F295910

General Info

Members Datasets Scaffolds Average Seq Length
192 140 384 176

Family's Representative Sequence

Representative Sequence 3300035086|Ga0373934_0279177|Ga0373934_0279177_85_669
Length 194
Sequence MEGLGSKPHDHRIPGGSLEVVDTSSLRELVRDIPDWPQPGIVFRDITPLLAASDAFALAVDALAAPYGDEPIDKVFGVEARGFVFAAPLAYRRGAGFVPVRKAGKLPWDIEREEYALEYGSDLLEVHRDAVHPGERVLIVDDVIATGGTAAATARLVERLGGTVVGFTFLLELVALGGRAQLDGRRVEAVLRYE

Samples

Sample ID Description Type Environment
1 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
79 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
80 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
89 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
90 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
101 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
102 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
108 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.69
Nodule 0
Rhizoplane 9.38
Rhizosphere 81.25
Stem 0
Stem Tuber 0
Unclassified 2.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373934_0279177 3300035086 Bacteria 692
2 Ga0070683_100208427 3300005329 Bacteria 1856
3 Ga0070670_100621439 3300005331 Bacteria 968
4 Ga0070682_100021629 3300005337 Bacteria 3799
5 Ga0070660_100023170 3300005339 Bacteria 4599
6 Ga0070660_100524182 3300005339 Bacteria 987
7 Ga0070671_100751251 3300005355 Bacteria 848
8 Ga0070688_100229656 3300005365 Bacteria 1312
9 Ga0070714_100137253 3300005435 Bacteria 2191
10 Ga0070713_100225062 3300005436 Bacteria 1703
11 Ga0070705_100175743 3300005440 Bacteria 1446
12 Ga0070705_101195918 3300005440 Bacteria 626
13 Ga0070694_100898474 3300005444 Bacteria 731
14 Ga0070678_100925327 3300005456 Bacteria 798
15 Ga0070706_100517776 3300005467 Bacteria 1110
16 Ga0070707_100093624 3300005468 Bacteria 2909
17 Ga0070698_100927588 3300005471 Unclassified 817
18 Ga0070679_100190865 3300005530 Bacteria 2018
19 Ga0070684_101305049 3300005535 Bacteria 683
20 Ga0070686_100211082 3300005544 Bacteria 1398
21 Ga0070693_100126087 3300005547 Bacteria 1594
22 Ga0070704_100011060 3300005549 Bacteria 5510
23 Ga0068857_100191394 3300005577 Unclassified 1863
24 Ga0068861_100184057 3300005719 Bacteria 1741
25 Ga0070717_10131833 3300006028 Bacteria 2150
26 Ga0075368_10093137 3300006042 Bacteria 1233
27 Ga0075364_10024779 3300006051 Bacteria 3813
28 Ga0070712_100333301 3300006175 Bacteria 1237
29 Ga0075367_10260392 3300006178 Bacteria 1089
30 Ga0075428_100000040 3300006844 Bacteria 102788
31 Ga0075434_100088338 3300006871 Bacteria 3101
32 Ga0105240_12032462 3300009093 Bacteria 597
33 Ga0105245_10004737 3300009098 Bacteria 12012
34 Ga0105245_10007843 3300009098 Bacteria 9350
35 Ga0105245_10406369 3300009098 Bacteria 1362
36 Ga0114129_12177581 3300009147 Bacteria 667
37 Ga0105243_10041400 3300009148 Bacteria 3603
38 Ga0105243_10159003 3300009148 Bacteria 1946
39 Ga0105243_10579518 3300009148 Bacteria 1077
40 Ga0105243_10725418 3300009148 Bacteria 972
41 Ga0105242_10054384 3300009176 Bacteria 3272
42 Ga0105242_11099656 3300009176 Bacteria 809
43 Ga0105239_10199849 3300010375 Bacteria 2239
44 Ga0105246_10411899 3300011119 Bacteria 1125
45 Ga0105246_10673465 3300011119 Bacteria 903
46 Ga0157369_10661242 3300013105 Bacteria 1077
47 Ga0157378_11208753 3300013297 Bacteria 795
48 Ga0157375_10503441 3300013308 Bacteria 1375
49 Ga0157380_10482134 3300014326 Bacteria 1200
50 Ga0157380_10927882 3300014326 Bacteria 899
51 Ga0157380_12096193 3300014326 Bacteria 628
52 Ga0157379_10803019 3300014968 Bacteria 888
53 Ga0157376_11138910 3300014969 Bacteria 807
54 Ga0163161_10638401 3300017792 Bacteria 881
55 Ga0213876_10150543 3300021384 Bacteria 1237
56 Ga0213875_10173906 3300021388 Bacteria 1011
57 Ga0207688_10712459 3300025901 Bacteria 635
58 Ga0207699_10293188 3300025906 Bacteria 1134
59 Ga0207654_10249182 3300025911 Bacteria 1190
60 Ga0207657_10126742 3300025919 Bacteria 2096
61 Ga0207657_10376313 3300025919 Bacteria 1119
62 Ga0207652_10420959 3300025921 Bacteria 1205
63 Ga0207646_10130820 3300025922 Bacteria 2258
64 Ga0207687_10001924 3300025927 Bacteria 14295
65 Ga0207687_10109714 3300025927 Bacteria 2045
66 Ga0207700_10212555 3300025928 Bacteria 1636
67 Ga0207664_10082037 3300025929 Bacteria 2626
68 Ga0207686_10122608 3300025934 Bacteria 1771
69 Ga0207686_10343562 3300025934 Bacteria 1122
70 Ga0207709_10056513 3300025935 Bacteria 2429
71 Ga0207709_10364991 3300025935 Bacteria 1094
72 Ga0207661_10447591 3300025944 Bacteria 1176
73 Ga0207667_11082266 3300025949 Bacteria 786
74 Ga0207668_10297006 3300025972 Bacteria 1332
75 Ga0207708_10170522 3300026075 Bacteria 1723
76 Ga0207674_10835581 3300026116 Unclassified 888
77 Ga0207675_100124707 3300026118 Bacteria 2439
78 Ga0265334_10210126 3300028573 Bacteria 674
79 Ga0265338_10000266 3300028800 Bacteria 95213
80 Ga0265338_10050843 3300028800 Bacteria 3741
81 Ga0265338_10203833 3300028800 Bacteria 1490
82 Ga0265325_10006550 3300031241 Bacteria 7062
83 Ga0265339_10011524 3300031249 Bacteria 5438
84 Ga0265327_10010185 3300031251 Bacteria 6643
85 Ga0265327_10067670 3300031251 Bacteria 1799
86 Ga0265327_10094607 3300031251 Bacteria 1452
87 Ga0265316_10369736 3300031344 Bacteria 1036
88 Ga0265316_10383916 3300031344 Bacteria 1013
89 Ga0265313_10000511 3300031595 Bacteria 40655
90 Ga0265314_10331396 3300031711 Bacteria 844
91 Ga0265314_10599105 3300031711 Bacteria 568
92 Ga0307405_10466510 3300031731 Bacteria 1005
93 Ga0307410_10009049 3300031852 Bacteria 5563
94 Ga0307410_10020208 3300031852 Bacteria 4069
95 Ga0307407_10204521 3300031903 Bacteria 1325
96 Ga0307409_100011591 3300031995 Bacteria 5570
97 Ga0307409_100152047 3300031995 Bacteria 2011
98 Ga0307416_100017656 3300032002 Bacteria 5001
99 Ga0307411_10783663 3300032005 Bacteria 838
100 Ga0307415_100122279 3300032126 Bacteria 1954
101 Ga0373930_0008712 3300034816 Bacteria 1779
102 Ga0373948_0021045 3300034817 Bacteria 1246
103 Ga0373932_0000778 3300035112 Bacteria 9456
104 Ga0373955_0424490 3300035172 Bacteria 809
105 Ga0373931_0000001 3300035691 Bacteria 634029
106 Ga0373931_0000019 3300035691 Bacteria 186534
107 Ga0373937_0244985 3300036401 Bacteria 1689
108 Ga0373937_0488848 3300036401 Bacteria 1169
109 Ga0373937_1006017 3300036401 Bacteria 782
110 Ga0373925_0098829 3300037068 Bacteria 2241
111 Ga0436364_1267631 3300037853 Bacteria 2346
112 Ga0436365_0136940 3300039437 Bacteria 2073
113 Ga0436365_1007576 3300039437 Bacteria 1269
114 Ga0436365_1455322 3300039437 Bacteria 884
115 Ga0436363_1451788 3300039450 Bacteria 602
116 Ga0451802_2142117 3300041460 Unclassified 657
117 Ga0451847_0813021 3300041503 Bacteria 677
118 Ga0451849_0590818 3300041505 Bacteria 958
119 Ga0466966_0050836 3300044684 Bacteria 2636
120 Ga0466961_0114655 3300044693 Bacteria 1694
121 Ga0495629_0040537 3300046459 Bacteria 3276
122 Ga0495629_0144182 3300046459 Bacteria 1657
123 Ga0495629_0184464 3300046459 Bacteria 1445
124 Ga0495651_0009077 3300046462 Bacteria 7632
125 Ga0495653_0188269 3300046463 Bacteria 1410
126 Ga0495653_0239884 3300046463 Bacteria 1209
127 Ga0495608_0326170 3300046511 Bacteria 948
128 Ga0495608_0364126 3300046511 Bacteria 888
129 Ga0495618_0053458 3300046514 Bacteria 2554
130 Ga0495628_0514265 3300046516 Bacteria 863
131 Ga0495628_0990817 3300046516 Bacteria 579
132 Ga0495630_0017935 3300046517 Bacteria 5193
133 Ga0495630_0076433 3300046517 Bacteria 2523
134 Ga0495652_0197992 3300046529 Bacteria 1527
135 Ga0495640_0043260 3300046533 Bacteria 3138
136 Ga0495587_0148399 3300046536 Bacteria 1337
137 Ga0495587_0239684 3300046536 Bacteria 1021
138 Ga0495645_0168886 3300046543 Bacteria 1507
139 Ga0495667_0006391 3300046559 Bacteria 7987
140 Ga0495667_0013677 3300046559 Bacteria 5484
141 Ga0495634_0123759 3300046642 Bacteria 1654
142 Ga0495635_0271016 3300046663 Bacteria 1142
143 Ga0495657_0022440 3300046675 Bacteria 4519
144 Ga0495646_0137748 3300046680 Bacteria 1368
145 Ga0495613_0014503 3300046689 Bacteria 5846
146 Ga0495613_0090444 3300046689 Bacteria 2217
147 Ga0495624_0054618 3300046690 Bacteria 2518
148 Ga0495604_0017792 3300047317 Bacteria 5686
149 Ga0495674_0427159 3300047319 Bacteria 1067
150 Ga0495674_0863241 3300047319 Bacteria 700
151 Ga0495676_0094434 3300047321 Bacteria 2228
152 Ga0495680_0022088 3300047322 Bacteria 5314
153 Ga0495680_0171008 3300047322 Bacteria 1573
154 Ga0495675_0042054 3300047444 Bacteria 2911
155 Ga0495684_0144473 3300047471 Bacteria 1783
156 Ga0495684_0186275 3300047471 Bacteria 1537
157 Ga0495684_0518883 3300047471 Bacteria 816
158 Ga0496101_0546387 3300048904 Bacteria 916
159 Ga0496102_1066415 3300048905 Bacteria 728
160 Ga0496104_0612261 3300048907 Bacteria 999
161 Ga0496105_0139148 3300048908 Bacteria 1999
162 Ga0496106_0951481 3300048909 Bacteria 677
163 Ga0496108_0453604 3300048911 Bacteria 1120
164 Ga0496109_0022791 3300048912 Bacteria 5549
165 Ga0496109_0418465 3300048912 Bacteria 1266
166 Ga0496109_1508520 3300048912 Bacteria 607
167 Ga0496110_0507830 3300048913 Bacteria 1097
168 Ga0496111_0214636 3300048914 Bacteria 1429
169 Ga0496111_0761095 3300048914 Bacteria 702
170 Ga0496112_0024812 3300048915 Bacteria 5750
171 Ga0496112_0025066 3300048915 Bacteria 5722
172 Ga0496112_0830972 3300048915 Bacteria 848
173 Ga0496114_0572556 3300048917 Bacteria 997
174 Ga0496115_0096824 3300048918 Bacteria 2417
175 Ga0501068_0424251 3300049584 Bacteria 859
176 Ga0501071_1259589 3300049587 Bacteria 571
177 Ga0501073_0312160 3300049589 Bacteria 1085
178 Ga0501077_0773733 3300049593 Bacteria 617
179 nmdc:mga00v17_31101_c1 3300050491 Bacteria 3146
180 nmdc:mga0yw44_1097_c1 3300050492 Bacteria 10402
181 nmdc:mga0yw44_5265_c1 3300050492 Bacteria 6073
182 nmdc:mga0yw44_564419_c1 3300050492 Bacteria 773
183 nmdc:mga06z11_319385_c1 3300050494 Bacteria 926
184 nmdc:mga0rr50_509574_c1 3300050513 Bacteria 1023
185 Ga0495601_0040919 3300053077 Bacteria 2904
186 Ga0495601_0205501 3300053077 Bacteria 1287
187 Ga0495601_0692282 3300053077 Bacteria 651
188 Ga0495595_0064673 3300053084 Bacteria 1720
189 Ga0495595_0085612 3300053084 Bacteria 1507
190 Ga0495619_0182414 3300053085 Bacteria 1452
191 Ga0495619_0806780 3300053085 Bacteria 635
192 Ga0500566_0159530 3300053094 Bacteria 1177
193 Ga0373934_0279177
194 Ga0070683_100208427
195 Ga0070670_100621439
196 Ga0070682_100021629
197 Ga0070660_100023170
198 Ga0070660_100524182
199 Ga0070671_100751251
200 Ga0070688_100229656
201 Ga0070714_100137253
202 Ga0070713_100225062
203 Ga0070705_100175743
204 Ga0070705_101195918
205 Ga0070694_100898474
206 Ga0070678_100925327
207 Ga0070706_100517776
208 Ga0070707_100093624
209 Ga0070698_100927588
210 Ga0070679_100190865
211 Ga0070684_101305049
212 Ga0070686_100211082
213 Ga0070693_100126087
214 Ga0070704_100011060
215 Ga0068857_100191394
216 Ga0068861_100184057
217 Ga0070717_10131833
218 Ga0075368_10093137
219 Ga0075364_10024779
220 Ga0070712_100333301
221 Ga0075367_10260392
222 Ga0075428_100000040
223 Ga0075434_100088338
224 Ga0105240_12032462
225 Ga0105245_10004737
226 Ga0105245_10007843
227 Ga0105245_10406369
228 Ga0114129_12177581
229 Ga0105243_10041400
230 Ga0105243_10159003
231 Ga0105243_10579518
232 Ga0105243_10725418
233 Ga0105242_10054384
234 Ga0105242_11099656
235 Ga0105239_10199849
236 Ga0105246_10411899
237 Ga0105246_10673465
238 Ga0157369_10661242
239 Ga0157378_11208753
240 Ga0157375_10503441
241 Ga0157380_10482134
242 Ga0157380_10927882
243 Ga0157380_12096193
244 Ga0157379_10803019
245 Ga0157376_11138910
246 Ga0163161_10638401
247 Ga0213876_10150543
248 Ga0213875_10173906
249 Ga0207688_10712459
250 Ga0207699_10293188
251 Ga0207654_10249182
252 Ga0207657_10126742
253 Ga0207657_10376313
254 Ga0207652_10420959
255 Ga0207646_10130820
256 Ga0207687_10001924
257 Ga0207687_10109714
258 Ga0207700_10212555
259 Ga0207664_10082037
260 Ga0207686_10122608
261 Ga0207686_10343562
262 Ga0207709_10056513
263 Ga0207709_10364991
264 Ga0207661_10447591
265 Ga0207667_11082266
266 Ga0207668_10297006
267 Ga0207708_10170522
268 Ga0207674_10835581
269 Ga0207675_100124707
270 Ga0265334_10210126
271 Ga0265338_10000266
272 Ga0265338_10050843
273 Ga0265338_10203833
274 Ga0265325_10006550
275 Ga0265339_10011524
276 Ga0265327_10010185
277 Ga0265327_10067670
278 Ga0265327_10094607
279 Ga0265316_10369736
280 Ga0265316_10383916
281 Ga0265313_10000511
282 Ga0265314_10331396
283 Ga0265314_10599105
284 Ga0307405_10466510
285 Ga0307410_10009049
286 Ga0307410_10020208
287 Ga0307407_10204521
288 Ga0307409_100011591
289 Ga0307409_100152047
290 Ga0307416_100017656
291 Ga0307411_10783663
292 Ga0307415_100122279
293 Ga0373930_0008712
294 Ga0373948_0021045
295 Ga0373932_0000778
296 Ga0373955_0424490
297 Ga0373931_0000001
298 Ga0373931_0000019
299 Ga0373937_0244985
300 Ga0373937_0488848
301 Ga0373937_1006017
302 Ga0373925_0098829
303 Ga0436364_1267631
304 Ga0436365_0136940
305 Ga0436365_1007576
306 Ga0436365_1455322
307 Ga0436363_1451788
308 Ga0451802_2142117
309 Ga0451847_0813021
310 Ga0451849_0590818
311 Ga0466966_0050836
312 Ga0466961_0114655
313 Ga0495629_0040537
314 Ga0495629_0144182
315 Ga0495629_0184464
316 Ga0495651_0009077
317 Ga0495653_0188269
318 Ga0495653_0239884
319 Ga0495608_0326170
320 Ga0495608_0364126
321 Ga0495618_0053458
322 Ga0495628_0514265
323 Ga0495628_0990817
324 Ga0495630_0017935
325 Ga0495630_0076433
326 Ga0495652_0197992
327 Ga0495640_0043260
328 Ga0495587_0148399
329 Ga0495587_0239684
330 Ga0495645_0168886
331 Ga0495667_0006391
332 Ga0495667_0013677
333 Ga0495634_0123759
334 Ga0495635_0271016
335 Ga0495657_0022440
336 Ga0495646_0137748
337 Ga0495613_0014503
338 Ga0495613_0090444
339 Ga0495624_0054618
340 Ga0495604_0017792
341 Ga0495674_0427159
342 Ga0495674_0863241
343 Ga0495676_0094434
344 Ga0495680_0022088
345 Ga0495680_0171008
346 Ga0495675_0042054
347 Ga0495684_0144473
348 Ga0495684_0186275
349 Ga0495684_0518883
350 Ga0496101_0546387
351 Ga0496102_1066415
352 Ga0496104_0612261
353 Ga0496105_0139148
354 Ga0496106_0951481
355 Ga0496108_0453604
356 Ga0496109_0022791
357 Ga0496109_0418465
358 Ga0496109_1508520
359 Ga0496110_0507830
360 Ga0496111_0214636
361 Ga0496111_0761095
362 Ga0496112_0024812
363 Ga0496112_0025066
364 Ga0496112_0830972
365 Ga0496114_0572556
366 Ga0496115_0096824
367 Ga0501068_0424251
368 Ga0501071_1259589
369 Ga0501073_0312160
370 Ga0501077_0773733
371 nmdc:mga00v17_31101_c1
372 nmdc:mga0yw44_1097_c1
373 nmdc:mga0yw44_5265_c1
374 nmdc:mga0yw44_564419_c1
375 nmdc:mga06z11_319385_c1
376 nmdc:mga0rr50_509574_c1
377 Ga0495601_0040919
378 Ga0495601_0205501
379 Ga0495601_0692282
380 Ga0495595_0064673
381 Ga0495595_0085612
382 Ga0495619_0182414
383 Ga0495619_0806780
384 Ga0500566_0159530

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00156

Pribosyltran

Phosphoribosyl transferase domain

49

181

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lza-assembly1.cif.gz_B crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.9794 10 178
4m0k-assembly2.cif.gz_D crystal structure of adenine phosphoribosyltransferase from rhodothermus marinus dsm 4252, nysgrc target 029775. 0.9706 6 178
6fd6-assembly1.cif.gz_B crystal structure of human aprt-tyr105phe variant in complex with adenine, prpp and mg2+, 30 days post crystallization (with amp and ppi products fully generated) 0.9647 7 178
4lza-assembly1.cif.gz_A crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.9621 10 178
4x44-assembly1.cif.gz_A-2 crystal structure of mutant r89q of human adenine phosphoribosyltransferase 0.9615 9 178
ID Description Score Start End Superfamily
af_P69503_1_183_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9719 3 178 3.40.50.2020
af_P9WQ07_33_212_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9653 9 178 3.40.50.2020
af_P69503_1_183_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9559 3 178 3.40.50.2020
4m0kC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9556 6 178 3.40.50.2020
4m0kC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9449 6 178 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A7J8Q206-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.9915 86 178 GO:0003999
GO:0005829
GO:0006166
AF-A0A849EMC6-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.991 74 178 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209
AF-A0A7J4CZX2-F1-model_v4 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.9906 61 178 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209
AF-A0A7V3HIV9-F1-model_v4 Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7) 0.9891 13 178 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209
AF-A0A3D0D0R3-F1-model_v4 Adenine phosphoribosyltransferase (APRT) (EC 2.4.2.7) 0.9886 11 178 GO:0002055
GO:0003999
GO:0005737
GO:0006166
GO:0006168
GO:0016208
GO:0044209

Map