F300832

General Info

Members Datasets Scaffolds Average Seq Length
195 151 160 412

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3002998708|3003008825
Length 477
Sequence KPGSPQPGPTPSGPTPSDATPSDATPSDATPPGPTTPGPSENGSPPPGAAPSGRIPTGPILTARAKALLPLVIPALAVGIGSSLVLLALSAVAEWLQDVLWDHLPVAIGADGSSAWWTLVILMATGAAVGLVVWKVPGHGGPDPATEGLIAPPMAPRMLPSLFLVTGLALAGGVSLGPENPITAANIALAFAIGARLIPAISGEMWLAMAAAGTVGALFGTPVAAALILSEMPMGKSSLPLWDRLFAPLVAAAAGAITTSVIASPMIAFKMPAYRGVELIDLVSGSIIAVAACAIGLAAVYVFPHAYALFQRVQHVSNPFVMITLGGTLLGVLGMIGGQVTLFKGLDETKELLAAGYSGPHLFLIIIVKIAALLIAATCGFRGGRIFPAMFIGVAIGMFSVALVDSIPVSLAVVCGVLGVLVAITRQGWLSLFAALAIVGDTRLLPVACIAVLPAWLLATGHPEMLIEEKEPATTTA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
3 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
4 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
5 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
6 2643221575 Microbacterium sp. Root61 Isolate Unclassified
7 2643221578 Streptomyces sp. Root63 Isolate Unclassified
8 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
9 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
10 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
11 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
12 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
13 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
14 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
15 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
16 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
17 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
18 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
19 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
20 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
21 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
22 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
23 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
24 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
25 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
26 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
27 2919150387 Rahnella aceris 1817 Isolate Unclassified
28 2927143783 Rahnella sp. 2050 Isolate Unclassified
29 2928153084 Leifsonia sp. 563 Isolate Unclassified
30 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
31 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
32 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
33 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
34 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
35 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
36 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
37 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
38 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
39 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
40 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
41 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
42 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
43 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
44 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
45 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
46 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
47 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
48 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
63 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
67 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
74 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
79 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
85 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
86 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
87 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
88 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
89 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
92 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
97 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
98 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
101 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
102 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
105 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
108 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
111 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
116 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
117 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
118 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
119 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
120 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
136 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
147 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
150 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
151 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.03
Metatranscriptomes 1.03
Isolates 17.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.36
Nodule 1.03
Rhizoplane 6.15
Rhizosphere 62.05
Stem 0
Stem Tuber 0
Unclassified 16.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2276180 2162886007 Bacteria 6205
2 JGI25162J39368_1000002 3300002737 Bacteria 663004
3 JGI25163J39215_1000111 3300002771 Bacteria 34169
4 JGI25164J39214_1000006 3300002772 Bacteria 342675
5 Ga0006562J51391_1038488 3300003578 Bacteria 2530
6 Ga0006562J51391_1038491 3300003578 Bacteria 3980
7 Ga0055538_1000003 3300003751 Bacteria 663004
8 Ga0055539_1000003 3300003752 Bacteria 663004
9 Ga0055539_1000008 3300003752 Bacteria 537665
10 Ga0055539_1000058 3300003752 Bacteria 149354
11 Ga0055533_1000001 3300003756 Bacteria 1863437
12 Ga0055533_1000005 3300003756 Bacteria 663004
13 Ga0055525_1000005 3300003759 Bacteria 663004
14 Ga0055525_1000638 3300003759 Bacteria 14203
15 Ga0055541_1000003 3300003841 Bacteria 663004
16 Ga0058692_1001520 3300003856 Bacteria 8454
17 Ga0065704_10000315 3300005289 Bacteria 47286
18 Ga0079104_1001182 3300006946 Bacteria 18794
19 Ga0105251_10011337 3300009011 Bacteria 5098
20 Ga0105244_10000202 3300009036 Bacteria 60653
21 Ga0105244_10000431 3300009036 Bacteria 38781
22 Ga0105244_10002857 3300009036 Bacteria 12813
23 Ga0105244_10003569 3300009036 Bacteria 11053
24 Ga0105250_10000141 3300009092 Bacteria 62782
25 Ga0105250_10003437 3300009092 Bacteria 7504
26 Ga0105245_10059565 3300009098 Bacteria 3438
27 Ga0114129_10004075 3300009147 Bacteria 20643
28 Ga0157371_10000134 3300013102 Bacteria 108562
29 Ga0157370_10002105 3300013104 Bacteria 24320
30 Ga0163162_10065416 3300013306 Bacteria 3682
31 Ga0163162_10402079 3300013306 Bacteria 1502
32 Ga0209760_100062 3300025207 Bacteria 92359
33 Ga0209784_100001 3300025224 Bacteria 3600592
34 Ga0209566_100001 3300025225 Bacteria 3600765
35 Ga0209566_100026 3300025225 Bacteria 367457
36 Ga0209674_100001 3300025226 Bacteria 4013750
37 Ga0209674_100002 3300025226 Bacteria 3600592
38 Ga0209563_100001 3300025230 Bacteria 4013775
39 Ga0209563_100002 3300025230 Bacteria 2045675
40 Ga0209563_100529 3300025230 Bacteria 12905
41 Ga0207427_100009 3300025231 Bacteria 663036
42 Ga0209437_100001 3300025233 Bacteria 2045675
43 Ga0209677_100001 3300025253 Bacteria 4013787
44 Ga0209677_100002 3300025253 Bacteria 2045675
45 Ga0209233_1001748 3300025261 Bacteria 8378
46 Ga0207696_1000258 3300025711 Bacteria 68746
47 Ga0207696_1001485 3300025711 Bacteria 12662
48 Ga0207655_1000262 3300025728 Bacteria 83031
49 Ga0207655_1000349 3300025728 Bacteria 66933
50 Ga0207655_1000358 3300025728 Bacteria 64902
51 Ga0207655_1014500 3300025728 Bacteria 4449
52 Ga0207713_1029555 3300025735 Bacteria 2452
53 Ga0209281_1000095 3300027111 Bacteria 238108
54 Ga0209371_1000001 3300027312 Bacteria 2771503
55 Ga0268266_10320892 3300028379 Bacteria 1450
56 Ga0307515_10063831 3300028794 Bacteria 5162
57 Ga0268256_1000001 3300030500 Bacteria 2771065
58 Ga0307510_10128329 3300033180 Bacteria 2218
59 Ga0373925_0163714 3300037068 Bacteria 1753
60 Ga0466972_0037208 3300044658 Bacteria 2379
61 Ga0466972_0080969 3300044658 Bacteria 1546
62 Ga0466966_0055130 3300044684 Bacteria 2517
63 Ga0466970_0077371 3300044765 Bacteria 1793
64 Ga0466960_0070949 3300044901 Bacteria 1734
65 Ga0466959_0013330 3300045049 Bacteria 5957
66 Ga0495592_0009661 3300046454 Bacteria 7260
67 Ga0495603_0006454 3300046455 Bacteria 7024
68 Ga0495603_0009374 3300046455 Bacteria 5915
69 Ga0495603_0016660 3300046455 Bacteria 4446
70 Ga0495603_0026179 3300046455 Bacteria 3525
71 Ga0495629_0017556 3300046459 Bacteria 5129
72 Ga0495629_0025955 3300046459 Bacteria 4163
73 Ga0495629_0136186 3300046459 Bacteria 1710
74 Ga0495638_0072908 3300046460 Bacteria 2097
75 Ga0495641_0017253 3300046461 Bacteria 3767
76 Ga0495651_0002264 3300046462 Bacteria 14858
77 Ga0495651_0035292 3300046462 Bacteria 3895
78 Ga0495650_0000404 3300046471 Bacteria 71360
79 Ga0495605_0003483 3300046474 Bacteria 9363
80 Ga0495585_0053296 3300046492 Bacteria 2239
81 Ga0495594_0008868 3300046499 Bacteria 5186
82 Ga0495594_0036920 3300046499 Bacteria 2666
83 Ga0495583_0014553 3300046506 Bacteria 4334
84 Ga0495606_0025741 3300046507 Bacteria 4205
85 Ga0495608_0063420 3300046511 Bacteria 2425
86 Ga0495610_0048047 3300046512 Bacteria 2096
87 Ga0495616_0083170 3300046513 Bacteria 1527
88 Ga0495620_0010806 3300046515 Bacteria 4800
89 Ga0495628_0029081 3300046516 Bacteria 4485
90 Ga0495630_0134914 3300046517 Bacteria 1876
91 Ga0495631_0013869 3300046518 Bacteria 3900
92 Ga0495631_0027758 3300046518 Bacteria 2587
93 Ga0495666_0018415 3300046526 Bacteria 3475
94 Ga0495642_0005749 3300046528 Bacteria 4758
95 Ga0495640_0039853 3300046533 Bacteria 3293
96 Ga0495609_0020060 3300046538 Bacteria 3089
97 Ga0495597_0000112 3300046542 Bacteria 72402
98 Ga0495597_0012142 3300046542 Bacteria 4163
99 Ga0495645_0038084 3300046543 Bacteria 3507
100 Ga0495667_0089996 3300046559 Bacteria 1989
101 Ga0495611_0010242 3300046648 Bacteria 3967
102 Ga0495657_0005584 3300046675 Bacteria 9923
103 Ga0495657_0036328 3300046675 Bacteria 3405
104 Ga0495657_0044259 3300046675 Bacteria 3029
105 Ga0495657_0072064 3300046675 Bacteria 2254
106 Ga0495613_0062518 3300046689 Bacteria 2724
107 Ga0495649_0026771 3300046694 Bacteria 3203
108 Ga0495589_0010629 3300046794 Bacteria 4786
109 Ga0495589_0015730 3300046794 Bacteria 3889
110 Ga0495589_0022747 3300046794 Bacteria 3197
111 Ga0495600_0048218 3300046809 Bacteria 2779
112 Ga0495660_0000004 3300046810 Bacteria 1003183
113 Ga0495581_0074924 3300047315 Bacteria 1958
114 Ga0495604_0020182 3300047317 Bacteria 5325
115 Ga0495636_0000569 3300047318 Bacteria 13591
116 Ga0495676_0007823 3300047321 Bacteria 9807
117 Ga0495676_0036863 3300047321 Bacteria 4077
118 Ga0495680_0009376 3300047322 Bacteria 8806
119 Ga0495687_002593 3300047443 Bacteria 14229
120 Ga0495687_021069 3300047443 Bacteria 3164
121 Ga0495675_0007142 3300047444 Bacteria 6875
122 Ga0495685_002311 3300047447 Bacteria 5948
123 Ga0495685_012454 3300047447 Bacteria 2882
124 Ga0495681_0012961 3300047470 Bacteria 4868
125 Ga0495686_0015503 3300047472 Bacteria 5199
126 Ga0495593_0013456 3300047673 Bacteria 4666
127 Ga0495614_0017863 3300048089 Bacteria 3076
128 Ga0496104_0002176 3300048907 Bacteria 17002
129 Ga0496105_0245732 3300048908 Bacteria 1451
130 Ga0496108_0013998 3300048911 Bacteria 6545
131 Ga0496109_0027642 3300048912 Bacteria 5068
132 Ga0496109_0084524 3300048912 Bacteria 2928
133 Ga0496112_0015648 3300048915 Bacteria 7084
134 Ga0496114_0123753 3300048917 Bacteria 2227
135 Ga0496114_0181608 3300048917 Bacteria 1838
136 Ga0496115_0022778 3300048918 Bacteria 4856
137 Ga0496115_0121691 3300048918 Bacteria 2148
138 Ga0496116_0000074 3300048919 Bacteria 231767
139 Ga0496117_0020936 3300048920 Bacteria 5316
140 Ga0496117_0049188 3300048920 Bacteria 3002
141 Ga0496118_0009961 3300048921 Bacteria 9488
142 Ga0496118_0020522 3300048921 Bacteria 5854
143 Ga0496120_0001973 3300048923 Bacteria 22370
144 Ga0496122_0000064 3300048925 Bacteria 239959
145 Ga0496122_0062490 3300048925 Bacteria 2726
146 Ga0496123_0000049 3300048926 Bacteria 239949
147 Ga0496123_0005717 3300048926 Bacteria 12389
148 Ga0496124_0000027 3300048927 Bacteria 376097
149 Ga0496125_0000052 3300048928 Bacteria 281862
150 Ga0496126_0003065 3300048929 Bacteria 21641
151 Ga0501034_0014280 3300049571 Bacteria 8184
152 Ga0501038_0013165 3300049574 Bacteria 7544
153 Ga0501083_0004208 3300049744 Bacteria 10132
154 Ga0501035_0100136 3300049822 Bacteria 2544
155 Ga0501044_0036482 3300049823 Bacteria 5144
156 nmdc:mga05p37_4072_c1 3300050507 Bacteria 17081
157 Ga0495619_0024342 3300053085 Bacteria 3883
158 Ga0500573_0071618 3300053140 Bacteria 1976
159 Ga0500645_004037 3300053730 Bacteria 5760
160 Ga0501082_0071226 3300060353 Bacteria 2993

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044765 Ga0466970_0077371 Ga0466970_0077371_171_1478 348
2 3300044901 Ga0466960_0070949 Ga0466960_0070949_294_1601 348
3 3300047447 Ga0495685_012454 Ga0495685_012454_1793_2869 348
4 3300044658 Ga0466972_0080969 Ga0466972_0080969_58_1401 354
5 3300044658 Ga0466972_0037208 Ga0466972_0037208_510_1817 356
6 3300044684 Ga0466966_0055130 Ga0466966_0055130_501_1808 356
7 3300045049 Ga0466959_0013330 Ga0466959_0013330_1038_2345 356
8 3300053140 Ga0500573_0071618 Ga0500573_0071618_501_1817 372
9 3300003752 Ga0055539_1000008 Ga0055539_1000008507 374
10 3300003752 Ga0055539_1000058 Ga0055539_100005819 374
11 3300003756 Ga0055533_1000001 Ga0055533_1000001562 374
12 3300003759 Ga0055525_1000638 Ga0055525_10006387 374
13 3300025225 Ga0209566_100026 Ga0209566_100026161 374
14 3300025226 Ga0209674_100001 Ga0209674_100001563 374
15 3300025230 Ga0209563_100001 Ga0209563_100001563 374
16 3300025253 Ga0209677_100001 Ga0209677_100001563 374
17 3300037068 Ga0373925_0163714 Ga0373925_0163714_84_1394 374
18 3300046459 Ga0495629_0136186 Ga0495629_0136186_210_1517 374
19 3300053085 Ga0495619_0024342 Ga0495619_0024342_2068_3378 374
20 3300046648 Ga0495611_0010242 Ga0495611_0010242_1568_2815 378
21 3300048908 Ga0496105_0245732 Ga0496105_0245732_14_1324 378
22 3300048911 Ga0496108_0013998 Ga0496108_0013998_5160_6470 378
23 3300048925 Ga0496122_0062490 Ga0496122_0062490_949_2187 378
24 3300048926 Ga0496123_0005717 Ga0496123_0005717_3491_4729 378
25 3300003856 Ga0058692_1001520 Ga0058692_10015205 379
26 3300027312 Ga0209371_1000001 Ga0209371_10000012442 379
27 3300030500 Ga0268256_1000001 Ga0268256_1000001198 379
28 3300025230 Ga0209563_100529 Ga0209563_1005292 380
29 3300048918 Ga0496115_0022778 Ga0496115_0022778_1634_2947 385
30 3300003578 Ga0006562J51391_1038488 Ga0006562J51391_10384882 386
31 3300003578 Ga0006562J51391_1038491 Ga0006562J51391_10384912 386
32 3300013306 Ga0163162_10402079 Ga0163162_104020791 386
33 3300046499 Ga0495594_0008868 Ga0495594_0008868_1720_2883 386
34 3300046794 Ga0495589_0022747 Ga0495589_0022747_758_1921 386
35 3300047315 Ga0495581_0074924 Ga0495581_0074924_165_1328 386
36 3300047318 Ga0495636_0000569 Ga0495636_0000569_4639_5802 386
37 3300048917 Ga0496114_0123753 Ga0496114_0123753_931_2205 386
38 3300048918 Ga0496115_0121691 Ga0496115_0121691_404_1657 386
39 3300046455 Ga0495603_0026179 Ga0495603_0026179_1749_3056 387
40 3300046499 Ga0495594_0036920 Ga0495594_0036920_252_1559 387
41 3300047321 Ga0495676_0036863 Ga0495676_0036863_1622_2929 387
42 3300049822 Ga0501035_0100136 Ga0501035_0100136_893_2176 391
43 3300048912 Ga0496109_0027642 Ga0496109_0027642_70_1362 393
44 3300048915 Ga0496112_0015648 Ga0496112_0015648_4815_6107 393
45 3300048917 Ga0496114_0181608 Ga0496114_0181608_185_1477 393
46 3300046794 Ga0495589_0015730 Ga0495589_0015730_164_1471 395
47 3300009147 Ga0114129_10004075 Ga0114129_100040756 397
48 3300050507 nmdc:mga05p37_4072_c1 nmdc:mga05p37_4072_c1_14435_15754 397
49 3300046460 Ga0495638_0072908 Ga0495638_0072908_373_1680 398
50 3300046492 Ga0495585_0053296 Ga0495585_0053296_273_1580 398
51 3300046518 Ga0495631_0027758 Ga0495631_0027758_465_1772 398
52 3300046794 Ga0495589_0010629 Ga0495589_0010629_1817_3124 398
53 3300047443 Ga0495687_002593 Ga0495687_002593_6858_8144 398
54 3300047447 Ga0495685_002311 Ga0495685_002311_2684_3970 398
55 3300046454 Ga0495592_0009661 Ga0495592_0009661_436_1638 399
56 3300046462 Ga0495651_0035292 Ga0495651_0035292_504_1706 399
57 3300046511 Ga0495608_0063420 Ga0495608_0063420_565_1767 399
58 3300046513 Ga0495616_0083170 Ga0495616_0083170_11_1213 399
59 3300046675 Ga0495657_0005584 Ga0495657_0005584_7082_8284 399
60 3300046675 Ga0495657_0036328 Ga0495657_0036328_227_1429 399
61 3300047322 Ga0495680_0009376 Ga0495680_0009376_6331_7533 399
62 3300053730 Ga0500645_004037 Ga0500645_004037_1582_2919 400
63 3300006946 Ga0079104_1001182 Ga0079104_100118216 402
64 3300009036 Ga0105244_10003569 Ga0105244_100035698 402
65 3300009092 Ga0105250_10003437 Ga0105250_100034374 402
66 3300025711 Ga0207696_1001485 Ga0207696_100148512 402
67 3300025728 Ga0207655_1014500 Ga0207655_10145004 402
68 3300027111 Ga0209281_1000095 Ga0209281_100009540 402
69 3300046542 Ga0495597_0000112 Ga0495597_0000112_66862_68070 402
70 3300047470 Ga0495681_0012961 Ga0495681_0012961_754_1962 402
71 3300049574 Ga0501038_0013165 Ga0501038_0013165_1918_3408 402
72 3300049744 Ga0501083_0004208 Ga0501083_0004208_6517_8097 402
73 3300049823 Ga0501044_0036482 Ga0501044_0036482_289_1869 402
74 iso_pu_bacteria 2643221575 2643887032 402
75 iso_pu_bacteria 2671180115 2671584435 402
76 iso_pu_bacteria 8046352972 8046354965 402
77 iso_pu_bacteria 8054849141 8054852060 402
78 3300013104 Ga0157370_10002105 Ga0157370_1000210523 403
79 iso_pu_bacteria 2791354903 2791922360 403
80 3300033180 Ga0307510_10128329 Ga0307510_101283292 404
81 3300046455 Ga0495603_0016660 Ga0495603_0016660_2092_3309 404
82 3300046459 Ga0495629_0025955 Ga0495629_0025955_1932_3149 404
83 3300046461 Ga0495641_0017253 Ga0495641_0017253_1991_3208 404
84 3300046474 Ga0495605_0003483 Ga0495605_0003483_4120_5337 404
85 3300046507 Ga0495606_0025741 Ga0495606_0025741_1471_2688 404
86 3300046512 Ga0495610_0048047 Ga0495610_0048047_246_1463 404
87 3300046516 Ga0495628_0029081 Ga0495628_0029081_1871_3088 404
88 3300046517 Ga0495630_0134914 Ga0495630_0134914_10_1227 404
89 3300046518 Ga0495631_0013869 Ga0495631_0013869_300_1517 404
90 3300046533 Ga0495640_0039853 Ga0495640_0039853_203_1420 404
91 3300046538 Ga0495609_0020060 Ga0495609_0020060_1235_2452 404
92 3300046675 Ga0495657_0044259 Ga0495657_0044259_1163_2380 404
93 3300046675 Ga0495657_0072064 Ga0495657_0072064_443_1660 404
94 3300046689 Ga0495613_0062518 Ga0495613_0062518_694_1911 404
95 3300047317 Ga0495604_0020182 Ga0495604_0020182_3943_5160 404
96 3300047443 Ga0495687_021069 Ga0495687_021069_542_1759 404
97 3300047472 Ga0495686_0015503 Ga0495686_0015503_32_1249 404
98 3300047673 Ga0495593_0013456 Ga0495593_0013456_1803_3020 404
99 3300048089 Ga0495614_0017863 Ga0495614_0017863_1012_2229 404
100 iso_pu_bacteria 2775506925 2776370662 404
101 iso_pu_bacteria 2863067949 2863072213 404
102 iso_pu_bacteria 2875391855 2875394690 405
103 3300049571 Ga0501034_0014280 Ga0501034_0014280_1527_3101 406
104 iso_pu_bacteria 2947224130 2947228124 406
105 3300009011 Ga0105251_10011337 Ga0105251_100113374 407
106 3300009036 Ga0105244_10002857 Ga0105244_1000285713 407
107 3300009098 Ga0105245_10059565 Ga0105245_100595652 407
108 3300025728 Ga0207655_1000262 Ga0207655_100026219 407
109 3300025735 Ga0207713_1029555 Ga0207713_10295552 407
110 3300028379 Ga0268266_10320892 Ga0268266_103208921 407
111 3300046455 Ga0495603_0006454 Ga0495603_0006454_1293_2579 407
112 3300046455 Ga0495603_0009374 Ga0495603_0009374_4621_5898 407
113 3300046459 Ga0495629_0017556 Ga0495629_0017556_389_1675 407
114 3300046506 Ga0495583_0014553 Ga0495583_0014553_907_2133 407
115 3300046515 Ga0495620_0010806 Ga0495620_0010806_546_1772 407
116 3300046526 Ga0495666_0018415 Ga0495666_0018415_962_2233 407
117 3300046528 Ga0495642_0005749 Ga0495642_0005749_2813_4039 407
118 3300046542 Ga0495597_0012142 Ga0495597_0012142_762_1988 407
119 3300046559 Ga0495667_0089996 Ga0495667_0089996_336_1562 407
120 3300046694 Ga0495649_0026771 Ga0495649_0026771_546_1772 407
121 3300046809 Ga0495600_0048218 Ga0495600_0048218_584_1810 407
122 3300047321 Ga0495676_0007823 Ga0495676_0007823_6885_8162 407
123 3300047444 Ga0495675_0007142 Ga0495675_0007142_4705_5931 407
124 3300048912 Ga0496109_0084524 Ga0496109_0084524_294_1580 407
125 iso_pu_bacteria 2616644814 2616701493 407
126 iso_pu_bacteria 2616644941 2616903635 407
127 iso_pu_bacteria 2643221578 2643899719 407
128 iso_pu_bacteria 2643221673 2644403687 407
129 iso_pu_bacteria 2912757875 2912761851 407
130 iso_pu_bacteria 2946045630 2946049946 407
131 iso_pu_bacteria 3002998708 3003008825 407
132 iso_pu_bacteria 8025530807 8025538156 407
133 iso_pu_bacteria 2643221601 2644017629 408
134 iso_pu_bacteria 2643221631 2644173411 408
135 3300028794 Ga0307515_10063831 Ga0307515_100638316 409
136 iso_pu_bacteria 2643221694 2644523899 409
137 iso_pu_bacteria 2643221722 2644667996 409
138 iso_pu_bacteria 2861520306 2861527678 409
139 iso_pu_bacteria 2919055335 2919057878 410
140 iso_pu_bacteria 2928153084 2928156113 410
141 iso_pu_bacteria 2643221690 2644504634 411
142 2162886007 SwRhRL2b_contig_2276180 SwRhRL2b_0977.00001700 412
143 3300002737 JGI25162J39368_1000002 JGI25162J39368_1000002265 412
144 3300002771 JGI25163J39215_1000111 JGI25163J39215_100011116 412
145 3300002772 JGI25164J39214_1000006 JGI25164J39214_1000006151 412
146 3300003751 Ga0055538_1000003 Ga0055538_1000003265 412
147 3300003752 Ga0055539_1000003 Ga0055539_1000003352 412
148 3300003756 Ga0055533_1000005 Ga0055533_1000005352 412
149 3300003759 Ga0055525_1000005 Ga0055525_1000005265 412
150 3300003841 Ga0055541_1000003 Ga0055541_1000003265 412
151 3300005289 Ga0065704_10000315 Ga0065704_100003152 412
152 3300009036 Ga0105244_10000202 Ga0105244_1000020216 412
153 3300009036 Ga0105244_10000431 Ga0105244_1000043118 412
154 3300009092 Ga0105250_10000141 Ga0105250_1000014153 412
155 3300013102 Ga0157371_10000134 Ga0157371_1000013472 412
156 3300013306 Ga0163162_10065416 Ga0163162_100654162 412
157 3300025207 Ga0209760_100062 Ga0209760_10006227 412
158 3300025224 Ga0209784_100001 Ga0209784_1000013109 412
159 3300025225 Ga0209566_100001 Ga0209566_1000013109 412
160 3300025226 Ga0209674_100002 Ga0209674_1000023109 412
161 3300025230 Ga0209563_100002 Ga0209563_1000021644 412
162 3300025231 Ga0207427_100009 Ga0207427_100009264 412
163 3300025233 Ga0209437_100001 Ga0209437_1000011644 412
164 3300025253 Ga0209677_100002 Ga0209677_1000021644 412
165 3300025261 Ga0209233_1001748 Ga0209233_10017486 412
166 3300025711 Ga0207696_1000258 Ga0207696_100025818 412
167 3300025728 Ga0207655_1000349 Ga0207655_100034919 412
168 3300025728 Ga0207655_1000358 Ga0207655_100035843 412
169 3300046462 Ga0495651_0002264 Ga0495651_0002264_11367_12689 412
170 3300046471 Ga0495650_0000404 Ga0495650_0000404_61356_62594 412
171 3300046543 Ga0495645_0038084 Ga0495645_0038084_838_2160 412
172 3300046810 Ga0495660_0000004 Ga0495660_0000004_174723_175961 412
173 3300048907 Ga0496104_0002176 Ga0496104_0002176_3549_4787 412
174 3300048919 Ga0496116_0000074 Ga0496116_0000074_54460_55698 412
175 3300048920 Ga0496117_0020936 Ga0496117_0020936_1307_2545 412
176 3300048920 Ga0496117_0049188 Ga0496117_0049188_1418_2680 412
177 3300048921 Ga0496118_0009961 Ga0496118_0009961_255_1517 412
178 3300048921 Ga0496118_0020522 Ga0496118_0020522_1307_2545 412
179 3300048923 Ga0496120_0001973 Ga0496120_0001973_2450_3688 412
180 3300048925 Ga0496122_0000064 Ga0496122_0000064_64985_66223 412
181 3300048926 Ga0496123_0000049 Ga0496123_0000049_173727_174965 412
182 3300048927 Ga0496124_0000027 Ga0496124_0000027_166267_167505 412
183 3300048928 Ga0496125_0000052 Ga0496125_0000052_77879_79117 412
184 3300048929 Ga0496126_0003065 Ga0496126_0003065_12595_13833 412
185 3300060353 Ga0501082_0071226 Ga0501082_0071226_147_1727 412
186 iso_pu_bacteria 2585427591 2585827415 412
187 iso_pu_bacteria 2585427592 2585833296 412
188 iso_pu_bacteria 2667528173 2671107229 412
189 iso_pu_bacteria 2818991472 2819739536 412
190 iso_pu_bacteria 2870628048 2870628813 412
191 iso_pu_bacteria 2884994152 2884997181 412
192 iso_pu_bacteria 2904474040 2904476167 412
193 iso_pu_bacteria 2919150387 2919152336 412
194 iso_pu_bacteria 2927143783 2927145005 412
195 iso_pu_bacteria 2946003308 2946004271 412

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00654

Voltage_CLC

Voltage gated chloride channel

125

460

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6v2j-assembly1.cif.gz_A-2 crystal structure of clc-ec1 triple mutant (e113q, e148q, e203q) 0.8443 2 397
2r9h-assembly1.cif.gz_B crystal structure of q207c mutant of clc-ec1 in complex with fab 0.8366 1 397
2fec-assembly1.cif.gz_B structure of the e203q mutant of the cl-/h+ exchanger clc-ec1 from e.coli 0.8331 1 397
3ejz-assembly1.cif.gz_A structure of e203v mutant e.coli cl-/h+ exchanger, clc-ec1 0.8306 1 397
7cvt-assembly1.cif.gz_B crystal structure of the c85a/l194a/h234c mutant clc-ec1 with fab fragment 0.8292 1 397
ID Description Score Start End Superfamily
af_P67729_6_404_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9956 2 396 1.10.3080.10
af_P67729_6_404_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9807 2 396 1.10.3080.10
af_I1M627_86_531_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8447 4 392 1.10.3080.10
af_P96820_37_483_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8253 4 402 1.10.3080.10
af_H2L0J1_133_617_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8179 2 397 1.10.3080.10
ID Description Score Start End GO Terms
AF-A0A7X9EMA3-F1-model_v4 deleted 0.9876 2 205
AF-A0A379VN65-F1-model_v4 Putative ion-transport protein YfeO 0.9871 36 401 GO:0005247
GO:0005886
AF-A0A2W6PCY5-F1-model_v4 Ion channel protein 0.9862 2 302 GO:0005247
GO:0005886
AF-A0A4Y3RU83-F1-model_v4 Putative ion-transport protein 0.9829 2 399 GO:0005247
GO:0005886
AF-G5SES3-F1-model_v4 Ion channel protein 0.9812 2 221 GO:0005247
GO:0005886

Feature Viewer

pLDDT pTM Quality
87.99 0.88 High
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Predicted Structure (AlphaFold2)

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