F303733

General Info

Members Datasets Scaffolds Average Seq Length
197 194 44 327

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2924710171|2924711996
Length 365
Sequence ATMHLAVSLFPGIADPSPEPGFSRLTGFVQKAEAAGLDMVLLADSAPASGGGAANSPMPFEATTLLAALATVTSRIGLVAAASTVAHQPYNLARRFASLDIISHGRSGWNATMTQAPREAANFSRPEGFSPDDFRRRSEEYIGIVQGLWRGWDADALLFAQSGGRFHDPEKVHLLDHKGGFFSVRGPLNVARSPQDTPVLVLSDLSEADLDIAARTADVILLDDGPLDGTTERYDDIRRRVTGCGRDPDAVKVLTNVAPTANSKLAALADRLEKEFRARGCDGFNILMPAQLSALDDFVDLVLPELRQRGLFRENYRGTTLRSHLGLAGGGDRCPLARSSSAPSCGRQATTSRPGAIPRCTSPPA

Samples

Sample ID Description Type Environment
1 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
2 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
3 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
4 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
5 2512875024 Mesorhizobium loti R88b Isolate Nodule
6 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
7 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
8 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
9 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
10 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
11 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
12 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
13 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
14 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
15 2856334872 Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 Isolate Nodule
16 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
17 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
18 2869169390 Mesorhizobium sp. M7A.F.Ca.CA.001.10.2.1 Isolate Nodule
19 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
20 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
21 2869249662 Mesorhizobium sp. M7A.F.Ca.CA.001.16.1.1 Isolate Nodule
22 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
23 2869264136 Mesorhizobium sp. M7A.F.Ca.CA.001.15.1.1 Isolate Nodule
24 2869271264 Mesorhizobium sp. M7A.F.Ca.AU.002.06.1.1 Isolate Nodule
25 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
26 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
27 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
28 2871459585 Mesorhizobium sp. M7A.F.Ca.CA.001.09.1.1 Isolate Nodule
29 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
30 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
31 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
32 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
33 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
34 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
35 2874131515 Mesorhizobium sp. M7A.F.Ca.CA.001.05.1.1 Isolate Nodule
36 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
37 2874162495 Mesorhizobium sp. M7A.F.Ca.CA.002.11.2.1 Isolate Nodule
38 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
39 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
40 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
41 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
42 2876399893 Mesorhizobium sp. M7A.F.Ca.AU.002.03.1.1 Isolate Nodule
43 2876406927 Mesorhizobium sp. M7A.F.Ca.CA.002.03.2.1 Isolate Nodule
44 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
45 2878730984 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.1 Isolate Nodule
46 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
47 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
48 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
49 2878774303 Mesorhizobium sp. M7A.F.Ca.CA.002.15.1.1 Isolate Nodule
50 2878781027 Mesorhizobium sp. M7A.F.Ca.CA.001.12.2.1 Isolate Nodule
51 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
52 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
53 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
54 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
55 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
56 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
57 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
58 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
59 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
60 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
61 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
62 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
63 2903513507 Mesorhizobium sp. M7A.T.Ca.TU.009.01.1.2 Isolate Nodule
64 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
65 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
66 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
67 2906363423 Mesorhizobium sp. M7A.F.Ca.CA.001.14.1.1 Isolate Nodule
68 2906370794 Mesorhizobium sp. M7A.F.Ca.CA.001.13.1.1 Isolate Nodule
69 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
70 2906386501 Mesorhizobium sp. M7A.F.Ca.CA.003.01.2.1 Isolate Nodule
71 2906393657 Mesorhizobium sp. M7A.F.Ca.CA.001.11.2.1 Isolate Nodule
72 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
73 2906408224 Mesorhizobium sp. M7A.F.Ca.CA.002.03.1.1 Isolate Nodule
74 2906427513 Mesorhizobium sp. M7A.F.Ca.CA.004.05.1.1 Isolate Nodule
75 2922151315 Mesorhizobium sp. M7A.F.Ca.US.007.01.2.1 Isolate Nodule
76 2922172374 Mesorhizobium sp. M7A.F.Ca.CA.002.06.1.1 Isolate Nodule
77 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
78 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
79 2924741084 Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 Isolate Nodule
80 2924748358 Mesorhizobium sp. M7A.F.Ca.CA.002.14.1.2 Isolate Nodule
81 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
82 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
83 2937861824 Mesorhizobium sp. M7A.F.Ca.CA.001.07.2.1 Isolate Nodule
84 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
85 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
86 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
87 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
88 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
89 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
90 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
91 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
92 2958122699 Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 Isolate Nodule
93 2958137437 Mesorhizobium sp. M7A.F.Ca.CA.002.04.1.1 Isolate Nodule
94 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
95 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
96 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
97 2961136820 Mesorhizobium sp. M7A.F.Ca.AU.001.01.1.1 Isolate Nodule
98 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
99 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
100 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
101 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
102 2965025482 Mesorhizobium sp. Primo-A Isolate Nodule
103 2965032056 Mesorhizobium sp. M7A.F.Ca.US.006.04.2.1 Isolate Nodule
104 2965047637 Mesorhizobium sp. M7A.F.Ca.US.014.04.1.1 Isolate Nodule
105 2965089291 Mesorhizobium sp. M7A.F.Ca.CA.001.04.1.1 Isolate Nodule
106 2965110997 Mesorhizobium sp. M7A.F.Ca.US.003.02.2.1 Isolate Nodule
107 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
108 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
109 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
110 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
111 2968138860 Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1 Isolate Nodule
112 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
113 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
114 2970489779 Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 Isolate Nodule
115 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
116 2970532167 Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 Isolate Nodule
117 2970547951 Mesorhizobium sp. M7A.F.Ca.AU.002.04.1.1 Isolate Nodule
118 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
119 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
120 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
121 2970627176 Mesorhizobium sp. M7A.F.Ca.US.006.01.2.1 Isolate Nodule
122 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
123 2977872689 Mesorhizobium sp. M7A.F.Ca.US.001.04.1.1 Isolate Nodule
124 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
125 2977915119 Mesorhizobium sp. M7A.F.Ca.CA.001.09.2.1 Isolate Nodule
126 2977935797 Mesorhizobium sp. M7A.F.Ca.CA.002.12.1.1 Isolate Nodule
127 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
128 2977950692 Mesorhizobium sp. M7A.F.Ca.CA.001.04.2.1 Isolate Nodule
129 2979764755 Mesorhizobium sp. M7A.F.Ca.CA.004.05.2.1 Isolate Nodule
130 2979793036 Mesorhizobium sp. M7A.F.Ca.US.007.01.1.1 Isolate Nodule
131 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
132 2987645492 Mesorhizobium sp. M7A.F.Ca.CA.002.10.1.1 Isolate Nodule
133 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
134 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
135 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
136 2987673487 Mesorhizobium sp. M7A.F.Ca.US.003.02.1.1 Isolate Nodule
137 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
138 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
139 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
140 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
141 3004195979 Mesorhizobium sp. M7A.F.Ca.CA.001.08.2.1 Isolate Nodule
142 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
143 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
144 3004239961 Mesorhizobium sp. M7A.F.Ca.US.005.03.2.1 Isolate Nodule
145 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
146 3004268573 Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 Isolate Nodule
147 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
148 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
149 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
150 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
151 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
152 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
153 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
154 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
155 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
156 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
157 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
158 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
159 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
160 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
161 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
162 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
163 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
164 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
165 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
166 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
167 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
168 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
172 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
176 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
177 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
178 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
180 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
181 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
182 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
183 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
184 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
185 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
186 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
187 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
188 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
189 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
190 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
191 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
192 8004300914 Mesorhizobium sp. M7A.F.Ca.CA.002.07.1.1 Isolate Nodule
193 8004361976 Mesorhizobium sp. M7A.F.Ca.CA.001.08.1.1 Isolate Nodule
194 8004695233 Mesorhizobium sp. M7A.F.Ca.US.001.01.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 22.34
Metatranscriptomes 0
Isolates 77.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.57
Nodule 71.07
Rhizoplane 0.51
Rhizosphere 16.24
Stem 0
Stem Tuber 0
Unclassified 7.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10004046 3300001989 Bacteria 5607
2 JGI24735J21928_10042907 3300002067 Bacteria 1316
3 JGI25157J39369_1001146 3300002741 Bacteria 11504
4 Ga0068867_100036842 3300005459 Bacteria 3553
5 Ga0070665_100096725 3300005548 Bacteria 2958
6 Ga0068855_100270895 3300005563 Bacteria 1888
7 Ga0068855_100610739 3300005563 Bacteria 1175
8 Ga0075365_10018649 3300006038 Bacteria 4270
9 Ga0075363_100060714 3300006048 Bacteria 2036
10 Ga0075367_10055906 3300006178 Bacteria 2343
11 Ga0075369_10127275 3300006186 Bacteria 1156
12 Ga0105241_10082108 3300009174 Bacteria 2526
13 Ga0105238_10105946 3300009551 Bacteria 2793
14 Ga0105239_10036505 3300010375 Bacteria 5396
15 Ga0105239_10243569 3300010375 Bacteria 2018
16 Ga0157370_10244748 3300013104 Bacteria 1659
17 Ga0157374_10330182 3300013296 Bacteria 1513
18 Ga0157372_10491880 3300013307 Bacteria 1430
19 Ga0209026_1000050 3300025250 Bacteria 254994
20 Ga0209759_1000233 3300025256 Bacteria 83273
21 Ga0209233_1018698 3300025261 Bacteria 1858
22 Ga0207647_10022997 3300025904 Bacteria 4132
23 Ga0207705_10053040 3300025909 Bacteria 2921
24 Ga0207654_10267233 3300025911 Bacteria 1152
25 Ga0207695_10227425 3300025913 Bacteria 1771
26 Ga0207657_10135653 3300025919 Bacteria 2014
27 Ga0207694_10187395 3300025924 Bacteria 1680
28 Ga0207694_10248369 3300025924 Bacteria 1455
29 Ga0207650_10437116 3300025925 Bacteria 1087
30 Ga0207639_10380662 3300026041 Bacteria 1267
31 Ga0207702_10103697 3300026078 Bacteria 2516
32 Ga0207698_10039447 3300026142 Bacteria 3499
33 Ga0268266_10451065 3300028379 Bacteria 1223
34 Ga0395900_0169948 3300037418 Bacteria 2220
35 Ga0395905_0055169 3300037471 Bacteria 3719
36 Ga0439455_0026807 3300042012 Bacteria 1409
37 Ga0466972_0110273 3300044658 Bacteria 1300
38 Ga0495638_0027378 3300046460 Bacteria 3690
39 Ga0495625_0051123 3300046660 Bacteria 2964
40 Ga0496102_0228110 3300048905 Bacteria 1756
41 nmdc:mga03683_79288_c1 3300050489 Bacteria 1415
42 nmdc:mga00v17_300303_c1 3300050491 Bacteria 1043
43 Ga0500610_0014776 3300053079 Bacteria 3674
44 Ga0500620_017143 3300053155 Bacteria 2084

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2965089291 2965095625 285
2 iso_pu_bacteria 2878774303 2878778295 299
3 iso_pu_bacteria 2906386501 2906387318 301
4 iso_pu_bacteria 2924762789 2924763991 309
5 iso_pu_bacteria 2987666974 2987667527 309
6 iso_pu_bacteria 2871495908 2871498936 310
7 iso_pu_bacteria 2878760144 2878763149 310
8 iso_pu_bacteria 2878767105 2878770124 310
9 iso_pu_bacteria 2881147464 2881147917 310
10 iso_pu_bacteria 2903540706 2903543735 310
11 iso_pu_bacteria 2503198000 2503198351 311
12 iso_pu_bacteria 2881155292 2881159049 311
13 iso_pu_bacteria 2881853255 2881859708 311
14 iso_pu_bacteria 2885350715 2885356360 311
15 iso_pu_bacteria 2961127735 2961132094 311
16 3300042012 Ga0439455_0026807 Ga0439455_0026807_31_972 312
17 3300044658 Ga0466972_0110273 Ga0466972_0110273_293_1234 312
18 3300006186 Ga0075369_10127275 Ga0075369_101272751 313
19 3300053079 Ga0500610_0014776 Ga0500610_0014776_1669_2613 313
20 3300028379 Ga0268266_10451065 Ga0268266_104510652 314
21 3300050489 nmdc:mga03683_79288_c1 nmdc:mga03683_79288_c1_176_1126 314
22 iso_pu_bacteria 2588253730 2588520320 314
23 iso_pu_bacteria 2937994558 2937997584 314
24 iso_pu_bacteria 2958165035 2958168057 314
25 iso_pu_bacteria 2961163497 2961166523 314
26 iso_pu_bacteria 2965018300 2965021343 314
27 iso_pu_bacteria 2968171901 2968174927 314
28 iso_pu_bacteria 2970554993 2970557997 314
29 iso_pu_bacteria 2987659509 2987662533 314
30 iso_pu_bacteria 3004188549 3004191583 314
31 iso_pu_bacteria 3004334049 3004337723 314
32 iso_pu_bacteria 2888350351 2888352827 315
33 iso_pu_bacteria 2977942078 2977944168 315
34 iso_pu_bacteria 3004203850 3004210045 315
35 3300025925 Ga0207650_10437116 Ga0207650_104371161 316
36 3300053155 Ga0500620_017143 Ga0500620_017143_253_1227 316
37 iso_pu_bacteria 2857349434 2857352645 316
38 iso_pu_bacteria 2876369609 2876373286 316
39 iso_pu_bacteria 2882632389 2882634715 316
40 iso_pu_bacteria 2958108152 2958108710 316
41 iso_pu_bacteria 2968117919 2968121989 316
42 iso_pu_bacteria 2987636660 2987641238 316
43 iso_pu_bacteria 2987652177 2987652872 316
44 3300006038 Ga0075365_10018649 Ga0075365_100186492 317
45 3300006048 Ga0075363_100060714 Ga0075363_1000607142 317
46 iso_pu_bacteria 2958064165 2958067994 317
47 iso_pu_bacteria 3000135777 3000142558 317
48 3300005548 Ga0070665_100096725 Ga0070665_1000967252 318
49 3300005563 Ga0068855_100270895 Ga0068855_1002708952 318
50 3300006178 Ga0075367_10055906 Ga0075367_100559062 318
51 3300009174 Ga0105241_10082108 Ga0105241_100821082 318
52 3300009551 Ga0105238_10105946 Ga0105238_101059462 318
53 3300010375 Ga0105239_10036505 Ga0105239_100365054 318
54 3300013104 Ga0157370_10244748 Ga0157370_102447482 318
55 3300013296 Ga0157374_10330182 Ga0157374_103301822 318
56 3300025909 Ga0207705_10053040 Ga0207705_100530403 318
57 3300025911 Ga0207654_10267233 Ga0207654_102672332 318
58 3300025913 Ga0207695_10227425 Ga0207695_102274252 318
59 3300025919 Ga0207657_10135653 Ga0207657_101356532 318
60 3300025924 Ga0207694_10187395 Ga0207694_101873952 318
61 3300025924 Ga0207694_10248369 Ga0207694_102483691 318
62 3300026041 Ga0207639_10380662 Ga0207639_103806622 318
63 3300026142 Ga0207698_10039447 Ga0207698_100394473 318
64 3300050491 nmdc:mga00v17_300303_c1 nmdc:mga00v17_300303_c1_13_990 318
65 iso_pu_bacteria 2513237305 2514419255 318
66 iso_pu_bacteria 2721755686 2723572915 318
67 iso_pu_bacteria 2881161766 2881164698 318
68 iso_pu_bacteria 2885318864 2885320595 318
69 3300046660 Ga0495625_0051123 Ga0495625_0051123_1073_2053 319
70 3300005459 Ga0068867_100036842 Ga0068867_1000368422 320
71 iso_pu_bacteria 2687453392 2688595673 320
72 iso_pu_bacteria 2856334872 2856335737 320
73 iso_pu_bacteria 2857367948 2857371093 320
74 iso_pu_bacteria 2869249662 2869250058 320
75 iso_pu_bacteria 2869264136 2869270148 320
76 iso_pu_bacteria 2869271264 2869276210 320
77 iso_pu_bacteria 2871459585 2871466872 320
78 iso_pu_bacteria 2874131515 2874132213 320
79 iso_pu_bacteria 2874162495 2874164761 320
80 iso_pu_bacteria 2876399893 2876403948 320
81 iso_pu_bacteria 2876406927 2876413678 320
82 iso_pu_bacteria 2878781027 2878786414 320
83 iso_pu_bacteria 2885305155 2885306539 320
84 iso_pu_bacteria 2906363423 2906366597 320
85 iso_pu_bacteria 2906370794 2906375590 320
86 iso_pu_bacteria 2906393657 2906401264 320
87 iso_pu_bacteria 2906408224 2906411295 320
88 iso_pu_bacteria 2922151315 2922155064 320
89 iso_pu_bacteria 2922172374 2922177978 320
90 iso_pu_bacteria 2924748358 2924751759 320
91 iso_pu_bacteria 2958122699 2958127157 320
92 iso_pu_bacteria 2958137437 2958142983 320
93 iso_pu_bacteria 2961136820 2961141176 320
94 iso_pu_bacteria 2965025482 2965030291 320
95 iso_pu_bacteria 2965032056 2965039141 320
96 iso_pu_bacteria 2965047637 2965053918 320
97 iso_pu_bacteria 2965110997 2965113632 320
98 iso_pu_bacteria 2968110612 2968115212 320
99 iso_pu_bacteria 2970547951 2970550490 320
100 iso_pu_bacteria 2977872689 2977873716 320
101 iso_pu_bacteria 2977915119 2977921288 320
102 iso_pu_bacteria 2977935797 2977939537 320
103 iso_pu_bacteria 2977950692 2977951518 320
104 iso_pu_bacteria 2979793036 2979795602 320
105 iso_pu_bacteria 2987645492 2987646227 320
106 iso_pu_bacteria 2987673487 2987677999 320
107 iso_pu_bacteria 3004195979 3004198264 320
108 iso_pu_bacteria 3004239961 3004246371 320
109 iso_pu_bacteria 649633066 649870240 320
110 iso_pu_bacteria 8004300914 8004305236 320
111 iso_pu_bacteria 8004361976 8004364867 320
112 iso_pu_bacteria 8004695233 8004703159 320
113 3300002741 JGI25157J39369_1001146 JGI25157J39369_10011462 322
114 3300010375 Ga0105239_10243569 Ga0105239_102435692 322
115 3300013307 Ga0157372_10491880 Ga0157372_104918802 322
116 3300025250 Ga0209026_1000050 Ga0209026_1000050150 322
117 3300025256 Ga0209759_1000233 Ga0209759_100023321 322
118 3300026078 Ga0207702_10103697 Ga0207702_101036972 322
119 3300037418 Ga0395900_0169948 Ga0395900_0169948_726_1694 322
120 3300037471 Ga0395905_0055169 Ga0395905_0055169_307_1275 322
121 3300048905 Ga0496102_0228110 Ga0496102_0228110_761_1735 322
122 iso_pu_bacteria 2509276022 2509393263 322
123 iso_pu_bacteria 2513237164 2514037890 322
124 iso_pu_bacteria 2791355123 2792746862 322
125 iso_pu_bacteria 2874168670 2874172087 322
126 iso_pu_bacteria 2885312484 2885314446 322
127 iso_pu_bacteria 2510065059 2510314700 323
128 iso_pu_bacteria 2512875024 2512962473 323
129 iso_pu_bacteria 2844002411 2844003795 323
130 iso_pu_bacteria 2844009547 2844010475 323
131 iso_pu_bacteria 2856320880 2856320916 323
132 iso_pu_bacteria 2869169390 2869171896 323
133 iso_pu_bacteria 2869234852 2869237305 323
134 iso_pu_bacteria 2869242130 2869245015 323
135 iso_pu_bacteria 2869256925 2869260716 323
136 iso_pu_bacteria 2869278585 2869280162 323
137 iso_pu_bacteria 2871435913 2871436512 323
138 iso_pu_bacteria 2871451962 2871458739 323
139 iso_pu_bacteria 2871466892 2871467299 323
140 iso_pu_bacteria 2871481445 2871486102 323
141 iso_pu_bacteria 2874109183 2874113388 323
142 iso_pu_bacteria 2874116593 2874122180 323
143 iso_pu_bacteria 2874139085 2874143286 323
144 iso_pu_bacteria 2876386047 2876392330 323
145 iso_pu_bacteria 2876420981 2876424479 323
146 iso_pu_bacteria 2878730984 2878735034 323
147 iso_pu_bacteria 2878738818 2878740648 323
148 iso_pu_bacteria 2888337043 2888343018 323
149 iso_pu_bacteria 2903513507 2903517863 323
150 iso_pu_bacteria 2906378014 2906385038 323
151 iso_pu_bacteria 2906401398 2906404342 323
152 iso_pu_bacteria 2906427513 2906435355 323
153 iso_pu_bacteria 2924710171 2924711996 323
154 iso_pu_bacteria 2924718760 2924721374 323
155 iso_pu_bacteria 2924741084 2924743833 323
156 iso_pu_bacteria 2924776078 2924778249 323
157 iso_pu_bacteria 2937861824 2937865178 323
158 iso_pu_bacteria 2937877337 2937878322 323
159 iso_pu_bacteria 2937972304 2937980234 323
160 iso_pu_bacteria 2958034702 2958036028 323
161 iso_pu_bacteria 2958041894 2958045334 323
162 iso_pu_bacteria 2958084443 2958085438 323
163 iso_pu_bacteria 2958144490 2958147827 323
164 iso_pu_bacteria 2961183825 2961190394 323
165 iso_pu_bacteria 2968016561 2968023270 323
166 iso_pu_bacteria 2968138860 2968142991 323
167 iso_pu_bacteria 2970469710 2970475854 323
168 iso_pu_bacteria 2970489779 2970490144 323
169 iso_pu_bacteria 2970510686 2970516803 323
170 iso_pu_bacteria 2970532167 2970536571 323
171 iso_pu_bacteria 2970593180 2970594759 323
172 iso_pu_bacteria 2970619444 2970623025 323
173 iso_pu_bacteria 2970627176 2970632794 323
174 iso_pu_bacteria 2977851361 2977857257 323
175 iso_pu_bacteria 2977898635 2977899724 323
176 iso_pu_bacteria 2979764755 2979765802 323
177 iso_pu_bacteria 2996348954 2996349922 323
178 iso_pu_bacteria 2996386984 2996387645 323
179 iso_pu_bacteria 3004232784 3004239028 323
180 iso_pu_bacteria 3004248173 3004248866 323
181 iso_pu_bacteria 3004268573 3004272531 323
182 iso_pu_bacteria 3004275668 3004276624 323
183 3300046460 Ga0495638_0027378 Ga0495638_0027378_571_1611 324
184 iso_pu_bacteria 2512875016 2512934171 324
185 iso_pu_bacteria 2874123672 2874131447 324
186 iso_pu_bacteria 2876363079 2876363568 324
187 iso_pu_bacteria 2903448605 2903454347 324
188 iso_pu_bacteria 2903521522 2903525518 324
189 iso_pu_bacteria 2903528002 2903531737 324
190 iso_pu_bacteria 2963644680 2963645028 324
191 iso_pu_bacteria 2968083720 2968088688 324
192 iso_pu_bacteria 637000159 637077323 324
193 3300001989 JGI24739J22299_10004046 JGI24739J22299_100040465 326
194 3300002067 JGI24735J21928_10042907 JGI24735J21928_100429071 326
195 3300005563 Ga0068855_100610739 Ga0068855_1006107391 326
196 3300025261 Ga0209233_1018698 Ga0209233_10186982 326
197 3300025904 Ga0207647_10022997 Ga0207647_100229972 326

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

3

313

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7e36-assembly1.cif.gz_A a [6+4]-cycloaddition adduct is the biosynthetic intermediate in streptoseomycin biosynthesis 0.8106 4 321
5tlc-assembly1.cif.gz_B crystal structure of bdsa from bacillus subtilis wu-s2b 0.8056 4 321
5tlc-assembly1.cif.gz_D crystal structure of bdsa from bacillus subtilis wu-s2b 0.8023 4 321
5tlc-assembly1.cif.gz_C crystal structure of bdsa from bacillus subtilis wu-s2b 0.8019 4 321
3b9n-assembly2.cif.gz_B crystal structure of long-chain alkane monooxygenase (lada) 0.7993 1 322
ID Description Score Start End Superfamily
5tlcB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8056 4 321 3.20.20.30
5tlcD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8023 4 321 3.20.20.30
6aslA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7926 1 324 3.20.20.30
6aslA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7861 1 324 3.20.20.30
3b9oB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.7858 4 322 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A7R6XLN6-F1-model_v4 Luciferase-like domain-containing protein 0.8717 5 298 GO:0004497
GO:0016705
AF-A0A1I5AS75-F1-model_v4 Luciferase-like monooxygenase 0.8578 2 326 GO:0004497
GO:0016705
AF-A0A1I5AS75-F1-model_v4 Luciferase-like monooxygenase 0.853 2 326 GO:0004497
GO:0016705
AF-A0A5R2N007-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.8355 2 121 GO:0016705
AF-A0A378SJ12-F1-model_v4 Fmnh2-utilizing oxygenase (EC 1.14.-.-) 0.8349 3 321 GO:0016705

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pLDDT pTM Quality
75.35 0.8 High
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Predicted Structure (AlphaFold2)

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