F298446

General Info

Members Datasets Scaffolds Average Seq Length
194 133 388 864

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10011723|Ga0070717_100117233
Length 920
Sequence LAANLAPSAAVTRSIQDRYGLPPDREAFVQLEPASGRVIVIAPTRAACETIELALGLHIETFLERQHGAKVREMARSGRGFGIIAGTGTGKTLAIRPIAEEILRTTELKVGVVNREREATPETPSWNVIIVTTGIARRWFEDGDILTTDTLVVDEIHQTSAELELCLALGKRVGCRFIWLSATVDPTFYRRYLNSADVLEVVDFDAGKAATVRVVDKEPLEFLDDKFLQQVVRQRRGIAMFVPTRRGVESAAEHVEMNAPRVNTAYYHGGEPIRIIRPFLEGGEQKPFFLAMTAAGQSALNVRGLDTVVIDDVRFYNEVDRGRNVLTQEHLGANEILQMAGRVHGRVEGGRVFILSDRDIDFGRLRPTAPEFQLGGDSERVAITCAALGVRADELELPVPLDKIAYRKALALLERRGIVEKGRLTAYGRKVEAMPVERPWAELLVMGDDALLPFLAVMSAIESLHRMTREERDLNGVIVPGSDHLTAYNLYAEAYASAGYLGEVYGLPRQLFDEREVDEWATGRGVLVKAIEDAALGMASVYRAIGMPLPSTMTNAGDTELRRLQELLAEYMPFELVIDEETSNGDEARVSKTSVCGSWGAIAGEIRYFADKLGIPRASIEGTQVPMDLIRRHAHAGEPELVFEAERKRAPLILRRRVEYFGFDLGSEIEAIDSFPHELRDQARRLLAQALARGEARHAAVKRNQPLIDEVRETWRRSGGKTPKLGVSELSVMYESRLKDLDAMSNFKHANLDLTDELESLVPERVRAEYARLPDRVQVRDRDVEIQYDVEEGETGTLGVARLRLPEKLARTMSEAELPALDRPLRFVVTRGARGAARASTLDALQEELDRPFTEEELQAMNRAWEERRAARSGEDSTTRPPNDSVEQEGRRGPRTPYVEGERESPRRGGLRRRRGPRWG

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
66 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
67 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
75 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
79 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
99 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
100 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
115 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
133 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.52
Rhizosphere 98.45
Stem 0
Stem Tuber 0
Unclassified 1.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10011723 3300006028 Bacteria 6670
2 Ga0070658_10000511 3300005327 Bacteria 33660
3 Ga0070658_10006717 3300005327 Bacteria 9319
4 Ga0070658_10017092 3300005327 Bacteria 5805
5 Ga0070676_10018065 3300005328 Bacteria 3905
6 Ga0070683_100002601 3300005329 Bacteria 14429
7 Ga0070683_100014702 3300005329 Bacteria 6857
8 Ga0070683_100015924 3300005329 Bacteria 6615
9 Ga0070683_100034421 3300005329 Bacteria 4628
10 Ga0070680_100000356 3300005336 Bacteria 30761
11 Ga0070680_100002464 3300005336 Bacteria 13711
12 Ga0070680_100002688 3300005336 Bacteria 13181
13 Ga0070660_100002319 3300005339 Bacteria 13087
14 Ga0070689_100005981 3300005340 Bacteria 8375
15 Ga0070668_100003504 3300005347 Bacteria 11568
16 Ga0070671_100003013 3300005355 Bacteria 13115
17 Ga0070673_100016255 3300005364 Bacteria 5256
18 Ga0070688_100006325 3300005365 Bacteria 6324
19 Ga0070659_100013882 3300005366 Bacteria 6009
20 Ga0070709_10002132 3300005434 Bacteria 10707
21 Ga0070709_10003323 3300005434 Bacteria 8653
22 Ga0070714_100004190 3300005435 Bacteria 10858
23 Ga0070714_100004320 3300005435 Bacteria 10712
24 Ga0070713_100006924 3300005436 Bacteria 7912
25 Ga0070711_100000155 3300005439 Bacteria 36784
26 Ga0070711_100001205 3300005439 Bacteria 13976
27 Ga0070694_100021872 3300005444 Bacteria 4092
28 Ga0070708_100000022 3300005445 Bacteria 113297
29 Ga0070708_100000473 3300005445 Bacteria 30359
30 Ga0070681_10001408 3300005458 Bacteria 21107
31 Ga0068867_100033216 3300005459 Bacteria 3735
32 Ga0070707_100022084 3300005468 Bacteria 6016
33 Ga0070698_100012927 3300005471 Bacteria 8837
34 Ga0070698_100090464 3300005471 Bacteria 3044
35 Ga0070679_100000085 3300005530 Bacteria 70740
36 Ga0070679_100002972 3300005530 Bacteria 15467
37 Ga0070679_100021808 3300005530 Bacteria 6256
38 Ga0070684_100002564 3300005535 Bacteria 13418
39 Ga0070684_100011451 3300005535 Bacteria 7065
40 Ga0070697_100002514 3300005536 Bacteria 14107
41 Ga0070686_100038884 3300005544 Bacteria 2961
42 Ga0068855_100024708 3300005563 Bacteria 7187
43 Ga0068855_100076398 3300005563 Unclassified 3887
44 Ga0068856_100007088 3300005614 Bacteria 10946
45 Ga0068859_100002145 3300005617 Bacteria 20060
46 Ga0068858_100025089 3300005842 Bacteria 5547
47 Ga0081539_10000091 3300005985 Bacteria 211445
48 Ga0097621_100001246 3300006237 Bacteria 17602
49 Ga0075431_100008663 3300006847 Bacteria 10193
50 Ga0075434_100019830 3300006871 Bacteria 6510
51 Ga0097620_100002145 3300006931 Bacteria 20060
52 Ga0111539_10002788 3300009094 Bacteria 23195
53 Ga0105241_10006407 3300009174 Bacteria 8676
54 Ga0105248_10006676 3300009177 Bacteria 12665
55 Ga0105248_10021774 3300009177 Bacteria 7102
56 Ga0105239_10004607 3300010375 Bacteria 16416
57 Ga0157371_10020313 3300013102 Bacteria 4889
58 Ga0157371_10023051 3300013102 Bacteria 4552
59 Ga0157370_10013624 3300013104 Bacteria 8369
60 Ga0157370_10041473 3300013104 Bacteria 4440
61 Ga0157369_10003813 3300013105 Bacteria 17905
62 Ga0157372_10001350 3300013307 Bacteria 26529
63 Ga0157372_10002140 3300013307 Bacteria 21470
64 Ga0157372_10003048 3300013307 Bacteria 18057
65 Ga0157372_10028653 3300013307 Bacteria 6080
66 Ga0157372_10029650 3300013307 Bacteria 5977
67 Ga0157372_10058271 3300013307 Bacteria 4317
68 Ga0157375_10020079 3300013308 Bacteria 6097
69 Ga0157377_10001708 3300014745 Bacteria 9588
70 Ga0157376_10003170 3300014969 Bacteria 11296
71 Ga0213875_10000072 3300021388 Bacteria 119255
72 Ga0207682_10009584 3300025893 Bacteria 3818
73 Ga0207643_10002137 3300025908 Bacteria 10867
74 Ga0207705_10002652 3300025909 Bacteria 13704
75 Ga0207705_10005630 3300025909 Bacteria 9357
76 Ga0207695_10005205 3300025913 Bacteria 17402
77 Ga0207663_10000428 3300025916 Bacteria 18277
78 Ga0207663_10020062 3300025916 Bacteria 3780
79 Ga0207660_10000558 3300025917 Bacteria 25039
80 Ga0207660_10006498 3300025917 Bacteria 7586
81 Ga0207660_10015991 3300025917 Bacteria 4960
82 Ga0207657_10000648 3300025919 Bacteria 37063
83 Ga0207652_10000799 3300025921 Bacteria 30055
84 Ga0207652_10005164 3300025921 Bacteria 10597
85 Ga0207652_10010848 3300025921 Bacteria 7343
86 Ga0207659_10005934 3300025926 Bacteria 7455
87 Ga0207700_10022224 3300025928 Unclassified 4348
88 Ga0207700_10025952 3300025928 Bacteria 4079
89 Ga0207664_10001448 3300025929 Bacteria 15585
90 Ga0207664_10041364 3300025929 Bacteria 3590
91 Ga0207661_10000242 3300025944 Bacteria 35489
92 Ga0207661_10004050 3300025944 Bacteria 10239
93 Ga0207661_10005791 3300025944 Bacteria 8714
94 Ga0207661_10011172 3300025944 Bacteria 6495
95 Ga0207661_10055446 3300025944 Bacteria 3179
96 Ga0207679_10011815 3300025945 Bacteria 5673
97 Ga0207651_10021267 3300025960 Bacteria 3939
98 Ga0207648_10005926 3300026089 Bacteria 12224
99 Ga0207674_10000387 3300026116 Bacteria 57349
100 Ga0207674_10006944 3300026116 Bacteria 13260
101 Ga0207674_10008116 3300026116 Bacteria 12169
102 Ga0207698_10026037 3300026142 Bacteria 4132
103 Ga0316575_10006851 3300031665 Bacteria 4119
104 Ga0316579_10013774 3300031691 Bacteria 3485
105 Ga0307405_10012288 3300031731 Bacteria 4525
106 Ga0307405_10014452 3300031731 Bacteria 4245
107 Ga0307413_10012635 3300031824 Bacteria 4209
108 Ga0307413_10025112 3300031824 Unclassified 3260
109 Ga0307413_10038081 3300031824 Bacteria 2784
110 Ga0307407_10013569 3300031903 Bacteria 3960
111 Ga0307412_10035027 3300031911 Bacteria 3204
112 Ga0307409_100012492 3300031995 Bacteria 5414
113 Ga0307409_100047248 3300031995 Bacteria 3265
114 Ga0307416_100023687 3300032002 Bacteria 4461
115 Ga0307415_100015721 3300032126 Bacteria 4491
116 Ga0373934_0000408 3300035086 Bacteria 15068
117 Ga0373934_0001745 3300035086 Bacteria 7993
118 Ga0373923_0000248 3300035111 Bacteria 11582
119 Ga0373957_0002004 3300035120 Bacteria 5692
120 Ga0373957_0005269 3300035120 Bacteria 4002
121 Ga0373943_0001362 3300035170 Bacteria 11014
122 Ga0373943_0006126 3300035170 Bacteria 5405
123 Ga0373946_0010561 3300035171 Bacteria 3420
124 Ga0373955_0002177 3300035172 Bacteria 8485
125 Ga0373927_0003058 3300035695 Bacteria 12130
126 Ga0373927_0009832 3300035695 Bacteria 6411
127 Ga0373933_0000183 3300035724 Bacteria 41364
128 Ga0373933_0005572 3300035724 Bacteria 6861
129 Ga0373947_0000262 3300035725 Bacteria 29790
130 Ga0373937_0000101 3300036401 Bacteria 81054
131 Ga0373937_0000533 3300036401 Bacteria 34025
132 Ga0373925_0023815 3300037068 Bacteria 4466
133 Ga0373925_0037436 3300037068 Bacteria 3582
134 Ga0395905_0012147 3300037471 Bacteria 8297
135 Ga0436364_0966658 3300037853 Bacteria 266758
136 Ga0453683_0001389 3300044673 Bacteria 21016
137 Ga0466967_0009208 3300045976 Bacteria 7311
138 Ga0466967_0016324 3300045976 Bacteria 5852
139 Ga0495592_0023602 3300046454 Bacteria 4679
140 Ga0495603_0006593 3300046455 Bacteria 6962
141 Ga0495629_0011328 3300046459 Bacteria 6477
142 Ga0495653_0000271 3300046463 Bacteria 41959
143 Ga0495580_0036259 3300046472 Bacteria 3541
144 Ga0495594_0005986 3300046499 Bacteria 6247
145 Ga0495608_0000232 3300046511 Bacteria 40250
146 Ga0495628_0000358 3300046516 Bacteria 41642
147 Ga0495630_0011306 3300046517 Bacteria 6456
148 Ga0495630_0027166 3300046517 Bacteria 4242
149 Ga0495643_0000033 3300046522 Bacteria 251940
150 Ga0495666_0013393 3300046526 Bacteria 4089
151 Ga0495652_0001223 3300046529 Bacteria 28803
152 Ga0495652_0005995 3300046529 Bacteria 11367
153 Ga0495665_0000216 3300046531 Bacteria 29055
154 Ga0495665_0010607 3300046531 Bacteria 4989
155 Ga0495640_0022306 3300046533 Bacteria 4629
156 Ga0495586_0008628 3300046535 Bacteria 5425
157 Ga0495587_0000229 3300046536 Bacteria 41448
158 Ga0495587_0002341 3300046536 Bacteria 12667
159 Ga0495587_0005050 3300046536 Bacteria 8634
160 Ga0495645_0000060 3300046543 Bacteria 79142
161 Ga0495645_0001851 3300046543 Bacteria 14361
162 Ga0495645_0025734 3300046543 Bacteria 4273
163 Ga0495667_0000613 3300046559 Bacteria 22755
164 Ga0495667_0005755 3300046559 Bacteria 8393
165 Ga0495667_0015883 3300046559 Bacteria 5090
166 Ga0495635_0000260 3300046663 Bacteria 33902
167 Ga0495657_0000794 3300046675 Bacteria 28070
168 Ga0495599_0000280 3300046678 Bacteria 31273
169 Ga0495623_0000151 3300046679 Bacteria 42876
170 Ga0495646_0000547 3300046680 Bacteria 20285
171 Ga0495658_0000058 3300046683 Bacteria 56027
172 Ga0495613_0027099 3300046689 Bacteria 4264
173 Ga0495600_0000207 3300046809 Bacteria 33867
174 Ga0495581_0001291 3300047315 Bacteria 13815
175 Ga0495604_0000494 3300047317 Bacteria 34628
176 Ga0495674_0003129 3300047319 Bacteria 16074
177 Ga0495672_0003255 3300047320 Bacteria 14081
178 Ga0495675_0007177 3300047444 Bacteria 6862
179 Ga0495684_0000428 3300047471 Bacteria 34287
180 Ga0495684_0005528 3300047471 Bacteria 9846
181 Ga0495684_0024146 3300047471 Bacteria 4678
182 Ga0495602_0000545 3300048088 Bacteria 35134
183 Ga0495614_0000105 3300048089 Bacteria 28798
184 Ga0496112_0000846 3300048915 Bacteria 21835
185 Ga0501033_0003489 3300049570 Bacteria 12899
186 Ga0501034_0043933 3300049571 Bacteria 4520
187 Ga0501079_0016820 3300049741 Bacteria 5584
188 Ga0501080_0044348 3300049742 Bacteria 4140
189 Ga0501035_0000235 3300049822 Bacteria 66141
190 nmdc:mga05p37_39782_c1 3300050507 Bacteria 5773
191 nmdc:mga08y16_4576_c1 3300050511 Bacteria 14416
192 nmdc:mga0n895_10248_c1 3300050512 Bacteria 8259
193 Ga0495601_0006746 3300053077 Bacteria 6723
194 Ga0495612_0008563 3300053078 Bacteria 4149
195 Ga0070717_10011723
196 Ga0070658_10000511
197 Ga0070658_10006717
198 Ga0070658_10017092
199 Ga0070676_10018065
200 Ga0070683_100002601
201 Ga0070683_100014702
202 Ga0070683_100015924
203 Ga0070683_100034421
204 Ga0070680_100000356
205 Ga0070680_100002464
206 Ga0070680_100002688
207 Ga0070660_100002319
208 Ga0070689_100005981
209 Ga0070668_100003504
210 Ga0070671_100003013
211 Ga0070673_100016255
212 Ga0070688_100006325
213 Ga0070659_100013882
214 Ga0070709_10002132
215 Ga0070709_10003323
216 Ga0070714_100004190
217 Ga0070714_100004320
218 Ga0070713_100006924
219 Ga0070711_100000155
220 Ga0070711_100001205
221 Ga0070694_100021872
222 Ga0070708_100000022
223 Ga0070708_100000473
224 Ga0070681_10001408
225 Ga0068867_100033216
226 Ga0070707_100022084
227 Ga0070698_100012927
228 Ga0070698_100090464
229 Ga0070679_100000085
230 Ga0070679_100002972
231 Ga0070679_100021808
232 Ga0070684_100002564
233 Ga0070684_100011451
234 Ga0070697_100002514
235 Ga0070686_100038884
236 Ga0068855_100024708
237 Ga0068855_100076398
238 Ga0068856_100007088
239 Ga0068859_100002145
240 Ga0068858_100025089
241 Ga0081539_10000091
242 Ga0097621_100001246
243 Ga0075431_100008663
244 Ga0075434_100019830
245 Ga0097620_100002145
246 Ga0111539_10002788
247 Ga0105241_10006407
248 Ga0105248_10006676
249 Ga0105248_10021774
250 Ga0105239_10004607
251 Ga0157371_10020313
252 Ga0157371_10023051
253 Ga0157370_10013624
254 Ga0157370_10041473
255 Ga0157369_10003813
256 Ga0157372_10001350
257 Ga0157372_10002140
258 Ga0157372_10003048
259 Ga0157372_10028653
260 Ga0157372_10029650
261 Ga0157372_10058271
262 Ga0157375_10020079
263 Ga0157377_10001708
264 Ga0157376_10003170
265 Ga0213875_10000072
266 Ga0207682_10009584
267 Ga0207643_10002137
268 Ga0207705_10002652
269 Ga0207705_10005630
270 Ga0207695_10005205
271 Ga0207663_10000428
272 Ga0207663_10020062
273 Ga0207660_10000558
274 Ga0207660_10006498
275 Ga0207660_10015991
276 Ga0207657_10000648
277 Ga0207652_10000799
278 Ga0207652_10005164
279 Ga0207652_10010848
280 Ga0207659_10005934
281 Ga0207700_10022224
282 Ga0207700_10025952
283 Ga0207664_10001448
284 Ga0207664_10041364
285 Ga0207661_10000242
286 Ga0207661_10004050
287 Ga0207661_10005791
288 Ga0207661_10011172
289 Ga0207661_10055446
290 Ga0207679_10011815
291 Ga0207651_10021267
292 Ga0207648_10005926
293 Ga0207674_10000387
294 Ga0207674_10006944
295 Ga0207674_10008116
296 Ga0207698_10026037
297 Ga0316575_10006851
298 Ga0316579_10013774
299 Ga0307405_10012288
300 Ga0307405_10014452
301 Ga0307413_10012635
302 Ga0307413_10025112
303 Ga0307413_10038081
304 Ga0307407_10013569
305 Ga0307412_10035027
306 Ga0307409_100012492
307 Ga0307409_100047248
308 Ga0307416_100023687
309 Ga0307415_100015721
310 Ga0373934_0000408
311 Ga0373934_0001745
312 Ga0373923_0000248
313 Ga0373957_0002004
314 Ga0373957_0005269
315 Ga0373943_0001362
316 Ga0373943_0006126
317 Ga0373946_0010561
318 Ga0373955_0002177
319 Ga0373927_0003058
320 Ga0373927_0009832
321 Ga0373933_0000183
322 Ga0373933_0005572
323 Ga0373947_0000262
324 Ga0373937_0000101
325 Ga0373937_0000533
326 Ga0373925_0023815
327 Ga0373925_0037436
328 Ga0395905_0012147
329 Ga0436364_0966658
330 Ga0453683_0001389
331 Ga0466967_0009208
332 Ga0466967_0016324
333 Ga0495592_0023602
334 Ga0495603_0006593
335 Ga0495629_0011328
336 Ga0495653_0000271
337 Ga0495580_0036259
338 Ga0495594_0005986
339 Ga0495608_0000232
340 Ga0495628_0000358
341 Ga0495630_0011306
342 Ga0495630_0027166
343 Ga0495643_0000033
344 Ga0495666_0013393
345 Ga0495652_0001223
346 Ga0495652_0005995
347 Ga0495665_0000216
348 Ga0495665_0010607
349 Ga0495640_0022306
350 Ga0495586_0008628
351 Ga0495587_0000229
352 Ga0495587_0002341
353 Ga0495587_0005050
354 Ga0495645_0000060
355 Ga0495645_0001851
356 Ga0495645_0025734
357 Ga0495667_0000613
358 Ga0495667_0005755
359 Ga0495667_0015883
360 Ga0495635_0000260
361 Ga0495657_0000794
362 Ga0495599_0000280
363 Ga0495623_0000151
364 Ga0495646_0000547
365 Ga0495658_0000058
366 Ga0495613_0027099
367 Ga0495600_0000207
368 Ga0495581_0001291
369 Ga0495604_0000494
370 Ga0495674_0003129
371 Ga0495672_0003255
372 Ga0495675_0007177
373 Ga0495684_0000428
374 Ga0495684_0005528
375 Ga0495684_0024146
376 Ga0495602_0000545
377 Ga0495614_0000105
378 Ga0496112_0000846
379 Ga0501033_0003489
380 Ga0501034_0043933
381 Ga0501079_0016820
382 Ga0501080_0044348
383 Ga0501035_0000235
384 nmdc:mga05p37_39782_c1
385 nmdc:mga08y16_4576_c1
386 nmdc:mga0n895_10248_c1
387 Ga0495601_0006746
388 Ga0495612_0008563

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
8etw-assembly1.cif.gz_Q class3 of ino80-hexasome complex 0.8158 213 342
2p6n-assembly1.cif.gz_A human dead-box rna helicase ddx41, helicase domain 0.7687 197 349
5jxt-assembly1.cif.gz_P crystal structure of mtiswi bound with histone h4 tail 0.7562 208 342
6icz-assembly1.cif.gz_Y cryo-em structure of a human post-catalytic spliceosome (p complex) at 3.0 angstrom 0.7517 32 621
5xjc-assembly1.cif.gz_Y cryo-em structure of the human spliceosome just prior to exon ligation at 3.6 angstrom 0.7517 32 621
ID Description Score Start End Superfamily
af_O94536_981_1080_1.20.120.1080 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.9101 387 434 1.20.120.1080
af_Q4DFY7_567_725_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8184 209 346 3.40.50.300
af_F4I9Q5_1078_1180_1.20.120.1080 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.7988 387 447 1.20.120.1080
af_Q9FT69_484_600_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.792 224 342 3.40.50.300
af_P37024_371_482_1.20.120.1080 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.7809 387 448 1.20.120.1080
ID Description Score Start End GO Terms
AF-A0A7V9TJN6-F1-model_v4 DEAD/DEAH box helicase 0.9439 1 231 GO:0004386
AF-A0A7V9TJN6-F1-model_v4 DEAD/DEAH box helicase 0.94 1 231 GO:0004386
AF-A0A7V4NKG0-F1-model_v4 DEAD/DEAH box helicase 0.8466 1 889 GO:0003723
GO:0004386
GO:0005524
GO:0016787
AF-A0A7V4NKG0-F1-model_v4 DEAD/DEAH box helicase 0.843 1 889 GO:0003723
GO:0004386
GO:0005524
GO:0016787
AF-A0A7T9BCM8-F1-model_v4 deleted 0.8375 2 889

Map