F292150

General Info

Members Datasets Scaffolds Average Seq Length
190 149 380 328

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100427901|Ga0070679_1004279012
Length 317
Sequence MGQPRASYFDTSTWHRDDVVSGGARLIPITTPVGEFRVWTKRVGNNPDLKVLLLHGGPGATDELYECVDVWFPGAGIEYYYYDQLGSFRSDQPDEPSLWDLDRFVDEVEQVRRALHLDRGNFVLLGQSWGGLLAMEYAVHHQQHLKGLVISNMMSSAPAYNAYAHDVLMPTMDQQVLAEIQQLEKEGDTGERYELLLMEHHYELHVCRMPFADWPDPARRAIAHMNPAIYVPMQGPSELGLSGTLESWDRSADLKDIDVPTLVIGATHDTMDPAHMQWMAEQLPQGRYLHCPDGSHMSQFDDPEHYFPGLLDFLASL

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
89 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
94 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
99 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
100 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
103 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
113 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
118 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
126 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
146 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 2739367866 Hymenobacter sp. YR204 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.42
Metatranscriptomes 1.05
Isolates 0.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.68
Nodule 0
Rhizoplane 5.26
Rhizosphere 88.95
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100427901 3300005530 Bacteria 1269
2 JGI25162J39368_1000020 3300002737 Bacteria 254723
3 rootH2_10008540 3300003320 Bacteria 24326
4 Ga0065714_10086708 3300005288 Bacteria 2090
5 Ga0065715_10164487 3300005293 Bacteria 1599
6 Ga0070683_100064943 3300005329 Bacteria 3398
7 Ga0070683_100254542 3300005329 Bacteria 1670
8 Ga0068868_100006352 3300005338 Bacteria 8358
9 Ga0070691_10007647 3300005341 Bacteria 4952
10 Ga0070692_10137154 3300005345 Bacteria 1381
11 Ga0070668_100376588 3300005347 Bacteria 1207
12 Ga0070669_100029056 3300005353 Bacteria 3984
13 Ga0070673_100113812 3300005364 Bacteria 2247
14 Ga0070667_100004168 3300005367 Bacteria 12215
15 Ga0070700_100020215 3300005441 Bacteria 3853
16 Ga0070708_100033070 3300005445 Bacteria 4491
17 Ga0070708_100198248 3300005445 Bacteria 1879
18 Ga0070681_10000020 3300005458 Bacteria 123918
19 Ga0070707_100023478 3300005468 Bacteria 5834
20 Ga0070707_100263434 3300005468 Bacteria 1676
21 Ga0070707_100270597 3300005468 Bacteria 1652
22 Ga0070698_100031552 3300005471 Bacteria 5492
23 Ga0070698_100109703 3300005471 Bacteria 2726
24 Ga0070698_100188682 3300005471 Bacteria 1999
25 Ga0070699_100038176 3300005518 Bacteria 4159
26 Ga0070699_100102320 3300005518 Bacteria 2512
27 Ga0070679_100000044 3300005530 Bacteria 94029
28 Ga0070697_100005971 3300005536 Bacteria 9412
29 Ga0070697_100061287 3300005536 Bacteria 3068
30 Ga0070686_100140131 3300005544 Bacteria 1682
31 Ga0070695_100039890 3300005545 Unclassified 2970
32 Ga0070696_100005583 3300005546 Bacteria 8398
33 Ga0070696_100187245 3300005546 Bacteria 1539
34 Ga0070704_100043508 3300005549 Bacteria 3113
35 Ga0068854_100022980 3300005578 Bacteria 4255
36 Ga0070702_100004212 3300005615 Bacteria 6544
37 Ga0068859_100041022 3300005617 Bacteria 4649
38 Ga0068864_100019222 3300005618 Bacteria 5710
39 Ga0068864_100045023 3300005618 Bacteria 3785
40 Ga0068861_100004854 3300005719 Bacteria 9044
41 Ga0068861_100405532 3300005719 Bacteria 1211
42 Ga0068863_100195844 3300005841 Bacteria 1942
43 Ga0068858_100031441 3300005842 Bacteria 4930
44 Ga0068860_100003282 3300005843 Bacteria 16650
45 Ga0068862_100135160 3300005844 Bacteria 2185
46 Ga0070717_10081229 3300006028 Bacteria 2721
47 Ga0070717_10084089 3300006028 Bacteria 2677
48 Ga0070716_100001013 3300006173 Bacteria 12295
49 Ga0068871_100006720 3300006358 Bacteria 8164
50 Ga0075434_100037779 3300006871 Bacteria 4780
51 Ga0068865_100059247 3300006881 Bacteria 2677
52 Ga0097620_100041023 3300006931 Bacteria 4649
53 Ga0105245_10004667 3300009098 Bacteria 12108
54 Ga0105242_10145856 3300009176 Bacteria 2059
55 Ga0105248_10012597 3300009177 Bacteria 9330
56 Ga0105248_10293104 3300009177 Bacteria 1832
57 Ga0105237_10030119 3300009545 Bacteria 5514
58 Ga0105239_10000178 3300010375 Bacteria 92196
59 Ga0105239_10007193 3300010375 Bacteria 12796
60 Ga0157369_10002377 3300013105 Bacteria 22613
61 Ga0163162_10003887 3300013306 Bacteria 14338
62 Ga0157372_10035706 3300013307 Bacteria 5473
63 Ga0163163_10002794 3300014325 Bacteria 14749
64 Ga0157380_10037870 3300014326 Bacteria 3740
65 Ga0157379_10005830 3300014968 Bacteria 10590
66 Ga0157376_10001413 3300014969 Bacteria 15778
67 Ga0163161_10012710 3300017792 Bacteria 5848
68 Ga0163161_10127032 3300017792 Bacteria 1921
69 Ga0197907_10921366 3300020069 Bacteria 4809
70 Ga0206355_1460685 3300020076 Bacteria 1675
71 Ga0209437_100085 3300025233 Bacteria 254790
72 Ga0209129_1013697 3300025258 Bacteria 1770
73 Ga0207692_10038482 3300025898 Bacteria 2346
74 Ga0207688_10084852 3300025901 Bacteria 1813
75 Ga0207680_10007726 3300025903 Bacteria 5257
76 Ga0207699_10005617 3300025906 Bacteria 6017
77 Ga0207645_10021439 3300025907 Bacteria 4213
78 Ga0207707_10000090 3300025912 Bacteria 90918
79 Ga0207671_10018123 3300025914 Bacteria 5409
80 Ga0207671_10034613 3300025914 Unclassified 3752
81 Ga0207660_10002266 3300025917 Bacteria 12677
82 Ga0207652_10001169 3300025921 Bacteria 23584
83 Ga0207652_10114813 3300025921 Bacteria 2392
84 Ga0207646_10024494 3300025922 Bacteria 5528
85 Ga0207646_10053484 3300025922 Bacteria 3612
86 Ga0207681_10010978 3300025923 Bacteria 5563
87 Ga0207681_10337604 3300025923 Bacteria 1203
88 Ga0207644_10048537 3300025931 Bacteria 3036
89 Ga0207690_10302521 3300025932 Bacteria 1252
90 Ga0207706_10065779 3300025933 Bacteria 3191
91 Ga0207686_10285968 3300025934 Bacteria 1219
92 Ga0207665_10014661 3300025939 Bacteria 5158
93 Ga0207711_10016845 3300025941 Bacteria 6069
94 Ga0207640_10148117 3300025981 Unclassified 1721
95 Ga0207677_10215896 3300026023 Bacteria 1535
96 Ga0207703_10006344 3300026035 Bacteria 9452
97 Ga0207702_10477427 3300026078 Bacteria 1213
98 Ga0207641_10056114 3300026088 Bacteria 3346
99 Ga0207648_10016185 3300026089 Bacteria 6825
100 Ga0207676_10022096 3300026095 Bacteria 4677
101 Ga0207676_10159334 3300026095 Bacteria 1953
102 Ga0207675_100008939 3300026118 Bacteria 9400
103 Ga0207675_100515861 3300026118 Bacteria 1191
104 Ga0268265_10143244 3300028380 Bacteria 2004
105 Ga0268264_10109862 3300028381 Bacteria 2413
106 Ga0307515_10000114 3300028794 Bacteria 194024
107 Ga0265325_10024414 3300031241 Bacteria 3290
108 Ga0265313_10060257 3300031595 Bacteria 1781
109 Ga0265342_10014989 3300031712 Bacteria 5120
110 Ga0316576_10195906 3300031727 Bacteria 1522
111 Ga0316576_10223689 3300031727 Bacteria 1415
112 Ga0316578_10037353 3300031728 Bacteria 2798
113 Ga0307415_100187708 3300032126 Bacteria 1628
114 Ga0307507_10001367 3300033179 Bacteria 54639
115 Ga0373954_0071956 3300035118 Bacteria 1644
116 Ga0373956_0058165 3300035119 Bacteria 1747
117 Ga0373956_0171002 3300035119 Bacteria 1025
118 Ga0373957_0046929 3300035120 Bacteria 1641
119 Ga0373955_0041410 3300035172 Bacteria 2469
120 Ga0373933_0022385 3300035724 Bacteria 3599
121 Ga0373933_0024534 3300035724 Bacteria 3452
122 Ga0373937_0007602 3300036401 Bacteria 9388
123 Ga0316582_0054720 3300036647 Bacteria 2542
124 Ga0316584_0173995 3300036712 Bacteria 1595
125 Ga0466969_0144461 3300044656 Bacteria 1099
126 Ga0466961_0033944 3300044693 Bacteria 3278
127 Ga0466963_0041093 3300044694 Bacteria 3032
128 Ga0466963_0094646 3300044694 Bacteria 2038
129 Ga0466964_0148875 3300044706 Bacteria 1083
130 Ga0466959_0172798 3300045049 Bacteria 1515
131 Ga0466958_0004699 3300045836 Bacteria 7250
132 Ga0466967_0088741 3300045976 Bacteria 2806
133 Ga0495638_0002157 3300046460 Bacteria 16522
134 Ga0495651_0175003 3300046462 Bacteria 1524
135 Ga0495585_0000156 3300046492 Bacteria 72941
136 Ga0495585_0066211 3300046492 Bacteria 1978
137 Ga0495596_0017548 3300046500 Bacteria 2960
138 Ga0495606_0011840 3300046507 Bacteria 7062
139 Ga0495616_0013936 3300046513 Bacteria 4517
140 Ga0495616_0030476 3300046513 Bacteria 2834
141 Ga0495632_0000969 3300046519 Bacteria 25051
142 Ga0495632_0021111 3300046519 Bacteria 3513
143 Ga0495643_0067482 3300046522 Bacteria 1884
144 Ga0495648_0005881 3300046524 Bacteria 10086
145 Ga0495648_0031876 3300046524 Unclassified 3467
146 Ga0495652_0039159 3300046529 Bacteria 4100
147 Ga0495667_0177578 3300046559 Bacteria 1367
148 Ga0495668_0000012 3300046616 Bacteria 458817
149 Ga0495668_0179000 3300046616 Bacteria 1161
150 Ga0495625_0001792 3300046660 Bacteria 24676
151 Ga0495625_0015778 3300046660 Bacteria 5964
152 Ga0495625_0055926 3300046660 Bacteria 2811
153 Ga0495661_0001086 3300046665 Bacteria 23886
154 Ga0495661_0007332 3300046665 Bacteria 7687
155 Ga0495661_0116104 3300046665 Bacteria 1485
156 Ga0495657_0151911 3300046675 Bacteria 1437
157 Ga0495623_0026653 3300046679 Bacteria 3719
158 Ga0495623_0121262 3300046679 Bacteria 1574
159 Ga0495646_0166248 3300046680 Bacteria 1218
160 Ga0495600_0276198 3300046809 Bacteria 1064
161 Ga0495680_0086390 3300047322 Bacteria 2360
162 Ga0495683_0040762 3300047323 Bacteria 2345
163 Ga0495675_0018371 3300047444 Bacteria 4438
164 Ga0495685_015118 3300047447 Bacteria 2630
165 Ga0495686_0000292 3300047472 Bacteria 87838
166 Ga0495602_0095589 3300048088 Bacteria 2452
167 Ga0495602_0182722 3300048088 Bacteria 1615
168 Ga0495626_0078916 3300048091 Bacteria 1465
169 Ga0496104_0001659 3300048907 Bacteria 19227
170 Ga0496104_0179411 3300048907 Bacteria 2028
171 Ga0496105_0023596 3300048908 Bacteria 4991
172 Ga0496105_0140670 3300048908 Bacteria 1986
173 Ga0496106_0061663 3300048909 Bacteria 2846
174 Ga0496108_0005692 3300048911 Bacteria 10087
175 Ga0496108_0052016 3300048911 Bacteria 3431
176 Ga0496109_0002996 3300048912 Bacteria 14108
177 Ga0496111_0004663 3300048914 Bacteria 8684
178 Ga0496112_0029346 3300048915 Bacteria 5319
179 Ga0495678_007947 3300049459 Bacteria 5433
180 Ga0501040_0006335 3300049576 Bacteria 7685
181 Ga0501041_0033419 3300049577 Unclassified 3112
182 Ga0501075_0047601 3300049591 Bacteria 3222
183 Ga0501045_0011560 3300049824 Bacteria 6200
184 nmdc:mga08y16_281144_c1 3300050511 Bacteria 1716
185 Ga0500635_0001679 3300053080 Bacteria 5354
186 Ga0500618_000061 3300053125 Bacteria 96180
187 Ga0500618_010604 3300053125 Bacteria 2469
188 Ga0500616_0069341 3300053153 Bacteria 1803
189 Ga0501084_0072847 3300054114 Bacteria 2877
190 2740034006 2739367866 Bacteria 4215900
191 Ga0070679_100427901
192 JGI25162J39368_1000020
193 rootH2_10008540
194 Ga0065714_10086708
195 Ga0065715_10164487
196 Ga0070683_100064943
197 Ga0070683_100254542
198 Ga0068868_100006352
199 Ga0070691_10007647
200 Ga0070692_10137154
201 Ga0070668_100376588
202 Ga0070669_100029056
203 Ga0070673_100113812
204 Ga0070667_100004168
205 Ga0070700_100020215
206 Ga0070708_100033070
207 Ga0070708_100198248
208 Ga0070681_10000020
209 Ga0070707_100023478
210 Ga0070707_100263434
211 Ga0070707_100270597
212 Ga0070698_100031552
213 Ga0070698_100109703
214 Ga0070698_100188682
215 Ga0070699_100038176
216 Ga0070699_100102320
217 Ga0070679_100000044
218 Ga0070697_100005971
219 Ga0070697_100061287
220 Ga0070686_100140131
221 Ga0070695_100039890
222 Ga0070696_100005583
223 Ga0070696_100187245
224 Ga0070704_100043508
225 Ga0068854_100022980
226 Ga0070702_100004212
227 Ga0068859_100041022
228 Ga0068864_100019222
229 Ga0068864_100045023
230 Ga0068861_100004854
231 Ga0068861_100405532
232 Ga0068863_100195844
233 Ga0068858_100031441
234 Ga0068860_100003282
235 Ga0068862_100135160
236 Ga0070717_10081229
237 Ga0070717_10084089
238 Ga0070716_100001013
239 Ga0068871_100006720
240 Ga0075434_100037779
241 Ga0068865_100059247
242 Ga0097620_100041023
243 Ga0105245_10004667
244 Ga0105242_10145856
245 Ga0105248_10012597
246 Ga0105248_10293104
247 Ga0105237_10030119
248 Ga0105239_10000178
249 Ga0105239_10007193
250 Ga0157369_10002377
251 Ga0163162_10003887
252 Ga0157372_10035706
253 Ga0163163_10002794
254 Ga0157380_10037870
255 Ga0157379_10005830
256 Ga0157376_10001413
257 Ga0163161_10012710
258 Ga0163161_10127032
259 Ga0197907_10921366
260 Ga0206355_1460685
261 Ga0209437_100085
262 Ga0209129_1013697
263 Ga0207692_10038482
264 Ga0207688_10084852
265 Ga0207680_10007726
266 Ga0207699_10005617
267 Ga0207645_10021439
268 Ga0207707_10000090
269 Ga0207671_10018123
270 Ga0207671_10034613
271 Ga0207660_10002266
272 Ga0207652_10001169
273 Ga0207652_10114813
274 Ga0207646_10024494
275 Ga0207646_10053484
276 Ga0207681_10010978
277 Ga0207681_10337604
278 Ga0207644_10048537
279 Ga0207690_10302521
280 Ga0207706_10065779
281 Ga0207686_10285968
282 Ga0207665_10014661
283 Ga0207711_10016845
284 Ga0207640_10148117
285 Ga0207677_10215896
286 Ga0207703_10006344
287 Ga0207702_10477427
288 Ga0207641_10056114
289 Ga0207648_10016185
290 Ga0207676_10022096
291 Ga0207676_10159334
292 Ga0207675_100008939
293 Ga0207675_100515861
294 Ga0268265_10143244
295 Ga0268264_10109862
296 Ga0307515_10000114
297 Ga0265325_10024414
298 Ga0265313_10060257
299 Ga0265342_10014989
300 Ga0316576_10195906
301 Ga0316576_10223689
302 Ga0316578_10037353
303 Ga0307415_100187708
304 Ga0307507_10001367
305 Ga0373954_0071956
306 Ga0373956_0058165
307 Ga0373956_0171002
308 Ga0373957_0046929
309 Ga0373955_0041410
310 Ga0373933_0022385
311 Ga0373933_0024534
312 Ga0373937_0007602
313 Ga0316582_0054720
314 Ga0316584_0173995
315 Ga0466969_0144461
316 Ga0466961_0033944
317 Ga0466963_0041093
318 Ga0466963_0094646
319 Ga0466964_0148875
320 Ga0466959_0172798
321 Ga0466958_0004699
322 Ga0466967_0088741
323 Ga0495638_0002157
324 Ga0495651_0175003
325 Ga0495585_0000156
326 Ga0495585_0066211
327 Ga0495596_0017548
328 Ga0495606_0011840
329 Ga0495616_0013936
330 Ga0495616_0030476
331 Ga0495632_0000969
332 Ga0495632_0021111
333 Ga0495643_0067482
334 Ga0495648_0005881
335 Ga0495648_0031876
336 Ga0495652_0039159
337 Ga0495667_0177578
338 Ga0495668_0000012
339 Ga0495668_0179000
340 Ga0495625_0001792
341 Ga0495625_0015778
342 Ga0495625_0055926
343 Ga0495661_0001086
344 Ga0495661_0007332
345 Ga0495661_0116104
346 Ga0495657_0151911
347 Ga0495623_0026653
348 Ga0495623_0121262
349 Ga0495646_0166248
350 Ga0495600_0276198
351 Ga0495680_0086390
352 Ga0495683_0040762
353 Ga0495675_0018371
354 Ga0495685_015118
355 Ga0495686_0000292
356 Ga0495602_0095589
357 Ga0495602_0182722
358 Ga0495626_0078916
359 Ga0496104_0001659
360 Ga0496104_0179411
361 Ga0496105_0023596
362 Ga0496105_0140670
363 Ga0496106_0061663
364 Ga0496108_0005692
365 Ga0496108_0052016
366 Ga0496109_0002996
367 Ga0496111_0004663
368 Ga0496112_0029346
369 Ga0495678_007947
370 Ga0501040_0006335
371 Ga0501041_0033419
372 Ga0501075_0047601
373 Ga0501045_0011560
374 nmdc:mga08y16_281144_c1
375 Ga0500635_0001679
376 Ga0500618_000061
377 Ga0500618_010604
378 Ga0500616_0069341
379 Ga0501084_0072847
380 2740034006

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

50

303

0.8

PF12146

Hydrolase_4

Serine aminopeptidase, S33

45

228

0.79

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

51

307

0.56

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wmr-assembly3.cif.gz_C crystal structure of vinj 0.9264 50 343
1xqx-assembly1.cif.gz_A crystal structure of f1-mutant s105a complex with pck 0.926 49 341
1xrp-assembly1.cif.gz_A crystal structure of active site f1-mutant e213q soaked with peptide pro-leu-gly-gly 0.9233 49 341
7a6g-assembly1.cif.gz_A structural characterization of l-proline amide hydrolase from pseudomonas syringae 0.9222 49 341
1mtz-assembly1.cif.gz_A crystal structure of the tricorn interacting factor f1 0.9197 46 341
ID Description Score Start End Superfamily
af_I6Y8X0_7_285_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9635 63 341 3.40.50.1820
af_I6Y8X0_7_285_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9333 63 341 3.40.50.1820
3wmrB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.925 50 343 3.40.50.1820
1xrpA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9233 49 341 3.40.50.1820
3wmrB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.91 50 343 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A350BVS3-F1-model_v4 Proline iminopeptidase 0.9927 52 347 GO:0004177
GO:0006508
GO:0016020
AF-A0A2N0VIL3-F1-model_v4 Proline iminopeptidase 0.9923 47 346 GO:0006508
GO:0008233
GO:0016020
AF-A0A524BIX1-F1-model_v4 Proline iminopeptidase 0.9909 49 342 GO:0004177
GO:0006508
AF-A0A7Y1UCG2-F1-model_v4 Proline iminopeptidase-family hydrolase 0.99 125 346 GO:0006508
GO:0008233
GO:0016020
AF-A0A4Q7P8J8-F1-model_v4 Proline iminopeptidase 0.9885 49 283 GO:0006508
GO:0008233
GO:0016020

Map