F310472

General Info

Members Datasets Scaffolds Average Seq Length
202 129 202 450

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_40097_c1|nmdc:mga05p37_40097_c1_3413_5017
Length 534
Sequence VAEERVIVRVRVHGGNRHVPEEYNDCGVMRSALLVSTYEMGRQPFALASAAAWLRADGLVVTCVDAAKEKLTDTALCAADLIAFHLPMHTATRLAAPIITAARRLNRAARICAFGLYAPLNAEWLRSIGVDEVFGGEFEEDLAQWAGVTKAALKGCATSTDERSTQNTQSQSSXDERAGEKAALVAQPFPPPLAGNSSELRRDSPKRETREGGRAARALPRIHFLVPDRTGLPPLSKYATLQMPSGERRLVGYTEASRGCKHLCRHCPVVPIYNGQFRVVQPDVVLADIAGQVAAGAQHITFGDPDFFNGPTHALRIVDALHAAHPEVTYDATVKVEHLLRHRNLLPRLAATGCAFVISAVESLDNRVLARFDKGHTREDFFDAVEVCRACGVTLVPTFVAFHPWLSLESYCDLLATIARLDLIDHVAPIQLAIRLLVPEGSRLLTLDEMRAHIDRFDPVTLTYRWAHPDPRVDALQRDVTALVGMRLTTDRRALFSEIAALAHARAGVPAPAFDSRPARARATVPYLNEPWYC

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
129 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.43
Rhizosphere 92.08
Stem 0
Stem Tuber 0
Unclassified 0.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10059780 3300005327 Bacteria 3103
2 Ga0068869_100106316 3300005334 Bacteria 2129
3 Ga0070666_10033453 3300005335 Bacteria 3401
4 Ga0070680_100035835 3300005336 Bacteria 4007
5 Ga0070680_100089895 3300005336 Bacteria 2541
6 Ga0068868_100100383 3300005338 Unclassified 2342
7 Ga0070660_100005154 3300005339 Bacteria 9035
8 Ga0070689_100135829 3300005340 Bacteria 1975
9 Ga0070687_100010014 3300005343 Bacteria 4080
10 Ga0070669_100009732 3300005353 Bacteria 6848
11 Ga0070688_100048085 3300005365 Bacteria 2649
12 Ga0070667_100036253 3300005367 Bacteria 4134
13 Ga0070714_100028293 3300005435 Bacteria 4649
14 Ga0070708_100088975 3300005445 Bacteria 2809
15 Ga0070681_10039579 3300005458 Bacteria 4725
16 Ga0068867_100050373 3300005459 Bacteria 3069
17 Ga0070685_10064530 3300005466 Bacteria 2153
18 Ga0070706_100071398 3300005467 Bacteria 3211
19 Ga0070706_100218791 3300005467 Bacteria 1778
20 Ga0070707_100079668 3300005468 Unclassified 3162
21 Ga0070698_100003805 3300005471 Bacteria 16575
22 Ga0070699_100005625 3300005518 Bacteria 10990
23 Ga0070699_100038951 3300005518 Bacteria 4115
24 Ga0070699_100153219 3300005518 Bacteria 2039
25 Ga0070679_100002736 3300005530 Bacteria 16065
26 Ga0070679_100010950 3300005530 Bacteria 8619
27 Ga0070679_100098842 3300005530 Bacteria 2905
28 Ga0070679_100156041 3300005530 Bacteria 2257
29 Ga0070672_100075459 3300005543 Bacteria 2692
30 Ga0070696_100055608 3300005546 Bacteria 2760
31 Ga0070665_100008840 3300005548 Bacteria 10197
32 Ga0070665_100065631 3300005548 Bacteria 3640
33 Ga0068855_100037272 3300005563 Bacteria 5784
34 Ga0070702_100111920 3300005615 Bacteria 1694
35 Ga0068859_100221647 3300005617 Bacteria 1979
36 Ga0068864_100017324 3300005618 Bacteria 6005
37 Ga0068866_10017724 3300005718 Bacteria 3207
38 Ga0068866_10045646 3300005718 Unclassified 2199
39 Ga0068861_100040730 3300005719 Bacteria 3476
40 Ga0068863_100011899 3300005841 Bacteria 8408
41 Ga0068858_100037030 3300005842 Bacteria 4523
42 Ga0068860_100112215 3300005843 Bacteria 2607
43 Ga0068862_100061211 3300005844 Bacteria 3236
44 Ga0097621_100001349 3300006237 Bacteria 16887
45 Ga0097621_100002549 3300006237 Bacteria 12485
46 Ga0097621_100067878 3300006237 Bacteria 2939
47 Ga0068871_100001564 3300006358 Bacteria 15358
48 Ga0068871_100008356 3300006358 Bacteria 7444
49 Ga0068871_100015134 3300006358 Bacteria 5767
50 Ga0075434_100004360 3300006871 Bacteria 12739
51 Ga0075434_100109249 3300006871 Bacteria 2776
52 Ga0075436_100027917 3300006914 Bacteria 3885
53 Ga0075436_100029860 3300006914 Bacteria 3750
54 Ga0097620_100221637 3300006931 Bacteria 1979
55 Ga0075435_100020885 3300007076 Bacteria 5027
56 Ga0075435_100030607 3300007076 Bacteria 4234
57 Ga0075435_100175014 3300007076 Bacteria 1812
58 Ga0105240_10093038 3300009093 Bacteria 3680
59 Ga0111539_10019106 3300009094 Bacteria 8468
60 Ga0111539_10037500 3300009094 Bacteria 5852
61 Ga0111539_10057402 3300009094 Bacteria 4623
62 Ga0105245_10237823 3300009098 Bacteria 1764
63 Ga0114129_10002040 3300009147 Bacteria 27709
64 Ga0114129_10002681 3300009147 Bacteria 24774
65 Ga0114129_10006486 3300009147 Bacteria 16598
66 Ga0114129_10057089 3300009147 Bacteria 5465
67 Ga0114129_10059002 3300009147 Bacteria 5366
68 Ga0114129_10244598 3300009147 Unclassified 2411
69 Ga0105242_10001673 3300009176 Bacteria 17537
70 Ga0105242_10006458 3300009176 Bacteria 9029
71 Ga0105242_10035145 3300009176 Bacteria 4019
72 Ga0105242_10087003 3300009176 Bacteria 2623
73 Ga0105248_10005629 3300009177 Bacteria 13754
74 Ga0105248_10014313 3300009177 Bacteria 8730
75 Ga0105248_10034206 3300009177 Bacteria 5681
76 Ga0105248_10085976 3300009177 Bacteria 3538
77 Ga0105248_10113022 3300009177 Unclassified 3063
78 Ga0105248_10113168 3300009177 Bacteria 3060
79 Ga0157374_10014179 3300013296 Bacteria 6969
80 Ga0157378_10063473 3300013297 Bacteria 3300
81 Ga0163162_10027751 3300013306 Bacteria 5599
82 Ga0157372_10079113 3300013307 Bacteria 3717
83 Ga0157375_10065148 3300013308 Bacteria 3631
84 Ga0163163_10050035 3300014325 Bacteria 4114
85 Ga0163163_10055460 3300014325 Bacteria 3917
86 Ga0163163_10219469 3300014325 Bacteria 1950
87 Ga0157380_10053557 3300014326 Bacteria 3199
88 Ga0157379_10186829 3300014968 Bacteria 1873
89 Ga0157376_10027237 3300014969 Bacteria 4528
90 Ga0157376_10085361 3300014969 Bacteria 2720
91 Ga0163161_10154419 3300017792 Bacteria 1746
92 Ga0207642_10009669 3300025899 Bacteria 3365
93 Ga0207645_10046244 3300025907 Bacteria 2780
94 Ga0207684_10030436 3300025910 Bacteria 4595
95 Ga0207684_10081311 3300025910 Bacteria 2757
96 Ga0207707_10023970 3300025912 Bacteria 5335
97 Ga0207660_10040744 3300025917 Bacteria 3253
98 Ga0207662_10021608 3300025918 Bacteria 3682
99 Ga0207662_10049875 3300025918 Bacteria 2484
100 Ga0207657_10009582 3300025919 Bacteria 9722
101 Ga0207652_10059704 3300025921 Bacteria 3287
102 Ga0207652_10183996 3300025921 Bacteria 1878
103 Ga0207646_10012912 3300025922 Bacteria 8005
104 Ga0207646_10063225 3300025922 Unclassified 3305
105 Ga0207646_10241822 3300025922 Bacteria 1630
106 Ga0207681_10009460 3300025923 Bacteria 5957
107 Ga0207681_10068352 3300025923 Bacteria 2467
108 Ga0207687_10036944 3300025927 Bacteria 3330
109 Ga0207687_10096699 3300025927 Bacteria 2165
110 Ga0207706_10125368 3300025933 Bacteria 2259
111 Ga0207686_10024418 3300025934 Bacteria 3503
112 Ga0207686_10088665 3300025934 Bacteria 2037
113 Ga0207670_10080927 3300025936 Bacteria 2272
114 Ga0207670_10106103 3300025936 Bacteria 2015
115 Ga0207691_10034117 3300025940 Bacteria 4736
116 Ga0207711_10026197 3300025941 Bacteria 4891
117 Ga0207711_10058737 3300025941 Unclassified 3311
118 Ga0207689_10063093 3300025942 Bacteria 3048
119 Ga0207689_10089324 3300025942 Bacteria 2531
120 Ga0207667_10298363 3300025949 Bacteria 1646
121 Ga0207651_10044689 3300025960 Bacteria 2967
122 Ga0207651_10168839 3300025960 Bacteria 1723
123 Ga0207668_10048181 3300025972 Bacteria 2923
124 Ga0207658_10169417 3300025986 Bacteria 1798
125 Ga0207641_10002265 3300026088 Bacteria 17941
126 Ga0207641_10100364 3300026088 Bacteria 2549
127 Ga0207648_10034559 3300026089 Bacteria 4455
128 Ga0207648_10041070 3300026089 Bacteria 4063
129 Ga0207676_10053469 3300026095 Bacteria 3161
130 Ga0207674_10041493 3300026116 Bacteria 4759
131 Ga0207675_100017461 3300026118 Bacteria 6697
132 Ga0209971_1008865 3300027682 Bacteria 2387
133 Ga0207428_10017729 3300027907 Bacteria 6107
134 Ga0207428_10035320 3300027907 Bacteria 4086
135 Ga0268266_10048867 3300028379 Bacteria 3626
136 Ga0268265_10013035 3300028380 Bacteria 5645
137 Ga0436363_0680394 3300039450 Bacteria 1855
138 Ga0466959_0062453 3300045049 Bacteria 2707
139 Ga0451576_0138585 3300045051 Bacteria 2538
140 Ga0466967_0001611 3300045976 Bacteria 13313
141 Ga0495629_0146509 3300046459 Unclassified 1642
142 Ga0495628_0195277 3300046516 Bacteria 1527
143 Ga0495645_0029443 3300046543 Bacteria 3993
144 Ga0495658_0028307 3300046683 Bacteria 3024
145 Ga0495674_0217204 3300047319 Bacteria 1582
146 Ga0496100_0013207 3300048903 Bacteria 4757
147 Ga0496101_0000629 3300048904 Bacteria 21408
148 Ga0496102_0036888 3300048905 Bacteria 4407
149 Ga0496102_0069573 3300048905 Bacteria 3231
150 Ga0496104_0085333 3300048907 Bacteria 3014
151 Ga0496104_0111261 3300048907 Bacteria 2626
152 Ga0496105_0008387 3300048908 Bacteria 8032
153 Ga0496105_0106927 3300048908 Bacteria 2310
154 Ga0496106_0159223 3300048909 Bacteria 1785
155 Ga0496107_0056151 3300048910 Bacteria 2845
156 Ga0496109_0143428 3300048912 Bacteria 2234
157 Ga0496112_0022377 3300048915 Bacteria 6025
158 Ga0496112_0026371 3300048915 Bacteria 5590
159 Ga0496114_0012621 3300048917 Bacteria 6767
160 Ga0496115_0072965 3300048918 Bacteria 2785
161 Ga0501038_0084222 3300049574 Bacteria 2675
162 Ga0501039_0143818 3300049575 Bacteria 1874
163 Ga0501040_0013882 3300049576 Bacteria 5302
164 Ga0501041_0010873 3300049577 Bacteria 5370
165 Ga0501046_0033510 3300049580 Bacteria 4149
166 Ga0501048_0076978 3300049582 Bacteria 2354
167 Ga0501071_0057854 3300049587 Bacteria 2802
168 Ga0501073_0001785 3300049589 Bacteria 16000
169 Ga0501075_0007218 3300049591 Bacteria 7700
170 Ga0501075_0094926 3300049591 Bacteria 2263
171 Ga0501076_0030137 3300049592 Bacteria 4225
172 Ga0501076_0128006 3300049592 Bacteria 2058
173 Ga0501077_0092979 3300049593 Bacteria 1911
174 Ga0501079_0004683 3300049741 Bacteria 10133
175 Ga0501079_0112867 3300049741 Bacteria 2112
176 Ga0501079_0237652 3300049741 Bacteria 1423
177 Ga0501081_0008057 3300049743 Bacteria 6837
178 Ga0501081_0008924 3300049743 Bacteria 6515
179 Ga0501081_0082400 3300049743 Bacteria 2254
180 Ga0501083_0135319 3300049744 Unclassified 1615
181 Ga0501045_0012337 3300049824 Bacteria 6018
182 Ga0501045_0041956 3300049824 Unclassified 3330
183 nmdc:mga05p37_10205_c1 3300050507 Bacteria 11152
184 nmdc:mga05p37_124657_c1 3300050507 Bacteria 3164
185 nmdc:mga05p37_240638_c1 3300050507 Unclassified 1697
186 nmdc:mga05p37_287027_c1 3300050507 Bacteria 1960
187 nmdc:mga05p37_40097_c1 3300050507 Bacteria 5750
188 nmdc:mga08y16_41364_c1 3300050511 Bacteria 4828
189 nmdc:mga08y16_8346_c1 3300050511 Bacteria 10836
190 nmdc:mga0n895_23440_c1 3300050512 Bacteria 5801
191 nmdc:mga0n895_26429_c1 3300050512 Bacteria 5498
192 nmdc:mga0n895_39482_c1 3300050512 Bacteria 4580
193 nmdc:mga0rr50_12884_c1 3300050513 Bacteria 5422
194 nmdc:mga0rr50_26872_c1 3300050513 Bacteria 4024
195 nmdc:mga0rr50_72490_c1 3300050513 Bacteria 2630
196 nmdc:mga08x19_18244_c1 3300050514 Bacteria 4300
197 nmdc:mga08x19_8275_c1 3300050514 Bacteria 6186
198 Ga0501084_0002999 3300054114 Bacteria 13674
199 Ga0501082_0017849 3300060353 Bacteria 6111
200 Ga0530510_0000152 3300061734 Bacteria 41201
201 Ga0530510_0002288 3300061734 Bacteria 13135
202 Ga0530510_0070988 3300061734 Bacteria 2527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0237652 Ga0501079_0237652_248_1405 365
2 3300047319 Ga0495674_0217204 Ga0495674_0217204_355_1554 369
3 3300049744 Ga0501083_0135319 Ga0501083_0135319_206_1456 401
4 3300049743 Ga0501081_0082400 Ga0501081_0082400_942_2192 408
5 3300005338 Ga0068868_100100383 Ga0068868_1001003832 413
6 3300005548 Ga0070665_100008840 Ga0070665_1000088408 413
7 3300005615 Ga0070702_100111920 Ga0070702_1001119202 413
8 3300005718 Ga0068866_10045646 Ga0068866_100456462 413
9 3300009177 Ga0105248_10085976 Ga0105248_100859764 413
10 3300014968 Ga0157379_10186829 Ga0157379_101868292 413
11 3300025927 Ga0207687_10036944 Ga0207687_100369442 413
12 3300025942 Ga0207689_10089324 Ga0207689_100893242 413
13 3300045051 Ga0451576_0138585 Ga0451576_0138585_67_1374 418
14 3300050513 nmdc:mga0rr50_72490_c1 nmdc:mga0rr50_72490_c1_1272_2579 418
15 3300006914 Ga0075436_100027917 Ga0075436_1000279175 419
16 3300009098 Ga0105245_10237823 Ga0105245_102378231 419
17 3300025927 Ga0207687_10096699 Ga0207687_100966992 419
18 3300050514 nmdc:mga08x19_18244_c1 nmdc:mga08x19_18244_c1_2804_4162 419
19 3300009147 Ga0114129_10057089 Ga0114129_100570896 420
20 3300050507 nmdc:mga05p37_287027_c1 nmdc:mga05p37_287027_c1_37_1362 420
21 3300049591 Ga0501075_0007218 Ga0501075_0007218_1144_2499 422
22 3300049592 Ga0501076_0030137 Ga0501076_0030137_1504_2859 422
23 3300049741 Ga0501079_0004683 Ga0501079_0004683_2700_4055 422
24 3300049824 Ga0501045_0012337 Ga0501045_0012337_427_1782 422
25 3300054114 Ga0501084_0002999 Ga0501084_0002999_558_1913 422
26 3300061734 Ga0530510_0002288 Ga0530510_0002288_5053_6408 422
27 3300005530 Ga0070679_100156041 Ga0070679_1001560413 423
28 3300025921 Ga0207652_10059704 Ga0207652_100597043 423
29 3300045049 Ga0466959_0062453 Ga0466959_0062453_795_2096 423
30 3300005445 Ga0070708_100088975 Ga0070708_1000889751 424
31 3300005459 Ga0068867_100050373 Ga0068867_1000503731 424
32 3300006237 Ga0097621_100001349 Ga0097621_1000013494 424
33 3300006358 Ga0068871_100001564 Ga0068871_1000015649 424
34 3300009176 Ga0105242_10001673 Ga0105242_100016734 424
35 3300013297 Ga0157378_10063473 Ga0157378_100634731 424
36 3300025910 Ga0207684_10081311 Ga0207684_100813111 424
37 3300026089 Ga0207648_10034559 Ga0207648_100345592 424
38 3300009147 Ga0114129_10244598 Ga0114129_102445982 425
39 3300050507 nmdc:mga05p37_240638_c1 nmdc:mga05p37_240638_c1_189_1556 425
40 3300006871 Ga0075434_100109249 Ga0075434_1001092491 426
41 3300039450 Ga0436363_0680394 Ga0436363_0680394_338_1642 426
42 3300005336 Ga0070680_100089895 Ga0070680_1000898953 427
43 3300005530 Ga0070679_100002736 Ga0070679_1000027365 427
44 3300005530 Ga0070679_100010950 Ga0070679_1000109506 427
45 3300006237 Ga0097621_100067878 Ga0097621_1000678782 427
46 3300006358 Ga0068871_100008356 Ga0068871_1000083567 427
47 3300009094 Ga0111539_10037500 Ga0111539_100375003 427
48 3300013307 Ga0157372_10079113 Ga0157372_100791133 427
49 3300025912 Ga0207707_10023970 Ga0207707_100239701 427
50 3300025917 Ga0207660_10040744 Ga0207660_100407443 427
51 3300027907 Ga0207428_10017729 Ga0207428_100177296 427
52 3300046459 Ga0495629_0146509 Ga0495629_0146509_61_1434 427
53 3300048903 Ga0496100_0013207 Ga0496100_0013207_3196_4569 427
54 3300048904 Ga0496101_0000629 Ga0496101_0000629_4882_6255 427
55 3300048905 Ga0496102_0069573 Ga0496102_0069573_259_1632 427
56 3300048908 Ga0496105_0008387 Ga0496105_0008387_3230_4603 427
57 3300048909 Ga0496106_0159223 Ga0496106_0159223_58_1431 427
58 3300048910 Ga0496107_0056151 Ga0496107_0056151_560_1933 427
59 3300048915 Ga0496112_0026371 Ga0496112_0026371_413_1720 427
60 3300048917 Ga0496114_0012621 Ga0496114_0012621_1902_3275 427
61 3300050511 nmdc:mga08y16_8346_c1 nmdc:mga08y16_8346_c1_5957_7354 427
62 3300007076 Ga0075435_100020885 Ga0075435_1000208853 428
63 3300007076 Ga0075435_100030607 Ga0075435_1000306074 428
64 3300009176 Ga0105242_10087003 Ga0105242_100870031 428
65 3300014326 Ga0157380_10053557 Ga0157380_100535573 428
66 3300026089 Ga0207648_10041070 Ga0207648_100410702 428
67 3300050512 nmdc:mga0n895_26429_c1 nmdc:mga0n895_26429_c1_3102_4430 428
68 3300050513 nmdc:mga0rr50_12884_c1 nmdc:mga0rr50_12884_c1_684_2153 428
69 3300005548 Ga0070665_100065631 Ga0070665_1000656312 429
70 3300005617 Ga0068859_100221647 Ga0068859_1002216472 429
71 3300005718 Ga0068866_10017724 Ga0068866_100177242 429
72 3300005719 Ga0068861_100040730 Ga0068861_1000407302 429
73 3300005842 Ga0068858_100037030 Ga0068858_1000370302 429
74 3300006237 Ga0097621_100002549 Ga0097621_1000025496 429
75 3300006358 Ga0068871_100015134 Ga0068871_1000151344 429
76 3300006931 Ga0097620_100221637 Ga0097620_1002216372 429
77 3300009176 Ga0105242_10006458 Ga0105242_100064583 429
78 3300009176 Ga0105242_10035145 Ga0105242_100351453 429
79 3300009177 Ga0105248_10034206 Ga0105248_100342064 429
80 3300013296 Ga0157374_10014179 Ga0157374_100141795 429
81 3300013308 Ga0157375_10065148 Ga0157375_100651482 429
82 3300014325 Ga0163163_10219469 Ga0163163_102194691 429
83 3300014969 Ga0157376_10027237 Ga0157376_100272372 429
84 3300014969 Ga0157376_10085361 Ga0157376_100853612 429
85 3300017792 Ga0163161_10154419 Ga0163161_101544192 429
86 3300025899 Ga0207642_10009669 Ga0207642_100096692 429
87 3300025934 Ga0207686_10024418 Ga0207686_100244182 429
88 3300025934 Ga0207686_10088665 Ga0207686_100886652 429
89 3300025941 Ga0207711_10058737 Ga0207711_100587373 429
90 3300025960 Ga0207651_10168839 Ga0207651_101688392 429
91 3300025986 Ga0207658_10169417 Ga0207658_101694172 429
92 3300026118 Ga0207675_100017461 Ga0207675_1000174614 429
93 3300028379 Ga0268266_10048867 Ga0268266_100488672 429
94 3300046516 Ga0495628_0195277 Ga0495628_0195277_100_1503 429
95 3300046543 Ga0495645_0029443 Ga0495645_0029443_812_2266 429
96 3300048907 Ga0496104_0085333 Ga0496104_0085333_834_2207 429
97 3300048908 Ga0496105_0106927 Ga0496105_0106927_536_1909 429
98 3300048918 Ga0496115_0072965 Ga0496115_0072965_1353_2744 429
99 3300006914 Ga0075436_100029860 Ga0075436_1000298603 430
100 3300009147 Ga0114129_10006486 Ga0114129_100064869 430
101 3300025907 Ga0207645_10046244 Ga0207645_100462442 430
102 3300049589 Ga0501073_0001785 Ga0501073_0001785_14202_15524 430
103 3300050512 nmdc:mga0n895_39482_c1 nmdc:mga0n895_39482_c1_845_2203 430
104 3300005467 Ga0070706_100071398 Ga0070706_1000713982 431
105 3300005471 Ga0070698_100003805 Ga0070698_1000038056 431
106 3300005518 Ga0070699_100038951 Ga0070699_1000389512 431
107 3300005367 Ga0070667_100036253 Ga0070667_1000362532 432
108 3300005543 Ga0070672_100075459 Ga0070672_1000754591 432
109 3300005843 Ga0068860_100112215 Ga0068860_1001122151 432
110 3300009177 Ga0105248_10005629 Ga0105248_100056293 432
111 3300013306 Ga0163162_10027751 Ga0163162_100277513 432
112 3300025918 Ga0207662_10049875 Ga0207662_100498752 432
113 3300025940 Ga0207691_10034117 Ga0207691_100341174 432
114 3300048912 Ga0496109_0143428 Ga0496109_0143428_532_1977 432
115 3300049574 Ga0501038_0084222 Ga0501038_0084222_109_1452 432
116 3300049576 Ga0501040_0013882 Ga0501040_0013882_153_1496 432
117 3300049577 Ga0501041_0010873 Ga0501041_0010873_2325_3668 432
118 3300049582 Ga0501048_0076978 Ga0501048_0076978_58_1401 432
119 3300049587 Ga0501071_0057854 Ga0501071_0057854_1355_2698 432
120 3300049591 Ga0501075_0094926 Ga0501075_0094926_582_1925 432
121 3300049592 Ga0501076_0128006 Ga0501076_0128006_134_1477 432
122 3300049593 Ga0501077_0092979 Ga0501077_0092979_120_1463 432
123 3300049741 Ga0501079_0112867 Ga0501079_0112867_582_1925 432
124 3300049743 Ga0501081_0008924 Ga0501081_0008924_1963_3306 432
125 3300049824 Ga0501045_0041956 Ga0501045_0041956_53_1396 432
126 3300060353 Ga0501082_0017849 Ga0501082_0017849_4638_5981 432
127 3300061734 Ga0530510_0070988 Ga0530510_0070988_131_1474 432
128 3300025910 Ga0207684_10030436 Ga0207684_100304366 433
129 3300025922 Ga0207646_10012912 Ga0207646_1001291210 433
130 3300045976 Ga0466967_0001611 Ga0466967_0001611_11480_12973 433
131 3300005458 Ga0070681_10039579 Ga0070681_100395792 434
132 3300009177 Ga0105248_10113022 Ga0105248_101130222 434
133 3300026088 Ga0207641_10100364 Ga0207641_101003642 434
134 3300009147 Ga0114129_10002681 Ga0114129_1000268110 436
135 3300006871 Ga0075434_100004360 Ga0075434_1000043602 437
136 3300026116 Ga0207674_10041493 Ga0207674_100414934 437
137 3300027682 Ga0209971_1008865 Ga0209971_10088653 437
138 3300061734 Ga0530510_0000152 Ga0530510_0000152_21734_23119 437
139 3300005335 Ga0070666_10033453 Ga0070666_100334532 438
140 3300005343 Ga0070687_100010014 Ga0070687_1000100142 438
141 3300005353 Ga0070669_100009732 Ga0070669_1000097326 438
142 3300005518 Ga0070699_100153219 Ga0070699_1001532192 438
143 3300009094 Ga0111539_10057402 Ga0111539_100574022 438
144 3300025918 Ga0207662_10021608 Ga0207662_100216083 438
145 3300025923 Ga0207681_10009460 Ga0207681_100094606 438
146 3300025936 Ga0207670_10106103 Ga0207670_101061032 438
147 3300027907 Ga0207428_10035320 Ga0207428_100353202 438
148 3300048905 Ga0496102_0036888 Ga0496102_0036888_2448_3818 438
149 3300005334 Ga0068869_100106316 Ga0068869_1001063162 439
150 3300005467 Ga0070706_100218791 Ga0070706_1002187911 439
151 3300005468 Ga0070707_100079668 Ga0070707_1000796683 439
152 3300005546 Ga0070696_100055608 Ga0070696_1000556082 439
153 3300005618 Ga0068864_100017324 Ga0068864_1000173245 439
154 3300009147 Ga0114129_10002040 Ga0114129_1000204017 439
155 3300009177 Ga0105248_10014313 Ga0105248_100143135 439
156 3300014325 Ga0163163_10050035 Ga0163163_100500352 439
157 3300014325 Ga0163163_10055460 Ga0163163_100554602 439
158 3300025922 Ga0207646_10063225 Ga0207646_100632253 439
159 3300025941 Ga0207711_10026197 Ga0207711_100261971 439
160 3300025942 Ga0207689_10063093 Ga0207689_100630932 439
161 3300026095 Ga0207676_10053469 Ga0207676_100534692 439
162 3300048915 Ga0496112_0022377 Ga0496112_0022377_1015_2430 439
163 3300049575 Ga0501039_0143818 Ga0501039_0143818_396_1814 439
164 3300049580 Ga0501046_0033510 Ga0501046_0033510_747_2165 439
165 3300049743 Ga0501081_0008057 Ga0501081_0008057_4670_6088 439
166 3300050507 nmdc:mga05p37_10205_c1 nmdc:mga05p37_10205_c1_3561_4889 439
167 3300005518 Ga0070699_100005625 Ga0070699_1000056259 440
168 3300007076 Ga0075435_100175014 Ga0075435_1001750141 440
169 3300009094 Ga0111539_10019106 Ga0111539_100191064 440
170 3300025922 Ga0207646_10241822 Ga0207646_102418221 440
171 3300046683 Ga0495658_0028307 Ga0495658_0028307_319_1761 440
172 3300005340 Ga0070689_100135829 Ga0070689_1001358291 441
173 3300005365 Ga0070688_100048085 Ga0070688_1000480851 441
174 3300005435 Ga0070714_100028293 Ga0070714_1000282934 441
175 3300005466 Ga0070685_10064530 Ga0070685_100645302 441
176 3300005841 Ga0068863_100011899 Ga0068863_1000118995 441
177 3300009177 Ga0105248_10113168 Ga0105248_101131681 441
178 3300025936 Ga0207670_10080927 Ga0207670_100809271 441
179 3300025960 Ga0207651_10044689 Ga0207651_100446891 441
180 3300026088 Ga0207641_10002265 Ga0207641_100022659 441
181 3300048907 Ga0496104_0111261 Ga0496104_0111261_334_1749 441
182 3300050507 nmdc:mga05p37_124657_c1 nmdc:mga05p37_124657_c1_99_1574 441
183 3300050512 nmdc:mga0n895_23440_c1 nmdc:mga0n895_23440_c1_3665_5158 441
184 3300050514 nmdc:mga08x19_8275_c1 nmdc:mga08x19_8275_c1_211_1587 441
185 3300009093 Ga0105240_10093038 Ga0105240_100930384 442
186 3300005327 Ga0070658_10059780 Ga0070658_100597802 444
187 3300005336 Ga0070680_100035835 Ga0070680_1000358352 444
188 3300005339 Ga0070660_100005154 Ga0070660_1000051545 444
189 3300005530 Ga0070679_100098842 Ga0070679_1000988422 444
190 3300005563 Ga0068855_100037272 Ga0068855_1000372723 444
191 3300005844 Ga0068862_100061211 Ga0068862_1000612112 444
192 3300009147 Ga0114129_10059002 Ga0114129_100590022 444
193 3300025919 Ga0207657_10009582 Ga0207657_100095829 444
194 3300025921 Ga0207652_10183996 Ga0207652_101839962 444
195 3300025923 Ga0207681_10068352 Ga0207681_100683522 444
196 3300025933 Ga0207706_10125368 Ga0207706_101253682 444
197 3300025949 Ga0207667_10298363 Ga0207667_102983632 444
198 3300025972 Ga0207668_10048181 Ga0207668_100481812 444
199 3300028380 Ga0268265_10013035 Ga0268265_100130352 444
200 3300050507 nmdc:mga05p37_40097_c1 nmdc:mga05p37_40097_c1_3413_5017 444
201 3300050511 nmdc:mga08y16_41364_c1 nmdc:mga08y16_41364_c1_353_1723 444
202 3300050513 nmdc:mga0rr50_26872_c1 nmdc:mga0rr50_26872_c1_920_2314 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

254

419

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b4c-assembly5.cif.gz_E structure of viperin from trichoderma virens 0.8321 163 334
7o26-assembly1.cif.gz_A complex-b bound [fefe]-hydrogenase maturase hyde fromt. maritima (5'da + methionine) 0.8129 163 332
6q2q-assembly1.cif.gz_A crystal structure of mouse viperin bound to uridine triphosphate and s-adenosylhomocysteine 0.8035 163 334
6b4c-assembly7.cif.gz_G structure of viperin from trichoderma virens 0.8003 163 334
6b4c-assembly8.cif.gz_H structure of viperin from trichoderma virens 0.7951 163 334
ID Description Score Start End Superfamily
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.848 162 364 3.80.30.20
af_Q58555_290_551_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8375 165 334 3.80.30.20
af_Q58275_166_383_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8065 165 374 3.80.30.20
2qxyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8 1 118 3.40.50.2300
af_P0ADW6_41_234_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.796 197 333 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A2V6X017-F1-model_v4 Radical SAM protein 0.9808 187 337 GO:0003824
GO:0005829
GO:0051536
AF-A0A3M1ZUR5-F1-model_v4 Radical SAM protein 0.97 150 444 GO:0003824
GO:0005829
GO:0051536
AF-A0A259ER47-F1-model_v4 Radical SAM protein 0.9686 12 394 GO:0003824
GO:0005829
GO:0051536
AF-A0A382QAC0-F1-model_v4 Radical SAM core domain-containing protein 0.9668 2 305 GO:0003824
GO:0005829
GO:0051536
AF-A0A2V6X017-F1-model_v4 Radical SAM protein 0.962 187 337 GO:0003824
GO:0005829
GO:0051536

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pLDDT pTM Quality
93.05 0.91 High
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Predicted Structure (AlphaFold2)

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