109 3300048909 Ga0496106_0000040 Ga0496106_0000040_54619_55842 389
110 3300048910 Ga0496107_0000025 Ga0496107_0000025_62003_63226 389
111 3300049743 Ga0501081_0090076 Ga0501081_0090076_204_1427 389
112 3300050515 nmdc:mga0a205_4_c1 nmdc:mga0a205_4_c1_134524_135735 389
113 3300053078 Ga0495612_0001782 Ga0495612_0001782_3911_5128 389
114 3300005842 Ga0068858_100000046 Ga0068858_10000004684 390
115 3300026035 Ga0207703_10000042 Ga0207703_1000004249 390
116 3300047317 Ga0495604_0000100 Ga0495604_0000100_56201_57382 390
117 3300053085 Ga0495619_0000001 Ga0495619_0000001_453390_454571 390
118 3300002239 JGI24034J26672_10000239 JGI24034J26672_100002397 391
119 3300005356 Ga0070674_100000141 Ga0070674_10000014119 391
120 3300005718 Ga0068866_10000004 Ga0068866_1000000420 391
121 3300006852 Ga0075433_10048608 Ga0075433_100486083 391
122 3300025899 Ga0207642_10000005 Ga0207642_10000005187 391
123 3300025937 Ga0207669_10000021 Ga0207669_1000002140 391
124 3300050515 nmdc:mga0a205_6195_c1 nmdc:mga0a205_6195_c1_1029_2210 391
125 3300005331 Ga0070670_100125333 Ga0070670_1001253332 392
126 3300025925 Ga0207650_10068224 Ga0207650_100682244 392
127 3300025944 Ga0207661_10002170 Ga0207661_100021709 392
128 3300046454 Ga0495592_0049933 Ga0495592_0049933_1004_2221 392
129 3300046529 Ga0495652_0017610 Ga0495652_0017610_925_2139 392
130 3300046543 Ga0495645_0083747 Ga0495645_0083747_313_1527 392
131 3300005535 Ga0070684_100114410 Ga0070684_1001144102 393
132 3300005614 Ga0068856_100018969 Ga0068856_1000189696 393
133 3300005840 Ga0068870_10044920 Ga0068870_100449203 393
134 3300005841 Ga0068863_100008832 Ga0068863_1000088327 393
135 3300013308 Ga0157375_10030090 Ga0157375_100300904 393
136 3300026078 Ga0207702_10008909 Ga0207702_100089096 393
137 3300026088 Ga0207641_10006453 Ga0207641_100064536 393
138 3300028556 Ga0265337_1001256 Ga0265337_100125616 393
139 3300028558 Ga0265326_10000127 Ga0265326_1000012710 393
140 3300028654 Ga0265322_10000005 Ga0265322_10000005175 393
141 3300029957 Ga0265324_10000264 Ga0265324_1000026445 393
142 3300031240 Ga0265320_10000010 Ga0265320_10000010221 393
143 3300031242 Ga0265329_10001050 Ga0265329_1000105014 393
144 3300031249 Ga0265339_10028796 Ga0265339_100287963 393
145 3300031250 Ga0265331_10000217 Ga0265331_1000021723 393
146 3300031251 Ga0265327_10000040 Ga0265327_1000004085 393
147 3300031711 Ga0265314_10000491 Ga0265314_1000049148 393
148 3300046455 Ga0495603_0000102 Ga0495603_0000102_15761_16978 393
149 3300046459 Ga0495629_0051041 Ga0495629_0051041_567_1763 393
150 3300046476 Ga0495662_0019658 Ga0495662_0019658_1567_2763 393
151 3300046516 Ga0495628_0077632 Ga0495628_0077632_227_1414 393
152 3300046559 Ga0495667_0000038 Ga0495667_0000038_51211_52428 393
153 3300046642 Ga0495634_0000002 Ga0495634_0000002_133367_134554 393
154 3300047322 Ga0495680_0001001 Ga0495680_0001001_25784_27001 393
155 3300048905 Ga0496102_0000749 Ga0496102_0000749_13054_14250 393
156 3300048906 Ga0496103_0000481 Ga0496103_0000481_25025_26221 393
157 3300048915 Ga0496112_0019553 Ga0496112_0019553_756_1943 393
158 3300048917 Ga0496114_0000003 Ga0496114_0000003_499215_500447 393
159 3300048918 Ga0496115_0001530 Ga0496115_0001530_12792_14024 393
160 3300048918 Ga0496115_0115281 Ga0496115_0115281_29_1246 393
161 3300053078 Ga0495612_0000155 Ga0495612_0000155_9758_10945 393
162 3300053083 Ga0495655_0000005 Ga0495655_0000005_249150_250346 393
163 3300053094 Ga0500566_0001830 Ga0500566_0001830_7044_8240 393
164 3300053129 Ga0500628_000013 Ga0500628_000013_7302_8498 393
165 3300005341 Ga0070691_10003849 Ga0070691_100038498 394
166 3300005439 Ga0070711_100050874 Ga0070711_1000508743 394
167 3300005459 Ga0068867_100000078 Ga0068867_10000007852 394
168 3300005535 Ga0070684_100007312 Ga0070684_1000073122 394
169 3300005841 Ga0068863_100000261 Ga0068863_1000002613 394
170 3300006163 Ga0070715_10000008 Ga0070715_1000000826 394
171 3300009551 Ga0105238_10000033 Ga0105238_10000033114 394
172 3300013296 Ga0157374_10001719 Ga0157374_100017193 394
173 3300013296 Ga0157374_10062372 Ga0157374_100623723 394
174 3300013308 Ga0157375_10000492 Ga0157375_1000049221 394
175 3300017792 Ga0163161_10000027 Ga0163161_100000276 394
176 3300025905 Ga0207685_10000012 Ga0207685_1000001226 394
177 3300025916 Ga0207663_10105863 Ga0207663_101058632 394
178 3300025924 Ga0207694_10000012 Ga0207694_10000012115 394
179 3300026088 Ga0207641_10000062 Ga0207641_10000062121 394
180 3300026089 Ga0207648_10001238 Ga0207648_1000123836 394
181 3300030521 Ga0307511_10062260 Ga0307511_100622602 394
182 3300044694 Ga0466963_0000233 Ga0466963_0000233_21725_22918 394
183 3300046455 Ga0495603_0001271 Ga0495603_0001271_14_1213 394
184 3300046459 Ga0495629_0066608 Ga0495629_0066608_105_1301 394
185 3300046462 Ga0495651_0194217 Ga0495651_0194217_153_1349 394
186 3300046463 Ga0495653_0067891 Ga0495653_0067891_1043_2263 394
187 3300046511 Ga0495608_0000661 Ga0495608_0000661_9597_10841 394
188 3300046514 Ga0495618_0000267 Ga0495618_0000267_25718_26908 394
189 3300046516 Ga0495628_0000794 Ga0495628_0000794_22289_23479 394
190 3300046533 Ga0495640_0076794 Ga0495640_0076794_961_2151 394
191 3300046536 Ga0495587_0000272 Ga0495587_0000272_27717_28955 394
192 3300046536 Ga0495587_0125087 Ga0495587_0125087_104_1294 394
193 3300046642 Ga0495634_0097544 Ga0495634_0097544_495_1685 394
194 3300046663 Ga0495635_0000005 Ga0495635_0000005_36850_38040 394
195 3300046675 Ga0495657_0008787 Ga0495657_0008787_5412_6656 394
196 3300046690 Ga0495624_0000123 Ga0495624_0000123_20323_21519 394
197 3300046690 Ga0495624_0017856 Ga0495624_0017856_1686_2876 394
198 3300048907 Ga0496104_0000579 Ga0496104_0000579_6583_7812 394
199 3300048908 Ga0496105_0000051 Ga0496105_0000051_82739_83968 394
200 3300048909 Ga0496106_0000042 Ga0496106_0000042_46116_47312 394
201 3300048912 Ga0496109_0148100 Ga0496109_0148100_716_1918 394
202 3300048916 Ga0496113_0056970 Ga0496113_0056970_12_1217 394
203 3300048916 Ga0496113_0139701 Ga0496113_0139701_215_1414 394
204 3300053078 Ga0495612_0012146 Ga0495612_0012146_891_2099 394
205 3300053085 Ga0495619_0000127 Ga0495619_0000127_14489_15688 394
206 3300053085 Ga0495619_0013531 Ga0495619_0013531_1587_2777 394
207 3300001977 JGI24746J21847_1000002 JGI24746J21847_100000234 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

204

300

0.99

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

23

202

0.99

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

343

420

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j36-assembly2.cif.gz_B cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9994 4 31
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9974 4 33
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9963 4 33
4j33-assembly2.cif.gz_B crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9951 4 33
4j31-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase (kmo-396prot) 0.993 4 31
ID Description Score Start End Superfamily
af_Q5VQP1_29_415_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.011 6 31 3.50.50.60
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9994 4 31 3.50.50.60
3kd9B02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9727 2 31 3.50.50.60
af_Q8S1G9_1_195_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9684 2 185 3.40.50.720
5ttkA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9665 5 36 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A367LZ43-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9891 98 278 GO:0006635
GO:0008691
GO:0070403
AF-A0A351Q0M1-F1-model_v4 deleted 0.9865 82 283
AF-A0A0L8QFE2-F1-model_v4 deleted 0.9865 69 152
AF-S9SX54-F1-model_v4 3-hydroxybutyryl-CoA dehydrogenase 0.9862 170 283 GO:0003857
GO:0006635
AF-A0A5P0JKP1-F1-model_v4 Fatty acid oxidation complex subunit alpha FadB (EC 1.1.1.35, EC 4.2.1.17, EC 5.1.2.3, EC 5.3.3.8) 0.982 85 239 GO:0004165
GO:0004300
GO:0006635
GO:0008692
GO:0016509
GO:0070403

Feature Viewer

pLDDT pTM Quality
94.04 0.9 High
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Predicted Structure (AlphaFold2)

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