F310131

General Info

Members Datasets Scaffolds Average Seq Length
202 115 404 376

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0955233|Ga0436364_0955233_2487_3602
Length 371
Sequence MKLTPFLLDQWLELKNTADPPIEYDLGSSTGPVWTLHELLALGGHDFESFLDTRLFYTSPAGSEELRNAIATLEGVDVSAVQVLTGAAEALLILFFLAAEAGANIVLPSPGFPTNAALPQGLRLETRYYKLRARGRFRIDLDEIRALVDDHTRFVFVNSPHNPTGRVLSDKEAEEIHDFCAARRVQIVFDQVYHPIYHGEPSRTAARLPHATVLGDFSKALCLSGLRVGWIIEHDPARRAEYLNARSYFTVSNSILNERLATFALAHRDAIYERARRTTQKNLALLDPVLSGNDFIGWVRPQGGMTGFPWLVDGTNAREFCRDLAKRGVLLAPGDCFDMPSHFRIGFGTSGDRFPLALERFSEFLASYVAA

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
92 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
93 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
112 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
113 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.52
Metatranscriptomes 2.48
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 11.39
Rhizosphere 85.64
Stem 0
Stem Tuber 0
Unclassified 21.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0955233 3300037853 Bacteria 6062
2 Ga0070661_100039809 3300005344 Unclassified 3425
3 Ga0070709_10005038 3300005434 Bacteria 7143
4 Ga0070709_10053821 3300005434 Unclassified 2535
5 Ga0070709_10168151 3300005434 Bacteria 1530
6 Ga0070714_100000229 3300005435 Bacteria 44166
7 Ga0070713_100001833 3300005436 Bacteria 13718
8 Ga0070713_100013450 3300005436 Bacteria 6044
9 Ga0070713_100032422 3300005436 Unclassified 4173
10 Ga0070713_100045118 3300005436 Bacteria 3610
11 Ga0070713_100077995 3300005436 Plasmid 2819
12 Ga0070713_100095608 3300005436 Bacteria 2563
13 Ga0070713_100096764 3300005436 Unclassified 2549
14 Ga0070710_10014836 3300005437 Bacteria 3928
15 Ga0070710_10018582 3300005437 Bacteria 3578
16 Ga0070710_10023467 3300005437 Unclassified 3244
17 Ga0070710_10033844 3300005437 Unclassified 2777
18 Ga0070710_10159280 3300005437 Unclassified 1398
19 Ga0070711_100001611 3300005439 Bacteria 12451
20 Ga0070711_100032465 3300005439 Unclassified 3471
21 Ga0070711_100033662 3300005439 Unclassified 3413
22 Ga0070711_100068305 3300005439 Bacteria 2497
23 Ga0070711_100290071 3300005439 Unclassified 1297
24 Ga0070681_10168486 3300005458 Unclassified 2112
25 Ga0070681_10317882 3300005458 Bacteria 1466
26 Ga0070699_100023920 3300005518 Bacteria 5266
27 Ga0070679_100007025 3300005530 Bacteria 10500
28 Ga0070679_100020485 3300005530 Bacteria 6448
29 Ga0070697_100075411 3300005536 Unclassified 2772
30 Ga0068853_100008155 3300005539 Bacteria 8407
31 Ga0068853_100040338 3300005539 Bacteria 3983
32 Ga0068855_100126863 3300005563 Bacteria 2917
33 Ga0070664_100341300 3300005564 Archaea 1361
34 Ga0068857_100028279 3300005577 Bacteria 4946
35 Ga0068856_100035796 3300005614 Unclassified 4866
36 Ga0068858_100228953 3300005842 Bacteria 1762
37 Ga0070717_10042882 3300006028 Bacteria 3691
38 Ga0070715_10006662 3300006163 Bacteria 3942
39 Ga0070715_10035288 3300006163 Unclassified 2056
40 Ga0070716_100000050 3300006173 Bacteria 45407
41 Ga0070716_100010251 3300006173 Bacteria 4695
42 Ga0070712_100000512 3300006175 Bacteria 22246
43 Ga0070712_100002600 3300006175 Bacteria 11154
44 Ga0070712_100002911 3300006175 Bacteria 10608
45 Ga0070712_100002934 3300006175 Bacteria 10567
46 Ga0070712_100003411 3300006175 Bacteria 9775
47 Ga0070712_100012606 3300006175 Bacteria 5378
48 Ga0070712_100086268 3300006175 Bacteria 2288
49 Ga0075430_100149723 3300006846 Bacteria 1944
50 Ga0075431_100031985 3300006847 Bacteria 5421
51 Ga0075433_10019922 3300006852 Bacteria 5601
52 Ga0075434_100002641 3300006871 Bacteria 15808
53 Ga0075435_100284052 3300007076 Bacteria 1413
54 Ga0099794_10039354 3300007265 Bacteria 2244
55 Ga0105245_10002497 3300009098 Bacteria 16589
56 Ga0105245_10053483 3300009098 Unclassified 3624
57 Ga0105247_10150205 3300009101 Bacteria 1534
58 Ga0114129_10012283 3300009147 Bacteria 12184
59 Ga0105241_10030149 3300009174 Unclassified 4052
60 Ga0105241_10070356 3300009174 Bacteria 2714
61 Ga0105238_10160902 3300009551 Archaea 2221
62 Ga0157370_10067377 3300013104 Bacteria 3384
63 Ga0157370_10190853 3300013104 Archaea 1902
64 Ga0157369_10097670 3300013105 Bacteria 3133
65 Ga0157369_10465203 3300013105 Archaea 1309
66 Ga0157374_10136125 3300013296 Bacteria 2381
67 Ga0157374_10185856 3300013296 Unclassified 2032
68 Ga0163163_10252970 3300014325 Archaea 1812
69 Ga0163163_10274588 3300014325 Bacteria 1737
70 Ga0182008_10017201 3300014497 Unclassified 3752
71 Ga0157379_10030490 3300014968 Unclassified 4801
72 Ga0157376_10004031 3300014969 Bacteria 10159
73 Ga0206356_10957797 3300020070 Bacteria 1243
74 Ga0207656_10042670 3300025321 Archaea 1931
75 Ga0207692_10008270 3300025898 Bacteria 4303
76 Ga0207692_10011525 3300025898 Bacteria 3767
77 Ga0207692_10030312 3300025898 Unclassified 2579
78 Ga0207692_10068730 3300025898 Unclassified 1859
79 Ga0207692_10072773 3300025898 Bacteria 1816
80 Ga0207699_10000600 3300025906 Bacteria 17723
81 Ga0207699_10025524 3300025906 Bacteria 3245
82 Ga0207707_10015022 3300025912 Bacteria 6742
83 Ga0207707_10017048 3300025912 Bacteria 6328
84 Ga0207707_10270605 3300025912 Bacteria 1472
85 Ga0207693_10000203 3300025915 Bacteria 54373
86 Ga0207693_10002011 3300025915 Bacteria 17845
87 Ga0207693_10003469 3300025915 Bacteria 13455
88 Ga0207693_10004644 3300025915 Bacteria 11586
89 Ga0207693_10024851 3300025915 Bacteria 4751
90 Ga0207693_10028877 3300025915 Bacteria 4383
91 Ga0207693_10052032 3300025915 Bacteria 3212
92 Ga0207693_10125168 3300025915 Unclassified 2020
93 Ga0207663_10001746 3300025916 Bacteria 10225
94 Ga0207663_10002344 3300025916 Bacteria 9093
95 Ga0207663_10023486 3300025916 Unclassified 3539
96 Ga0207663_10139375 3300025916 Bacteria 1687
97 Ga0207663_10277271 3300025916 Unclassified 1244
98 Ga0207660_10001742 3300025917 Bacteria 14580
99 Ga0207657_10003412 3300025919 Bacteria 16957
100 Ga0207652_10002316 3300025921 Bacteria 16138
101 Ga0207652_10022366 3300025921 Bacteria 5230
102 Ga0207646_10000509 3300025922 Bacteria 52013
103 Ga0207687_10155057 3300025927 Bacteria 1751
104 Ga0207700_10008471 3300025928 Bacteria 6375
105 Ga0207700_10022551 3300025928 Bacteria 4323
106 Ga0207700_10044794 3300025928 Bacteria 3260
107 Ga0207700_10151416 3300025928 Bacteria 1917
108 Ga0207700_10179783 3300025928 Bacteria 1770
109 Ga0207700_10233629 3300025928 Bacteria 1564
110 Ga0207700_10238961 3300025928 Unclassified 1547
111 Ga0207664_10000428 3300025929 Bacteria 30017
112 Ga0207665_10000152 3300025939 Bacteria 46840
113 Ga0207665_10042513 3300025939 Bacteria 3037
114 Ga0207667_10493119 3300025949 Unclassified 1243
115 Ga0207677_10170560 3300026023 Unclassified 1701
116 Ga0207639_10008170 3300026041 Bacteria 7159
117 Ga0207674_10008687 3300026116 Bacteria 11696
118 Ga0207683_10041887 3300026121 Bacteria 3999
119 Ga0265338_10028413 3300028800 Bacteria 5578
120 Ga0265338_10109713 3300028800 Bacteria 2226
121 Ga0265760_10046642 3300031090 Bacteria 1300
122 Ga0307408_100227277 3300031548 Bacteria 1526
123 Ga0307405_10244204 3300031731 Bacteria 1332
124 Ga0307413_10226307 3300031824 Bacteria 1370
125 Ga0307410_10122429 3300031852 Bacteria 1899
126 Ga0307406_10055899 3300031901 Bacteria 2525
127 Ga0307416_100474767 3300032002 Bacteria 1309
128 Ga0307411_10035788 3300032005 Bacteria 3105
129 Ga0373953_0071053 3300035117 Bacteria 1436
130 Ga0373956_0029411 3300035119 Bacteria 2396
131 Ga0373946_0016802 3300035171 Bacteria 2792
132 Ga0373955_0106518 3300035172 Bacteria 1616
133 Ga0373924_0000322 3300035410 Bacteria 14777
134 Ga0373927_0154402 3300035695 Bacteria 1503
135 Ga0373937_0064740 3300036401 Unclassified 3363
136 Ga0373937_0144459 3300036401 Unclassified 2227
137 Ga0373925_0016817 3300037068 Bacteria 5296
138 Ga0373925_0174066 3300037068 Bacteria 1700
139 Ga0395898_0173610 3300037466 Unclassified 2060
140 Ga0395905_0020005 3300037471 Bacteria 6343
141 Ga0395905_0023355 3300037471 Bacteria 5845
142 Ga0395905_0096846 3300037471 Bacteria 2770
143 Ga0436365_1365025 3300039437 Unclassified 1695
144 Ga0436365_1830259 3300039437 Bacteria 4193
145 Ga0436363_0063092 3300039450 Bacteria 3140
146 Ga0466963_0002504 3300044694 Bacteria 10282
147 Ga0466957_0000289 3300044842 Bacteria 24617
148 Ga0466957_0046862 3300044842 Bacteria 2626
149 Ga0466967_0002162 3300045976 Bacteria 12065
150 Ga0466967_0209284 3300045976 Bacteria 1849
151 Ga0495603_0145628 3300046455 Bacteria 1377
152 Ga0495580_0000774 3300046472 Bacteria 27522
153 Ga0495580_0019309 3300046472 Bacteria 5065
154 Ga0495582_0001668 3300046473 Bacteria 12525
155 Ga0495582_0096439 3300046473 Bacteria 1653
156 Ga0495639_0031165 3300046475 Unclassified 2373
157 Ga0495630_0030181 3300046517 Bacteria 4032
158 Ga0495630_0087187 3300046517 Bacteria 2357
159 Ga0495665_0091066 3300046531 Bacteria 1602
160 Ga0495645_0051648 3300046543 Bacteria 2991
161 Ga0495647_0046702 3300046681 Bacteria 1669
162 Ga0495669_0004863 3300046684 Bacteria 5574
163 Ga0495624_0124574 3300046690 Bacteria 1582
164 Ga0495581_0140910 3300047315 Bacteria 1406
165 Ga0495674_0074756 3300047319 Bacteria 2917
166 Ga0495674_0107483 3300047319 Unclassified 2368
167 Ga0495614_0068421 3300048089 Bacteria 1529
168 Ga0496102_0003593 3300048905 Bacteria 13135
169 Ga0496102_0018084 3300048905 Bacteria 6187
170 Ga0496102_0232994 3300048905 Bacteria 1736
171 Ga0496103_0008232 3300048906 Bacteria 6191
172 Ga0496104_0003899 3300048907 Bacteria 12916
173 Ga0496104_0211817 3300048907 Bacteria 1849
174 Ga0496104_0250914 3300048907 Unclassified 1682
175 Ga0496104_0349556 3300048907 Unclassified 1391
176 Ga0496105_0029176 3300048908 Bacteria 4515
177 Ga0496108_0009132 3300048911 Bacteria 8025
178 Ga0496109_0120415 3300048912 Bacteria 2445
179 Ga0496109_0312896 3300048912 Unclassified 1481
180 Ga0496112_0004572 3300048915 Bacteria 11758
181 Ga0496112_0032625 3300048915 Bacteria 5057
182 Ga0496112_0054212 3300048915 Bacteria 3939
183 Ga0496112_0491633 3300048915 Bacteria 1163
184 Ga0496113_0001639 3300048916 Bacteria 12612
185 Ga0496113_0010462 3300048916 Bacteria 6134
186 Ga0496115_0023970 3300048918 Bacteria 4739
187 Ga0496115_0069451 3300048918 Unclassified 2854
188 Ga0496115_0144544 3300048918 Bacteria 1963
189 Ga0496115_0161899 3300048918 Bacteria 1849
190 Ga0496115_0227678 3300048918 Bacteria 1538
191 Ga0496126_0000018 3300048929 Bacteria 581170
192 Ga0496126_0005720 3300048929 Bacteria 14086
193 Ga0501067_0101737 3300049583 Unclassified 1597
194 nmdc:mga05p37_208402_c1 3300050507 Unclassified 2364
195 nmdc:mga0n895_14405_c1 3300050512 Bacteria 7180
196 nmdc:mga0a205_20150_c1 3300050515 Bacteria 6291
197 Ga0495601_0013808 3300053077 Unclassified 4862
198 Ga0495601_0096851 3300053077 Unclassified 1903
199 Ga0495619_0107159 3300053085 Bacteria 1906
200 Ga0587084_009905 3300059477 Unclassified 1240
201 Ga0587062_003677 3300059639 Unclassified 1573
202 Ga0587076_011317 3300059645 Bacteria 1309
203 Ga0436364_0955233
204 Ga0070661_100039809
205 Ga0070709_10005038
206 Ga0070709_10053821
207 Ga0070709_10168151
208 Ga0070714_100000229
209 Ga0070713_100001833
210 Ga0070713_100013450
211 Ga0070713_100032422
212 Ga0070713_100045118
213 Ga0070713_100077995
214 Ga0070713_100095608
215 Ga0070713_100096764
216 Ga0070710_10014836
217 Ga0070710_10018582
218 Ga0070710_10023467
219 Ga0070710_10033844
220 Ga0070710_10159280
221 Ga0070711_100001611
222 Ga0070711_100032465
223 Ga0070711_100033662
224 Ga0070711_100068305
225 Ga0070711_100290071
226 Ga0070681_10168486
227 Ga0070681_10317882
228 Ga0070699_100023920
229 Ga0070679_100007025
230 Ga0070679_100020485
231 Ga0070697_100075411
232 Ga0068853_100008155
233 Ga0068853_100040338
234 Ga0068855_100126863
235 Ga0070664_100341300
236 Ga0068857_100028279
237 Ga0068856_100035796
238 Ga0068858_100228953
239 Ga0070717_10042882
240 Ga0070715_10006662
241 Ga0070715_10035288
242 Ga0070716_100000050
243 Ga0070716_100010251
244 Ga0070712_100000512
245 Ga0070712_100002600
246 Ga0070712_100002911
247 Ga0070712_100002934
248 Ga0070712_100003411
249 Ga0070712_100012606
250 Ga0070712_100086268
251 Ga0075430_100149723
252 Ga0075431_100031985
253 Ga0075433_10019922
254 Ga0075434_100002641
255 Ga0075435_100284052
256 Ga0099794_10039354
257 Ga0105245_10002497
258 Ga0105245_10053483
259 Ga0105247_10150205
260 Ga0114129_10012283
261 Ga0105241_10030149
262 Ga0105241_10070356
263 Ga0105238_10160902
264 Ga0157370_10067377
265 Ga0157370_10190853
266 Ga0157369_10097670
267 Ga0157369_10465203
268 Ga0157374_10136125
269 Ga0157374_10185856
270 Ga0163163_10252970
271 Ga0163163_10274588
272 Ga0182008_10017201
273 Ga0157379_10030490
274 Ga0157376_10004031
275 Ga0206356_10957797
276 Ga0207656_10042670
277 Ga0207692_10008270
278 Ga0207692_10011525
279 Ga0207692_10030312
280 Ga0207692_10068730
281 Ga0207692_10072773
282 Ga0207699_10000600
283 Ga0207699_10025524
284 Ga0207707_10015022
285 Ga0207707_10017048
286 Ga0207707_10270605
287 Ga0207693_10000203
288 Ga0207693_10002011
289 Ga0207693_10003469
290 Ga0207693_10004644
291 Ga0207693_10024851
292 Ga0207693_10028877
293 Ga0207693_10052032
294 Ga0207693_10125168
295 Ga0207663_10001746
296 Ga0207663_10002344
297 Ga0207663_10023486
298 Ga0207663_10139375
299 Ga0207663_10277271
300 Ga0207660_10001742
301 Ga0207657_10003412
302 Ga0207652_10002316
303 Ga0207652_10022366
304 Ga0207646_10000509
305 Ga0207687_10155057
306 Ga0207700_10008471
307 Ga0207700_10022551
308 Ga0207700_10044794
309 Ga0207700_10151416
310 Ga0207700_10179783
311 Ga0207700_10233629
312 Ga0207700_10238961
313 Ga0207664_10000428
314 Ga0207665_10000152
315 Ga0207665_10042513
316 Ga0207667_10493119
317 Ga0207677_10170560
318 Ga0207639_10008170
319 Ga0207674_10008687
320 Ga0207683_10041887
321 Ga0265338_10028413
322 Ga0265338_10109713
323 Ga0265760_10046642
324 Ga0307408_100227277
325 Ga0307405_10244204
326 Ga0307413_10226307
327 Ga0307410_10122429
328 Ga0307406_10055899
329 Ga0307416_100474767
330 Ga0307411_10035788
331 Ga0373953_0071053
332 Ga0373956_0029411
333 Ga0373946_0016802
334 Ga0373955_0106518
335 Ga0373924_0000322
336 Ga0373927_0154402
337 Ga0373937_0064740
338 Ga0373937_0144459
339 Ga0373925_0016817
340 Ga0373925_0174066
341 Ga0395898_0173610
342 Ga0395905_0020005
343 Ga0395905_0023355
344 Ga0395905_0096846
345 Ga0436365_1365025
346 Ga0436365_1830259
347 Ga0436363_0063092
348 Ga0466963_0002504
349 Ga0466957_0000289
350 Ga0466957_0046862
351 Ga0466967_0002162
352 Ga0466967_0209284
353 Ga0495603_0145628
354 Ga0495580_0000774
355 Ga0495580_0019309
356 Ga0495582_0001668
357 Ga0495582_0096439
358 Ga0495639_0031165
359 Ga0495630_0030181
360 Ga0495630_0087187
361 Ga0495665_0091066
362 Ga0495645_0051648
363 Ga0495647_0046702
364 Ga0495669_0004863
365 Ga0495624_0124574
366 Ga0495581_0140910
367 Ga0495674_0074756
368 Ga0495674_0107483
369 Ga0495614_0068421
370 Ga0496102_0003593
371 Ga0496102_0018084
372 Ga0496102_0232994
373 Ga0496103_0008232
374 Ga0496104_0003899
375 Ga0496104_0211817
376 Ga0496104_0250914
377 Ga0496104_0349556
378 Ga0496105_0029176
379 Ga0496108_0009132
380 Ga0496109_0120415
381 Ga0496109_0312896
382 Ga0496112_0004572
383 Ga0496112_0032625
384 Ga0496112_0054212
385 Ga0496112_0491633
386 Ga0496113_0001639
387 Ga0496113_0010462
388 Ga0496115_0023970
389 Ga0496115_0069451
390 Ga0496115_0144544
391 Ga0496115_0161899
392 Ga0496115_0227678
393 Ga0496126_0000018
394 Ga0496126_0005720
395 Ga0501067_0101737
396 nmdc:mga05p37_208402_c1
397 nmdc:mga0n895_14405_c1
398 nmdc:mga0a205_20150_c1
399 Ga0495601_0013808
400 Ga0495601_0096851
401 Ga0495619_0107159
402 Ga0587084_009905
403 Ga0587062_003677
404 Ga0587076_011317

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

45

361

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fft-assembly2.cif.gz_D structure of gntc, a plp-dependent enzyme catalyzing l-enduracididine biosynthesis from (s)-4-hydroxy-l-arginine 0.8959 19 365
3op7-assembly1.cif.gz_A crystal structure of a plp-dependent aminotransferase (zp_03625122.1) from streptococcus suis 89-1591 at 1.70 a resolution 0.895 3 366
8fft-assembly2.cif.gz_C structure of gntc, a plp-dependent enzyme catalyzing l-enduracididine biosynthesis from (s)-4-hydroxy-l-arginine 0.8947 22 365
8fft-assembly1.cif.gz_B structure of gntc, a plp-dependent enzyme catalyzing l-enduracididine biosynthesis from (s)-4-hydroxy-l-arginine 0.8921 19 365
8fft-assembly2.cif.gz_C structure of gntc, a plp-dependent enzyme catalyzing l-enduracididine biosynthesis from (s)-4-hydroxy-l-arginine 0.885 22 365
ID Description Score Start End Superfamily
af_A0A1D8PRL8_58_286_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.916 52 266 3.40.640.10
1c7nA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8909 54 265 3.40.640.10
1o4sB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8901 54 263 3.40.640.10
3ffhA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8899 52 263 3.40.640.10
3p6kB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8869 54 263 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A3N5FWP1-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9228 140 374 GO:0008483
GO:0009058
GO:0030170
AF-A0A0Q9YU75-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (Capreomycidine synthase (EC 4.3.2.-)) 0.9194 3 364 GO:0008483
GO:0009058
GO:0016829
GO:0030170
AF-A0A3N5FWP1-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9154 140 374 GO:0008483
GO:0009058
GO:0030170
AF-A0A524G178-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9131 69 366 GO:0008483
GO:0009058
GO:0030170
AF-A0A1F5KDR8-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9125 1 366 GO:0008483
GO:0009058
GO:0030170

Map