F309152
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 201 | 157 | 133 | 369 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2616644814|2616693962 |
| Length | 437 |
| Sequence | KDSDYKERFDSLKPIRWLLRRSASEVMPRGAVRPYDLGVSARTTEDRRGRDKDAGYARGCALEPVSEESTAVTHPFLDLAPLSAAHFAAIEDRVARLLSTEQDVVIMQGEALLPLEGALRATAGPGTTALNVITGPYGQTFGDWLRDCGATVIDLAVPFHTAVTAAQVRDAFAEHPAIDFVSLVHAEAATGNTNPVAEIGEVVRAHGALFYLDAVASIGAEPVLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSERAWARMAANPGAPRRSYLSLLDWKERWVDGGRKALLHAPAQLEMLALEACVERIEAEGLDAVMRRHTLAAAATRAGAVALGGGLEPYVYEAGDAAPVATTLRAPSGVDAGALVAKALAADPVLPLVAGGGALAKEMIRVNHYGPDATPGVVHSCLAALGAAMAESGLTVDLEAARRATTKAWA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2554235005 | Streptomyces violaceusniger SPC6 | Isolate | Rhizosphere |
| 2 | 2582581312 | Streptomyces atratus OK008 | Isolate | Rhizosphere |
| 3 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 4 | 2616644814 | Streptomyces mirabilis OK461 | Isolate | Rhizosphere |
| 5 | 2616644941 | Streptomyces atratus OK807 | Isolate | Rhizosphere |
| 6 | 2643221548 | Streptomyces sp. Root55 | Isolate | Unclassified |
| 7 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 8 | 2643221587 | Streptomyces sp. Root66D1 | Isolate | Unclassified |
| 9 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 10 | 2643221670 | Streptomyces sp. Root431 | Isolate | Unclassified |
| 11 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 12 | 2643221677 | Streptomyces sp. Root1304 | Isolate | Unclassified |
| 13 | 2643221678 | Streptomyces sp. Root1310 | Isolate | Unclassified |
| 14 | 2643221682 | Streptomyces sp. Root1319 | Isolate | Unclassified |
| 15 | 2643221714 | Streptomyces sp. Root264 | Isolate | Unclassified |
| 16 | 2784132148 | Streptomyces sp. E5N91 SAI-083 | Isolate | Unclassified |
| 17 | 2784746763 | Streptomyces ossamyceticus SAI-001 | Isolate | Unclassified |
| 18 | 2784746768 | Streptomyces griseorubiginosus SAI-142 | Isolate | Unclassified |
| 19 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 20 | 2802429296 | Streptomyces sampsonii KJ40 | Isolate | Rhizosphere |
| 21 | 2808606359 | Streptomyces sp. RJA2910 | Isolate | Unclassified |
| 22 | 2808606375 | Streptomyces sp. SLBN-31 | Isolate | Unclassified |
| 23 | 2808606448 | Streptomyces sp. 193411 | Isolate | Unclassified |
| 24 | 2811994879 | Streptomyces sp. 4-17 | Isolate | Unclassified |
| 25 | 2811994917 | Streptomyces sp. SLBN-134 | Isolate | Unclassified |
| 26 | 2818991463 | Streptomyces argenteolus 3259 | Isolate | Rhizosphere |
| 27 | 2852635781 | Streptomyces sp. AK010 | Isolate | Rhizosphere |
| 28 | 2862178590 | Streptomyces sp. SDr-06 | Isolate | Rhizosphere |
| 29 | 2862281513 | Streptomyces sp. Act143 | Isolate | Rhizosphere |
| 30 | 2862290372 | Streptomyces triticagri NEAU-YY421 | Isolate | Rhizosphere |
| 31 | 2862382967 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 32 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 33 | 2862574272 | Streptomyces sp. AcE210 | Isolate | Nodule |
| 34 | 2863404153 | Streptomyces scabiei SAI-025 (Annotation) (version 2) | Isolate | Unclassified |
| 35 | 2867428634 | Streptomyces sp. RP5T | Isolate | Unclassified |
| 36 | 2873151551 | Streptomyces silaceus ACCC40021 | Isolate | Rhizosphere |
| 37 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 38 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 39 | 2912715099 | Streptomyces sp. Z423-1 | Isolate | Rhizosphere |
| 40 | 2912723979 | Streptomyces sp. NEAU-sy36 | Isolate | Rhizosphere |
| 41 | 2912757875 | Streptomyces sp. S4.7 | Isolate | Rhizosphere |
| 42 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 43 | 2919468124 | Streptomyces sp. 3330 | Isolate | Rhizosphere |
| 44 | 2935390628 | Streptomyces sp. PvR034 | Isolate | Rhizosphere |
| 45 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 46 | 2946064051 | Streptomyces luteogriseus W4I19-1 | Isolate | Rhizosphere |
| 47 | 2946072368 | Streptomyces achromogenes W4I19-2 | Isolate | Rhizosphere |
| 48 | 2954002825 | Streptomyces turgidiscabies W2I16 | Isolate | Rhizosphere |
| 49 | 2954380949 | Streptomyces ciscaucasicus W1I15 | Isolate | Rhizosphere |
| 50 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 51 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 52 | 2954691527 | Streptomyces sp. SAI-127 | Isolate | Rhizosphere |
| 53 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 54 | 2954711539 | Streptomyces sp. SAI-090 | Isolate | Rhizosphere |
| 55 | 2954721474 | Streptomyces sp. SAI-117 | Isolate | Rhizosphere |
| 56 | 2954731030 | Streptomyces sp. SAI-133 | Isolate | Rhizosphere |
| 57 | 2954740390 | Streptomyces sp. SAI-041 | Isolate | Rhizosphere |
| 58 | 2954749733 | Streptomyces sp. SAI-135 | Isolate | Rhizosphere |
| 59 | 2954759201 | Streptomyces sp. SAI-208 | Isolate | Rhizosphere |
| 60 | 2966598605 | Kitasatospora papulosa SLBN-177 | Isolate | Rhizosphere |
| 61 | 2990059506 | Streptomyces sp. CAP261 | Isolate | Unclassified |
| 62 | 3006425503 | Streptomyces zingiberis PLAI1-29 | Isolate | Unclassified |
| 63 | 3006493962 | Streptomyces grisecoloratus TRM S81-3 | Isolate | Rhizosphere |
| 64 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 65 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 66 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 67 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300015688 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 | Metagenome | Rhizosphere |
| 69 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 70 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 71 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 72 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 73 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 74 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 75 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 76 | 3300042012 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 | Metagenome | Rhizosphere |
| 77 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 78 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 79 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 80 | 3300042132 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 | Metagenome | Rhizosphere |
| 81 | 3300042138 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 | Metagenome | Rhizosphere |
| 82 | 3300042145 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 | Metagenome | Rhizosphere |
| 83 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 84 | 3300042533 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 | Metagenome | Rhizosphere |
| 85 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 86 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 87 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 88 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 89 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 90 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 91 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 92 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 140 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 142 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 151 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 152 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 153 | 8008558824 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 154 | 8008574985 | Streptomyces sp. Jing01 | Isolate | Rhizosphere |
| 155 | 8023623736 | Streptomyces sp. 111WW2 | Isolate | Unclassified |
| 156 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 157 | 8048406513 | Streptomyces heilongjiangensis NEAU-W2 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 65.67 |
| Metatranscriptomes | 0.5 |
| Isolates | 33.83 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.5 |
| Nodule | 1.49 |
| Rhizoplane | 0.5 |
| Rhizosphere | 79.6 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 17.91 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10007890 | 3300003322 | Bacteria | 2045 |
| 2 | rootH1_10036206 | 3300003323 | Bacteria | 6522 |
| 3 | Ga0006562J51391_1097926 | 3300003578 | Bacteria | 2027 |
| 4 | Ga0157369_10096030 | 3300013105 | Bacteria | 3162 |
| 5 | Ga0183367_1007 | 3300015688 | Bacteria | 498079 |
| 6 | Ga0307512_10006803 | 3300030522 | Bacteria | 11479 |
| 7 | Ga0307508_10017062 | 3300031616 | Bacteria | 6603 |
| 8 | Ga0307514_10006176 | 3300031649 | Bacteria | 10510 |
| 9 | Ga0307516_10006118 | 3300031730 | Bacteria | 14188 |
| 10 | Ga0307507_10034014 | 3300033179 | Bacteria | 5277 |
| 11 | Ga0307510_10074908 | 3300033180 | Bacteria | 3340 |
| 12 | Ga0439436_0000752 | 3300041404 | Bacteria | 8765 |
| 13 | Ga0439455_0004208 | 3300042012 | Bacteria | 2833 |
| 14 | Ga0439457_000033 | 3300042014 | Bacteria | 28663 |
| 15 | Ga0439457_000580 | 3300042014 | Bacteria | 10697 |
| 16 | Ga0439462_0015734 | 3300042015 | Bacteria | 1951 |
| 17 | Ga0450894_000444 | 3300042131 | Bacteria | 7074 |
| 18 | Ga0450895_001038 | 3300042132 | Bacteria | 1834 |
| 19 | Ga0450903_000021 | 3300042138 | Bacteria | 30994 |
| 20 | Ga0450906_001568 | 3300042145 | Bacteria | 4993 |
| 21 | Ga0439458_0000466 | 3300042157 | Bacteria | 10312 |
| 22 | Ga0450901_005009 | 3300042533 | Bacteria | 1363 |
| 23 | Ga0466969_0040656 | 3300044656 | Bacteria | 2329 |
| 24 | Ga0466972_0001295 | 3300044658 | Bacteria | 12079 |
| 25 | Ga0466972_0021933 | 3300044658 | Bacteria | 3181 |
| 26 | Ga0466972_0038368 | 3300044658 | Bacteria | 2340 |
| 27 | Ga0466965_0041055 | 3300044683 | Bacteria | 2279 |
| 28 | Ga0466966_0050244 | 3300044684 | Bacteria | 2653 |
| 29 | Ga0466961_0001776 | 3300044693 | Bacteria | 13361 |
| 30 | Ga0466963_0012026 | 3300044694 | Bacteria | 5287 |
| 31 | Ga0466970_0002150 | 3300044765 | Bacteria | 9516 |
| 32 | Ga0495617_043019 | 3300046452 | Bacteria | 1508 |
| 33 | Ga0495592_0023717 | 3300046454 | Bacteria | 4666 |
| 34 | Ga0495603_0001595 | 3300046455 | Bacteria | 13296 |
| 35 | Ga0495603_0020359 | 3300046455 | Bacteria | 4021 |
| 36 | Ga0495603_0030065 | 3300046455 | Bacteria | 3273 |
| 37 | Ga0495603_0041969 | 3300046455 | Bacteria | 2735 |
| 38 | Ga0495629_0000626 | 3300046459 | Bacteria | 28709 |
| 39 | Ga0495629_0000757 | 3300046459 | Bacteria | 26096 |
| 40 | Ga0495629_0021648 | 3300046459 | Bacteria | 4588 |
| 41 | Ga0495629_0037897 | 3300046459 | Bacteria | 3397 |
| 42 | Ga0495651_0003200 | 3300046462 | Bacteria | 12585 |
| 43 | Ga0495651_0068975 | 3300046462 | Bacteria | 2694 |
| 44 | Ga0495605_0026369 | 3300046474 | Bacteria | 3021 |
| 45 | Ga0495662_0003822 | 3300046476 | Bacteria | 7593 |
| 46 | Ga0495662_0029151 | 3300046476 | Bacteria | 2665 |
| 47 | Ga0495664_0000395 | 3300046477 | Bacteria | 21368 |
| 48 | Ga0495594_0095531 | 3300046499 | Bacteria | 1669 |
| 49 | Ga0495596_0079823 | 3300046500 | Bacteria | 1270 |
| 50 | Ga0495583_0009831 | 3300046506 | Bacteria | 5667 |
| 51 | Ga0495616_0016020 | 3300046513 | Bacteria | 4155 |
| 52 | Ga0495618_0045923 | 3300046514 | Bacteria | 2756 |
| 53 | Ga0495620_0027415 | 3300046515 | Bacteria | 2665 |
| 54 | Ga0495620_0032826 | 3300046515 | Bacteria | 2361 |
| 55 | Ga0495628_0012874 | 3300046516 | Bacteria | 7044 |
| 56 | Ga0495628_0115299 | 3300046516 | Bacteria | 2063 |
| 57 | Ga0495630_0083938 | 3300046517 | Bacteria | 2405 |
| 58 | Ga0495631_0039708 | 3300046518 | Bacteria | 2087 |
| 59 | Ga0495632_0032711 | 3300046519 | Bacteria | 2677 |
| 60 | Ga0495643_0002536 | 3300046522 | Bacteria | 14308 |
| 61 | Ga0495652_0014920 | 3300046529 | Bacteria | 6962 |
| 62 | Ga0495652_0060537 | 3300046529 | Bacteria | 3199 |
| 63 | Ga0495640_0019117 | 3300046533 | Bacteria | 5062 |
| 64 | Ga0495640_0078827 | 3300046533 | Bacteria | 2194 |
| 65 | Ga0495587_0000629 | 3300046536 | Bacteria | 23745 |
| 66 | Ga0495597_0016438 | 3300046542 | Bacteria | 3492 |
| 67 | Ga0495597_0051822 | 3300046542 | Bacteria | 1808 |
| 68 | Ga0495622_0008069 | 3300046557 | Bacteria | 4882 |
| 69 | Ga0495622_0036662 | 3300046557 | Bacteria | 2286 |
| 70 | Ga0495667_0052050 | 3300046559 | Bacteria | 2699 |
| 71 | Ga0495668_0010990 | 3300046616 | Bacteria | 5446 |
| 72 | Ga0495634_0048821 | 3300046642 | Bacteria | 2847 |
| 73 | Ga0495611_0044838 | 3300046648 | Bacteria | 1978 |
| 74 | Ga0495625_0225782 | 3300046660 | Bacteria | 1225 |
| 75 | Ga0495635_0001215 | 3300046663 | Bacteria | 17230 |
| 76 | Ga0495661_0055764 | 3300046665 | Bacteria | 2367 |
| 77 | Ga0495657_0001364 | 3300046675 | Bacteria | 21209 |
| 78 | Ga0495657_0017290 | 3300046675 | Bacteria | 5238 |
| 79 | Ga0495623_0149091 | 3300046679 | Bacteria | 1384 |
| 80 | Ga0495646_0000410 | 3300046680 | Bacteria | 22602 |
| 81 | Ga0495613_0000567 | 3300046689 | Bacteria | 30412 |
| 82 | Ga0495613_0011492 | 3300046689 | Bacteria | 6585 |
| 83 | Ga0495613_0019450 | 3300046689 | Bacteria | 5060 |
| 84 | Ga0495613_0032636 | 3300046689 | Bacteria | 3868 |
| 85 | Ga0495613_0068869 | 3300046689 | Bacteria | 2580 |
| 86 | Ga0495649_0019741 | 3300046694 | Bacteria | 3784 |
| 87 | Ga0495589_0011245 | 3300046794 | Bacteria | 4645 |
| 88 | Ga0495589_0026371 | 3300046794 | Bacteria | 2944 |
| 89 | Ga0495589_0026819 | 3300046794 | Bacteria | 2917 |
| 90 | Ga0495589_0054587 | 3300046794 | Bacteria | 1970 |
| 91 | Ga0495604_0019091 | 3300047317 | Bacteria | 5489 |
| 92 | Ga0495636_0028165 | 3300047318 | Bacteria | 2289 |
| 93 | Ga0495676_0007406 | 3300047321 | Bacteria | 10071 |
| 94 | Ga0495676_0137660 | 3300047321 | Bacteria | 1753 |
| 95 | Ga0495680_0005117 | 3300047322 | Bacteria | 12382 |
| 96 | Ga0495683_0059815 | 3300047323 | Bacteria | 1890 |
| 97 | Ga0495675_0044181 | 3300047444 | Bacteria | 2838 |
| 98 | Ga0495685_001581 | 3300047447 | Bacteria | 7008 |
| 99 | Ga0495685_003189 | 3300047447 | Bacteria | 5209 |
| 100 | Ga0495685_017571 | 3300047447 | Bacteria | 2450 |
| 101 | Ga0495593_0001487 | 3300047673 | Bacteria | 13783 |
| 102 | Ga0495614_0000869 | 3300048089 | Bacteria | 12785 |
| 103 | Ga0495614_0044666 | 3300048089 | Bacteria | 1900 |
| 104 | Ga0495626_0031381 | 3300048091 | Bacteria | 2558 |
| 105 | Ga0496108_0042316 | 3300048911 | Bacteria | 3803 |
| 106 | Ga0501034_0001237 | 3300049571 | Bacteria | 34705 |
| 107 | Ga0501034_0044129 | 3300049571 | Bacteria | 4509 |
| 108 | Ga0501034_0237108 | 3300049571 | Bacteria | 1771 |
| 109 | Ga0501036_0000303 | 3300049572 | Bacteria | 34139 |
| 110 | Ga0501036_0011193 | 3300049572 | Bacteria | 7423 |
| 111 | Ga0501036_0125731 | 3300049572 | Bacteria | 2165 |
| 112 | Ga0501037_0007905 | 3300049573 | Bacteria | 7792 |
| 113 | Ga0501037_0191375 | 3300049573 | Bacteria | 1448 |
| 114 | Ga0501043_0002376 | 3300049579 | Bacteria | 15936 |
| 115 | Ga0501043_0005547 | 3300049579 | Bacteria | 10173 |
| 116 | Ga0501046_0008720 | 3300049580 | Bacteria | 8809 |
| 117 | Ga0501046_0227107 | 3300049580 | Bacteria | 1380 |
| 118 | Ga0501047_0011067 | 3300049581 | Bacteria | 8537 |
| 119 | Ga0501047_0014340 | 3300049581 | Bacteria | 7535 |
| 120 | Ga0501047_0020012 | 3300049581 | Bacteria | 6425 |
| 121 | Ga0501047_0071117 | 3300049581 | Bacteria | 3349 |
| 122 | Ga0501047_0128139 | 3300049581 | Bacteria | 2418 |
| 123 | Ga0501048_0008120 | 3300049582 | Bacteria | 7943 |
| 124 | Ga0501074_0000400 | 3300049590 | Bacteria | 25843 |
| 125 | Ga0501080_0121948 | 3300049742 | Bacteria | 2415 |
| 126 | Ga0501035_0002809 | 3300049822 | Bacteria | 16840 |
| 127 | Ga0501035_0109198 | 3300049822 | Bacteria | 2425 |
| 128 | Ga0501044_0023800 | 3300049823 | Bacteria | 6510 |
| 129 | Ga0501044_0037010 | 3300049823 | Bacteria | 5103 |
| 130 | Ga0501044_0183952 | 3300049823 | Bacteria | 2055 |
| 131 | Ga0501044_0282593 | 3300049823 | Bacteria | 1592 |
| 132 | Ga0495619_0041787 | 3300053085 | Bacteria | 3000 |
| 133 | Ga0500600_0024627 | 3300053149 | Bacteria | 3584 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049822 | Ga0501035_0109198 | Ga0501035_0109198_905_2026 | 336 |
| 2 | 3300030522 | Ga0307512_10006803 | Ga0307512_100068037 | 337 |
| 3 | 3300033179 | Ga0307507_10034014 | Ga0307507_100340146 | 339 |
| 4 | 3300046454 | Ga0495592_0023717 | Ga0495592_0023717_450_1550 | 339 |
| 5 | 3300046462 | Ga0495651_0003200 | Ga0495651_0003200_6129_7229 | 339 |
| 6 | 3300046476 | Ga0495662_0003822 | Ga0495662_0003822_357_1457 | 339 |
| 7 | 3300046477 | Ga0495664_0000395 | Ga0495664_0000395_4952_6052 | 339 |
| 8 | 3300046514 | Ga0495618_0045923 | Ga0495618_0045923_68_1168 | 339 |
| 9 | 3300046516 | Ga0495628_0012874 | Ga0495628_0012874_5010_6110 | 339 |
| 10 | 3300046517 | Ga0495630_0083938 | Ga0495630_0083938_136_1236 | 339 |
| 11 | 3300046529 | Ga0495652_0014920 | Ga0495652_0014920_1059_2159 | 339 |
| 12 | 3300046533 | Ga0495640_0078827 | Ga0495640_0078827_47_1147 | 339 |
| 13 | 3300046536 | Ga0495587_0000629 | Ga0495587_0000629_9178_10278 | 339 |
| 14 | 3300046557 | Ga0495622_0036662 | Ga0495622_0036662_1009_2109 | 339 |
| 15 | 3300046642 | Ga0495634_0048821 | Ga0495634_0048821_57_1157 | 339 |
| 16 | 3300046663 | Ga0495635_0001215 | Ga0495635_0001215_6657_7757 | 339 |
| 17 | 3300046675 | Ga0495657_0001364 | Ga0495657_0001364_4997_6097 | 339 |
| 18 | 3300046680 | Ga0495646_0000410 | Ga0495646_0000410_2740_3840 | 339 |
| 19 | 3300046689 | Ga0495613_0000567 | Ga0495613_0000567_1251_2351 | 339 |
| 20 | 3300047317 | Ga0495604_0019091 | Ga0495604_0019091_3109_4209 | 339 |
| 21 | 3300047321 | Ga0495676_0007406 | Ga0495676_0007406_5503_6603 | 339 |
| 22 | 3300047673 | Ga0495593_0001487 | Ga0495593_0001487_12644_13744 | 339 |
| 23 | 3300048089 | Ga0495614_0044666 | Ga0495614_0044666_254_1354 | 339 |
| 24 | 3300053085 | Ga0495619_0041787 | Ga0495619_0041787_219_1319 | 339 |
| 25 | 3300003323 | rootH1_10036206 | rootH1_100362063 | 340 |
| 26 | 3300031616 | Ga0307508_10017062 | Ga0307508_100170626 | 341 |
| 27 | 3300047447 | Ga0495685_003189 | Ga0495685_003189_117_1238 | 344 |
| 28 | 3300053149 | Ga0500600_0024627 | Ga0500600_0024627_733_1854 | 344 |
| 29 | 3300049581 | Ga0501047_0020012 | Ga0501047_0020012_4153_5223 | 345 |
| 30 | 3300049581 | Ga0501047_0071117 | Ga0501047_0071117_613_1683 | 345 |
| 31 | 3300049742 | Ga0501080_0121948 | Ga0501080_0121948_824_1894 | 345 |
| 32 | 3300049823 | Ga0501044_0023800 | Ga0501044_0023800_2907_3977 | 345 |
| 33 | iso_pu_bacteria | 2935390628 | 2935394375 | 345 |
| 34 | 3300044656 | Ga0466969_0040656 | Ga0466969_0040656_969_2090 | 348 |
| 35 | 3300044658 | Ga0466972_0021933 | Ga0466972_0021933_2038_3159 | 348 |
| 36 | 3300044684 | Ga0466966_0050244 | Ga0466966_0050244_96_1217 | 348 |
| 37 | 3300044693 | Ga0466961_0001776 | Ga0466961_0001776_6205_7326 | 348 |
| 38 | 3300046455 | Ga0495603_0020359 | Ga0495603_0020359_263_1369 | 349 |
| 39 | 3300046459 | Ga0495629_0000626 | Ga0495629_0000626_25097_26203 | 349 |
| 40 | 3300046557 | Ga0495622_0008069 | Ga0495622_0008069_2270_3376 | 349 |
| 41 | iso_pu_bacteria | 2862178590 | 2862183209 | 349 |
| 42 | 3300046459 | Ga0495629_0000757 | Ga0495629_0000757_8598_9809 | 350 |
| 43 | 3300046689 | Ga0495613_0011492 | Ga0495613_0011492_3368_4579 | 350 |
| 44 | iso_pu_bacteria | 2784132148 | 2784587121 | 350 |
| 45 | iso_pu_bacteria | 2808606448 | 2809230681 | 350 |
| 46 | iso_pu_bacteria | 2877676314 | 2877682939 | 350 |
| 47 | iso_pu_bacteria | 8023623736 | 8023625181 | 350 |
| 48 | iso_pu_bacteria | 2582581312 | 2585298593 | 351 |
| 49 | iso_pu_bacteria | 2582581313 | 2585307529 | 351 |
| 50 | iso_pu_bacteria | 2616644941 | 2616899178 | 351 |
| 51 | iso_pu_bacteria | 2643221548 | 2643762584 | 351 |
| 52 | iso_pu_bacteria | 2643221578 | 2643897118 | 351 |
| 53 | iso_pu_bacteria | 2643221647 | 2644270790 | 351 |
| 54 | iso_pu_bacteria | 2643221673 | 2644408262 | 351 |
| 55 | iso_pu_bacteria | 2643221678 | 2644435470 | 351 |
| 56 | iso_pu_bacteria | 2643221682 | 2644460904 | 351 |
| 57 | iso_pu_bacteria | 2643221714 | 2644630527 | 351 |
| 58 | iso_pu_bacteria | 2784746763 | 2785345283 | 351 |
| 59 | iso_pu_bacteria | 2784746768 | 2785367609 | 351 |
| 60 | iso_pu_bacteria | 2786546132 | 2786668670 | 351 |
| 61 | iso_pu_bacteria | 2802429296 | 2804844187 | 351 |
| 62 | iso_pu_bacteria | 2808606359 | 2808848092 | 351 |
| 63 | iso_pu_bacteria | 2811994879 | 2812359910 | 351 |
| 64 | iso_pu_bacteria | 2811994917 | 2812481976 | 351 |
| 65 | iso_pu_bacteria | 2818991463 | 2819694388 | 351 |
| 66 | iso_pu_bacteria | 2852635781 | 2852638120 | 351 |
| 67 | iso_pu_bacteria | 2862281513 | 2862289032 | 351 |
| 68 | iso_pu_bacteria | 2862290372 | 2862293104 | 351 |
| 69 | iso_pu_bacteria | 2862382967 | 2862390618 | 351 |
| 70 | iso_pu_bacteria | 2863404153 | 2863406529 | 351 |
| 71 | iso_pu_bacteria | 2875391855 | 2875393073 | 351 |
| 72 | iso_pu_bacteria | 2912757875 | 2912759257 | 351 |
| 73 | iso_pu_bacteria | 2919468124 | 2919475047 | 351 |
| 74 | iso_pu_bacteria | 2946045630 | 2946051626 | 351 |
| 75 | iso_pu_bacteria | 2946064051 | 2946065996 | 351 |
| 76 | iso_pu_bacteria | 2954002825 | 2954004659 | 351 |
| 77 | iso_pu_bacteria | 2954673503 | 2954674949 | 351 |
| 78 | iso_pu_bacteria | 2954682443 | 2954689186 | 351 |
| 79 | iso_pu_bacteria | 2954749733 | 2954752807 | 351 |
| 80 | iso_pu_bacteria | 2966598605 | 2966603991 | 351 |
| 81 | iso_pu_bacteria | 2990059506 | 2990066223 | 351 |
| 82 | iso_pu_bacteria | 3006425503 | 3006428932 | 351 |
| 83 | iso_pu_bacteria | 3006493962 | 3006496605 | 351 |
| 84 | iso_pu_bacteria | 8008558824 | 8008561783 | 351 |
| 85 | iso_pu_bacteria | 8008574985 | 8008580353 | 351 |
| 86 | iso_pu_bacteria | 8025413630 | 8025413913 | 351 |
| 87 | iso_pu_bacteria | 8048406513 | 8048407825 | 351 |
| 88 | 3300041404 | Ga0439436_0000752 | Ga0439436_0000752_6313_7434 | 352 |
| 89 | 3300042014 | Ga0439457_000580 | Ga0439457_000580_972_2093 | 352 |
| 90 | 3300049571 | Ga0501034_0044129 | Ga0501034_0044129_396_1490 | 352 |
| 91 | 3300049571 | Ga0501034_0237108 | Ga0501034_0237108_84_1178 | 352 |
| 92 | 3300049572 | Ga0501036_0125731 | Ga0501036_0125731_747_1841 | 352 |
| 93 | 3300049573 | Ga0501037_0007905 | Ga0501037_0007905_2682_3776 | 352 |
| 94 | 3300049573 | Ga0501037_0191375 | Ga0501037_0191375_226_1320 | 352 |
| 95 | 3300049579 | Ga0501043_0005547 | Ga0501043_0005547_3199_4293 | 352 |
| 96 | 3300049580 | Ga0501046_0008720 | Ga0501046_0008720_331_1425 | 352 |
| 97 | 3300049580 | Ga0501046_0227107 | Ga0501046_0227107_272_1366 | 352 |
| 98 | 3300049581 | Ga0501047_0011067 | Ga0501047_0011067_617_1711 | 352 |
| 99 | 3300049581 | Ga0501047_0014340 | Ga0501047_0014340_4371_5465 | 352 |
| 100 | 3300049582 | Ga0501048_0008120 | Ga0501048_0008120_5944_7038 | 352 |
| 101 | 3300049822 | Ga0501035_0002809 | Ga0501035_0002809_3652_4746 | 352 |
| 102 | 3300049823 | Ga0501044_0037010 | Ga0501044_0037010_49_1143 | 352 |
| 103 | 3300049823 | Ga0501044_0282593 | Ga0501044_0282593_103_1197 | 352 |
| 104 | iso_pu_bacteria | 2643221587 | 2643945415 | 352 |
| 105 | iso_pu_bacteria | 2643221677 | 2644432314 | 352 |
| 106 | iso_pu_bacteria | 2862507626 | 2862508515 | 352 |
| 107 | 3300047323 | Ga0495683_0059815 | Ga0495683_0059815_476_1591 | 353 |
| 108 | iso_pu_bacteria | 2554235005 | 2554259188 | 353 |
| 109 | iso_pu_bacteria | 2643221670 | 2644387638 | 353 |
| 110 | iso_pu_bacteria | 2918501144 | 2918502938 | 353 |
| 111 | 3300042533 | Ga0450901_005009 | Ga0450901_005009_226_1344 | 354 |
| 112 | 3300049823 | Ga0501044_0183952 | Ga0501044_0183952_540_1691 | 354 |
| 113 | 3300003322 | rootL2_10007890 | rootL2_100078902 | 355 |
| 114 | 3300003578 | Ga0006562J51391_1097926 | Ga0006562J51391_10979263 | 355 |
| 115 | 3300013105 | Ga0157369_10096030 | Ga0157369_100960303 | 355 |
| 116 | 3300015688 | Ga0183367_1007 | Ga0183367_1007101 | 355 |
| 117 | 3300031649 | Ga0307514_10006176 | Ga0307514_100061765 | 355 |
| 118 | 3300031730 | Ga0307516_10006118 | Ga0307516_100061181 | 355 |
| 119 | 3300033180 | Ga0307510_10074908 | Ga0307510_100749084 | 355 |
| 120 | 3300042012 | Ga0439455_0004208 | Ga0439455_0004208_1318_2490 | 355 |
| 121 | 3300042014 | Ga0439457_000033 | Ga0439457_000033_20919_22022 | 355 |
| 122 | 3300042015 | Ga0439462_0015734 | Ga0439462_0015734_13_1134 | 355 |
| 123 | 3300042131 | Ga0450894_000444 | Ga0450894_000444_210_1316 | 355 |
| 124 | 3300042132 | Ga0450895_001038 | Ga0450895_001038_687_1793 | 355 |
| 125 | 3300042138 | Ga0450903_000021 | Ga0450903_000021_20604_21776 | 355 |
| 126 | 3300042145 | Ga0450906_001568 | Ga0450906_001568_3675_4781 | 355 |
| 127 | 3300042157 | Ga0439458_0000466 | Ga0439458_0000466_3042_4214 | 355 |
| 128 | 3300044658 | Ga0466972_0001295 | Ga0466972_0001295_10910_12010 | 355 |
| 129 | 3300044658 | Ga0466972_0038368 | Ga0466972_0038368_163_1287 | 355 |
| 130 | 3300044683 | Ga0466965_0041055 | Ga0466965_0041055_145_1245 | 355 |
| 131 | 3300044694 | Ga0466963_0012026 | Ga0466963_0012026_431_1549 | 355 |
| 132 | 3300044765 | Ga0466970_0002150 | Ga0466970_0002150_1312_2415 | 355 |
| 133 | 3300046452 | Ga0495617_043019 | Ga0495617_043019_37_1176 | 355 |
| 134 | 3300046455 | Ga0495603_0001595 | Ga0495603_0001595_7767_8888 | 355 |
| 135 | 3300046455 | Ga0495603_0030065 | Ga0495603_0030065_373_1494 | 355 |
| 136 | 3300046455 | Ga0495603_0041969 | Ga0495603_0041969_425_1564 | 355 |
| 137 | 3300046459 | Ga0495629_0021648 | Ga0495629_0021648_22_1143 | 355 |
| 138 | 3300046459 | Ga0495629_0037897 | Ga0495629_0037897_1065_2186 | 355 |
| 139 | 3300046462 | Ga0495651_0068975 | Ga0495651_0068975_502_1623 | 355 |
| 140 | 3300046474 | Ga0495605_0026369 | Ga0495605_0026369_84_1205 | 355 |
| 141 | 3300046476 | Ga0495662_0029151 | Ga0495662_0029151_926_2047 | 355 |
| 142 | 3300046499 | Ga0495594_0095531 | Ga0495594_0095531_435_1574 | 355 |
| 143 | 3300046500 | Ga0495596_0079823 | Ga0495596_0079823_29_1150 | 355 |
| 144 | 3300046506 | Ga0495583_0009831 | Ga0495583_0009831_1435_2670 | 355 |
| 145 | 3300046513 | Ga0495616_0016020 | Ga0495616_0016020_1079_2200 | 355 |
| 146 | 3300046515 | Ga0495620_0027415 | Ga0495620_0027415_1212_2447 | 355 |
| 147 | 3300046515 | Ga0495620_0032826 | Ga0495620_0032826_1198_2319 | 355 |
| 148 | 3300046516 | Ga0495628_0115299 | Ga0495628_0115299_316_1437 | 355 |
| 149 | 3300046518 | Ga0495631_0039708 | Ga0495631_0039708_160_1281 | 355 |
| 150 | 3300046519 | Ga0495632_0032711 | Ga0495632_0032711_1399_2520 | 355 |
| 151 | 3300046522 | Ga0495643_0002536 | Ga0495643_0002536_10089_11324 | 355 |
| 152 | 3300046529 | Ga0495652_0060537 | Ga0495652_0060537_1932_3053 | 355 |
| 153 | 3300046533 | Ga0495640_0019117 | Ga0495640_0019117_3031_4152 | 355 |
| 154 | 3300046542 | Ga0495597_0016438 | Ga0495597_0016438_526_1647 | 355 |
| 155 | 3300046542 | Ga0495597_0051822 | Ga0495597_0051822_117_1352 | 355 |
| 156 | 3300046559 | Ga0495667_0052050 | Ga0495667_0052050_117_1238 | 355 |
| 157 | 3300046616 | Ga0495668_0010990 | Ga0495668_0010990_2218_3339 | 355 |
| 158 | 3300046648 | Ga0495611_0044838 | Ga0495611_0044838_572_1693 | 355 |
| 159 | 3300046660 | Ga0495625_0225782 | Ga0495625_0225782_33_1172 | 355 |
| 160 | 3300046665 | Ga0495661_0055764 | Ga0495661_0055764_1200_2321 | 355 |
| 161 | 3300046675 | Ga0495657_0017290 | Ga0495657_0017290_2908_4029 | 355 |
| 162 | 3300046679 | Ga0495623_0149091 | Ga0495623_0149091_118_1239 | 355 |
| 163 | 3300046689 | Ga0495613_0019450 | Ga0495613_0019450_931_2052 | 355 |
| 164 | 3300046689 | Ga0495613_0032636 | Ga0495613_0032636_1759_2880 | 355 |
| 165 | 3300046689 | Ga0495613_0068869 | Ga0495613_0068869_707_1828 | 355 |
| 166 | 3300046694 | Ga0495649_0019741 | Ga0495649_0019741_2161_3282 | 355 |
| 167 | 3300046794 | Ga0495589_0011245 | Ga0495589_0011245_2117_3352 | 355 |
| 168 | 3300046794 | Ga0495589_0026371 | Ga0495589_0026371_1054_2202 | 355 |
| 169 | 3300046794 | Ga0495589_0026819 | Ga0495589_0026819_684_1805 | 355 |
| 170 | 3300046794 | Ga0495589_0054587 | Ga0495589_0054587_72_1193 | 355 |
| 171 | 3300047318 | Ga0495636_0028165 | Ga0495636_0028165_13_1134 | 355 |
| 172 | 3300047321 | Ga0495676_0137660 | Ga0495676_0137660_160_1281 | 355 |
| 173 | 3300047322 | Ga0495680_0005117 | Ga0495680_0005117_3885_5006 | 355 |
| 174 | 3300047444 | Ga0495675_0044181 | Ga0495675_0044181_1012_2178 | 355 |
| 175 | 3300047447 | Ga0495685_001581 | Ga0495685_001581_5789_6910 | 355 |
| 176 | 3300047447 | Ga0495685_017571 | Ga0495685_017571_410_1531 | 355 |
| 177 | 3300048089 | Ga0495614_0000869 | Ga0495614_0000869_11553_12764 | 355 |
| 178 | 3300048091 | Ga0495626_0031381 | Ga0495626_0031381_123_1244 | 355 |
| 179 | 3300048911 | Ga0496108_0042316 | Ga0496108_0042316_2404_3525 | 355 |
| 180 | 3300049571 | Ga0501034_0001237 | Ga0501034_0001237_28284_29447 | 355 |
| 181 | 3300049572 | Ga0501036_0000303 | Ga0501036_0000303_3301_4464 | 355 |
| 182 | 3300049572 | Ga0501036_0011193 | Ga0501036_0011193_4092_5192 | 355 |
| 183 | 3300049579 | Ga0501043_0002376 | Ga0501043_0002376_4005_5168 | 355 |
| 184 | 3300049581 | Ga0501047_0128139 | Ga0501047_0128139_932_2095 | 355 |
| 185 | 3300049590 | Ga0501074_0000400 | Ga0501074_0000400_3356_4519 | 355 |
| 186 | iso_pu_bacteria | 2616644814 | 2616693962 | 355 |
| 187 | iso_pu_bacteria | 2808606375 | 2808918857 | 355 |
| 188 | iso_pu_bacteria | 2862574272 | 2862583259 | 355 |
| 189 | iso_pu_bacteria | 2867428634 | 2867432846 | 355 |
| 190 | iso_pu_bacteria | 2873151551 | 2873157286 | 355 |
| 191 | iso_pu_bacteria | 2912715099 | 2912721946 | 355 |
| 192 | iso_pu_bacteria | 2912723979 | 2912725722 | 355 |
| 193 | iso_pu_bacteria | 2946072368 | 2946074315 | 355 |
| 194 | iso_pu_bacteria | 2954380949 | 2954388150 | 355 |
| 195 | iso_pu_bacteria | 2954691527 | 2954698956 | 355 |
| 196 | iso_pu_bacteria | 2954701450 | 2954703265 | 355 |
| 197 | iso_pu_bacteria | 2954711539 | 2954717914 | 355 |
| 198 | iso_pu_bacteria | 2954721474 | 2954727880 | 355 |
| 199 | iso_pu_bacteria | 2954731030 | 2954733924 | 355 |
| 200 | iso_pu_bacteria | 2954740390 | 2954746778 | 355 |
| 201 | iso_pu_bacteria | 2954759201 | 2954765888 | 355 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3f0h-assembly1.cif.gz_A-2 | crystal structure of aminotransferase (rer070207000802) from eubacterium rectale at 1.70 a resolution | 0.8797 | 13 | 273 |
| 2z9u-assembly1.cif.gz_A | crystal structure of pyridoxamine-pyruvate aminotransferase from mesorhizobium loti at 2.0 a resolution | 0.8748 | 12 | 353 |
| 6mfb-assembly1.cif.gz_B | crystal structure of 3-hydroxykynurenine transaminase from aedes aegypti | 0.8726 | 6 | 337 |
| 1m32-assembly2.cif.gz_C | crystal structure of 2-aminoethylphosphonate transaminase | 0.8714 | 18 | 303 |
| 4cbr-assembly1.cif.gz_A-2 | x-ray structure of the more stable human agxt triple mutant (agxt_hem) | 0.8678 | 13 | 335 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q58369_36_182_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.941 | 13 | 141 | 3.40.640.10 |
| af_Q58369_38_263_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9308 | 13 | 239 | 3.40.640.10 |
| af_F1QY24_50_195_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9201 | 16 | 142 | 3.40.640.10 |
| af_Q58369_38_263_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9191 | 13 | 239 | 3.40.640.10 |
| af_Q9W3Z3_47_193_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9176 | 16 | 142 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7C2KHR0-F1-model_v4 | Alanine--glyoxylate aminotransferase family protein | 0.939 | 13 | 192 |
GO:0004760
GO:0005777 GO:0008453 GO:0019265 |
| AF-A0A345T1W9-F1-model_v4 | Alanine--glyoxylate aminotransferase family protein | 0.9352 | 3 | 355 |
GO:0004760
GO:0005777 GO:0008453 GO:0019265 |
| AF-A0A662PF11-F1-model_v4 | Aminotransferase | 0.9285 | 5 | 182 |
GO:0004760
GO:0005777 GO:0008453 GO:0019265 |
| AF-A0A5N9HG60-F1-model_v4 | Alanine--glyoxylate aminotransferase family protein | 0.9283 | 13 | 241 |
GO:0004760
GO:0005777 GO:0008453 GO:0019265 |
| AF-A0A4R3BF60-F1-model_v4 | deleted | 0.9278 | 1 | 353 |
|
Predicted Structure (AlphaFold2)
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